Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:11:12 (1805): wrapper (7.7.26015): starting
16:11:12 (1805): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 16:11:12] Arguments: --nthreads 4
[2025-11-22 16:11:12] Threads: 4
[2025-11-22 16:11:12] Checking for CVMFS
[2025-11-22 16:11:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 16:11:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 16:11:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 16:11:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 16:11:12] 2.11.2.0 2311 102207 72320 153184 2 81 20135145 20275201 1 130560 0 38974221 99.938 4506462 40457 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 16:11:12] CVMFS is ok
[2025-11-22 16:11:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 16:11:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 16:11:12] Further information can be found at the LHC@home message board.
[2025-11-22 16:11:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 16:11:12] Checking for apptainer binary...
[2025-11-22 16:11:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 16:11:12] Running /usr/bin/apptainer --version
[2025-11-22 16:11:12] apptainer version 1.3.2-1.el7
[2025-11-22 16:11:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 16:11:13] c-205-34.aglt2.org
[2025-11-22 16:11:13] apptainer works
[2025-11-22 16:11:13] Set ATHENA_PROC_NUMBER=4
[2025-11-22 16:11:13] Set ATHENA_CORE_NUMBER=4
[2025-11-22 16:11:13] Starting ATLAS job with PandaID=6894292422
[2025-11-22 16:11:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 01:17:45]  *** The last 200 lines of the pilot log: ***
[2025-11-23 01:17:45] 2025-11-23 06:17:10,607 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-23 01:17:45] 2025-11-23 06:17:12,189 | INFO     | time since job start (32751s) is within the limit (172800.0s)
[2025-11-23 01:17:45] 2025-11-23 06:17:13,002 | INFO     | monitor loop #2442: job 0:6894292422 is in state 'finished'
[2025-11-23 01:17:45] 2025-11-23 06:17:13,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:17:45] 2025-11-23 06:17:14,003 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 01:17:45] 2025-11-23 06:17:14,004 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3304.32075
[2025-11-23 01:17:45] 2025-11-23 06:17:14,004 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894292422/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 01:17:45] 2025-11-23 06:17:14,005 | INFO     | extracted standard info from prmon json
[2025-11-23 01:17:45] 2025-11-23 06:17:14,005 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 01:17:45] 2025-11-23 06:17:14,005 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 01:17:45] 2025-11-23 06:17:14,009 | INFO     | fitting pss+swap vs Time
[2025-11-23 01:17:45] 2025-11-23 06:17:14,009 | INFO     | sum of square deviations: 48017525428.0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,012 | INFO     | sum of deviations: 249570452229.00006
[2025-11-23 01:17:45] 2025-11-23 06:17:14,012 | INFO     | mean x: 1763862251.0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,012 | INFO     | mean y: 2264876.506517691
[2025-11-23 01:17:45] 2025-11-23 06:17:14,013 | INFO     | intersect: -9165385803.697794
[2025-11-23 01:17:45] 2025-11-23 06:17:14,013 | INFO     | chi2: 2.2380171355309737
[2025-11-23 01:17:45] 2025-11-23 06:17:14,013 | INFO     | sum of square deviations: 46688700513.0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,016 | INFO     | sum of deviations: 311015242360.5
[2025-11-23 01:17:45] 2025-11-23 06:17:14,016 | INFO     | mean x: 1763862098.5
[2025-11-23 01:17:45] 2025-11-23 06:17:14,016 | INFO     | mean y: 2271897.2913533836
[2025-11-23 01:17:45] 2025-11-23 06:17:14,016 | INFO     | intersect: -11747637438.967186
[2025-11-23 01:17:45] 2025-11-23 06:17:14,017 | INFO     | chi2: 1.225269007177264
[2025-11-23 01:17:45] 2025-11-23 06:17:14,017 | INFO     | current chi2=1.225269007177264 (change=45.25202744318726 %)
[2025-11-23 01:17:45] 2025-11-23 06:17:14,017 | INFO     | sum of square deviations: 45384620248.0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,020 | INFO     | sum of deviations: 305571554506.0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,020 | INFO     | mean x: 1763861946.0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,020 | INFO     | mean y: 2271260.70398482
[2025-11-23 01:17:45] 2025-11-23 06:17:14,020 | INFO     | intersect: -11873690988.79727
[2025-11-23 01:17:45] 2025-11-23 06:17:14,021 | INFO     | chi2: 1.2243843387611844
[2025-11-23 01:17:45] 2025-11-23 06:17:14,021 | INFO     | current chi2=1.2243843387611844 (change=0.07220197449683108 %)
[2025-11-23 01:17:45] 2025-11-23 06:17:14,021 | INFO     | right removable region: 526
[2025-11-23 01:17:45] 2025-11-23 06:17:14,021 | INFO     | sum of square deviations: 46688700513.0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,024 | INFO     | sum of deviations: 183949668496.00003
[2025-11-23 01:17:45] 2025-11-23 06:17:14,024 | INFO     | mean x: 1763862403.5
[2025-11-23 01:17:45] 2025-11-23 06:17:14,024 | INFO     | mean y: 2272374.454887218
[2025-11-23 01:17:45] 2025-11-23 06:17:14,024 | INFO     | intersect: -6947201498.908534
[2025-11-23 01:17:45] 2025-11-23 06:17:14,024 | INFO     | chi2: 1.0678861703519804
[2025-11-23 01:17:45] 2025-11-23 06:17:14,024 | INFO     | current chi2=1.0678861703519804 (change=52.28427193884633 %)
[2025-11-23 01:17:45] 2025-11-23 06:17:14,025 | INFO     | sum of square deviations: 45384620248.0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,028 | INFO     | sum of deviations: 168718771805.0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,028 | INFO     | mean x: 1763862556.0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,028 | INFO     | mean y: 2274154.8918406074
[2025-11-23 01:17:45] 2025-11-23 06:17:14,028 | INFO     | intersect: -6554941096.771799
[2025-11-23 01:17:45] 2025-11-23 06:17:14,028 | INFO     | chi2: 1.0535242129365558
[2025-11-23 01:17:45] 2025-11-23 06:17:14,028 | INFO     | current chi2=1.0535242129365558 (change=1.3448959087737595 %)
[2025-11-23 01:17:45] 2025-11-23 06:17:14,028 | INFO     | left removable region: 20
[2025-11-23 01:17:45] 2025-11-23 06:17:14,029 | INFO     | sum of square deviations: 40172446242.5
[2025-11-23 01:17:45] 2025-11-23 06:17:14,031 | INFO     | sum of deviations: 200484512990.49994
[2025-11-23 01:17:45] 2025-11-23 06:17:14,032 | INFO     | mean x: 1763862525.5
[2025-11-23 01:17:45] 2025-11-23 06:17:14,032 | INFO     | mean y: 2283720.322134387
[2025-11-23 01:17:45] 2025-11-23 06:17:14,032 | INFO     | intersect: -8800444330.451754
[2025-11-23 01:17:45] 2025-11-23 06:17:14,032 | INFO     | chi2: 0.02577709143276147
[2025-11-23 01:17:45] 2025-11-23 06:17:14,032 | INFO     | current memory leak: 4.99 B/s (using 506 data points, chi2=0.03)
[2025-11-23 01:17:45] 2025-11-23 06:17:14,032 | INFO     | could have reported an average CPU frequency of 3223 MHz (21 samples)
[2025-11-23 01:17:45] 2025-11-23 06:17:14,032 | INFO     | ..............................
[2025-11-23 01:17:45] 2025-11-23 06:17:14,032 | INFO     | . Timing measurements:
[2025-11-23 01:17:45] 2025-11-23 06:17:14,032 | INFO     | . get job = 0 s
[2025-11-23 01:17:45] 2025-11-23 06:17:14,032 | INFO     | . initial setup = 2 s
[2025-11-23 01:17:45] 2025-11-23 06:17:14,033 | INFO     | . payload setup = 3 s
[2025-11-23 01:17:45] 2025-11-23 06:17:14,033 | INFO     | . stage-in = 0 s
[2025-11-23 01:17:45] 2025-11-23 06:17:14,033 | INFO     | . payload execution = 32721 s
[2025-11-23 01:17:45] 2025-11-23 06:17:14,033 | INFO     | . stage-out = 2 s
[2025-11-23 01:17:45] 2025-11-23 06:17:14,033 | INFO     | . log creation = 0 s
[2025-11-23 01:17:45] 2025-11-23 06:17:14,033 | INFO     | ..............................
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | 
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | job summary report
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | --------------------------------------------------
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | PanDA job id: 6894292422
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | task id: 47533967
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | errors: (none)
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | pilot state: finished 
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | transexitcode: 0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | exeerrorcode: 0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | exeerrordiag: 
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | exitcode: 0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,070 | INFO     | exitmsg: OK
[2025-11-23 01:17:45] 2025-11-23 06:17:14,071 | INFO     | cpuconsumptiontime: 129028 s
[2025-11-23 01:17:45] 2025-11-23 06:17:14,071 | INFO     | nevents: 1000
[2025-11-23 01:17:45] 2025-11-23 06:17:14,071 | INFO     | neventsw: 0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,071 | INFO     | pid: 11856
[2025-11-23 01:17:45] 2025-11-23 06:17:14,071 | INFO     | pgrp: 11856
[2025-11-23 01:17:45] 2025-11-23 06:17:14,071 | INFO     | corecount: 4
[2025-11-23 01:17:45] 2025-11-23 06:17:14,071 | INFO     | event service: False
[2025-11-23 01:17:45] 2025-11-23 06:17:14,071 | INFO     | sizes: {0: 2298755, 3: 2299017, 11: 2299045, 32728: 2339738, 32729: 2339737, 32732: 2348787, 32734: 2348971, 32739: 2349217}
[2025-11-23 01:17:45] 2025-11-23 06:17:14,071 | INFO     | --------------------------------------------------
[2025-11-23 01:17:45] 2025-11-23 06:17:14,071 | INFO     | 
[2025-11-23 01:17:45] 2025-11-23 06:17:14,071 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 01:17:45] 2025-11-23 06:17:14,083 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,083 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,083 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,083 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | job 6894292422 has completed (purged errors)
[2025-11-23 01:17:45] 2025-11-23 06:17:14,084 | INFO     | overall cleanup function is called
[2025-11-23 01:17:45] 2025-11-23 06:17:15,092 | INFO     | --- collectZombieJob: --- 10, [11856]
[2025-11-23 01:17:45] 2025-11-23 06:17:15,093 | INFO     | zombie collector waiting for pid 11856
[2025-11-23 01:17:45] 2025-11-23 06:17:15,093 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 01:17:45] 2025-11-23 06:17:15,093 | INFO     | collected zombie processes
[2025-11-23 01:17:45] 2025-11-23 06:17:15,093 | INFO     | will attempt to kill all subprocesses of pid=11856
[2025-11-23 01:17:45] 2025-11-23 06:17:15,124 | INFO     | process IDs to be killed: [11856] (in reverse order)
[2025-11-23 01:17:45] 2025-11-23 06:17:15,146 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 01:17:45] 2025-11-23 06:17:15,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 01:17:45] 2025-11-23 06:17:15,147 | INFO     | did not find any defunct processes belonging to 11856
[2025-11-23 01:17:45] 2025-11-23 06:17:15,148 | INFO     | did not find any defunct processes belonging to 11856
[2025-11-23 01:17:45] 2025-11-23 06:17:15,149 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 01:17:45] 2025-11-23 06:17:15,149 | INFO     | ready for new job
[2025-11-23 01:17:45] 2025-11-23 06:17:15,149 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 01:17:45] 2025-11-23 06:17:15,150 | INFO     | ***************************************
[2025-11-23 01:17:45] 2025-11-23 06:17:15,150 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 01:17:45] 2025-11-23 06:17:15,151 | INFO     | ***************************************
[2025-11-23 01:17:45] 2025-11-23 06:17:15,151 | INFO     | 
[2025-11-23 01:17:45] 2025-11-23 06:17:15,151 | INFO     | architecture information:
[2025-11-23 01:17:45] 2025-11-23 06:17:15,151 | INFO     | executing command: cat /etc/os-release
[2025-11-23 01:17:45] 2025-11-23 06:17:15,159 | INFO     | cat /etc/os-release:
[2025-11-23 01:17:45] NAME="CentOS Linux"
[2025-11-23 01:17:45] VERSION="7 (Core)"
[2025-11-23 01:17:45] ID="centos"
[2025-11-23 01:17:45] ID_LIKE="rhel fedora"
[2025-11-23 01:17:45] VERSION_ID="7"
[2025-11-23 01:17:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 01:17:45] ANSI_COLOR="0;31"
[2025-11-23 01:17:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 01:17:45] HOME_URL="https://www.centos.org/"
[2025-11-23 01:17:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 01:17:45] 
[2025-11-23 01:17:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 01:17:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 01:17:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 01:17:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 01:17:45] 
[2025-11-23 01:17:45] 2025-11-23 06:17:15,160 | INFO     | ***************************************
[2025-11-23 01:17:45] 2025-11-23 06:17:15,662 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 01:17:45] 2025-11-23 06:17:15,831 | INFO     | sufficient remaining disk space (28245491712 B)
[2025-11-23 01:17:45] 2025-11-23 06:17:15,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 01:17:45] 2025-11-23 06:17:15,831 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 01:17:45] 2025-11-23 06:17:15,832 | INFO     | update_server=False
[2025-11-23 01:17:45] 2025-11-23 06:17:15,832 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 01:17:45] 2025-11-23 06:17:15,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:17:45] 2025-11-23 06:17:15,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 01:17:45] 2025-11-23 06:17:15,940 | INFO     | [monitor] cgroup control has ended
[2025-11-23 01:17:45] 2025-11-23 06:17:15,999 | INFO     | all payload control threads have been joined
[2025-11-23 01:17:45] 2025-11-23 06:17:16,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:17:45] 2025-11-23 06:17:16,507 | INFO     | aborting loop
[2025-11-23 01:17:45] 2025-11-23 06:17:16,720 | INFO     | all data control threads have been joined
[2025-11-23 01:17:45] 2025-11-23 06:17:16,833 | INFO     | [job] retrieve thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:16,836 | INFO     | [job] queue monitor thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:16,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 01:17:45] 2025-11-23 06:17:17,005 | INFO     | [payload] control thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:17,093 | INFO     | [payload] validate_post thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:17,106 | INFO     | [data] copytool_in thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:17,211 | INFO     | [job] validate thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:17,246 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:17,346 | INFO     | all job control threads have been joined
[2025-11-23 01:17:45] 2025-11-23 06:17:17,411 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:17,512 | INFO     | [job] job monitor thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:17,614 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:17,718 | INFO     | [payload] failed_post thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:17,726 | INFO     | [data] control thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:17,756 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:18,352 | INFO     | [job] control thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:18,849 | INFO     | [data] copytool_out thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:19,838 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 01:17:45] 2025-11-23 06:17:20,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621476013888)>', '<ExcThread(monitor, started 140620886685440)>']
[2025-11-23 01:17:45] 2025-11-23 06:17:25,619 | INFO     | all workflow threads have been joined
[2025-11-23 01:17:45] 2025-11-23 06:17:25,619 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 01:17:45] 2025-11-23 06:17:25,619 | INFO     | traces error code: 0
[2025-11-23 01:17:45] 2025-11-23 06:17:25,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 01:17:45] 2025-11-23 06:17:45,296 | INFO     | PID=5489 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 01:17:45] 2025-11-23 06:17:45,296 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 01:17:45] 2025-11-23 06:17:45,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 01:17:45] 2025-11-23 06:17:45,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 01:17:45] 2025-11-23 06:17:45,296 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 01:17:45] 2025-11-23 06:17:45,296 | INFO     | [monitor] control thread has ended
[2025-11-23 01:17:45] 2025-11-23 06:17:45,352 [wrapper] ==== pilot stdout END ====
[2025-11-23 01:17:45] 2025-11-23 06:17:45,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 01:17:45] 2025-11-23 06:17:45,356 [wrapper] pilotpid: 5489
[2025-11-23 01:17:45] 2025-11-23 06:17:45,358 [wrapper] Pilot exit status: 0
[2025-11-23 01:17:45] 2025-11-23 06:17:45,364 [wrapper] pandaids: 6894292422
[2025-11-23 01:17:45] 2025-11-23 06:17:45,378 [wrapper] cleanup supervisor_pilot 22869 5490
[2025-11-23 01:17:45] 2025-11-23 06:17:45,380 [wrapper] Test setup, not cleaning
[2025-11-23 01:17:45] 2025-11-23 06:17:45,382 [wrapper] apfmon messages muted
[2025-11-23 01:17:45] 2025-11-23 06:17:45,384 [wrapper] ==== wrapper stdout END ====
[2025-11-23 01:17:45] 2025-11-23 06:17:45,385 [wrapper] ==== wrapper stderr END ====
[2025-11-23 01:17:45]  *** Error codes and diagnostics ***
[2025-11-23 01:17:45]     "exeErrorCode": 0,
[2025-11-23 01:17:45]     "exeErrorDiag": "",
[2025-11-23 01:17:45]     "pilotErrorCode": 0,
[2025-11-23 01:17:45]     "pilotErrorDiag": "",
[2025-11-23 01:17:45]  *** Listing of results directory ***
[2025-11-23 01:17:45] total 1314896
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 07:22 pilot3.tar.gz
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 07:27 queuedata.json
[2025-11-23 01:17:45] -rwx------ 1 boincer umatlas     36292 Nov 21 07:27 runpilot2-wrapper.sh
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas       100 Nov 22 16:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 01:17:45] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 16:11 run_atlas
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas       105 Nov 22 16:11 job.xml
[2025-11-23 01:17:45] -rw-r--r-- 2 boincer umatlas 411384748 Nov 22 16:11 EVNT.47493127._002453.pool.root.1
[2025-11-23 01:17:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 16:11 start_atlas.sh
[2025-11-23 01:17:45] drwxrwx--x 2 boincer umatlas      4096 Nov 22 16:11 shared
[2025-11-23 01:17:45] -rw-r--r-- 2 boincer umatlas    590109 Nov 22 16:11 input.tar.gz
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas         0 Nov 22 16:11 boinc_lockfile
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 16:11 pandaJob.out
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas        57 Nov 22 16:11 setup.sh.local
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas    989768 Nov 22 16:11 agis_schedconf.cvmfs.json
[2025-11-23 01:17:45] drwx------ 5 boincer umatlas      4096 Nov 22 16:11 pilot3
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas       533 Nov 23 01:13 boinc_task_state.xml
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas      6240 Nov 23 01:13 init_data.xml
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas 919323434 Nov 23 01:16 HITS.47533967._004247.pool.root.1
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas        95 Nov 23 01:16 pilot_heartbeat.json
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas      1051 Nov 23 01:17 memory_monitor_summary.json
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas   1526164 Nov 23 01:17 agis_ddmendpoints.agis.ALL.json
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas   1354988 Nov 23 01:17 log.47533967._004247.job.log.tgz.1
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas      8641 Nov 23 01:17 heartbeat.json
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 01:17 boinc_mmap_file
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas        29 Nov 23 01:17 wrapper_checkpoint.txt
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas       744 Nov 23 01:17 pilotlog.txt
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas   4554781 Nov 23 01:17 log.47533967._004247.job.log.1
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas       353 Nov 23 01:17 output.list
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas       620 Nov 23 01:17 runtime_log
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas   5928960 Nov 23 01:17 result.tar.gz
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 01:17 runtime_log.err
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas       665 Nov 23 01:17 jRSKDmlPfg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVQJKDmGjQGVo.diag
[2025-11-23 01:17:45] -rw-r--r-- 1 boincer umatlas     21350 Nov 23 01:17 stderr.txt
[2025-11-23 01:17:45] HITS file was successfully produced:
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas 919323434 Nov 23 01:16 shared/HITS.pool.root.1
[2025-11-23 01:17:45]  *** Contents of shared directory: ***
[2025-11-23 01:17:45] total 1305920
[2025-11-23 01:17:45] -rw-r--r-- 2 boincer umatlas 411384748 Nov 22 16:11 ATLAS.root_0
[2025-11-23 01:17:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 16:11 start_atlas.sh
[2025-11-23 01:17:45] -rw-r--r-- 2 boincer umatlas    590109 Nov 22 16:11 input.tar.gz
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas 919323434 Nov 23 01:16 HITS.pool.root.1
[2025-11-23 01:17:45] -rw------- 1 boincer umatlas   5928960 Nov 23 01:17 result.tar.gz
01:17:47 (1805): run_atlas exited; CPU time 128973.617774
01:17:47 (1805): called boinc_finish(0)

</stderr_txt>
]]>

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