Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:17:34 (1257): wrapper (7.7.26015): starting
16:17:34 (1257): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 16:17:34] Arguments: --nthreads 8
[2025-11-22 16:17:34] Threads: 8
[2025-11-22 16:17:34] Checking for CVMFS
[2025-11-22 16:17:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 16:17:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 16:17:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 16:17:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 16:17:34] 2.11.2.0 21766 112468 142932 153185 3 72 15992426 18432000 1865 130560 0 81183494 99.973 4700699 26832 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 16:17:34] CVMFS is ok
[2025-11-22 16:17:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 16:17:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 16:17:34] Further information can be found at the LHC@home message board.
[2025-11-22 16:17:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 16:17:34] Checking for apptainer binary...
[2025-11-22 16:17:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 16:17:34] Running /usr/bin/apptainer --version
[2025-11-22 16:17:34] apptainer version 1.3.2-1.el7
[2025-11-22 16:17:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 16:17:35] c-206-18.aglt2.org
[2025-11-22 16:17:35] apptainer works
[2025-11-22 16:17:35] Set ATHENA_PROC_NUMBER=8
[2025-11-22 16:17:35] Set ATHENA_CORE_NUMBER=8
[2025-11-22 16:17:35] Starting ATLAS job with PandaID=6895323633
[2025-11-22 16:17:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 12:04:08]  *** The last 200 lines of the pilot log: ***
[2025-11-23 12:04:08] 2025-11-23 17:03:33,985 | INFO     | monitor loop #5091: job 0:6895323633 is in state 'finished'
[2025-11-23 12:04:08] 2025-11-23 17:03:33,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 12:04:08] 2025-11-23 17:03:35,036 | INFO     | time since job start (71149s) is within the limit (172800.0s)
[2025-11-23 12:04:08] 2025-11-23 17:03:35,631 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 12:04:08] 2025-11-23 17:03:35,639 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2455.75
[2025-11-23 12:04:08] 2025-11-23 17:03:35,645 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895323633/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 12:04:08] 2025-11-23 17:03:35,646 | INFO     | extracted standard info from prmon json
[2025-11-23 12:04:08] 2025-11-23 17:03:35,646 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 12:04:08] 2025-11-23 17:03:35,646 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 12:04:08] 2025-11-23 17:03:35,662 | INFO     | fitting pss+swap vs Time
[2025-11-23 12:04:08] 2025-11-23 17:03:35,664 | INFO     | sum of square deviations: 491555450022.5051
[2025-11-23 12:04:08] 2025-11-23 17:03:35,690 | INFO     | sum of deviations: 1987111456806.5588
[2025-11-23 12:04:08] 2025-11-23 17:03:35,690 | INFO     | mean x: 1763881824.14494
[2025-11-23 12:04:08] 2025-11-23 17:03:35,690 | INFO     | mean y: 2867258.653516295
[2025-11-23 12:04:08] 2025-11-23 17:03:35,690 | INFO     | intersect: -7127619812.643911
[2025-11-23 12:04:08] 2025-11-23 17:03:35,691 | INFO     | chi2: 5.774045819950833
[2025-11-23 12:04:08] 2025-11-23 17:03:35,692 | INFO     | sum of square deviations: 485259124112.91547
[2025-11-23 12:04:08] 2025-11-23 17:03:35,716 | INFO     | sum of deviations: 2349420049558.7583
[2025-11-23 12:04:08] 2025-11-23 17:03:35,717 | INFO     | mean x: 1763881671.6477175
[2025-11-23 12:04:08] 2025-11-23 17:03:35,717 | INFO     | mean y: 2876031.7769164513
[2025-11-23 12:04:08] 2025-11-23 17:03:35,717 | INFO     | intersect: -8537095209.349239
[2025-11-23 12:04:08] 2025-11-23 17:03:35,718 | INFO     | chi2: 2.9645233996783125
[2025-11-23 12:04:08] 2025-11-23 17:03:35,718 | INFO     | current chi2=2.9645233996783125 (change=48.657778408423574 %)
[2025-11-23 12:04:08] 2025-11-23 17:03:35,719 | INFO     | sum of square deviations: 479016799215.8097
[2025-11-23 12:04:08] 2025-11-23 17:03:35,743 | INFO     | sum of deviations: 2506376478103.953
[2025-11-23 12:04:08] 2025-11-23 17:03:35,743 | INFO     | mean x: 1763881519.1505191
[2025-11-23 12:04:08] 2025-11-23 17:03:35,743 | INFO     | mean y: 2879863.488754325
[2025-11-23 12:04:08] 2025-11-23 17:03:35,743 | INFO     | intersect: -9226339564.72043
[2025-11-23 12:04:08] 2025-11-23 17:03:35,744 | INFO     | chi2: 2.319212922706834
[2025-11-23 12:04:08] 2025-11-23 17:03:35,744 | INFO     | current chi2=2.319212922706834 (change=21.76776466131125 %)
[2025-11-23 12:04:08] 2025-11-23 17:03:35,744 | INFO     | right removable region: 1155
[2025-11-23 12:04:08] 2025-11-23 17:03:35,745 | INFO     | sum of square deviations: 485258665392.91547
[2025-11-23 12:04:08] 2025-11-23 17:03:35,769 | INFO     | sum of deviations: 1687650798410.1714
[2025-11-23 12:04:08] 2025-11-23 17:03:35,769 | INFO     | mean x: 1763881976.6477175
[2025-11-23 12:04:08] 2025-11-23 17:03:35,769 | INFO     | mean y: 2874503.2351421188
[2025-11-23 12:04:08] 2025-11-23 17:03:35,769 | INFO     | intersect: -6131620434.182398
[2025-11-23 12:04:08] 2025-11-23 17:03:35,770 | INFO     | chi2: 3.766049142414625
[2025-11-23 12:04:08] 2025-11-23 17:03:35,771 | INFO     | current chi2=3.766049142414625 (change=34.776251178992304 %)
[2025-11-23 12:04:08] 2025-11-23 17:03:35,772 | INFO     | sum of square deviations: 479016023662.40845
[2025-11-23 12:04:08] 2025-11-23 17:03:35,797 | INFO     | sum of deviations: 1610711719249.2876
[2025-11-23 12:04:08] 2025-11-23 17:03:35,797 | INFO     | mean x: 1763882129.148789
[2025-11-23 12:04:08] 2025-11-23 17:03:35,798 | INFO     | mean y: 2876382.4576124568
[2025-11-23 12:04:08] 2025-11-23 17:03:35,798 | INFO     | intersect: -5928252173.685718
[2025-11-23 12:04:08] 2025-11-23 17:03:35,799 | INFO     | chi2: 3.7074269328628926
[2025-11-23 12:04:08] 2025-11-23 17:03:35,800 | INFO     | current chi2=3.7074269328628926 (change=1.5565970420169983 %)
[2025-11-23 12:04:08] 2025-11-23 17:03:35,800 | INFO     | left removable region: 20
[2025-11-23 12:04:08] 2025-11-23 17:03:35,801 | INFO     | sum of square deviations: 453382203190.3034
[2025-11-23 12:04:08] 2025-11-23 17:03:35,846 | INFO     | sum of deviations: 2044768260646.1055
[2025-11-23 12:04:08] 2025-11-23 17:03:35,846 | INFO     | mean x: 1763882098.6555066
[2025-11-23 12:04:08] 2025-11-23 17:03:35,846 | INFO     | mean y: 2892045.639647577
[2025-11-23 12:04:08] 2025-11-23 17:03:35,846 | INFO     | intersect: -7952272725.878143
[2025-11-23 12:04:08] 2025-11-23 17:03:35,848 | INFO     | chi2: 0.1802392242887133
[2025-11-23 12:04:08] 2025-11-23 17:03:35,848 | INFO     | current memory leak: 4.51 B/s (using 1135 data points, chi2=0.18)
[2025-11-23 12:04:08] 2025-11-23 17:03:35,849 | INFO     | could have reported an average CPU frequency of 2629 MHz (42 samples)
[2025-11-23 12:04:08] 2025-11-23 17:03:35,849 | INFO     | ..............................
[2025-11-23 12:04:08] 2025-11-23 17:03:35,849 | INFO     | . Timing measurements:
[2025-11-23 12:04:08] 2025-11-23 17:03:35,850 | INFO     | . get job = 0 s
[2025-11-23 12:04:08] 2025-11-23 17:03:35,850 | INFO     | . initial setup = 2 s
[2025-11-23 12:04:08] 2025-11-23 17:03:35,850 | INFO     | . payload setup = 5 s
[2025-11-23 12:04:08] 2025-11-23 17:03:35,850 | INFO     | . stage-in = 0 s
[2025-11-23 12:04:08] 2025-11-23 17:03:35,850 | INFO     | . payload execution = 71115 s
[2025-11-23 12:04:08] 2025-11-23 17:03:35,850 | INFO     | . stage-out = 4 s
[2025-11-23 12:04:08] 2025-11-23 17:03:35,850 | INFO     | . log creation = 0 s
[2025-11-23 12:04:08] 2025-11-23 17:03:35,851 | INFO     | ..............................
[2025-11-23 12:04:08] 2025-11-23 17:03:35,982 | INFO     | 
[2025-11-23 12:04:08] 2025-11-23 17:03:35,983 | INFO     | job summary report
[2025-11-23 12:04:08] 2025-11-23 17:03:35,983 | INFO     | --------------------------------------------------
[2025-11-23 12:04:08] 2025-11-23 17:03:35,983 | INFO     | PanDA job id: 6895323633
[2025-11-23 12:04:08] 2025-11-23 17:03:35,983 | INFO     | task id: 47556137
[2025-11-23 12:04:08] 2025-11-23 17:03:35,983 | INFO     | errors: (none)
[2025-11-23 12:04:08] 2025-11-23 17:03:35,983 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 12:04:08] 2025-11-23 17:03:35,984 | INFO     | pilot state: finished 
[2025-11-23 12:04:08] 2025-11-23 17:03:35,984 | INFO     | transexitcode: 0
[2025-11-23 12:04:08] 2025-11-23 17:03:35,984 | INFO     | exeerrorcode: 0
[2025-11-23 12:04:08] 2025-11-23 17:03:35,984 | INFO     | exeerrordiag: 
[2025-11-23 12:04:08] 2025-11-23 17:03:35,984 | INFO     | exitcode: 0
[2025-11-23 12:04:08] 2025-11-23 17:03:35,984 | INFO     | exitmsg: OK
[2025-11-23 12:04:08] 2025-11-23 17:03:35,985 | INFO     | cpuconsumptiontime: 547004 s
[2025-11-23 12:04:08] 2025-11-23 17:03:35,985 | INFO     | nevents: 1000
[2025-11-23 12:04:08] 2025-11-23 17:03:35,985 | INFO     | neventsw: 0
[2025-11-23 12:04:08] 2025-11-23 17:03:35,985 | INFO     | pid: 11602
[2025-11-23 12:04:08] 2025-11-23 17:03:35,985 | INFO     | pgrp: 11602
[2025-11-23 12:04:08] 2025-11-23 17:03:35,986 | INFO     | corecount: 8
[2025-11-23 12:04:08] 2025-11-23 17:03:35,986 | INFO     | event service: False
[2025-11-23 12:04:08] 2025-11-23 17:03:35,986 | INFO     | sizes: {0: 2298795, 4: 2299057, 11: 2299085, 71124: 2356045, 71129: 2365039, 71131: 2365095, 71135: 2365469}
[2025-11-23 12:04:08] 2025-11-23 17:03:35,986 | INFO     | --------------------------------------------------
[2025-11-23 12:04:08] 2025-11-23 17:03:35,986 | INFO     | 
[2025-11-23 12:04:08] 2025-11-23 17:03:35,986 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 12:04:08] 2025-11-23 17:03:36,007 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,007 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,007 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,014 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 12:04:08] 2025-11-23 17:03:36,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,014 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 12:04:08] 2025-11-23 17:03:36,015 | INFO     | job 6895323633 has completed (purged errors)
[2025-11-23 12:04:08] 2025-11-23 17:03:36,015 | INFO     | overall cleanup function is called
[2025-11-23 12:04:08] 2025-11-23 17:03:37,031 | INFO     | --- collectZombieJob: --- 10, [11602]
[2025-11-23 12:04:08] 2025-11-23 17:03:37,031 | INFO     | zombie collector waiting for pid 11602
[2025-11-23 12:04:08] 2025-11-23 17:03:37,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 12:04:08] 2025-11-23 17:03:37,032 | INFO     | collected zombie processes
[2025-11-23 12:04:08] 2025-11-23 17:03:37,032 | INFO     | will attempt to kill all subprocesses of pid=11602
[2025-11-23 12:04:08] 2025-11-23 17:03:37,196 | INFO     | process IDs to be killed: [11602] (in reverse order)
[2025-11-23 12:04:08] 2025-11-23 17:03:37,246 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 12:04:08] 2025-11-23 17:03:37,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 12:04:08] 2025-11-23 17:03:37,249 | INFO     | did not find any defunct processes belonging to 11602
[2025-11-23 12:04:08] 2025-11-23 17:03:37,251 | INFO     | did not find any defunct processes belonging to 11602
[2025-11-23 12:04:08] 2025-11-23 17:03:37,253 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 12:04:08] 2025-11-23 17:03:37,253 | INFO     | ready for new job
[2025-11-23 12:04:08] 2025-11-23 17:03:37,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 12:04:08] 2025-11-23 17:03:37,257 | INFO     | ***************************************
[2025-11-23 12:04:08] 2025-11-23 17:03:37,257 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 12:04:08] 2025-11-23 17:03:37,257 | INFO     | ***************************************
[2025-11-23 12:04:08] 2025-11-23 17:03:37,257 | INFO     | 
[2025-11-23 12:04:08] 2025-11-23 17:03:37,258 | INFO     | architecture information:
[2025-11-23 12:04:08] 2025-11-23 17:03:37,258 | INFO     | executing command: cat /etc/os-release
[2025-11-23 12:04:08] 2025-11-23 17:03:37,267 | INFO     | cat /etc/os-release:
[2025-11-23 12:04:08] NAME="CentOS Linux"
[2025-11-23 12:04:08] VERSION="7 (Core)"
[2025-11-23 12:04:08] ID="centos"
[2025-11-23 12:04:08] ID_LIKE="rhel fedora"
[2025-11-23 12:04:08] VERSION_ID="7"
[2025-11-23 12:04:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 12:04:08] ANSI_COLOR="0;31"
[2025-11-23 12:04:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 12:04:08] HOME_URL="https://www.centos.org/"
[2025-11-23 12:04:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 12:04:08] 
[2025-11-23 12:04:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 12:04:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 12:04:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 12:04:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 12:04:08] 
[2025-11-23 12:04:08] 2025-11-23 17:03:37,268 | INFO     | ***************************************
[2025-11-23 12:04:08] 2025-11-23 17:03:37,771 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 12:04:08] 2025-11-23 17:03:37,787 | INFO     | sufficient remaining disk space (26604470272 B)
[2025-11-23 12:04:08] 2025-11-23 17:03:37,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 12:04:08] 2025-11-23 17:03:37,788 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 12:04:08] 2025-11-23 17:03:37,788 | INFO     | update_server=False
[2025-11-23 12:04:08] 2025-11-23 17:03:37,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 12:04:08] 2025-11-23 17:03:37,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:04:08] 2025-11-23 17:03:37,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:04:08] 2025-11-23 17:03:37,789 | INFO     | aborting loop
[2025-11-23 12:04:08] 2025-11-23 17:03:37,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 12:04:08] 2025-11-23 17:03:38,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 12:04:08] 2025-11-23 17:03:38,353 | INFO     | all data control threads have been joined
[2025-11-23 12:04:08] 2025-11-23 17:03:38,794 | INFO     | [job] retrieve thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:38,794 | INFO     | [job] queue monitor thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:38,795 | INFO     | [job] job monitor thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:38,917 | INFO     | [payload] validate_post thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:39,094 | INFO     | all payload control threads have been joined
[2025-11-23 12:04:08] 2025-11-23 17:03:39,118 | INFO     | all job control threads have been joined
[2025-11-23 12:04:08] 2025-11-23 17:03:39,310 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:39,358 | INFO     | [data] control thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:39,553 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:39,694 | INFO     | [payload] failed_post thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:39,821 | INFO     | [job] validate thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:39,830 | INFO     | [data] copytool_out thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:39,924 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:40,048 | INFO     | [data] copytool_in thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:40,057 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:40,099 | INFO     | [payload] control thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:40,124 | INFO     | [job] control thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:42,310 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 12:04:08] 2025-11-23 17:03:43,721 | INFO     | [monitor] cgroup control has ended
[2025-11-23 12:04:08] 2025-11-23 17:03:45,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140271911442240)>', '<ExcThread(monitor, started 140270939137792)>']
[2025-11-23 12:04:08] 2025-11-23 17:03:50,545 | INFO     | all workflow threads have been joined
[2025-11-23 12:04:08] 2025-11-23 17:03:50,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 12:04:08] 2025-11-23 17:03:50,545 | INFO     | traces error code: 0
[2025-11-23 12:04:08] 2025-11-23 17:03:50,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 12:04:08] 2025-11-23 17:04:08,295 | INFO     | PID=5102 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 12:04:08] 2025-11-23 17:04:08,296 | INFO     | .. there are 3 such processes running
[2025-11-23 12:04:08] 2025-11-23 17:04:08,296 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 12:04:08] 2025-11-23 17:04:08,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 12:04:08] 2025-11-23 17:04:08,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 12:04:08] 2025-11-23 17:04:08,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 12:04:08] 2025-11-23 17:04:08,297 | INFO     | [monitor] control thread has ended
[2025-11-23 12:04:08] 2025-11-23 17:04:08,411 [wrapper] ==== pilot stdout END ====
[2025-11-23 12:04:08] 2025-11-23 17:04:08,413 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 12:04:08] 2025-11-23 17:04:08,415 [wrapper] pilotpid: 5102
[2025-11-23 12:04:08] 2025-11-23 17:04:08,417 [wrapper] Pilot exit status: 0
[2025-11-23 12:04:08] 2025-11-23 17:04:08,425 [wrapper] pandaids: 6895323633
[2025-11-23 12:04:08] 2025-11-23 17:04:08,453 [wrapper] cleanup supervisor_pilot  6944 5103
[2025-11-23 12:04:08] 2025-11-23 17:04:08,455 [wrapper] Test setup, not cleaning
[2025-11-23 12:04:08] 2025-11-23 17:04:08,457 [wrapper] apfmon messages muted
[2025-11-23 12:04:08] 2025-11-23 17:04:08,459 [wrapper] ==== wrapper stdout END ====
[2025-11-23 12:04:08] 2025-11-23 17:04:08,461 [wrapper] ==== wrapper stderr END ====
[2025-11-23 12:04:08]  *** Error codes and diagnostics ***
[2025-11-23 12:04:08]     "exeErrorCode": 0,
[2025-11-23 12:04:08]     "exeErrorDiag": "",
[2025-11-23 12:04:08]     "pilotErrorCode": 0,
[2025-11-23 12:04:08]     "pilotErrorDiag": "",
[2025-11-23 12:04:08]  *** Listing of results directory ***
[2025-11-23 12:04:08] total 1312200
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 07:50 pilot3.tar.gz
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 08:06 queuedata.json
[2025-11-23 12:04:08] -rwx------ 1 boincer umatlas     36292 Nov 21 08:06 runpilot2-wrapper.sh
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas       100 Nov 22 16:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 12:04:08] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 16:17 run_atlas
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas       105 Nov 22 16:17 job.xml
[2025-11-23 12:04:08] -rw-r--r-- 2 boincer umatlas 409523233 Nov 22 16:17 EVNT.47483658._000001.pool.root.1
[2025-11-23 12:04:08] drwxrwx--x 2 boincer umatlas      4096 Nov 22 16:17 shared
[2025-11-23 12:04:08] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 16:17 input.tar.gz
[2025-11-23 12:04:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 16:17 start_atlas.sh
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas         0 Nov 22 16:17 boinc_lockfile
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas      2780 Nov 22 16:17 pandaJob.out
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas        57 Nov 22 16:17 setup.sh.local
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas    989768 Nov 22 16:17 agis_schedconf.cvmfs.json
[2025-11-23 12:04:08] drwx------ 5 boincer umatlas      4096 Nov 22 16:17 pilot3
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas       533 Nov 23 11:48 boinc_task_state.xml
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 11:57 init_data.xml
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas 905873180 Nov 23 12:02 HITS.47556137._000006.pool.root.1
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas        95 Nov 23 12:03 pilot_heartbeat.json
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas      1067 Nov 23 12:03 memory_monitor_summary.json
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas   1526164 Nov 23 12:03 agis_ddmendpoints.agis.ALL.json
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas   2339351 Nov 23 12:03 log.47556137._000006.job.log.tgz.1
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas      8651 Nov 23 12:03 heartbeat.json
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas        29 Nov 23 12:03 wrapper_checkpoint.txt
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 12:03 boinc_mmap_file
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas       819 Nov 23 12:04 pilotlog.txt
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas   9848789 Nov 23 12:04 log.47556137._000006.job.log.1
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas       353 Nov 23 12:04 output.list
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas       620 Nov 23 12:04 runtime_log
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas  12206080 Nov 23 12:04 result.tar.gz
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas       668 Nov 23 12:04 tgbNDmv1fg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtcHKDmRK6fpn.diag
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 12:04 runtime_log.err
[2025-11-23 12:04:08] -rw-r--r-- 1 boincer umatlas     21283 Nov 23 12:04 stderr.txt
[2025-11-23 12:04:08] HITS file was successfully produced:
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas 905873180 Nov 23 12:02 shared/HITS.pool.root.1
[2025-11-23 12:04:08]  *** Contents of shared directory: ***
[2025-11-23 12:04:08] total 1297092
[2025-11-23 12:04:08] -rw-r--r-- 2 boincer umatlas 409523233 Nov 22 16:17 ATLAS.root_0
[2025-11-23 12:04:08] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 16:17 input.tar.gz
[2025-11-23 12:04:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 16:17 start_atlas.sh
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas 905873180 Nov 23 12:02 HITS.pool.root.1
[2025-11-23 12:04:08] -rw------- 1 boincer umatlas  12206080 Nov 23 12:04 result.tar.gz
12:04:10 (1257): run_atlas exited; CPU time 545747.153136
12:04:10 (1257): called boinc_finish(0)

</stderr_txt>
]]>

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