Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:41:29 (15812): wrapper (7.7.26015): starting
23:41:29 (15812): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 23:41:29] Arguments: --nthreads 8
[2025-11-24 23:41:29] Threads: 8
[2025-11-24 23:41:29] Checking for CVMFS
[2025-11-24 23:41:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:41:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:41:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:41:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:41:32] 2.11.2.0 19872 282950 141628 153261 0 60 23564001 25165825 1027 130560 25 120652635 99.873 77695232 2611 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 23:41:32] CVMFS is ok
[2025-11-24 23:41:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:41:32] Checking for apptainer binary...
[2025-11-24 23:41:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:41:32] Running /usr/bin/apptainer --version
[2025-11-24 23:41:32] apptainer version 1.3.2-1.el7
[2025-11-24 23:41:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:41:46] cg-vwn350.simple-grid.lan
[2025-11-24 23:41:46] apptainer works
[2025-11-24 23:41:46] Set ATHENA_PROC_NUMBER=8
[2025-11-24 23:41:46] Set ATHENA_CORE_NUMBER=8
[2025-11-24 23:41:46] Starting ATLAS job with PandaID=6895324207
[2025-11-24 23:41:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:17:43]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:17:43] 2025-11-25 23:16:48,352 | INFO     | monitor loop #5936: job 0:6895324207 is in state 'finished'
[2025-11-26 00:17:43] 2025-11-25 23:16:48,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:17:43] 2025-11-25 23:16:49,313 | INFO     | time since job start (88249s) is within the limit (172800.0s)
[2025-11-26 00:17:43] 2025-11-25 23:16:50,856 | INFO     | monitor loop #5937: job 0:6895324207 is in state 'finished'
[2025-11-26 00:17:43] 2025-11-25 23:16:50,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:17:43] 2025-11-25 23:16:51,324 | INFO     | time since job start (88251s) is within the limit (172800.0s)
[2025-11-26 00:17:43] 2025-11-25 23:16:52,496 | INFO     | PID=19546 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:17:43] 2025-11-25 23:16:52,496 | INFO     | .. there are 9 such processes running
[2025-11-26 00:17:43] 2025-11-25 23:16:53,368 | INFO     | monitor loop #5938: job 0:6895324207 is in state 'finished'
[2025-11-26 00:17:43] 2025-11-25 23:16:53,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:17:43] 2025-11-25 23:16:53,497 | INFO     | time since job start (88253s) is within the limit (172800.0s)
[2025-11-26 00:17:43] 2025-11-25 23:16:54,574 [wrapper] supervise_pilot (15 min periods counter: 99)
[2025-11-26 00:17:43] 2025-11-25 23:16:55,504 | INFO     | time since job start (88255s) is within the limit (172800.0s)
[2025-11-26 00:17:43] 2025-11-25 23:16:55,874 | INFO     | monitor loop #5939: job 0:6895324207 is in state 'finished'
[2025-11-26 00:17:43] 2025-11-25 23:16:55,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:17:43] 2025-11-25 23:16:57,516 | INFO     | time since job start (88257s) is within the limit (172800.0s)
[2025-11-26 00:17:43] 2025-11-25 23:16:57,951 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 00:17:43] 2025-11-25 23:16:57,952 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 00:17:43] 2025-11-25 23:16:57,954 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6895324207/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:17:43] 2025-11-25 23:16:57,955 | INFO     | extracted standard info from prmon json
[2025-11-26 00:17:43] 2025-11-25 23:16:57,955 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:17:43] 2025-11-25 23:16:57,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:17:43] 2025-11-25 23:16:57,998 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:17:43] 2025-11-25 23:16:58,000 | INFO     | sum of square deviations: 918215831977.0057
[2025-11-26 00:17:43] 2025-11-25 23:16:58,087 | INFO     | sum of deviations: 4236798946990.1606
[2025-11-26 00:17:43] 2025-11-25 23:16:58,088 | INFO     | mean x: 1764068687.6789694
[2025-11-26 00:17:43] 2025-11-25 23:16:58,088 | INFO     | mean y: 2821194.7834261837
[2025-11-26 00:17:43] 2025-11-25 23:16:58,088 | INFO     | intersect: -8136882018.876409
[2025-11-26 00:17:43] 2025-11-25 23:16:58,090 | INFO     | chi2: 30.43046764895935
[2025-11-26 00:17:43] 2025-11-25 23:16:58,092 | INFO     | sum of square deviations: 908658383080.0309
[2025-11-26 00:17:43] 2025-11-25 23:16:58,171 | INFO     | sum of deviations: 4694352228675.028
[2025-11-26 00:17:43] 2025-11-25 23:16:58,171 | INFO     | mean x: 1764068535.1830888
[2025-11-26 00:17:43] 2025-11-25 23:16:58,171 | INFO     | mean y: 2828494.183088749
[2025-11-26 00:17:43] 2025-11-25 23:16:58,172 | INFO     | intersect: -9110782532.66071
[2025-11-26 00:17:43] 2025-11-25 23:16:58,174 | INFO     | chi2: 27.40441487985709
[2025-11-26 00:17:43] 2025-11-25 23:16:58,174 | INFO     | current chi2=27.40441487985709 (change=9.944154667651796 %)
[2025-11-26 00:17:43] 2025-11-25 23:16:58,174 | INFO     | right removable region: 1430
[2025-11-26 00:17:43] 2025-11-25 23:16:58,176 | INFO     | sum of square deviations: 908657350350.0293
[2025-11-26 00:17:43] 2025-11-25 23:16:58,254 | INFO     | sum of deviations: 3627098481630.7373
[2025-11-26 00:17:43] 2025-11-25 23:16:58,254 | INFO     | mean x: 1764068840.1830888
[2025-11-26 00:17:43] 2025-11-25 23:16:58,254 | INFO     | mean y: 2830922.1956673656
[2025-11-26 00:17:43] 2025-11-25 23:16:58,255 | INFO     | intersect: -7038823898.794215
[2025-11-26 00:17:43] 2025-11-25 23:16:58,256 | INFO     | chi2: 25.39558967259693
[2025-11-26 00:17:43] 2025-11-25 23:16:58,257 | INFO     | current chi2=25.39558967259693 (change=16.545516271533874 %)
[2025-11-26 00:17:43] 2025-11-25 23:16:58,257 | INFO     | left removable region: 10
[2025-11-26 00:17:43] 2025-11-25 23:16:58,259 | INFO     | sum of square deviations: 887863891642.5143
[2025-11-26 00:17:43] 2025-11-25 23:16:58,376 | INFO     | sum of deviations: 3624999830591.9487
[2025-11-26 00:17:43] 2025-11-25 23:16:58,377 | INFO     | mean x: 1764068809.6922536
[2025-11-26 00:17:43] 2025-11-25 23:16:58,377 | INFO     | mean y: 2848874.4232394365
[2025-11-26 00:17:43] 2025-11-25 23:16:58,377 | INFO     | intersect: -7199549146.8060255
[2025-11-26 00:17:43] 2025-11-25 23:16:58,379 | INFO     | chi2: 17.556872648067856
[2025-11-26 00:17:43] 2025-11-25 23:16:58,379 | INFO     | current memory leak: 4.08 B/s (using 1420 data points, chi2=17.56)
[2025-11-26 00:17:43] 2025-11-25 23:16:58,382 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-26 00:17:43] 2025-11-25 23:16:58,382 | INFO     | ..............................
[2025-11-26 00:17:43] 2025-11-25 23:16:58,382 | INFO     | . Timing measurements:
[2025-11-26 00:17:43] 2025-11-25 23:16:58,382 | INFO     | . get job = 0 s
[2025-11-26 00:17:43] 2025-11-25 23:16:58,382 | INFO     | . initial setup = 7 s
[2025-11-26 00:17:43] 2025-11-25 23:16:58,382 | INFO     | . payload setup = 182 s
[2025-11-26 00:17:43] 2025-11-25 23:16:58,382 | INFO     | . stage-in = 0 s
[2025-11-26 00:17:43] 2025-11-25 23:16:58,382 | INFO     | . payload execution = 87739 s
[2025-11-26 00:17:43] 2025-11-25 23:16:58,383 | INFO     | . stage-out = 10 s
[2025-11-26 00:17:43] 2025-11-25 23:16:58,383 | INFO     | . log creation = 7 s
[2025-11-26 00:17:43] 2025-11-25 23:16:58,383 | INFO     | ..............................
[2025-11-26 00:17:43] 2025-11-25 23:16:58,563 | INFO     | 
[2025-11-26 00:17:43] 2025-11-25 23:16:58,564 | INFO     | job summary report
[2025-11-26 00:17:43] 2025-11-25 23:16:58,564 | INFO     | --------------------------------------------------
[2025-11-26 00:17:43] 2025-11-25 23:16:58,564 | INFO     | PanDA job id: 6895324207
[2025-11-26 00:17:43] 2025-11-25 23:16:58,564 | INFO     | task id: 47556137
[2025-11-26 00:17:43] 2025-11-25 23:16:58,564 | INFO     | errors: (none)
[2025-11-26 00:17:43] 2025-11-25 23:16:58,564 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:17:43] 2025-11-25 23:16:58,564 | INFO     | pilot state: finished 
[2025-11-26 00:17:43] 2025-11-25 23:16:58,564 | INFO     | transexitcode: 0
[2025-11-26 00:17:43] 2025-11-25 23:16:58,564 | INFO     | exeerrorcode: 0
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | exeerrordiag: 
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | exitcode: 0
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | exitmsg: OK
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | cpuconsumptiontime: 337306 s
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | nevents: 1000
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | neventsw: 0
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | pid: 26016
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | pgrp: 26016
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | corecount: 8
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | event service: False
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | sizes: {0: 2284080, 1: 2284335, 2: 2284335, 12: 2284363, 23: 2284391, 34: 2284419, 44: 2284575, 55: 2284603, 66: 2284631, 77: 2284659, 87: 2284715, 98: 2285023, 10
[2025-11-26 00:17:43] 2025-11-25 23:16:58,565 | INFO     | --------------------------------------------------
[2025-11-26 00:17:43] 2025-11-25 23:16:58,566 | INFO     | 
[2025-11-26 00:17:43] 2025-11-25 23:16:58,566 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-11-26 00:17:43] 2025-11-25 23:16:59,159 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,160 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,160 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,161 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:17:43] 2025-11-25 23:16:59,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,162 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:17:43] 2025-11-25 23:16:59,162 | INFO     | job 6895324207 has completed (purged errors)
[2025-11-26 00:17:43] 2025-11-25 23:16:59,162 | INFO     | overall cleanup function is called
[2025-11-26 00:17:43] 2025-11-25 23:17:00,182 | INFO     | --- collectZombieJob: --- 10, [26016]
[2025-11-26 00:17:43] 2025-11-25 23:17:00,183 | INFO     | zombie collector waiting for pid 26016
[2025-11-26 00:17:43] 2025-11-25 23:17:00,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:17:43] 2025-11-25 23:17:00,183 | INFO     | collected zombie processes
[2025-11-26 00:17:43] 2025-11-25 23:17:00,183 | INFO     | will attempt to kill all subprocesses of pid=26016
[2025-11-26 00:17:43] 2025-11-25 23:17:00,282 | INFO     | process IDs to be killed: [26016] (in reverse order)
[2025-11-26 00:17:43] 2025-11-25 23:17:01,063 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:17:43] 2025-11-25 23:17:01,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:17:43] 2025-11-25 23:17:01,067 | INFO     | did not find any defunct processes belonging to 26016
[2025-11-26 00:17:43] 2025-11-25 23:17:01,070 | INFO     | did not find any defunct processes belonging to 26016
[2025-11-26 00:17:43] 2025-11-25 23:17:01,081 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:17:43] 2025-11-25 23:17:01,081 | INFO     | ready for new job
[2025-11-26 00:17:43] 2025-11-25 23:17:01,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:17:43] 2025-11-25 23:17:01,088 | INFO     | ***************************************
[2025-11-26 00:17:43] 2025-11-25 23:17:01,088 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:17:43] 2025-11-25 23:17:01,088 | INFO     | ***************************************
[2025-11-26 00:17:43] 2025-11-25 23:17:01,088 | INFO     | 
[2025-11-26 00:17:43] 2025-11-25 23:17:01,089 | INFO     | pilot is running in a VM
[2025-11-26 00:17:43] 2025-11-25 23:17:01,089 | INFO     | architecture information:
[2025-11-26 00:17:43] 2025-11-25 23:17:01,092 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:17:43] 2025-11-25 23:17:01,202 | INFO     | cat /etc/os-release:
[2025-11-26 00:17:43] NAME="CentOS Linux"
[2025-11-26 00:17:43] VERSION="7 (Core)"
[2025-11-26 00:17:43] ID="centos"
[2025-11-26 00:17:43] ID_LIKE="rhel fedora"
[2025-11-26 00:17:43] VERSION_ID="7"
[2025-11-26 00:17:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:17:43] ANSI_COLOR="0;31"
[2025-11-26 00:17:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:17:43] HOME_URL="https://www.centos.org/"
[2025-11-26 00:17:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:17:43] 
[2025-11-26 00:17:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:17:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:17:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:17:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:17:43] 
[2025-11-26 00:17:43] 2025-11-25 23:17:01,202 | INFO     | ***************************************
[2025-11-26 00:17:43] 2025-11-25 23:17:01,706 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-11-26 00:17:43] 2025-11-25 23:17:01,790 | INFO     | sufficient remaining disk space (494682505216 B)
[2025-11-26 00:17:43] 2025-11-25 23:17:01,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:17:43] 2025-11-25 23:17:01,791 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:17:43] 2025-11-25 23:17:01,791 | INFO     | update_server=False
[2025-11-26 00:17:43] 2025-11-25 23:17:01,791 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:17:43] 2025-11-25 23:17:01,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:17:43] 2025-11-25 23:17:01,957 | INFO     | aborting loop
[2025-11-26 00:17:43] 2025-11-25 23:17:02,510 | INFO     | all payload control threads have been joined
[2025-11-26 00:17:43] 2025-11-25 23:17:02,682 | INFO     | all data control threads have been joined
[2025-11-26 00:17:43] 2025-11-25 23:17:02,802 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:02,830 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:02,937 | INFO     | all job control threads have been joined
[2025-11-26 00:17:43] 2025-11-25 23:17:02,963 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:03,034 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:03,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:17:43] 2025-11-25 23:17:03,234 | INFO     | [job] validate thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:03,292 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:03,301 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:17:43] 2025-11-25 23:17:03,517 | INFO     | [payload] control thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:03,517 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:03,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:17:43] 2025-11-25 23:17:03,666 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:03,687 | INFO     | [data] control thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:03,944 | INFO     | [job] control thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:04,112 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:04,273 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:04,592 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:05,065 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:07,310 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:17:43] 2025-11-25 23:17:30,721 | INFO     | PID=19546 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:17:43] 2025-11-25 23:17:30,721 | INFO     | .. there are 9 such processes running
[2025-11-26 00:17:43] 2025-11-25 23:17:30,727 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:17:43] 2025-11-25 23:17:30,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:17:43] 2025-11-25 23:17:30,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:17:43] 2025-11-25 23:17:33,327 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:17:43] 2025-11-25 23:17:33,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140529772353344)>', '<ExcThread(monitor, started 140529467627264)>']
[2025-11-26 00:17:43] 2025-11-25 23:17:34,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:17:43] 2025-11-25 23:17:34,751 | INFO     | [monitor] control thread has ended
[2025-11-26 00:17:43] 2025-11-25 23:17:39,008 | INFO     | all workflow threads have been joined
[2025-11-26 00:17:43] 2025-11-25 23:17:39,008 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:17:43] 2025-11-25 23:17:39,008 | INFO     | traces error code: 0
[2025-11-26 00:17:43] 2025-11-25 23:17:39,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:17:43] 2025-11-25 23:17:39,449 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:17:43] 2025-11-25 23:17:39,550 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:17:43] 2025-11-25 23:17:39,628 [wrapper] pilotpid: 19546
[2025-11-26 00:17:43] 2025-11-25 23:17:39,698 [wrapper] Pilot exit status: 0
[2025-11-26 00:17:43] 2025-11-25 23:17:40,049 [wrapper] pandaids: 6895324207
[2025-11-26 00:17:43] 2025-11-25 23:17:40,293 [wrapper] cleanup supervisor_pilot 24497 19547
[2025-11-26 00:17:43] 2025-11-25 23:17:40,297 [wrapper] Test setup, not cleaning
[2025-11-26 00:17:43] 2025-11-25 23:17:40,309 [wrapper] apfmon messages muted
[2025-11-26 00:17:43] 2025-11-25 23:17:40,439 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:17:43] 2025-11-25 23:17:40,605 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:17:43]  *** Error codes and diagnostics ***
[2025-11-26 00:17:43]     "exeErrorCode": 0,
[2025-11-26 00:17:43]     "exeErrorDiag": "",
[2025-11-26 00:17:43]     "pilotErrorCode": 0,
[2025-11-26 00:17:43]     "pilotErrorDiag": "",
[2025-11-26 00:17:43]  *** Listing of results directory ***
[2025-11-26 00:17:43] total 1325156
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc    576529 Nov 21 14:51 pilot3.tar.gz
[2025-11-26 00:17:43] -rwx------. 1 boinc boinc     36292 Nov 21 15:15 runpilot2-wrapper.sh
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc      5112 Nov 21 15:15 queuedata.json
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc       100 Nov 24 23:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:17:43] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 23:41 run_atlas
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc       105 Nov 24 23:41 job.xml
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc      6393 Nov 24 23:41 init_data.xml
[2025-11-26 00:17:43] -rw-r--r--. 2 boinc boinc 410047865 Nov 24 23:41 EVNT.47483658._000018.pool.root.1
[2025-11-26 00:17:43] -rw-r--r--. 2 boinc boinc     15847 Nov 24 23:41 start_atlas.sh
[2025-11-26 00:17:43] drwxrwx--x. 2 boinc boinc        68 Nov 24 23:41 shared
[2025-11-26 00:17:43] -rw-r--r--. 2 boinc boinc    590095 Nov 24 23:41 input.tar.gz
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc         0 Nov 24 23:41 boinc_lockfile
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc      2784 Nov 24 23:41 pandaJob.out
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc    991801 Nov 24 23:45 agis_schedconf.cvmfs.json
[2025-11-26 00:17:43] drwx------. 5 boinc boinc      4096 Nov 24 23:46 pilot3
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc       533 Nov 25 23:52 boinc_task_state.xml
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc 914305241 Nov 26 00:13 HITS.47556137._000174.pool.root.1
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc      1031 Nov 26 00:14 memory_monitor_summary.json
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc   1516240 Nov 26 00:14 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc   2532607 Nov 26 00:15 log.47556137._000174.job.log.tgz.1
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc      8625 Nov 26 00:16 heartbeat.json
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc        95 Nov 26 00:17 pilot_heartbeat.json
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc      4885 Nov 26 00:17 pilotlog.txt
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc  11814637 Nov 26 00:17 log.47556137._000174.job.log.1
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc       353 Nov 26 00:17 output.list
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc       620 Nov 26 00:17 runtime_log
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc      8192 Nov 26 00:17 boinc_mmap_file
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc  14366720 Nov 26 00:17 result.tar.gz
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc        29 Nov 26 00:17 wrapper_checkpoint.txt
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc      8833 Nov 26 00:17 runtime_log.err
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc       662 Nov 26 00:17 NwRLDmL6gg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmteHKDmqfMTQm.diag
[2025-11-26 00:17:43] -rw-r--r--. 1 boinc boinc     21489 Nov 26 00:17 stderr.txt
[2025-11-26 00:17:43] HITS file was successfully produced:
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc 914305241 Nov 26 00:13 shared/HITS.pool.root.1
[2025-11-26 00:17:43]  *** Contents of shared directory: ***
[2025-11-26 00:17:43] total 1307948
[2025-11-26 00:17:43] -rw-r--r--. 2 boinc boinc 410047865 Nov 24 23:41 ATLAS.root_0
[2025-11-26 00:17:43] -rw-r--r--. 2 boinc boinc     15847 Nov 24 23:41 start_atlas.sh
[2025-11-26 00:17:43] -rw-r--r--. 2 boinc boinc    590095 Nov 24 23:41 input.tar.gz
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc 914305241 Nov 26 00:13 HITS.pool.root.1
[2025-11-26 00:17:43] -rw-------. 1 boinc boinc  14366720 Nov 26 00:17 result.tar.gz
00:17:45 (15812): run_atlas exited; CPU time 337778.780221
00:17:45 (15812): called boinc_finish(0)

</stderr_txt>
]]>

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