Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:01:53 (10679): wrapper (7.7.26015): starting
17:01:53 (10679): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 17:01:53] Arguments: --nthreads 8
[2025-11-22 17:01:53] Threads: 8
[2025-11-22 17:01:53] Checking for CVMFS
[2025-11-22 17:01:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 17:01:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 17:01:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 17:01:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 17:01:53] 2.11.2.0 4697 112478 136712 153185 0 82 15557191 18432001 1885 130560 0 79614137 99.973 4811145 32102 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 17:01:53] CVMFS is ok
[2025-11-22 17:01:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 17:01:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 17:01:53] Further information can be found at the LHC@home message board.
[2025-11-22 17:01:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 17:01:53] Checking for apptainer binary...
[2025-11-22 17:01:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 17:01:53] Running /usr/bin/apptainer --version
[2025-11-22 17:01:53] apptainer version 1.3.2-1.el7
[2025-11-22 17:01:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 17:01:54] c-206-21.aglt2.org
[2025-11-22 17:01:54] apptainer works
[2025-11-22 17:01:54] Set ATHENA_PROC_NUMBER=8
[2025-11-22 17:01:54] Set ATHENA_CORE_NUMBER=8
[2025-11-22 17:01:54] Starting ATLAS job with PandaID=6895332010
[2025-11-22 17:01:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 12:50:09]  *** The last 200 lines of the pilot log: ***
[2025-11-23 12:50:09] 2025-11-23 17:49:18,055 | INFO     | time since job start (71232s) is within the limit (172800.0s)
[2025-11-23 12:50:09] 2025-11-23 17:49:18,345 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 12:50:09] 2025-11-23 17:49:18,353 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2461.25
[2025-11-23 12:50:09] 2025-11-23 17:49:18,357 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895332010/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 12:50:09] 2025-11-23 17:49:18,358 | INFO     | extracted standard info from prmon json
[2025-11-23 12:50:09] 2025-11-23 17:49:18,359 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 12:50:09] 2025-11-23 17:49:18,359 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 12:50:09] 2025-11-23 17:49:18,390 | INFO     | fitting pss+swap vs Time
[2025-11-23 12:50:09] 2025-11-23 17:49:18,392 | INFO     | sum of square deviations: 494091899726.4075
[2025-11-23 12:50:09] 2025-11-23 17:49:18,439 | INFO     | sum of deviations: 2324018121558.187
[2025-11-23 12:50:09] 2025-11-23 17:49:18,439 | INFO     | mean x: 1763884547.1078768
[2025-11-23 12:50:09] 2025-11-23 17:49:18,439 | INFO     | mean y: 2868613.2842465756
[2025-11-23 12:50:09] 2025-11-23 17:49:18,439 | INFO     | intersect: -8293765381.494981
[2025-11-23 12:50:09] 2025-11-23 17:49:18,441 | INFO     | chi2: 6.125386826261376
[2025-11-23 12:50:09] 2025-11-23 17:49:18,443 | INFO     | sum of square deviations: 487773895484.5517
[2025-11-23 12:50:09] 2025-11-23 17:49:18,481 | INFO     | sum of deviations: 2699195891338.4116
[2025-11-23 12:50:09] 2025-11-23 17:49:18,482 | INFO     | mean x: 1763884394.61049
[2025-11-23 12:50:09] 2025-11-23 17:49:18,482 | INFO     | mean y: 2877665.5726569216
[2025-11-23 12:50:09] 2025-11-23 17:49:18,482 | INFO     | intersect: -9757934782.16803
[2025-11-23 12:50:09] 2025-11-23 17:49:18,483 | INFO     | chi2: 3.0850455401566967
[2025-11-23 12:50:09] 2025-11-23 17:49:18,483 | INFO     | current chi2=3.0850455401566967 (change=49.6350903598418 %)
[2025-11-23 12:50:09] 2025-11-23 17:49:18,484 | INFO     | sum of square deviations: 481509985280.1807
[2025-11-23 12:50:09] 2025-11-23 17:49:18,519 | INFO     | sum of deviations: 2861615415434.582
[2025-11-23 12:50:09] 2025-11-23 17:49:18,519 | INFO     | mean x: 1763884242.113126
[2025-11-23 12:50:09] 2025-11-23 17:49:18,519 | INFO     | mean y: 2881616.98791019
[2025-11-23 12:50:09] 2025-11-23 17:49:18,519 | INFO     | intersect: -10479888195.845766
[2025-11-23 12:50:09] 2025-11-23 17:49:18,520 | INFO     | chi2: 2.377541309487557
[2025-11-23 12:50:09] 2025-11-23 17:49:18,520 | INFO     | current chi2=2.377541309487557 (change=22.933348031977648 %)
[2025-11-23 12:50:09] 2025-11-23 17:49:18,520 | INFO     | right removable region: 1157
[2025-11-23 12:50:09] 2025-11-23 17:49:18,521 | INFO     | sum of square deviations: 487773462384.55194
[2025-11-23 12:50:09] 2025-11-23 17:49:18,548 | INFO     | sum of deviations: 2023493843952.8271
[2025-11-23 12:50:09] 2025-11-23 17:49:18,548 | INFO     | mean x: 1763884699.61049
[2025-11-23 12:50:09] 2025-11-23 17:49:18,548 | INFO     | mean y: 2875858.6861564917
[2025-11-23 12:50:09] 2025-11-23 17:49:18,548 | INFO     | intersect: -7314475547.960289
[2025-11-23 12:50:09] 2025-11-23 17:49:18,550 | INFO     | chi2: 4.130011057076082
[2025-11-23 12:50:09] 2025-11-23 17:49:18,550 | INFO     | current chi2=4.130011057076082 (change=32.575506262404815 %)
[2025-11-23 12:50:09] 2025-11-23 17:49:18,552 | INFO     | sum of square deviations: 481509402609.07184
[2025-11-23 12:50:09] 2025-11-23 17:49:18,597 | INFO     | sum of deviations: 1946744111115.8472
[2025-11-23 12:50:09] 2025-11-23 17:49:18,597 | INFO     | mean x: 1763884852.1096718
[2025-11-23 12:50:09] 2025-11-23 17:49:18,598 | INFO     | mean y: 2877726.772884283
[2025-11-23 12:50:09] 2025-11-23 17:49:18,598 | INFO     | intersect: -7128514578.184476
[2025-11-23 12:50:09] 2025-11-23 17:49:18,599 | INFO     | chi2: 4.080363843599882
[2025-11-23 12:50:09] 2025-11-23 17:49:18,600 | INFO     | current chi2=4.080363843599882 (change=1.202108488090808 %)
[2025-11-23 12:50:09] 2025-11-23 17:49:18,600 | INFO     | left removable region: 20
[2025-11-23 12:50:09] 2025-11-23 17:49:18,601 | INFO     | sum of square deviations: 455786132073.50037
[2025-11-23 12:50:09] 2025-11-23 17:49:18,646 | INFO     | sum of deviations: 2349494621342.2646
[2025-11-23 12:50:09] 2025-11-23 17:49:18,647 | INFO     | mean x: 1763884821.6138961
[2025-11-23 12:50:09] 2025-11-23 17:49:18,647 | INFO     | mean y: 2894688.565523307
[2025-11-23 12:50:09] 2025-11-23 17:49:18,647 | INFO     | intersect: -9089610785.867838
[2025-11-23 12:50:09] 2025-11-23 17:49:18,649 | INFO     | chi2: 0.2327420754897815
[2025-11-23 12:50:09] 2025-11-23 17:49:18,649 | INFO     | current memory leak: 5.15 B/s (using 1137 data points, chi2=0.23)
[2025-11-23 12:50:09] 2025-11-23 17:49:18,650 | INFO     | could have reported an average CPU frequency of 2623 MHz (42 samples)
[2025-11-23 12:50:09] 2025-11-23 17:49:18,651 | INFO     | ..............................
[2025-11-23 12:50:09] 2025-11-23 17:49:18,651 | INFO     | . Timing measurements:
[2025-11-23 12:50:09] 2025-11-23 17:49:18,651 | INFO     | . get job = 0 s
[2025-11-23 12:50:09] 2025-11-23 17:49:18,651 | INFO     | . initial setup = 2 s
[2025-11-23 12:50:09] 2025-11-23 17:49:18,651 | INFO     | . payload setup = 5 s
[2025-11-23 12:50:09] 2025-11-23 17:49:18,652 | INFO     | . stage-in = 0 s
[2025-11-23 12:50:09] 2025-11-23 17:49:18,652 | INFO     | . payload execution = 71198 s
[2025-11-23 12:50:09] 2025-11-23 17:49:18,652 | INFO     | . stage-out = 4 s
[2025-11-23 12:50:09] 2025-11-23 17:49:18,652 | INFO     | . log creation = 0 s
[2025-11-23 12:50:09] 2025-11-23 17:49:18,652 | INFO     | ..............................
[2025-11-23 12:50:09] 2025-11-23 17:49:19,146 | INFO     | 
[2025-11-23 12:50:09] 2025-11-23 17:49:19,147 | INFO     | job summary report
[2025-11-23 12:50:09] 2025-11-23 17:49:19,147 | INFO     | --------------------------------------------------
[2025-11-23 12:50:09] 2025-11-23 17:49:19,147 | INFO     | PanDA job id: 6895332010
[2025-11-23 12:50:09] 2025-11-23 17:49:19,147 | INFO     | task id: 47556137
[2025-11-23 12:50:09] 2025-11-23 17:49:19,147 | INFO     | errors: (none)
[2025-11-23 12:50:09] 2025-11-23 17:49:19,147 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 12:50:09] 2025-11-23 17:49:19,148 | INFO     | pilot state: finished 
[2025-11-23 12:50:09] 2025-11-23 17:49:19,148 | INFO     | transexitcode: 0
[2025-11-23 12:50:09] 2025-11-23 17:49:19,148 | INFO     | exeerrorcode: 0
[2025-11-23 12:50:09] 2025-11-23 17:49:19,148 | INFO     | exeerrordiag: 
[2025-11-23 12:50:09] 2025-11-23 17:49:19,148 | INFO     | exitcode: 0
[2025-11-23 12:50:09] 2025-11-23 17:49:19,148 | INFO     | exitmsg: OK
[2025-11-23 12:50:09] 2025-11-23 17:49:19,149 | INFO     | cpuconsumptiontime: 551732 s
[2025-11-23 12:50:09] 2025-11-23 17:49:19,149 | INFO     | nevents: 1000
[2025-11-23 12:50:09] 2025-11-23 17:49:19,149 | INFO     | neventsw: 0
[2025-11-23 12:50:09] 2025-11-23 17:49:19,149 | INFO     | pid: 20898
[2025-11-23 12:50:09] 2025-11-23 17:49:19,149 | INFO     | pgrp: 20898
[2025-11-23 12:50:09] 2025-11-23 17:49:19,149 | INFO     | corecount: 8
[2025-11-23 12:50:09] 2025-11-23 17:49:19,150 | INFO     | event service: False
[2025-11-23 12:50:09] 2025-11-23 17:49:19,150 | INFO     | sizes: {0: 2298756, 1: 2298756, 4: 2299046, 11: 2299074, 71208: 2356012, 71213: 2365190, 71217: 2365380}
[2025-11-23 12:50:09] 2025-11-23 17:49:19,150 | INFO     | --------------------------------------------------
[2025-11-23 12:50:09] 2025-11-23 17:49:19,150 | INFO     | 
[2025-11-23 12:50:09] 2025-11-23 17:49:19,150 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 12:50:09] 2025-11-23 17:49:19,191 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,191 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,191 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,191 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,192 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,192 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,192 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,192 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,194 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,194 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,194 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 12:50:09] 2025-11-23 17:49:19,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,194 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 12:50:09] 2025-11-23 17:49:19,195 | INFO     | job 6895332010 has completed (purged errors)
[2025-11-23 12:50:09] 2025-11-23 17:49:19,195 | INFO     | overall cleanup function is called
[2025-11-23 12:50:09] 2025-11-23 17:49:20,211 | INFO     | --- collectZombieJob: --- 10, [20898]
[2025-11-23 12:50:09] 2025-11-23 17:49:20,211 | INFO     | zombie collector waiting for pid 20898
[2025-11-23 12:50:09] 2025-11-23 17:49:20,211 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 12:50:09] 2025-11-23 17:49:20,212 | INFO     | collected zombie processes
[2025-11-23 12:50:09] 2025-11-23 17:49:20,212 | INFO     | will attempt to kill all subprocesses of pid=20898
[2025-11-23 12:50:09] 2025-11-23 17:49:20,378 | INFO     | process IDs to be killed: [20898] (in reverse order)
[2025-11-23 12:50:09] 2025-11-23 17:49:20,509 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 12:50:09] 2025-11-23 17:49:20,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 12:50:09] 2025-11-23 17:49:20,513 | INFO     | did not find any defunct processes belonging to 20898
[2025-11-23 12:50:09] 2025-11-23 17:49:20,515 | INFO     | did not find any defunct processes belonging to 20898
[2025-11-23 12:50:09] 2025-11-23 17:49:20,516 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 12:50:09] 2025-11-23 17:49:20,517 | INFO     | ready for new job
[2025-11-23 12:50:09] 2025-11-23 17:49:20,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 12:50:09] 2025-11-23 17:49:20,520 | INFO     | ***************************************
[2025-11-23 12:50:09] 2025-11-23 17:49:20,521 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 12:50:09] 2025-11-23 17:49:20,521 | INFO     | ***************************************
[2025-11-23 12:50:09] 2025-11-23 17:49:20,521 | INFO     | 
[2025-11-23 12:50:09] 2025-11-23 17:49:20,522 | INFO     | architecture information:
[2025-11-23 12:50:09] 2025-11-23 17:49:20,522 | INFO     | executing command: cat /etc/os-release
[2025-11-23 12:50:09] 2025-11-23 17:49:20,539 | INFO     | cat /etc/os-release:
[2025-11-23 12:50:09] NAME="CentOS Linux"
[2025-11-23 12:50:09] VERSION="7 (Core)"
[2025-11-23 12:50:09] ID="centos"
[2025-11-23 12:50:09] ID_LIKE="rhel fedora"
[2025-11-23 12:50:09] VERSION_ID="7"
[2025-11-23 12:50:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 12:50:09] ANSI_COLOR="0;31"
[2025-11-23 12:50:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 12:50:09] HOME_URL="https://www.centos.org/"
[2025-11-23 12:50:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 12:50:09] 
[2025-11-23 12:50:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 12:50:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 12:50:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 12:50:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 12:50:09] 
[2025-11-23 12:50:09] 2025-11-23 17:49:20,539 | INFO     | ***************************************
[2025-11-23 12:50:09] 2025-11-23 17:49:21,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 12:50:09] 2025-11-23 17:49:21,062 | INFO     | sufficient remaining disk space (24736956416 B)
[2025-11-23 12:50:09] 2025-11-23 17:49:21,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 12:50:09] 2025-11-23 17:49:21,062 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 12:50:09] 2025-11-23 17:49:21,063 | INFO     | update_server=False
[2025-11-23 12:50:09] 2025-11-23 17:49:21,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 12:50:09] 2025-11-23 17:49:21,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 12:50:09] 2025-11-23 17:49:21,341 | INFO     | all data control threads have been joined
[2025-11-23 12:50:09] 2025-11-23 17:49:21,348 | INFO     | all payload control threads have been joined
[2025-11-23 12:50:09] 2025-11-23 17:49:21,552 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 12:50:09] 2025-11-23 17:49:21,552 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 12:50:09] 2025-11-23 17:49:21,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:50:09] 2025-11-23 17:49:21,559 | INFO     | will abort loop
[2025-11-23 12:50:09] 2025-11-23 17:49:22,068 | INFO     | [job] retrieve thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:22,182 | INFO     | [payload] validate_post thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:22,203 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:22,339 | INFO     | all job control threads have been joined
[2025-11-23 12:50:09] 2025-11-23 17:49:22,347 | INFO     | [data] control thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:22,353 | INFO     | [payload] control thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:22,377 | INFO     | [payload] failed_post thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:22,443 | INFO     | [job] validate thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:22,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 12:50:09] 2025-11-23 17:49:22,565 | INFO     | [job] job monitor thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:22,572 | INFO     | [data] copytool_in thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:22,572 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:22,805 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:22,979 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:23,347 | INFO     | [job] control thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:23,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:50:09] 2025-11-23 17:49:24,452 | INFO     | [data] copytool_out thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:24,827 | INFO     | [job] queue monitor thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:25,073 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 12:50:09] 2025-11-23 17:49:51,285 | INFO     | PID=14440 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 12:50:09] 2025-11-23 17:49:51,285 | INFO     | .. there are 3 such processes running
[2025-11-23 12:50:09] 2025-11-23 17:49:51,286 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 12:50:09] 2025-11-23 17:49:51,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 12:50:09] 2025-11-23 17:49:51,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 12:50:09] 2025-11-23 17:50:04,040 | INFO     | [monitor] cgroup control has ended
[2025-11-23 12:50:09] 2025-11-23 17:50:04,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273309144896)>', '<ExcThread(monitor, started 140272885294848)>']
[2025-11-23 12:50:09] 2025-11-23 17:50:05,353 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 12:50:09] 2025-11-23 17:50:05,353 | INFO     | [monitor] control thread has ended
[2025-11-23 12:50:09] 2025-11-23 17:50:09,662 | INFO     | all workflow threads have been joined
[2025-11-23 12:50:09] 2025-11-23 17:50:09,663 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 12:50:09] 2025-11-23 17:50:09,663 | INFO     | traces error code: 0
[2025-11-23 12:50:09] 2025-11-23 17:50:09,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 12:50:09] 2025-11-23 17:50:09,797 [wrapper] ==== pilot stdout END ====
[2025-11-23 12:50:09] 2025-11-23 17:50:09,800 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 12:50:09] 2025-11-23 17:50:09,802 [wrapper] pilotpid: 14440
[2025-11-23 12:50:09] 2025-11-23 17:50:09,804 [wrapper] Pilot exit status: 0
[2025-11-23 12:50:09] 2025-11-23 17:50:09,813 [wrapper] pandaids: 6895332010
[2025-11-23 12:50:09] 2025-11-23 17:50:09,846 [wrapper] cleanup supervisor_pilot 18823 14441
[2025-11-23 12:50:09] 2025-11-23 17:50:09,849 [wrapper] Test setup, not cleaning
[2025-11-23 12:50:09] 2025-11-23 17:50:09,851 [wrapper] apfmon messages muted
[2025-11-23 12:50:09] 2025-11-23 17:50:09,854 [wrapper] ==== wrapper stdout END ====
[2025-11-23 12:50:09] 2025-11-23 17:50:09,856 [wrapper] ==== wrapper stderr END ====
[2025-11-23 12:50:09]  *** Error codes and diagnostics ***
[2025-11-23 12:50:09]     "exeErrorCode": 0,
[2025-11-23 12:50:09]     "exeErrorDiag": "",
[2025-11-23 12:50:09]     "pilotErrorCode": 0,
[2025-11-23 12:50:09]     "pilotErrorDiag": "",
[2025-11-23 12:50:09]  *** Listing of results directory ***
[2025-11-23 12:50:09] total 1336356
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 18:51 pilot3.tar.gz
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 19:09 queuedata.json
[2025-11-23 12:50:09] -rwx------ 1 boincer umatlas     36292 Nov 21 19:13 runpilot2-wrapper.sh
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas       100 Nov 22 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 12:50:09] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 17:01 run_atlas
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas       105 Nov 22 17:01 job.xml
[2025-11-23 12:50:09] -rw-r--r-- 2 boincer umatlas 411532723 Nov 22 17:01 EVNT.47483658._000187.pool.root.1
[2025-11-23 12:50:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 17:01 start_atlas.sh
[2025-11-23 12:50:09] drwxrwx--x 2 boincer umatlas      4096 Nov 22 17:01 shared
[2025-11-23 12:50:09] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 17:01 input.tar.gz
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas         0 Nov 22 17:01 boinc_lockfile
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 17:01 pandaJob.out
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas        57 Nov 22 17:01 setup.sh.local
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas    989768 Nov 22 17:02 agis_schedconf.cvmfs.json
[2025-11-23 12:50:09] drwx------ 5 boincer umatlas      4096 Nov 22 17:02 pilot3
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas       533 Nov 23 12:38 boinc_task_state.xml
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas 928612874 Nov 23 12:48 HITS.47556137._001864.pool.root.1
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas      1067 Nov 23 12:49 memory_monitor_summary.json
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas   1526164 Nov 23 12:49 agis_ddmendpoints.agis.ALL.json
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas   2328218 Nov 23 12:49 log.47556137._001864.job.log.tgz.1
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas      8677 Nov 23 12:49 heartbeat.json
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 12:49 init_data.xml
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 12:49 boinc_mmap_file
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas        29 Nov 23 12:49 wrapper_checkpoint.txt
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas        95 Nov 23 12:49 pilot_heartbeat.json
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas      5007 Nov 23 12:50 pilotlog.txt
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas   9847544 Nov 23 12:50 log.47556137._001864.job.log.1
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas       353 Nov 23 12:50 output.list
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas       620 Nov 23 12:50 runtime_log
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas  12195840 Nov 23 12:50 result.tar.gz
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 12:50 runtime_log.err
[2025-11-23 12:50:09] -rw------- 1 boincer umatlas       668 Nov 23 12:50 MxBMDmdQqg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmooJKDmW4wc4n.diag
[2025-11-23 12:50:09] -rw-r--r-- 1 boincer umatlas     21247 Nov 23 12:50 stderr.txt
[2025-11-23 12:50:10] HITS file was successfully produced:
[2025-11-23 12:50:10] -rw------- 1 boincer umatlas 928612874 Nov 23 12:48 shared/HITS.pool.root.1
[2025-11-23 12:50:10]  *** Contents of shared directory: ***
[2025-11-23 12:50:10] total 1321256
[2025-11-23 12:50:10] -rw-r--r-- 2 boincer umatlas 411532723 Nov 22 17:01 ATLAS.root_0
[2025-11-23 12:50:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 17:01 start_atlas.sh
[2025-11-23 12:50:10] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 17:01 input.tar.gz
[2025-11-23 12:50:10] -rw------- 1 boincer umatlas 928612874 Nov 23 12:48 HITS.pool.root.1
[2025-11-23 12:50:10] -rw------- 1 boincer umatlas  12195840 Nov 23 12:50 result.tar.gz
12:50:11 (10679): run_atlas exited; CPU time 550822.765971
12:50:11 (10679): called boinc_finish(0)

</stderr_txt>
]]>

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