Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:09:11 (21142): wrapper (7.7.26015): starting
17:09:11 (21142): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 17:09:11] Arguments: --nthreads 8
[2025-11-22 17:09:11] Threads: 8
[2025-11-22 17:09:11] Checking for CVMFS
[2025-11-22 17:09:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 17:09:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 17:09:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 17:09:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 17:09:11] 2.11.4.0 5420 112485 70036 153185 0 90 12619959 18432001 1865 130560 0 78742995 99.972 4805717 31770 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 17:09:11] CVMFS is ok
[2025-11-22 17:09:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 17:09:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 17:09:12] Further information can be found at the LHC@home message board.
[2025-11-22 17:09:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 17:09:12] Checking for apptainer binary...
[2025-11-22 17:09:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 17:09:12] Running /usr/bin/apptainer --version
[2025-11-22 17:09:12] apptainer version 1.3.2-1.el7
[2025-11-22 17:09:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 17:09:12] c-206-22.aglt2.org
[2025-11-22 17:09:12] apptainer works
[2025-11-22 17:09:12] Set ATHENA_PROC_NUMBER=8
[2025-11-22 17:09:12] Set ATHENA_CORE_NUMBER=8
[2025-11-22 17:09:12] Starting ATLAS job with PandaID=6895332449
[2025-11-22 17:09:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 12:33:26]  *** The last 200 lines of the pilot log: ***
[2025-11-23 12:33:26] 2025-11-23 17:32:35,285 | INFO     | monitor loop #4999: job 0:6895332449 is in state 'finished'
[2025-11-23 12:33:26] 2025-11-23 17:32:35,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 12:33:26] 2025-11-23 17:32:35,844 | INFO     | time since job start (69791s) is within the limit (172800.0s)
[2025-11-23 12:33:26] 2025-11-23 17:32:36,866 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 12:33:26] 2025-11-23 17:32:36,873 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2411.375
[2025-11-23 12:33:26] 2025-11-23 17:32:36,877 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895332449/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 12:33:26] 2025-11-23 17:32:36,878 | INFO     | extracted standard info from prmon json
[2025-11-23 12:33:26] 2025-11-23 17:32:36,878 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 12:33:26] 2025-11-23 17:32:36,879 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 12:33:26] 2025-11-23 17:32:36,910 | INFO     | fitting pss+swap vs Time
[2025-11-23 12:33:26] 2025-11-23 17:32:36,912 | INFO     | sum of square deviations: 464252084475.125
[2025-11-23 12:33:26] 2025-11-23 17:32:36,957 | INFO     | sum of deviations: 2186738099719.6282
[2025-11-23 12:33:26] 2025-11-23 17:32:36,957 | INFO     | mean x: 1763884252.125
[2025-11-23 12:33:26] 2025-11-23 17:32:36,957 | INFO     | mean y: 2859888.499125874
[2025-11-23 12:33:26] 2025-11-23 17:32:36,957 | INFO     | intersect: -8305455844.704371
[2025-11-23 12:33:26] 2025-11-23 17:32:36,959 | INFO     | chi2: 6.5569424950131285
[2025-11-23 12:33:26] 2025-11-23 17:32:36,961 | INFO     | sum of square deviations: 458191612168.16425
[2025-11-23 12:33:26] 2025-11-23 17:32:37,004 | INFO     | sum of deviations: 2535571267579.5415
[2025-11-23 12:33:26] 2025-11-23 17:32:37,005 | INFO     | mean x: 1763884099.6277437
[2025-11-23 12:33:26] 2025-11-23 17:32:37,005 | INFO     | mean y: 2868661.425812116
[2025-11-23 12:33:26] 2025-11-23 17:32:37,005 | INFO     | intersect: -9758230676.889986
[2025-11-23 12:33:26] 2025-11-23 17:32:37,006 | INFO     | chi2: 3.7960701384732523
[2025-11-23 12:33:26] 2025-11-23 17:32:37,006 | INFO     | current chi2=3.7960701384732523 (change=42.10609378745739 %)
[2025-11-23 12:33:26] 2025-11-23 17:32:37,007 | INFO     | sum of square deviations: 452184117598.6842
[2025-11-23 12:33:26] 2025-11-23 17:32:37,031 | INFO     | sum of deviations: 2725762635339.4497
[2025-11-23 12:33:26] 2025-11-23 17:32:37,031 | INFO     | mean x: 1763883947.1305115
[2025-11-23 12:33:26] 2025-11-23 17:32:37,031 | INFO     | mean y: 2873488.8077601413
[2025-11-23 12:33:26] 2025-11-23 17:32:37,031 | INFO     | intersect: -10629806362.257853
[2025-11-23 12:33:26] 2025-11-23 17:32:37,032 | INFO     | chi2: 2.8952606445305755
[2025-11-23 12:33:26] 2025-11-23 17:32:37,032 | INFO     | current chi2=2.8952606445305755 (change=23.730054005402934 %)
[2025-11-23 12:33:26] 2025-11-23 17:32:37,032 | INFO     | right removable region: 1133
[2025-11-23 12:33:26] 2025-11-23 17:32:37,033 | INFO     | sum of square deviations: 458191176018.164
[2025-11-23 12:33:26] 2025-11-23 17:32:37,063 | INFO     | sum of deviations: 1879574830671.1633
[2025-11-23 12:33:26] 2025-11-23 17:32:37,063 | INFO     | mean x: 1763884404.6277437
[2025-11-23 12:33:26] 2025-11-23 17:32:37,063 | INFO     | mean y: 2867609.2669007904
[2025-11-23 12:33:26] 2025-11-23 17:32:37,063 | INFO     | intersect: -7232873506.402832
[2025-11-23 12:33:26] 2025-11-23 17:32:37,064 | INFO     | chi2: 4.433264461707021
[2025-11-23 12:33:26] 2025-11-23 17:32:37,064 | INFO     | current chi2=4.433264461707021 (change=32.38823636048763 %)
[2025-11-23 12:33:26] 2025-11-23 17:32:37,066 | INFO     | sum of square deviations: 452183453492.4595
[2025-11-23 12:33:26] 2025-11-23 17:32:37,091 | INFO     | sum of deviations: 1778823081030.5967
[2025-11-23 12:33:26] 2025-11-23 17:32:37,091 | INFO     | mean x: 1763884557.127866
[2025-11-23 12:33:26] 2025-11-23 17:32:37,091 | INFO     | mean y: 2870166.3544973545
[2025-11-23 12:33:26] 2025-11-23 17:32:37,091 | INFO     | intersect: -6935991789.470701
[2025-11-23 12:33:26] 2025-11-23 17:32:37,092 | INFO     | chi2: 4.3125686044112355
[2025-11-23 12:33:26] 2025-11-23 17:32:37,092 | INFO     | current chi2=4.3125686044112355 (change=2.7225052405132666 %)
[2025-11-23 12:33:26] 2025-11-23 17:32:37,092 | INFO     | left removable region: 20
[2025-11-23 12:33:26] 2025-11-23 17:32:37,093 | INFO     | sum of square deviations: 427524988952.96747
[2025-11-23 12:33:26] 2025-11-23 17:32:37,116 | INFO     | sum of deviations: 2189781016850.9187
[2025-11-23 12:33:26] 2025-11-23 17:32:37,116 | INFO     | mean x: 1763884526.6316261
[2025-11-23 12:33:26] 2025-11-23 17:32:37,116 | INFO     | mean y: 2888700.468104223
[2025-11-23 12:33:26] 2025-11-23 17:32:37,116 | INFO     | intersect: -9031719690.013426
[2025-11-23 12:33:26] 2025-11-23 17:32:37,117 | INFO     | chi2: 0.43997727852187796
[2025-11-23 12:33:26] 2025-11-23 17:32:37,117 | INFO     | current memory leak: 5.12 B/s (using 1113 data points, chi2=0.44)
[2025-11-23 12:33:26] 2025-11-23 17:32:37,118 | INFO     | could have reported an average CPU frequency of 2628 MHz (42 samples)
[2025-11-23 12:33:26] 2025-11-23 17:32:37,118 | INFO     | ..............................
[2025-11-23 12:33:26] 2025-11-23 17:32:37,118 | INFO     | . Timing measurements:
[2025-11-23 12:33:26] 2025-11-23 17:32:37,118 | INFO     | . get job = 0 s
[2025-11-23 12:33:26] 2025-11-23 17:32:37,119 | INFO     | . initial setup = 2 s
[2025-11-23 12:33:26] 2025-11-23 17:32:37,119 | INFO     | . payload setup = 5 s
[2025-11-23 12:33:26] 2025-11-23 17:32:37,119 | INFO     | . stage-in = 0 s
[2025-11-23 12:33:26] 2025-11-23 17:32:37,119 | INFO     | . payload execution = 69757 s
[2025-11-23 12:33:26] 2025-11-23 17:32:37,119 | INFO     | . stage-out = 4 s
[2025-11-23 12:33:26] 2025-11-23 17:32:37,119 | INFO     | . log creation = 0 s
[2025-11-23 12:33:26] 2025-11-23 17:32:37,119 | INFO     | ..............................
[2025-11-23 12:33:26] 2025-11-23 17:32:37,214 | INFO     | 
[2025-11-23 12:33:26] 2025-11-23 17:32:37,214 | INFO     | job summary report
[2025-11-23 12:33:26] 2025-11-23 17:32:37,214 | INFO     | --------------------------------------------------
[2025-11-23 12:33:26] 2025-11-23 17:32:37,214 | INFO     | PanDA job id: 6895332449
[2025-11-23 12:33:26] 2025-11-23 17:32:37,214 | INFO     | task id: 47556137
[2025-11-23 12:33:26] 2025-11-23 17:32:37,215 | INFO     | errors: (none)
[2025-11-23 12:33:26] 2025-11-23 17:32:37,215 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 12:33:26] 2025-11-23 17:32:37,215 | INFO     | pilot state: finished 
[2025-11-23 12:33:26] 2025-11-23 17:32:37,215 | INFO     | transexitcode: 0
[2025-11-23 12:33:26] 2025-11-23 17:32:37,215 | INFO     | exeerrorcode: 0
[2025-11-23 12:33:26] 2025-11-23 17:32:37,215 | INFO     | exeerrordiag: 
[2025-11-23 12:33:26] 2025-11-23 17:32:37,216 | INFO     | exitcode: 0
[2025-11-23 12:33:26] 2025-11-23 17:32:37,216 | INFO     | exitmsg: OK
[2025-11-23 12:33:26] 2025-11-23 17:32:37,216 | INFO     | cpuconsumptiontime: 538579 s
[2025-11-23 12:33:26] 2025-11-23 17:32:37,216 | INFO     | nevents: 1000
[2025-11-23 12:33:26] 2025-11-23 17:32:37,216 | INFO     | neventsw: 0
[2025-11-23 12:33:26] 2025-11-23 17:32:37,216 | INFO     | pid: 32339
[2025-11-23 12:33:26] 2025-11-23 17:32:37,217 | INFO     | pgrp: 32339
[2025-11-23 12:33:26] 2025-11-23 17:32:37,217 | INFO     | corecount: 8
[2025-11-23 12:33:26] 2025-11-23 17:32:37,217 | INFO     | event service: False
[2025-11-23 12:33:26] 2025-11-23 17:32:37,217 | INFO     | sizes: {0: 2298636, 1: 2298835, 2: 2298835, 4: 2299125, 12: 2299153, 69765: 2355640, 69766: 2355767, 69770: 2364817, 69772: 2364873, 69777: 2365119}
[2025-11-23 12:33:26] 2025-11-23 17:32:37,217 | INFO     | --------------------------------------------------
[2025-11-23 12:33:26] 2025-11-23 17:32:37,217 | INFO     | 
[2025-11-23 12:33:26] 2025-11-23 17:32:37,218 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 12:33:26] 2025-11-23 17:32:37,239 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,240 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,240 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,240 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,242 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,242 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,242 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,242 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,243 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 12:33:26] 2025-11-23 17:32:37,243 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,243 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 12:33:26] 2025-11-23 17:32:37,243 | INFO     | job 6895332449 has completed (purged errors)
[2025-11-23 12:33:26] 2025-11-23 17:32:37,243 | INFO     | overall cleanup function is called
[2025-11-23 12:33:26] 2025-11-23 17:32:38,259 | INFO     | --- collectZombieJob: --- 10, [32339]
[2025-11-23 12:33:26] 2025-11-23 17:32:38,259 | INFO     | zombie collector waiting for pid 32339
[2025-11-23 12:33:26] 2025-11-23 17:32:38,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 12:33:26] 2025-11-23 17:32:38,259 | INFO     | collected zombie processes
[2025-11-23 12:33:26] 2025-11-23 17:32:38,259 | INFO     | will attempt to kill all subprocesses of pid=32339
[2025-11-23 12:33:26] 2025-11-23 17:32:38,407 | INFO     | process IDs to be killed: [32339] (in reverse order)
[2025-11-23 12:33:26] 2025-11-23 17:32:38,469 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 12:33:26] 2025-11-23 17:32:38,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 12:33:26] 2025-11-23 17:32:38,475 | INFO     | did not find any defunct processes belonging to 32339
[2025-11-23 12:33:26] 2025-11-23 17:32:38,480 | INFO     | did not find any defunct processes belonging to 32339
[2025-11-23 12:33:26] 2025-11-23 17:32:38,482 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 12:33:26] 2025-11-23 17:32:38,482 | INFO     | ready for new job
[2025-11-23 12:33:26] 2025-11-23 17:32:38,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 12:33:26] 2025-11-23 17:32:38,487 | INFO     | ***************************************
[2025-11-23 12:33:26] 2025-11-23 17:32:38,487 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 12:33:26] 2025-11-23 17:32:38,487 | INFO     | ***************************************
[2025-11-23 12:33:26] 2025-11-23 17:32:38,488 | INFO     | 
[2025-11-23 12:33:26] 2025-11-23 17:32:38,489 | INFO     | architecture information:
[2025-11-23 12:33:26] 2025-11-23 17:32:38,489 | INFO     | executing command: cat /etc/os-release
[2025-11-23 12:33:26] 2025-11-23 17:32:38,505 | INFO     | cat /etc/os-release:
[2025-11-23 12:33:26] NAME="CentOS Linux"
[2025-11-23 12:33:26] VERSION="7 (Core)"
[2025-11-23 12:33:26] ID="centos"
[2025-11-23 12:33:26] ID_LIKE="rhel fedora"
[2025-11-23 12:33:26] VERSION_ID="7"
[2025-11-23 12:33:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 12:33:26] ANSI_COLOR="0;31"
[2025-11-23 12:33:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 12:33:26] HOME_URL="https://www.centos.org/"
[2025-11-23 12:33:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 12:33:26] 
[2025-11-23 12:33:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 12:33:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 12:33:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 12:33:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 12:33:26] 
[2025-11-23 12:33:26] 2025-11-23 17:32:38,505 | INFO     | ***************************************
[2025-11-23 12:33:26] 2025-11-23 17:32:39,008 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 12:33:26] 2025-11-23 17:32:39,033 | INFO     | sufficient remaining disk space (26639073280 B)
[2025-11-23 12:33:26] 2025-11-23 17:32:39,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 12:33:26] 2025-11-23 17:32:39,033 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 12:33:26] 2025-11-23 17:32:39,034 | INFO     | update_server=False
[2025-11-23 12:33:26] 2025-11-23 17:32:39,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 12:33:26] 2025-11-23 17:32:39,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:33:26] 2025-11-23 17:32:39,034 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:33:26] 2025-11-23 17:32:39,035 | INFO     | aborting loop
[2025-11-23 12:33:26] 2025-11-23 17:32:39,298 | INFO     | all job control threads have been joined
[2025-11-23 12:33:26] 2025-11-23 17:32:39,389 | INFO     | all data control threads have been joined
[2025-11-23 12:33:26] 2025-11-23 17:32:39,572 | INFO     | all payload control threads have been joined
[2025-11-23 12:33:26] 2025-11-23 17:32:40,040 | INFO     | [job] retrieve thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:40,040 | INFO     | [job] job monitor thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:40,041 | INFO     | [job] queue monitor thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:40,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 12:33:26] 2025-11-23 17:32:40,267 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:40,303 | INFO     | [job] control thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:40,385 | INFO     | [data] copytool_in thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:40,394 | INFO     | [data] control thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:40,426 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:40,577 | INFO     | [payload] control thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:40,660 | INFO     | [job] validate thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:40,907 | INFO     | [payload] validate_post thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:41,342 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:41,383 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:41,576 | INFO     | [payload] failed_post thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:42,179 | INFO     | [data] copytool_out thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:32:42,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 12:33:26] 2025-11-23 17:32:46,251 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 12:33:26] 2025-11-23 17:33:09,082 | INFO     | PID=25235 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 12:33:26] 2025-11-23 17:33:09,083 | INFO     | .. there are 3 such processes running
[2025-11-23 12:33:26] 2025-11-23 17:33:09,083 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 12:33:26] 2025-11-23 17:33:09,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 12:33:26] 2025-11-23 17:33:09,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 12:33:26] 2025-11-23 17:33:19,236 | INFO     | [monitor] cgroup control has ended
[2025-11-23 12:33:26] 2025-11-23 17:33:20,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548306495296)>', '<ExcThread(monitor, started 140547998066432)>']
[2025-11-23 12:33:26] 2025-11-23 17:33:21,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 12:33:26] 2025-11-23 17:33:21,145 | INFO     | [monitor] control thread has ended
[2025-11-23 12:33:26] 2025-11-23 17:33:26,022 | INFO     | all workflow threads have been joined
[2025-11-23 12:33:26] 2025-11-23 17:33:26,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 12:33:26] 2025-11-23 17:33:26,022 | INFO     | traces error code: 0
[2025-11-23 12:33:26] 2025-11-23 17:33:26,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 12:33:26] 2025-11-23 17:33:26,151 [wrapper] ==== pilot stdout END ====
[2025-11-23 12:33:26] 2025-11-23 17:33:26,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 12:33:26] 2025-11-23 17:33:26,162 [wrapper] pilotpid: 25235
[2025-11-23 12:33:26] 2025-11-23 17:33:26,164 [wrapper] Pilot exit status: 0
[2025-11-23 12:33:26] 2025-11-23 17:33:26,170 [wrapper] pandaids: 6895332449
[2025-11-23 12:33:26] 2025-11-23 17:33:26,211 [wrapper] cleanup supervisor_pilot 28047 25236
[2025-11-23 12:33:26] 2025-11-23 17:33:26,214 [wrapper] Test setup, not cleaning
[2025-11-23 12:33:26] 2025-11-23 17:33:26,216 [wrapper] apfmon messages muted
[2025-11-23 12:33:26] 2025-11-23 17:33:26,218 [wrapper] ==== wrapper stdout END ====
[2025-11-23 12:33:26] 2025-11-23 17:33:26,220 [wrapper] ==== wrapper stderr END ====
[2025-11-23 12:33:26]  *** Error codes and diagnostics ***
[2025-11-23 12:33:26]     "exeErrorCode": 0,
[2025-11-23 12:33:26]     "exeErrorDiag": "",
[2025-11-23 12:33:26]     "pilotErrorCode": 0,
[2025-11-23 12:33:26]     "pilotErrorDiag": "",
[2025-11-23 12:33:26]  *** Listing of results directory ***
[2025-11-23 12:33:26] total 1335200
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 18:51 pilot3.tar.gz
[2025-11-23 12:33:26] -rwx------ 1 boincer umatlas     36292 Nov 21 19:17 runpilot2-wrapper.sh
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 19:17 queuedata.json
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas       100 Nov 22 17:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 12:33:26] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 17:09 run_atlas
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas       105 Nov 22 17:09 job.xml
[2025-11-23 12:33:26] -rw-r--r-- 2 boincer umatlas 410269471 Nov 22 17:09 EVNT.47483658._000188.pool.root.1
[2025-11-23 12:33:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 17:09 start_atlas.sh
[2025-11-23 12:33:26] drwxrwx--x 2 boincer umatlas      4096 Nov 22 17:09 shared
[2025-11-23 12:33:26] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 17:09 input.tar.gz
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas         0 Nov 22 17:09 boinc_lockfile
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas      2786 Nov 22 17:09 pandaJob.out
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas        57 Nov 22 17:09 setup.sh.local
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas    989768 Nov 22 17:09 agis_schedconf.cvmfs.json
[2025-11-23 12:33:26] drwx------ 5 boincer umatlas      4096 Nov 22 17:09 pilot3
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas       533 Nov 23 12:16 boinc_task_state.xml
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas 929018073 Nov 23 12:31 HITS.47556137._001880.pool.root.1
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas      5952 Nov 23 12:31 init_data.xml
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas        95 Nov 23 12:32 pilot_heartbeat.json
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas      1068 Nov 23 12:32 memory_monitor_summary.json
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas   1526164 Nov 23 12:32 agis_ddmendpoints.agis.ALL.json
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas   2318834 Nov 23 12:32 log.47556137._001880.job.log.tgz.1
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas      8661 Nov 23 12:32 heartbeat.json
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 12:33 boinc_mmap_file
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas        29 Nov 23 12:33 wrapper_checkpoint.txt
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas      4821 Nov 23 12:33 pilotlog.txt
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas   9695975 Nov 23 12:33 log.47556137._001880.job.log.1
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas       353 Nov 23 12:33 output.list
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas       620 Nov 23 12:33 runtime_log
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas  12032000 Nov 23 12:33 result.tar.gz
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas       668 Nov 23 12:33 TZnLDmEVqg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMsHKDmqS7Ibn.diag
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 12:33 runtime_log.err
[2025-11-23 12:33:26] -rw-r--r-- 1 boincer umatlas     21327 Nov 23 12:33 stderr.txt
[2025-11-23 12:33:26] HITS file was successfully produced:
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas 929018073 Nov 23 12:31 shared/HITS.pool.root.1
[2025-11-23 12:33:26]  *** Contents of shared directory: ***
[2025-11-23 12:33:26] total 1320256
[2025-11-23 12:33:26] -rw-r--r-- 2 boincer umatlas 410269471 Nov 22 17:09 ATLAS.root_0
[2025-11-23 12:33:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 17:09 start_atlas.sh
[2025-11-23 12:33:26] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 17:09 input.tar.gz
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas 929018073 Nov 23 12:31 HITS.pool.root.1
[2025-11-23 12:33:26] -rw------- 1 boincer umatlas  12032000 Nov 23 12:33 result.tar.gz
12:33:27 (21142): run_atlas exited; CPU time 537649.359235
12:33:27 (21142): called boinc_finish(0)

</stderr_txt>
]]>

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