Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:52:03 (1194882): wrapper (7.7.26015): starting
01:52:03 (1194882): wrapper: running run_atlas (--nthreads 12)
[2025-11-28 01:52:03] Arguments: --nthreads 12
[2025-11-28 01:52:03] Threads: 12
[2025-11-28 01:52:03] Checking for CVMFS
[2025-11-28 01:52:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 01:52:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 01:52:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 01:52:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 01:52:04] 2.13.3.0 298910 1763 58456 153402 3 81 3399487 6144000 3114 130560 0 2404732 99.992 78697 542 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-28 01:52:04] CVMFS is ok
[2025-11-28 01:52:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 01:52:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-28 01:52:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-28 01:52:04] Further information can be found at the LHC@home message board.
[2025-11-28 01:52:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 01:52:04] Checking for apptainer binary...
[2025-11-28 01:52:04] apptainer is not installed, using version from CVMFS
[2025-11-28 01:52:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 01:52:05] XeonFire
[2025-11-28 01:52:05] apptainer works
[2025-11-28 01:52:05] Set ATHENA_PROC_NUMBER=12
[2025-11-28 01:52:05] Set ATHENA_CORE_NUMBER=12
[2025-11-28 01:52:05] Starting ATLAS job with PandaID=6895324678
[2025-11-28 01:52:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 07:38:55]  *** The last 200 lines of the pilot log: ***
[2025-11-28 07:38:55] 2025-11-28 13:37:47,616 | INFO     | time since job start (20727s) is within the limit (172800.0s)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,562 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 07:38:55] 2025-11-28 13:37:49,573 | INFO     | found 44 cores (22 cores per socket, 2 sockets) HT, CPU MHz: 2625.842965909091
[2025-11-28 07:38:55] 2025-11-28 13:37:49,581 | INFO     | using path: /var/lib/boinc-client/slots/11/PanDA_Pilot-6895324678/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,581 | INFO     | extracted standard info from prmon json
[2025-11-28 07:38:55] 2025-11-28 13:37:49,581 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 07:38:55] 2025-11-28 13:37:49,581 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 07:38:55] 2025-11-28 13:37:49,585 | INFO     | fitting pss+swap vs Time
[2025-11-28 07:38:55] 2025-11-28 13:37:49,585 | INFO     | sum of square deviations: 12187445183.576445
[2025-11-28 07:38:55] 2025-11-28 13:37:49,587 | INFO     | sum of deviations: 277648586873.49396
[2025-11-28 07:38:55] 2025-11-28 13:37:49,587 | INFO     | mean x: 1764326711.4352942
[2025-11-28 07:38:55] 2025-11-28 13:37:49,587 | INFO     | mean y: 3386499.9088235293
[2025-11-28 07:38:55] 2025-11-28 13:37:49,587 | INFO     | intersect: -40190666546.85257
[2025-11-28 07:38:55] 2025-11-28 13:37:49,588 | INFO     | chi2: 7.655655636696059
[2025-11-28 07:38:55] 2025-11-28 13:37:49,588 | INFO     | sum of square deviations: 11657727584.137316
[2025-11-28 07:38:55] 2025-11-28 13:37:49,590 | INFO     | sum of deviations: 426590993945.5344
[2025-11-28 07:38:55] 2025-11-28 13:37:49,590 | INFO     | mean x: 1764326558.9492538
[2025-11-28 07:38:55] 2025-11-28 13:37:49,590 | INFO     | mean y: 3429377.7373134326
[2025-11-28 07:38:55] 2025-11-28 13:37:49,590 | INFO     | intersect: -64558537351.59275
[2025-11-28 07:38:55] 2025-11-28 13:37:49,590 | INFO     | chi2: 3.8170625362778474
[2025-11-28 07:38:55] 2025-11-28 13:37:49,590 | INFO     | current chi2=3.8170625362778474 (change=50.14061868220118 %)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,590 | INFO     | sum of square deviations: 11143530735.818174
[2025-11-28 07:38:55] 2025-11-28 13:37:49,592 | INFO     | sum of deviations: 443071411655.909
[2025-11-28 07:38:55] 2025-11-28 13:37:49,592 | INFO     | mean x: 1764326406.4545455
[2025-11-28 07:38:55] 2025-11-28 13:37:49,592 | INFO     | mean y: 3434186.4272727272
[2025-11-28 07:38:55] 2025-11-28 13:37:49,592 | INFO     | intersect: -70146916726.76715
[2025-11-28 07:38:55] 2025-11-28 13:37:49,593 | INFO     | chi2: 3.509596015814717
[2025-11-28 07:38:55] 2025-11-28 13:37:49,593 | INFO     | current chi2=3.509596015814717 (change=8.05505588501445 %)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,593 | INFO     | right removable region: 329
[2025-11-28 07:38:55] 2025-11-28 13:37:49,593 | INFO     | sum of square deviations: 11657533604.137316
[2025-11-28 07:38:55] 2025-11-28 13:37:49,595 | INFO     | sum of deviations: 140531326207.27182
[2025-11-28 07:38:55] 2025-11-28 13:37:49,595 | INFO     | mean x: 1764326863.9492538
[2025-11-28 07:38:55] 2025-11-28 13:37:49,595 | INFO     | mean y: 3425924.4865671643
[2025-11-28 07:38:55] 2025-11-28 13:37:49,595 | INFO     | intersect: -21265497886.799656
[2025-11-28 07:38:55] 2025-11-28 13:37:49,596 | INFO     | chi2: 4.655177901706597
[2025-11-28 07:38:55] 2025-11-28 13:37:49,596 | INFO     | current chi2=4.655177901706597 (change=39.19295586660393 %)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,596 | INFO     | sum of square deviations: 11143264897.818174
[2025-11-28 07:38:55] 2025-11-28 13:37:49,598 | INFO     | sum of deviations: 96197105990.45442
[2025-11-28 07:38:55] 2025-11-28 13:37:49,598 | INFO     | mean x: 1764327016.4545455
[2025-11-28 07:38:55] 2025-11-28 13:37:49,598 | INFO     | mean y: 3439013.5636363635
[2025-11-28 07:38:55] 2025-11-28 13:37:49,598 | INFO     | intersect: -15227568645.325594
[2025-11-28 07:38:55] 2025-11-28 13:37:49,598 | INFO     | chi2: 4.288311306962225
[2025-11-28 07:38:55] 2025-11-28 13:37:49,598 | INFO     | current chi2=4.288311306962225 (change=7.880828670583736 %)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,598 | INFO     | left removable region: 20
[2025-11-28 07:38:55] 2025-11-28 13:37:49,599 | INFO     | sum of square deviations: 9148527711.792917
[2025-11-28 07:38:55] 2025-11-28 13:37:49,600 | INFO     | sum of deviations: 230540534049.05502
[2025-11-28 07:38:55] 2025-11-28 13:37:49,600 | INFO     | mean x: 1764326985.9741101
[2025-11-28 07:38:55] 2025-11-28 13:37:49,600 | INFO     | mean y: 3499086.381877023
[2025-11-28 07:38:55] 2025-11-28 13:37:49,600 | INFO     | intersect: -44457084998.56449
[2025-11-28 07:38:55] 2025-11-28 13:37:49,601 | INFO     | chi2: 0.02958128457188561
[2025-11-28 07:38:55] 2025-11-28 13:37:49,601 | INFO     | current memory leak: 25.20 B/s (using 309 data points, chi2=0.03)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,601 | INFO     | could have reported an average CPU frequency of 2741 MHz (15 samples)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,601 | INFO     | ..............................
[2025-11-28 07:38:55] 2025-11-28 13:37:49,601 | INFO     | . Timing measurements:
[2025-11-28 07:38:55] 2025-11-28 13:37:49,601 | INFO     | . get job = 0 s
[2025-11-28 07:38:55] 2025-11-28 13:37:49,601 | INFO     | . initial setup = 3 s
[2025-11-28 07:38:55] 2025-11-28 13:37:49,602 | INFO     | . payload setup = 7 s
[2025-11-28 07:38:55] 2025-11-28 13:37:49,602 | INFO     | . stage-in = 0 s
[2025-11-28 07:38:55] 2025-11-28 13:37:49,602 | INFO     | . payload execution = 20690 s
[2025-11-28 07:38:55] 2025-11-28 13:37:49,602 | INFO     | . stage-out = 3 s
[2025-11-28 07:38:55] 2025-11-28 13:37:49,602 | INFO     | . log creation = 0 s
[2025-11-28 07:38:55] 2025-11-28 13:37:49,602 | INFO     | ..............................
[2025-11-28 07:38:55] 2025-11-28 13:37:49,636 | INFO     | time since job start (20729s) is within the limit (172800.0s)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,685 | INFO     | 
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | job summary report
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | --------------------------------------------------
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | PanDA job id: 6895324678
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | task id: 47556137
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | errors: (none)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | pilot state: finished 
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | transexitcode: 0
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | exeerrorcode: 0
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | exeerrordiag: 
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | exitcode: 0
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | exitmsg: OK
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | cpuconsumptiontime: 240990 s
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | nevents: 1000
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | neventsw: 0
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | pid: 1206010
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | pgrp: 1206010
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | corecount: 12
[2025-11-28 07:38:55] 2025-11-28 13:37:49,686 | INFO     | event service: False
[2025-11-28 07:38:55] 2025-11-28 13:37:49,687 | INFO     | sizes: {0: 2284319, 5: 2284581, 11: 2284637, 20701: 2318830, 20705: 2327840, 20707: 2327896, 20712: 2328270}
[2025-11-28 07:38:55] 2025-11-28 13:37:49,687 | INFO     | --------------------------------------------------
[2025-11-28 07:38:55] 2025-11-28 13:37:49,687 | INFO     | 
[2025-11-28 07:38:55] 2025-11-28 13:37:49,687 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/11
[2025-11-28 07:38:55] 2025-11-28 13:37:49,712 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,713 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,714 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,714 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 07:38:55] 2025-11-28 13:37:49,714 | INFO     | job 6895324678 has completed (purged errors)
[2025-11-28 07:38:55] 2025-11-28 13:37:49,714 | INFO     | overall cleanup function is called
[2025-11-28 07:38:55] 2025-11-28 13:37:50,729 | INFO     | --- collectZombieJob: --- 10, [1206010]
[2025-11-28 07:38:55] 2025-11-28 13:37:50,729 | INFO     | zombie collector waiting for pid 1206010
[2025-11-28 07:38:55] 2025-11-28 13:37:50,730 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 07:38:55] 2025-11-28 13:37:50,730 | INFO     | collected zombie processes
[2025-11-28 07:38:55] 2025-11-28 13:37:50,730 | INFO     | will attempt to kill all subprocesses of pid=1206010
[2025-11-28 07:38:55] 2025-11-28 13:37:51,156 | INFO     | process IDs to be killed: [1206010] (in reverse order)
[2025-11-28 07:38:55] 2025-11-28 13:37:51,333 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 07:38:55] 2025-11-28 13:37:51,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 07:38:55] 2025-11-28 13:37:51,341 | INFO     | did not find any defunct processes belonging to 1206010
[2025-11-28 07:38:55] 2025-11-28 13:37:51,351 | INFO     | did not find any defunct processes belonging to 1206010
[2025-11-28 07:38:55] 2025-11-28 13:37:51,354 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 07:38:55] 2025-11-28 13:37:51,354 | INFO     | ready for new job
[2025-11-28 07:38:55] 2025-11-28 13:37:51,354 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 07:38:55] 2025-11-28 13:37:51,357 | INFO     | ***************************************
[2025-11-28 07:38:55] 2025-11-28 13:37:51,358 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 07:38:55] 2025-11-28 13:37:51,358 | INFO     | ***************************************
[2025-11-28 07:38:55] 2025-11-28 13:37:51,358 | INFO     | 
[2025-11-28 07:38:55] 2025-11-28 13:37:51,364 | INFO     | architecture information:
[2025-11-28 07:38:55] 2025-11-28 13:37:51,366 | INFO     | executing command: cat /etc/os-release
[2025-11-28 07:38:55] 2025-11-28 13:37:51,386 | INFO     | cat /etc/os-release:
[2025-11-28 07:38:55] NAME="CentOS Linux"
[2025-11-28 07:38:55] VERSION="7 (Core)"
[2025-11-28 07:38:55] ID="centos"
[2025-11-28 07:38:55] ID_LIKE="rhel fedora"
[2025-11-28 07:38:55] VERSION_ID="7"
[2025-11-28 07:38:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 07:38:55] ANSI_COLOR="0;31"
[2025-11-28 07:38:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 07:38:55] HOME_URL="https://www.centos.org/"
[2025-11-28 07:38:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 07:38:55] 
[2025-11-28 07:38:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 07:38:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 07:38:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 07:38:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 07:38:55] 
[2025-11-28 07:38:55] 2025-11-28 13:37:51,386 | INFO     | ***************************************
[2025-11-28 07:38:55] 2025-11-28 13:37:51,889 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/11
[2025-11-28 07:38:55] 2025-11-28 13:37:51,913 | INFO     | sufficient remaining disk space (1780193689600 B)
[2025-11-28 07:38:55] 2025-11-28 13:37:51,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 07:38:55] 2025-11-28 13:37:51,913 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 07:38:55] 2025-11-28 13:37:51,913 | INFO     | update_server=False
[2025-11-28 07:38:55] 2025-11-28 13:37:51,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 07:38:55] 2025-11-28 13:37:51,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:38:55] 2025-11-28 13:37:51,914 | INFO     | aborting loop
[2025-11-28 07:38:55] 2025-11-28 13:37:52,137 | INFO     | all payload control threads have been joined
[2025-11-28 07:38:55] 2025-11-28 13:37:52,238 | INFO     | all data control threads have been joined
[2025-11-28 07:38:55] 2025-11-28 13:37:52,362 | INFO     | all job control threads have been joined
[2025-11-28 07:38:55] 2025-11-28 13:37:52,916 | INFO     | [job] retrieve thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:52,919 | INFO     | [job] job monitor thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:53,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 07:38:55] 2025-11-28 13:37:53,134 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:53,143 | INFO     | [payload] control thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:53,243 | INFO     | [data] control thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:53,322 | INFO     | [payload] failed_post thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:53,367 | INFO     | [job] control thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:53,397 | INFO     | [data] copytool_in thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:53,399 | INFO     | [job] validate thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:53,922 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:53,988 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:54,116 | INFO     | [payload] validate_post thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:54,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:38:55] 2025-11-28 13:37:54,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 07:38:55] 2025-11-28 13:37:55,079 | INFO     | [data] copytool_out thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:55,700 | INFO     | [job] queue monitor thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:37:59,001 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:38:02,112 | INFO     | job.realtimelogging is not enabled
[2025-11-28 07:38:55] 2025-11-28 13:38:03,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 07:38:55] 2025-11-28 13:38:23,186 | INFO     | PID=1198973 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 07:38:55] 2025-11-28 13:38:23,186 | INFO     | .. there are 4 such processes running
[2025-11-28 07:38:55] 2025-11-28 13:38:23,187 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 07:38:55] 2025-11-28 13:38:23,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 07:38:55] 2025-11-28 13:38:23,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 07:38:55] 2025-11-28 13:38:49,225 | INFO     | [monitor] cgroup control has ended
[2025-11-28 07:38:55] 2025-11-28 13:38:50,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123824981796672)>', '<ExcThread(monitor, started 123824309794560)>']
[2025-11-28 07:38:55] 2025-11-28 13:38:50,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 07:38:55] 2025-11-28 13:38:50,295 | INFO     | [monitor] control thread has ended
[2025-11-28 07:38:55] 2025-11-28 13:38:55,186 | INFO     | all workflow threads have been joined
[2025-11-28 07:38:55] 2025-11-28 13:38:55,186 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 07:38:55] 2025-11-28 13:38:55,187 | INFO     | traces error code: 0
[2025-11-28 07:38:55] 2025-11-28 13:38:55,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 07:38:55] 2025-11-28 13:38:55,289 [wrapper] ==== pilot stdout END ====
[2025-11-28 07:38:55] 2025-11-28 13:38:55,292 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 07:38:55] 2025-11-28 13:38:55,295 [wrapper] pilotpid: 1198973
[2025-11-28 07:38:55] 2025-11-28 13:38:55,297 [wrapper] Pilot exit status: 0
[2025-11-28 07:38:55] 2025-11-28 13:38:55,312 [wrapper] pandaids: 6895324678
[2025-11-28 07:38:55] 2025-11-28 13:38:55,397 [wrapper] cleanup supervisor_pilot 1424416 1198974
[2025-11-28 07:38:55] 2025-11-28 13:38:55,401 [wrapper] Test setup, not cleaning
[2025-11-28 07:38:55] 2025-11-28 13:38:55,407 [wrapper] apfmon messages muted
[2025-11-28 07:38:55] 2025-11-28 13:38:55,411 [wrapper] ==== wrapper stdout END ====
[2025-11-28 07:38:55] 2025-11-28 13:38:55,413 [wrapper] ==== wrapper stderr END ====
[2025-11-28 07:38:55]  *** Error codes and diagnostics ***
[2025-11-28 07:38:55]     "exeErrorCode": 0,
[2025-11-28 07:38:55]     "exeErrorDiag": "",
[2025-11-28 07:38:55]     "pilotErrorCode": 0,
[2025-11-28 07:38:55]     "pilotErrorDiag": "",
[2025-11-28 07:38:55]  *** Listing of results directory ***
[2025-11-28 07:38:55] total 1308736
[2025-11-28 07:38:55] -rw-r--r-- 1 mark mark    576529 Nov 21 08:24 pilot3.tar.gz
[2025-11-28 07:38:55] -rwx------ 1 mark mark     36292 Nov 21 08:32 runpilot2-wrapper.sh
[2025-11-28 07:38:55] -rw-r--r-- 1 mark mark      5112 Nov 21 08:32 queuedata.json
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark       100 Nov 28 01:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 07:38:55] -rwxr-xr-x 1 mark mark      7986 Nov 28 01:52 run_atlas
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark       105 Nov 28 01:52 job.xml
[2025-11-28 07:38:55] -rw-r--r-- 2 mark mark 410695237 Nov 28 01:52 EVNT.47483658._000028.pool.root.1
[2025-11-28 07:38:55] -rw-r--r-- 2 mark mark     15847 Nov 28 01:52 start_atlas.sh
[2025-11-28 07:38:55] drwxrwx--x 2 mark mark      4096 Nov 28 01:52 shared
[2025-11-28 07:38:55] -rw-r--r-- 2 mark mark    590098 Nov 28 01:52 input.tar.gz
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark      9264 Nov 28 01:52 init_data.xml
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark         0 Nov 28 01:52 boinc_setup_complete
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark         0 Nov 28 01:52 boinc_lockfile
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark      2784 Nov 28 01:52 pandaJob.out
[2025-11-28 07:38:55] -rw------- 1 mark mark    991842 Nov 28 01:52 agis_schedconf.cvmfs.json
[2025-11-28 07:38:55] drwx------ 5 mark mark      4096 Nov 28 01:52 pilot3
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark       532 Nov 28 07:29 boinc_task_state.xml
[2025-11-28 07:38:55] -rw------- 1 mark mark 915494557 Nov 28 07:37 HITS.47556137._000279.pool.root.1
[2025-11-28 07:38:55] -rw------- 1 mark mark      1044 Nov 28 07:37 memory_monitor_summary.json
[2025-11-28 07:38:55] -rw------- 1 mark mark   1516240 Nov 28 07:37 agis_ddmendpoints.agis.ALL.json
[2025-11-28 07:38:55] -rw------- 1 mark mark   2090744 Nov 28 07:37 log.47556137._000279.job.log.tgz.1
[2025-11-28 07:38:55] -rw------- 1 mark mark      8587 Nov 28 07:37 heartbeat.json
[2025-11-28 07:38:55] -rw------- 1 mark mark        95 Nov 28 07:38 pilot_heartbeat.json
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark      8192 Nov 28 07:38 boinc_mmap_file
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark        29 Nov 28 07:38 wrapper_checkpoint.txt
[2025-11-28 07:38:55] -rw------- 1 mark mark      4905 Nov 28 07:38 pilotlog.txt
[2025-11-28 07:38:55] -rw------- 1 mark mark   2923743 Nov 28 07:38 log.47556137._000279.job.log.1
[2025-11-28 07:38:55] -rw------- 1 mark mark       353 Nov 28 07:38 output.list
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark       620 Nov 28 07:38 runtime_log
[2025-11-28 07:38:55] -rw------- 1 mark mark   5038080 Nov 28 07:38 result.tar.gz
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark      8904 Nov 28 07:38 runtime_log.err
[2025-11-28 07:38:55] -rw------- 1 mark mark       651 Nov 28 07:38 a5GKDmHMhg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrfHKDm9prAim.diag
[2025-11-28 07:38:55] -rw-rw-r-- 1 mark mark     21395 Nov 28 07:38 stderr.txt
[2025-11-28 07:38:55] HITS file was successfully produced:
[2025-11-28 07:38:55] -rw------- 1 mark mark 915494557 Nov 28 07:37 shared/HITS.pool.root.1
[2025-11-28 07:38:55]  *** Contents of shared directory: ***
[2025-11-28 07:38:55] total 1300636
[2025-11-28 07:38:55] -rw-r--r-- 2 mark mark 410695237 Nov 28 01:52 ATLAS.root_0
[2025-11-28 07:38:55] -rw-r--r-- 2 mark mark     15847 Nov 28 01:52 start_atlas.sh
[2025-11-28 07:38:55] -rw-r--r-- 2 mark mark    590098 Nov 28 01:52 input.tar.gz
[2025-11-28 07:38:55] -rw------- 1 mark mark 915494557 Nov 28 07:37 HITS.pool.root.1
[2025-11-28 07:38:55] -rw------- 1 mark mark   5038080 Nov 28 07:38 result.tar.gz
07:38:57 (1194882): run_atlas exited; CPU time 241616.593060
07:38:57 (1194882): called boinc_finish(0)

</stderr_txt>
]]>

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