Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:21:02 (3790024): wrapper (7.7.26015): starting
14:21:02 (3790024): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 14:21:02] Arguments: --nthreads 12
[2025-11-22 14:21:02] Threads: 12
[2025-11-22 14:21:02] Checking for CVMFS
[2025-11-22 14:21:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 14:21:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 14:21:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 14:21:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 14:21:05] 2.11.5.0 394429 22900 186552 153187 3 308 37735483 45568001 23834 130560 0 200291923 99.765 137401671 22300 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-22 14:21:05] CVMFS is ok
[2025-11-22 14:21:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 14:21:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 14:21:05] Further information can be found at the LHC@home message board.
[2025-11-22 14:21:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 14:21:05] Checking for apptainer binary...
[2025-11-22 14:21:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 14:21:05] Running /usr/bin/apptainer --version
[2025-11-22 14:21:05] apptainer version 1.4.1-1.el9
[2025-11-22 14:21:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 14:21:07] wns0074.triumf.lcg
[2025-11-22 14:21:07] apptainer works
[2025-11-22 14:21:07] Set ATHENA_PROC_NUMBER=12
[2025-11-22 14:21:07] Set ATHENA_CORE_NUMBER=12
[2025-11-22 14:21:07] Starting ATLAS job with PandaID=6895339655
[2025-11-22 14:21:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 14:30:20]  *** The last 200 lines of the pilot log: ***
[2025-11-22 14:30:20] 2025-11-22 22:29:44,294 | INFO     | could have reported an average CPU frequency of 1283 MHz (4 samples)
[2025-11-22 14:30:20] 2025-11-22 22:29:44,294 | INFO     | ..............................
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . Timing measurements:
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . get job = 0 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . initial setup = 4 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . payload setup = 20 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . stage-in = 0 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . payload execution = 230 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . stage-out = 1 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . log creation = 0 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | ..............................
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 14:30:20] 2025-11-22 22:29:44,296 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895339655/pilotlog.txt
[2025-11-22 14:30:20] 2025-11-22 22:29:44,324 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-22 14:30:20] - Log from pilotlog.txt -
[2025-11-22 14:30:20] 2025-11-22 22:29:44,290 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895339655/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 14:30:20] 2025-11-22 22:29:44,290 | INFO     | extracted standard info from prmon json
[2025-11-22 14:30:20] 2025-11-22 22:29:44,291 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 14:30:20] 2025-11-22 22:29:44,291 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 14:30:20] 2025-11-22 22:29:44,291 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 14:30:20] 2025-11-22 22:29:44,291 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 14:30:20] 2025-11-22 22:29:44,292 | WARNING  | wrong length of table data, x=[1763850213.0, 1763850274.0, 1763850335.0, 1763850396.0], y=[2042.0, 688927.0, 371854.0, 562885.0] (must be same and length>=4)
[2025-11-22 14:30:20] 2025-11-22 22:29:44,294 | INFO     | could have reported an average CPU frequency of 1283 MHz (4 samples)
[2025-11-22 14:30:20] 2025-11-22 22:29:44,294 | INFO     | ..............................
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . Timing measurements:
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . get job = 0 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . initial setup = 4 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . payload setup = 20 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . stage-in = 0 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . payload execution = 230 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . stage-out = 1 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . log creation = 0 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | ..............................
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 14:30:20] 2025-11-22 22:29:44,296 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895339655/pilotlog.txt
[2025-11-22 14:30:20] 2025-11-22 22:29:44,324 | WARNING  | 
[2025-11-22 14:30:20] [begin log extracts]
[2025-11-22 14:30:20] - Log from pilotlog.txt -
[2025-11-22 14:30:20] 2025-11-22 22:29:44,290 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895339655/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 14:30:20] 2025-11-22 22:29:44,290 | INFO     | extracted standard info from prmon json
[2025-11-22 14:30:20] 2025-11-22 22:29:44,291 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 14:30:20] 2025-11-22 22:29:44,291 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 14:30:20] 2025-11-22 22:29:44,291 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 14:30:20] 2025-11-22 22:29:44,291 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 14:30:20] 2025-11-22 22:29:44,292 | WARNING  | wrong length of table data, x=[1763850213.0, 1763850274.0, 1763850335.0, 1763850396.0], y=[2042.0, 688927.0, 371854.0, 562885.0] (must be same and length>=4)
[2025-11-22 14:30:20] 2025-11-22 22:29:44,294 | INFO     | could have reported an average CPU frequency of 1283 MHz (4 samples)
[2025-11-22 14:30:20] 2025-11-22 22:29:44,294 | INFO     | ..............................
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . Timing measurements:
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . get job = 0 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . initial setup = 4 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . payload setup = 20 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . stage-in = 0 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . payload execution = 230 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . stage-out = 1 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | . log creation = 0 s
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | ..............................
[2025-11-22 14:30:20] 2025-11-22 22:29:44,295 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 14:30:20] 2025-11-22 22:29:44,296 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895339655/pilotlog.txt
[2025-11-22 14:30:20] [end log extracts]
[2025-11-22 14:30:20] 2025-11-22 22:29:44,325 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-22 14:30:20] 2025-11-22 22:29:44,326 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-22 14:30:20] 2025-11-22 22:29:45,103 | INFO     | 
[2025-11-22 14:30:20] 2025-11-22 22:29:45,104 | INFO     | job summary report
[2025-11-22 14:30:20] 2025-11-22 22:29:45,104 | INFO     | --------------------------------------------------
[2025-11-22 14:30:20] 2025-11-22 22:29:45,104 | INFO     | PanDA job id: 6895339655
[2025-11-22 14:30:20] 2025-11-22 22:29:45,104 | INFO     | task id: 47556137
[2025-11-22 14:30:20] 2025-11-22 22:29:45,104 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-22 14:27:00,328 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-22 14:30:20] 2025-11-22 22:29:45,104 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-22 14:30:20] 2025-11-22 22:29:45,104 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 14:30:20] 2025-11-22 22:29:45,104 | INFO     | pilot state: failed 
[2025-11-22 14:30:20] 2025-11-22 22:29:45,104 | INFO     | transexitcode: 65
[2025-11-22 14:30:20] 2025-11-22 22:29:45,105 | INFO     | exeerrorcode: 65
[2025-11-22 14:30:20] 2025-11-22 22:29:45,105 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-22 14:30:20] 2025-11-22 22:29:45,105 | INFO     | exitcode: 65
[2025-11-22 14:30:20] 2025-11-22 22:29:45,105 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-22 14:30:20] 2025-11-22 22:29:45,105 | INFO     | cpuconsumptiontime: 78 s
[2025-11-22 14:30:20] 2025-11-22 22:29:45,105 | INFO     | nevents: 0
[2025-11-22 14:30:20] 2025-11-22 22:29:45,105 | INFO     | neventsw: 0
[2025-11-22 14:30:20] 2025-11-22 22:29:45,105 | INFO     | pid: 3800724
[2025-11-22 14:30:20] 2025-11-22 22:29:45,105 | INFO     | pgrp: 3800724
[2025-11-22 14:30:20] 2025-11-22 22:29:45,105 | INFO     | corecount: 12
[2025-11-22 14:30:20] 2025-11-22 22:29:45,106 | INFO     | event service: False
[2025-11-22 14:30:20] 2025-11-22 22:29:45,106 | INFO     | sizes: {0: 2298526, 1: 2298610, 2: 2298781, 3: 2298837, 15: 2298837, 25: 2299127, 26: 2299283, 37: 2299311, 252: 2324820, 254: 2329138, 411: 2329276}
[2025-11-22 14:30:20] 2025-11-22 22:29:45,106 | INFO     | --------------------------------------------------
[2025-11-22 14:30:20] 2025-11-22 22:29:45,106 | INFO     | 
[2025-11-22 14:30:20] 2025-11-22 22:29:45,106 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-22 14:30:20] 2025-11-22 22:29:45,391 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,391 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,391 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,391 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,392 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,392 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,392 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,392 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,392 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,392 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,392 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,392 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,393 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 14:30:20] 2025-11-22 22:29:45,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,393 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 14:30:20] 2025-11-22 22:29:45,393 | INFO     | job 6895339655 has completed (purged errors)
[2025-11-22 14:30:20] 2025-11-22 22:29:45,394 | INFO     | overall cleanup function is called
[2025-11-22 14:30:20] 2025-11-22 22:29:46,408 | INFO     | --- collectZombieJob: --- 10, [3800724]
[2025-11-22 14:30:20] 2025-11-22 22:29:46,408 | INFO     | zombie collector waiting for pid 3800724
[2025-11-22 14:30:20] 2025-11-22 22:29:46,408 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 14:30:20] 2025-11-22 22:29:46,408 | INFO     | collected zombie processes
[2025-11-22 14:30:20] 2025-11-22 22:29:46,408 | INFO     | will attempt to kill all subprocesses of pid=3800724
[2025-11-22 14:30:20] 2025-11-22 22:29:47,053 | INFO     | PID=3793831 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 14:30:20] 2025-11-22 22:29:47,054 | INFO     | .. there are 35 such processes running
[2025-11-22 14:30:20] 2025-11-22 22:29:48,636 | INFO     | process IDs to be killed: [3800724] (in reverse order)
[2025-11-22 14:30:20] 2025-11-22 22:29:49,225 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 14:30:20] 2025-11-22 22:29:49,226 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 14:30:20] 2025-11-22 22:29:49,254 | INFO     | did not find any defunct processes belonging to 3800724
[2025-11-22 14:30:20] 2025-11-22 22:29:49,272 | INFO     | did not find any defunct processes belonging to 3800724
[2025-11-22 14:30:20] 2025-11-22 22:29:49,274 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 14:30:20] 2025-11-22 22:29:49,274 | INFO     | ready for new job
[2025-11-22 14:30:20] 2025-11-22 22:29:49,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 14:30:20] 2025-11-22 22:29:49,276 | INFO     | ***************************************
[2025-11-22 14:30:20] 2025-11-22 22:29:49,277 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 14:30:20] 2025-11-22 22:29:49,277 | INFO     | ***************************************
[2025-11-22 14:30:20] 2025-11-22 22:29:49,277 | INFO     | 
[2025-11-22 14:30:20] 2025-11-22 22:29:49,281 | INFO     | architecture information:
[2025-11-22 14:30:20] 2025-11-22 22:29:49,281 | INFO     | executing command: cat /etc/os-release
[2025-11-22 14:30:20] 2025-11-22 22:29:49,327 | INFO     | cat /etc/os-release:
[2025-11-22 14:30:20] NAME="CentOS Linux"
[2025-11-22 14:30:20] VERSION="7 (Core)"
[2025-11-22 14:30:20] ID="centos"
[2025-11-22 14:30:20] ID_LIKE="rhel fedora"
[2025-11-22 14:30:20] VERSION_ID="7"
[2025-11-22 14:30:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 14:30:20] ANSI_COLOR="0;31"
[2025-11-22 14:30:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 14:30:20] HOME_URL="https://www.centos.org/"
[2025-11-22 14:30:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 14:30:20] 
[2025-11-22 14:30:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 14:30:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 14:30:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 14:30:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 14:30:20] 
[2025-11-22 14:30:20] 2025-11-22 22:29:49,327 | INFO     | ***************************************
[2025-11-22 14:30:20] 2025-11-22 22:29:49,831 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-22 14:30:20] 2025-11-22 22:29:49,947 | INFO     | sufficient remaining disk space (1593534578688 B)
[2025-11-22 14:30:20] 2025-11-22 22:29:49,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 14:30:20] 2025-11-22 22:29:49,948 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 14:30:20] 2025-11-22 22:29:49,948 | INFO     | update_server=False
[2025-11-22 14:30:20] 2025-11-22 22:29:49,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 14:30:20] 2025-11-22 22:29:49,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 14:30:20] 2025-11-22 22:29:49,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 14:30:20] 2025-11-22 22:29:50,067 | INFO     | all data control threads have been joined
[2025-11-22 14:30:20] 2025-11-22 22:29:50,399 | INFO     | all job control threads have been joined
[2025-11-22 14:30:20] 2025-11-22 22:29:50,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 14:30:20] 2025-11-22 22:29:50,410 | INFO     | aborting loop
[2025-11-22 14:30:20] 2025-11-22 22:29:50,681 | INFO     | all payload control threads have been joined
[2025-11-22 14:30:20] 2025-11-22 22:29:50,954 | INFO     | [job] retrieve thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:50,966 | INFO     | [job] queue monitor thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:51,073 | INFO     | [data] control thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:51,100 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:51,407 | INFO     | [job] control thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:51,416 | INFO     | [job] job monitor thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:51,637 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:51,688 | INFO     | [payload] control thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:51,689 | INFO     | [data] copytool_in thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:51,689 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:51,976 | INFO     | [data] copytool_out thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:52,079 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:52,126 | INFO     | [payload] failed_post thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:52,126 | INFO     | [payload] validate_post thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:52,380 | INFO     | [job] validate thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:52,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 14:30:20] 2025-11-22 22:29:54,197 | INFO     | [monitor] cgroup control has ended
[2025-11-22 14:30:20] 2025-11-22 22:29:56,572 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 14:30:20] 2025-11-22 22:29:58,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140675686901568)>', '<ExcThread(monitor, started 140675358099200)>']
[2025-11-22 14:30:20] 2025-11-22 22:30:03,664 | INFO     | all workflow threads have been joined
[2025-11-22 14:30:20] 2025-11-22 22:30:03,665 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 14:30:20] 2025-11-22 22:30:03,665 | INFO     | traces error code: 0
[2025-11-22 14:30:20] 2025-11-22 22:30:03,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 14:30:20] 2025-11-22 22:30:19,764 | INFO     | PID=3793831 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 14:30:20] 2025-11-22 22:30:19,764 | INFO     | .. there are 35 such processes running
[2025-11-22 14:30:20] 2025-11-22 22:30:19,765 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 14:30:20] 2025-11-22 22:30:19,765 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 14:30:20] 2025-11-22 22:30:19,765 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 14:30:20] 2025-11-22 22:30:19,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 14:30:20] 2025-11-22 22:30:19,766 | INFO     | [monitor] control thread has ended
[2025-11-22 14:30:20] 2025-11-22 22:30:19,927 [wrapper] ==== pilot stdout END ====
[2025-11-22 14:30:20] 2025-11-22 22:30:19,930 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 14:30:20] 2025-11-22 22:30:19,933 [wrapper] pilotpid: 3793831
[2025-11-22 14:30:20] 2025-11-22 22:30:19,936 [wrapper] Pilot exit status: 0
[2025-11-22 14:30:20] 2025-11-22 22:30:19,987 [wrapper] pandaids: 6895339655
[2025-11-22 14:30:20] 2025-11-22 22:30:20,079 [wrapper] cleanup supervisor_pilot 3793837 3793832
[2025-11-22 14:30:20] 2025-11-22 22:30:20,083 [wrapper] Test setup, not cleaning
[2025-11-22 14:30:20] 2025-11-22 22:30:20,113 [wrapper] apfmon messages muted
[2025-11-22 14:30:20] 2025-11-22 22:30:20,145 [wrapper] ==== wrapper stdout END ====
[2025-11-22 14:30:20] 2025-11-22 22:30:20,168 [wrapper] ==== wrapper stderr END ====
[2025-11-22 14:30:20]  *** Error codes and diagnostics ***
[2025-11-22 14:30:20]     "exeErrorCode": 65,
[2025-11-22 14:30:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-22 14:30:20]     "pilotErrorCode": 1305,
[2025-11-22 14:30:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-22 14:30:20]  *** Listing of results directory ***
[2025-11-22 14:30:20] total 404396
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc    576529 Nov 22 02:57 pilot3.tar.gz
[2025-11-22 14:30:20] -rwx------. 1 boinc boinc     36292 Nov 22 03:09 runpilot2-wrapper.sh
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc      5112 Nov 22 03:09 queuedata.json
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc       100 Nov 22 14:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 14:30:20] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 14:21 run_atlas
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc       105 Nov 22 14:21 job.xml
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc      6594 Nov 22 14:21 init_data.xml
[2025-11-22 14:30:20] -rw-r--r--. 2 boinc boinc 409841417 Nov 22 14:21 EVNT.47483658._000355.pool.root.1
[2025-11-22 14:30:20] -rw-r--r--. 2 boinc boinc     15847 Nov 22 14:21 start_atlas.sh
[2025-11-22 14:30:20] drwxrwx--x. 2 boinc boinc      4096 Nov 22 14:21 shared
[2025-11-22 14:30:20] -rw-r--r--. 2 boinc boinc    590098 Nov 22 14:21 input.tar.gz
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc         0 Nov 22 14:21 boinc_lockfile
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc      2785 Nov 22 14:21 pandaJob.out
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc    989784 Nov 22 14:21 agis_schedconf.cvmfs.json
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc   1526164 Nov 22 14:21 agis_ddmendpoints.agis.ALL.json
[2025-11-22 14:30:20] drwx------. 5 boinc boinc      4096 Nov 22 14:21 pilot3
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc       524 Nov 22 14:26 boinc_task_state.xml
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc      1015 Nov 22 14:27 memory_monitor_summary.json
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc     51508 Nov 22 14:27 log.47556137._003512.job.log.tgz.1
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc     10338 Nov 22 14:29 heartbeat.json
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc        95 Nov 22 14:30 pilot_heartbeat.json
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc       823 Nov 22 14:30 pilotlog.txt
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc    122711 Nov 22 14:30 log.47556137._003512.job.log.1
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc      8192 Nov 22 14:30 boinc_mmap_file
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc       186 Nov 22 14:30 output.list
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc       620 Nov 22 14:30 runtime_log
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc    194560 Nov 22 14:30 result.tar.gz
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc      8636 Nov 22 14:30 runtime_log.err
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc       646 Nov 22 14:30 7Q4KDmPf0g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH8JKDmcsUvMo.diag
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc        23 Nov 22 14:30 wrapper_checkpoint.txt
[2025-11-22 14:30:20] -rw-r--r--. 1 boinc boinc     22670 Nov 22 14:30 stderr.txt
[2025-11-22 14:30:20] No HITS result produced
[2025-11-22 14:30:20]  *** Contents of shared directory: ***
[2025-11-22 14:30:20] total 401028
[2025-11-22 14:30:20] -rw-r--r--. 2 boinc boinc 409841417 Nov 22 14:21 ATLAS.root_0
[2025-11-22 14:30:20] -rw-r--r--. 2 boinc boinc     15847 Nov 22 14:21 start_atlas.sh
[2025-11-22 14:30:20] -rw-r--r--. 2 boinc boinc    590098 Nov 22 14:21 input.tar.gz
[2025-11-22 14:30:20] -rw-------. 1 boinc boinc    194560 Nov 22 14:30 result.tar.gz
14:30:22 (3790024): run_atlas exited; CPU time 84.940095
14:30:22 (3790024): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN