Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:41:36 (26460): wrapper (7.7.26015): starting
16:41:36 (26460): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 16:41:36] Arguments: --nthreads 12
[2025-11-22 16:41:36] Threads: 12
[2025-11-22 16:41:36] Checking for CVMFS
[2025-11-22 16:41:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 16:41:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 16:41:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 16:41:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 16:41:36] 2.11.2.0 2998 282429 98384 153185 0 82 11461766 20275200 1 130560 1 127295456 99.967 16723232 14418 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 16:41:36] CVMFS is ok
[2025-11-22 16:41:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 16:41:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 16:41:36] Further information can be found at the LHC@home message board.
[2025-11-22 16:41:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 16:41:36] Checking for apptainer binary...
[2025-11-22 16:41:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 16:41:36] Running /usr/bin/apptainer --version
[2025-11-22 16:41:36] apptainer version 1.3.2-1.el7
[2025-11-22 16:41:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 16:41:37] c-205-25.aglt2.org
[2025-11-22 16:41:37] apptainer works
[2025-11-22 16:41:37] Set ATHENA_PROC_NUMBER=12
[2025-11-22 16:41:37] Set ATHENA_CORE_NUMBER=12
[2025-11-22 16:41:37] Starting ATLAS job with PandaID=6895332000
[2025-11-22 16:41:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:55:40]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:55:40] 2025-11-23 04:55:13,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:55:40] 2025-11-23 04:55:13,796 | INFO     | time since job start (26001s) is within the limit (172800.0s)
[2025-11-22 23:55:40] 2025-11-23 04:55:14,917 | INFO     | PID=30138 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 23:55:40] 2025-11-23 04:55:15,616 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 23:55:40] 2025-11-23 04:55:15,620 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-22 23:55:40] 2025-11-23 04:55:15,623 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895332000/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 23:55:40] 2025-11-23 04:55:15,624 | INFO     | extracted standard info from prmon json
[2025-11-22 23:55:40] 2025-11-23 04:55:15,624 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 23:55:40] 2025-11-23 04:55:15,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 23:55:40] 2025-11-23 04:55:15,631 | INFO     | fitting pss+swap vs Time
[2025-11-22 23:55:40] 2025-11-23 04:55:15,632 | INFO     | sum of square deviations: 23971975433.11967
[2025-11-22 23:55:40] 2025-11-23 04:55:15,636 | INFO     | sum of deviations: 400756170956.1265
[2025-11-22 23:55:40] 2025-11-23 04:55:15,636 | INFO     | mean x: 1763860703.7535212
[2025-11-22 23:55:40] 2025-11-23 04:55:15,636 | INFO     | mean y: 3426603.248826291
[2025-11-22 23:55:40] 2025-11-23 04:55:15,636 | INFO     | intersect: -29484258452.5108
[2025-11-22 23:55:40] 2025-11-23 04:55:15,636 | INFO     | chi2: 5.46613741503762
[2025-11-22 23:55:40] 2025-11-23 04:55:15,637 | INFO     | sum of square deviations: 23137788080.29449
[2025-11-22 23:55:40] 2025-11-23 04:55:15,641 | INFO     | sum of deviations: 549083388331.11975
[2025-11-22 23:55:40] 2025-11-23 04:55:15,641 | INFO     | mean x: 1763860551.256532
[2025-11-22 23:55:40] 2025-11-23 04:55:15,641 | INFO     | mean y: 3453688.6840855107
[2025-11-22 23:55:40] 2025-11-23 04:55:15,641 | INFO     | intersect: -41854762173.02876
[2025-11-22 23:55:40] 2025-11-23 04:55:15,642 | INFO     | chi2: 2.937245866424953
[2025-11-22 23:55:40] 2025-11-23 04:55:15,642 | INFO     | current chi2=2.937245866424953 (change=46.26469033975543 %)
[2025-11-22 23:55:40] 2025-11-23 04:55:15,642 | INFO     | sum of square deviations: 22323182489.9615
[2025-11-22 23:55:40] 2025-11-23 04:55:15,646 | INFO     | sum of deviations: 581940825522.26
[2025-11-22 23:55:40] 2025-11-23 04:55:15,646 | INFO     | mean x: 1763860398.7596154
[2025-11-22 23:55:40] 2025-11-23 04:55:15,646 | INFO     | mean y: 3459796.122596154
[2025-11-22 23:55:40] 2025-11-23 04:55:15,646 | INFO     | intersect: -45978441620.56755
[2025-11-22 23:55:40] 2025-11-23 04:55:15,647 | INFO     | chi2: 2.6023338526588735
[2025-11-22 23:55:40] 2025-11-23 04:55:15,647 | INFO     | current chi2=2.6023338526588735 (change=11.40224649200767 %)
[2025-11-22 23:55:40] 2025-11-23 04:55:15,647 | INFO     | right removable region: 415
[2025-11-22 23:55:40] 2025-11-23 04:55:15,647 | INFO     | sum of square deviations: 23137722200.2945
[2025-11-22 23:55:40] 2025-11-23 04:55:15,651 | INFO     | sum of deviations: 254208290663.63876
[2025-11-22 23:55:40] 2025-11-23 04:55:15,651 | INFO     | mean x: 1763860856.256532
[2025-11-22 23:55:40] 2025-11-23 04:55:15,651 | INFO     | mean y: 3453319.0403800476
[2025-11-22 23:55:40] 2025-11-23 04:55:15,651 | INFO     | intersect: -19375638942.330452
[2025-11-22 23:55:40] 2025-11-23 04:55:15,652 | INFO     | chi2: 3.0003324044624193
[2025-11-22 23:55:40] 2025-11-23 04:55:15,652 | INFO     | current chi2=3.0003324044624193 (change=45.11055656580544 %)
[2025-11-22 23:55:40] 2025-11-23 04:55:15,653 | INFO     | sum of square deviations: 22323076410.478397
[2025-11-22 23:55:40] 2025-11-23 04:55:15,656 | INFO     | sum of deviations: 220760033533.08173
[2025-11-22 23:55:40] 2025-11-23 04:55:15,656 | INFO     | mean x: 1763861008.7572114
[2025-11-22 23:55:40] 2025-11-23 04:55:15,656 | INFO     | mean y: 3459574.139423077
[2025-11-22 23:55:40] 2025-11-23 04:55:15,657 | INFO     | intersect: -17439925391.30193
[2025-11-22 23:55:40] 2025-11-23 04:55:15,657 | INFO     | chi2: 2.9438201373752886
[2025-11-22 23:55:40] 2025-11-23 04:55:15,657 | INFO     | current chi2=2.9438201373752886 (change=1.8835335379199847 %)
[2025-11-22 23:55:40] 2025-11-23 04:55:15,657 | INFO     | left removable region: 20
[2025-11-22 23:55:40] 2025-11-23 04:55:15,658 | INFO     | sum of square deviations: 19110285157.174583
[2025-11-22 23:55:40] 2025-11-23 04:55:15,661 | INFO     | sum of deviations: 362322373751.3141
[2025-11-22 23:55:40] 2025-11-23 04:55:15,661 | INFO     | mean x: 1763860978.2556963
[2025-11-22 23:55:40] 2025-11-23 04:55:15,661 | INFO     | mean y: 3501580.7493670885
[2025-11-22 23:55:40] 2025-11-23 04:55:15,662 | INFO     | intersect: -33438505765.1738
[2025-11-22 23:55:40] 2025-11-23 04:55:15,662 | INFO     | chi2: 0.03851033673128314
[2025-11-22 23:55:40] 2025-11-23 04:55:15,662 | INFO     | current memory leak: 18.96 B/s (using 395 data points, chi2=0.04)
[2025-11-22 23:55:40] 2025-11-23 04:55:15,663 | INFO     | could have reported an average CPU frequency of 2384 MHz (18 samples)
[2025-11-22 23:55:40] 2025-11-23 04:55:15,663 | INFO     | ..............................
[2025-11-22 23:55:40] 2025-11-23 04:55:15,663 | INFO     | . Timing measurements:
[2025-11-22 23:55:40] 2025-11-23 04:55:15,663 | INFO     | . get job = 0 s
[2025-11-22 23:55:40] 2025-11-23 04:55:15,663 | INFO     | . initial setup = 2 s
[2025-11-22 23:55:40] 2025-11-23 04:55:15,663 | INFO     | . payload setup = 7 s
[2025-11-22 23:55:40] 2025-11-23 04:55:15,663 | INFO     | . stage-in = 0 s
[2025-11-22 23:55:40] 2025-11-23 04:55:15,664 | INFO     | . payload execution = 25962 s
[2025-11-22 23:55:40] 2025-11-23 04:55:15,664 | INFO     | . stage-out = 3 s
[2025-11-22 23:55:40] 2025-11-23 04:55:15,664 | INFO     | . log creation = 0 s
[2025-11-22 23:55:40] 2025-11-23 04:55:15,664 | INFO     | ..............................
[2025-11-22 23:55:40] 2025-11-23 04:55:15,918 | INFO     | time since job start (26003s) is within the limit (172800.0s)
[2025-11-22 23:55:40] 2025-11-23 04:55:16,035 | INFO     | 
[2025-11-22 23:55:40] 2025-11-23 04:55:16,035 | INFO     | job summary report
[2025-11-22 23:55:40] 2025-11-23 04:55:16,035 | INFO     | --------------------------------------------------
[2025-11-22 23:55:40] 2025-11-23 04:55:16,036 | INFO     | PanDA job id: 6895332000
[2025-11-22 23:55:40] 2025-11-23 04:55:16,036 | INFO     | task id: 47556137
[2025-11-22 23:55:40] 2025-11-23 04:55:16,036 | INFO     | errors: (none)
[2025-11-22 23:55:40] 2025-11-23 04:55:16,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:55:40] 2025-11-23 04:55:16,036 | INFO     | pilot state: finished 
[2025-11-22 23:55:40] 2025-11-23 04:55:16,036 | INFO     | transexitcode: 0
[2025-11-22 23:55:40] 2025-11-23 04:55:16,037 | INFO     | exeerrorcode: 0
[2025-11-22 23:55:40] 2025-11-23 04:55:16,037 | INFO     | exeerrordiag: 
[2025-11-22 23:55:40] 2025-11-23 04:55:16,037 | INFO     | exitcode: 0
[2025-11-22 23:55:40] 2025-11-23 04:55:16,037 | INFO     | exitmsg: OK
[2025-11-22 23:55:40] 2025-11-23 04:55:16,037 | INFO     | cpuconsumptiontime: 298062 s
[2025-11-22 23:55:40] 2025-11-23 04:55:16,037 | INFO     | nevents: 1000
[2025-11-22 23:55:40] 2025-11-23 04:55:16,038 | INFO     | neventsw: 0
[2025-11-22 23:55:40] 2025-11-23 04:55:16,038 | INFO     | pid: 4293
[2025-11-22 23:55:40] 2025-11-23 04:55:16,038 | INFO     | pgrp: 4293
[2025-11-22 23:55:40] 2025-11-23 04:55:16,038 | INFO     | corecount: 12
[2025-11-22 23:55:40] 2025-11-23 04:55:16,038 | INFO     | event service: False
[2025-11-22 23:55:40] 2025-11-23 04:55:16,038 | INFO     | sizes: {0: 2298756, 5: 2299018, 11: 2299074, 25973: 2336394, 25978: 2345388, 25980: 2345444, 25988: 2345818}
[2025-11-22 23:55:40] 2025-11-23 04:55:16,038 | INFO     | --------------------------------------------------
[2025-11-22 23:55:40] 2025-11-23 04:55:16,039 | INFO     | 
[2025-11-22 23:55:40] 2025-11-23 04:55:16,039 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 23:55:40] 2025-11-23 04:55:16,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,187 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,189 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:55:40] 2025-11-23 04:55:16,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:55:40] 2025-11-23 04:55:16,190 | INFO     | job 6895332000 has completed (purged errors)
[2025-11-22 23:55:40] 2025-11-23 04:55:16,190 | INFO     | overall cleanup function is called
[2025-11-22 23:55:40] 2025-11-23 04:55:17,207 | INFO     | --- collectZombieJob: --- 10, [4293]
[2025-11-22 23:55:40] 2025-11-23 04:55:17,207 | INFO     | zombie collector waiting for pid 4293
[2025-11-22 23:55:40] 2025-11-23 04:55:17,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:55:40] 2025-11-23 04:55:17,207 | INFO     | collected zombie processes
[2025-11-22 23:55:40] 2025-11-23 04:55:17,207 | INFO     | will attempt to kill all subprocesses of pid=4293
[2025-11-22 23:55:40] 2025-11-23 04:55:17,304 | INFO     | process IDs to be killed: [4293] (in reverse order)
[2025-11-22 23:55:40] 2025-11-23 04:55:17,353 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:55:40] 2025-11-23 04:55:17,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:55:40] 2025-11-23 04:55:17,357 | INFO     | did not find any defunct processes belonging to 4293
[2025-11-22 23:55:40] 2025-11-23 04:55:17,360 | INFO     | did not find any defunct processes belonging to 4293
[2025-11-22 23:55:40] 2025-11-23 04:55:17,362 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:55:40] 2025-11-23 04:55:17,362 | INFO     | ready for new job
[2025-11-22 23:55:40] 2025-11-23 04:55:17,363 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:55:40] 2025-11-23 04:55:17,365 | INFO     | ***************************************
[2025-11-22 23:55:40] 2025-11-23 04:55:17,365 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:55:40] 2025-11-23 04:55:17,365 | INFO     | ***************************************
[2025-11-22 23:55:40] 2025-11-23 04:55:17,365 | INFO     | 
[2025-11-22 23:55:40] 2025-11-23 04:55:17,366 | INFO     | architecture information:
[2025-11-22 23:55:40] 2025-11-23 04:55:17,367 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:55:40] 2025-11-23 04:55:17,383 | INFO     | cat /etc/os-release:
[2025-11-22 23:55:40] NAME="CentOS Linux"
[2025-11-22 23:55:40] VERSION="7 (Core)"
[2025-11-22 23:55:40] ID="centos"
[2025-11-22 23:55:40] ID_LIKE="rhel fedora"
[2025-11-22 23:55:40] VERSION_ID="7"
[2025-11-22 23:55:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:55:40] ANSI_COLOR="0;31"
[2025-11-22 23:55:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:55:40] HOME_URL="https://www.centos.org/"
[2025-11-22 23:55:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:55:40] 
[2025-11-22 23:55:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:55:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:55:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:55:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:55:40] 
[2025-11-22 23:55:40] 2025-11-23 04:55:17,383 | INFO     | ***************************************
[2025-11-22 23:55:40] 2025-11-23 04:55:17,886 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 23:55:40] 2025-11-23 04:55:17,902 | INFO     | sufficient remaining disk space (28244443136 B)
[2025-11-22 23:55:40] 2025-11-23 04:55:17,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:55:40] 2025-11-23 04:55:17,902 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:55:40] 2025-11-23 04:55:17,903 | INFO     | update_server=False
[2025-11-22 23:55:40] 2025-11-23 04:55:17,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:55:40] 2025-11-23 04:55:17,903 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-22 23:55:40] 2025-11-23 04:55:17,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:55:40] 2025-11-23 04:55:17,904 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:55:40] 2025-11-23 04:55:17,904 | INFO     | aborting loop
[2025-11-22 23:55:40] 2025-11-23 04:55:17,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:55:40] 2025-11-23 04:55:17,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:55:40] 2025-11-23 04:55:18,057 | INFO     | all data control threads have been joined
[2025-11-22 23:55:40] 2025-11-23 04:55:18,403 | INFO     | all payload control threads have been joined
[2025-11-22 23:55:40] 2025-11-23 04:55:18,429 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:55:40] 2025-11-23 04:55:18,777 | INFO     | all job control threads have been joined
[2025-11-22 23:55:40] 2025-11-23 04:55:18,908 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:18,909 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:18,926 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:19,004 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:19,063 | INFO     | [data] control thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:19,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:55:40] 2025-11-23 04:55:19,376 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:19,409 | INFO     | [payload] control thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:19,445 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:19,788 | INFO     | [job] control thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:19,858 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:19,871 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:19,962 | INFO     | [job] validate thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:20,101 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:20,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:55:40] 2025-11-23 04:55:21,131 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:21,763 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:22,435 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:55:40] 2025-11-23 04:55:34,252 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:55:40] 2025-11-23 04:55:34,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832088885056)>', '<ExcThread(monitor, started 139830897923840)>']
[2025-11-22 23:55:40] 2025-11-23 04:55:34,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:55:40] 2025-11-23 04:55:34,986 | INFO     | [monitor] control thread has ended
[2025-11-22 23:55:40] 2025-11-23 04:55:39,948 | INFO     | all workflow threads have been joined
[2025-11-22 23:55:40] 2025-11-23 04:55:39,949 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:55:40] 2025-11-23 04:55:39,949 | INFO     | traces error code: 0
[2025-11-22 23:55:40] 2025-11-23 04:55:39,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:55:40] 2025-11-23 04:55:40,047 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:55:40] 2025-11-23 04:55:40,050 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:55:40] 2025-11-23 04:55:40,053 [wrapper] pilotpid: 30138
[2025-11-22 23:55:40] 2025-11-23 04:55:40,057 [wrapper] Pilot exit status: 0
[2025-11-22 23:55:40] 2025-11-23 04:55:40,071 [wrapper] pandaids: 6895332000
[2025-11-22 23:55:40] 2025-11-23 04:55:40,111 [wrapper] cleanup supervisor_pilot 17295 30139
[2025-11-22 23:55:40] 2025-11-23 04:55:40,115 [wrapper] Test setup, not cleaning
[2025-11-22 23:55:40] 2025-11-23 04:55:40,119 [wrapper] apfmon messages muted
[2025-11-22 23:55:40] 2025-11-23 04:55:40,123 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:55:40] 2025-11-23 04:55:40,126 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:55:40]  *** Error codes and diagnostics ***
[2025-11-22 23:55:40]     "exeErrorCode": 0,
[2025-11-22 23:55:40]     "exeErrorDiag": "",
[2025-11-22 23:55:40]     "pilotErrorCode": 0,
[2025-11-22 23:55:40]     "pilotErrorDiag": "",
[2025-11-22 23:55:40]  *** Listing of results directory ***
[2025-11-22 23:55:40] total 1316868
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 18:51 pilot3.tar.gz
[2025-11-22 23:55:40] -rwx------ 1 boincer umatlas     36292 Nov 21 19:07 runpilot2-wrapper.sh
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 19:07 queuedata.json
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas       100 Nov 22 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:55:40] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 16:41 run_atlas
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas       105 Nov 22 16:41 job.xml
[2025-11-22 23:55:40] -rw-r--r-- 2 boincer umatlas 410505383 Nov 22 16:41 EVNT.47483658._000186.pool.root.1
[2025-11-22 23:55:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 16:41 start_atlas.sh
[2025-11-22 23:55:40] drwxrwx--x 2 boincer umatlas      4096 Nov 22 16:41 shared
[2025-11-22 23:55:40] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 16:41 input.tar.gz
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas         0 Nov 22 16:41 boinc_lockfile
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 16:41 pandaJob.out
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas        57 Nov 22 16:41 setup.sh.local
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas    989768 Nov 22 16:41 agis_schedconf.cvmfs.json
[2025-11-22 23:55:40] drwx------ 5 boincer umatlas      4096 Nov 22 16:41 pilot3
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas       532 Nov 22 23:46 boinc_task_state.xml
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas      5956 Nov 22 23:49 init_data.xml
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas 922427445 Nov 22 23:54 HITS.47556137._001854.pool.root.1
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas      1063 Nov 22 23:54 memory_monitor_summary.json
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas   1526164 Nov 22 23:55 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas   2174964 Nov 22 23:55 log.47556137._001854.job.log.tgz.1
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas        95 Nov 22 23:55 pilot_heartbeat.json
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas      8679 Nov 22 23:55 heartbeat.json
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 23:55 boinc_mmap_file
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas        29 Nov 22 23:55 wrapper_checkpoint.txt
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas      4552 Nov 22 23:55 pilotlog.txt
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas   3631653 Nov 22 23:55 log.47556137._001854.job.log.1
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas       353 Nov 22 23:55 output.list
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas       620 Nov 22 23:55 runtime_log
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas   5826560 Nov 22 23:55 result.tar.gz
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 23:55 runtime_log.err
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas       670 Nov 22 23:55 9WGMDmNLqg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmboJKDm5C68Bn.diag
[2025-11-22 23:55:40] -rw-r--r-- 1 boincer umatlas     21323 Nov 22 23:55 stderr.txt
[2025-11-22 23:55:40] HITS file was successfully produced:
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas 922427445 Nov 22 23:54 shared/HITS.pool.root.1
[2025-11-22 23:55:40]  *** Contents of shared directory: ***
[2025-11-22 23:55:40] total 1307992
[2025-11-22 23:55:40] -rw-r--r-- 2 boincer umatlas 410505383 Nov 22 16:41 ATLAS.root_0
[2025-11-22 23:55:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 16:41 start_atlas.sh
[2025-11-22 23:55:40] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 16:41 input.tar.gz
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas 922427445 Nov 22 23:54 HITS.pool.root.1
[2025-11-22 23:55:40] -rw------- 1 boincer umatlas   5826560 Nov 22 23:55 result.tar.gz
23:55:41 (26460): run_atlas exited; CPU time 291127.122761
23:55:41 (26460): called boinc_finish(0)

</stderr_txt>
]]>

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