Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:03:24 (3722): wrapper (7.7.26015): starting
15:03:24 (3722): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 15:03:24] Arguments: --nthreads 12
[2025-11-22 15:03:24] Threads: 12
[2025-11-22 15:03:24] Checking for CVMFS
[2025-11-22 15:03:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 15:03:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 15:03:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 15:03:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 15:03:25] 2.11.2.0 3081 282330 94412 153183 0 82 11103102 20275201 1 130560 1 127242681 99.969 16219974 14085 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 15:03:25] CVMFS is ok
[2025-11-22 15:03:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 15:03:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 15:03:25] Further information can be found at the LHC@home message board.
[2025-11-22 15:03:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 15:03:25] Checking for apptainer binary...
[2025-11-22 15:03:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 15:03:25] Running /usr/bin/apptainer --version
[2025-11-22 15:03:25] apptainer version 1.3.2-1.el7
[2025-11-22 15:03:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 15:03:26] c-205-29.aglt2.org
[2025-11-22 15:03:26] apptainer works
[2025-11-22 15:03:26] Set ATHENA_PROC_NUMBER=12
[2025-11-22 15:03:26] Set ATHENA_CORE_NUMBER=12
[2025-11-22 15:03:26] Starting ATLAS job with PandaID=6895330850
[2025-11-22 15:03:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 22:05:28]  *** The last 200 lines of the pilot log: ***
[2025-11-22 22:05:28] 2025-11-23 03:04:43,012 | INFO     | fitting pss+swap vs Time
[2025-11-22 22:05:28] 2025-11-23 03:04:43,012 | INFO     | sum of square deviations: 22002664832.628014
[2025-11-22 22:05:28] 2025-11-23 03:04:43,016 | INFO     | sum of deviations: 369451242551.8654
[2025-11-22 22:05:28] 2025-11-23 03:04:43,016 | INFO     | mean x: 1763854447.6763284
[2025-11-22 22:05:28] 2025-11-23 03:04:43,016 | INFO     | mean y: 3417631.2004830916
[2025-11-22 22:05:28] 2025-11-23 03:04:43,017 | INFO     | intersect: -29613822931.7836
[2025-11-22 22:05:28] 2025-11-23 03:04:43,017 | INFO     | chi2: 6.396523790245834
[2025-11-22 22:05:28] 2025-11-23 03:04:43,017 | INFO     | sufficient remaining disk space (28244443136 B)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,018 | INFO     | sum of square deviations: 21215072329.970726
[2025-11-22 22:05:28] 2025-11-23 03:04:43,022 | INFO     | sum of deviations: 536277519760.1002
[2025-11-22 22:05:28] 2025-11-23 03:04:43,022 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,022 | INFO     | mean x: 1763854295.1784842
[2025-11-22 22:05:28] 2025-11-23 03:04:43,022 | INFO     | mean y: 3449912.806845966
[2025-11-22 22:05:28] 2025-11-23 03:04:43,022 | INFO     | intersect: -44583501850.737885
[2025-11-22 22:05:28] 2025-11-23 03:04:43,023 | INFO     | chi2: 3.025284980502512
[2025-11-22 22:05:28] 2025-11-23 03:04:43,023 | INFO     | current chi2=3.025284980502512 (change=52.70423311618383 %)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,024 | INFO     | sum of square deviations: 20446478734.168427
[2025-11-22 22:05:28] 2025-11-23 03:04:43,027 | INFO     | sum of deviations: 572805248750.0891
[2025-11-22 22:05:28] 2025-11-23 03:04:43,027 | INFO     | mean x: 1763854142.678218
[2025-11-22 22:05:28] 2025-11-23 03:04:43,027 | INFO     | mean y: 3457110.123762376
[2025-11-22 22:05:28] 2025-11-23 03:04:43,028 | INFO     | intersect: -49410670578.63415
[2025-11-22 22:05:28] 2025-11-23 03:04:43,028 | INFO     | chi2: 2.615041935640002
[2025-11-22 22:05:28] 2025-11-23 03:04:43,028 | INFO     | current chi2=2.615041935640002 (change=13.560476038008392 %)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,028 | INFO     | right removable region: 403
[2025-11-22 22:05:28] 2025-11-23 03:04:43,029 | INFO     | sum of square deviations: 21215027799.970722
[2025-11-22 22:05:28] 2025-11-23 03:04:43,032 | INFO     | sum of deviations: 228140942638.3349
[2025-11-22 22:05:28] 2025-11-23 03:04:43,033 | INFO     | mean x: 1763854600.1784842
[2025-11-22 22:05:28] 2025-11-23 03:04:43,033 | INFO     | mean y: 3444913.378973105
[2025-11-22 22:05:28] 2025-11-23 03:04:43,033 | INFO     | intersect: -18964592977.301426
[2025-11-22 22:05:28] 2025-11-23 03:04:43,033 | INFO     | chi2: 3.9701160750141455
[2025-11-22 22:05:28] 2025-11-23 03:04:43,034 | INFO     | current chi2=3.9701160750141455 (change=37.93322427615697 %)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,034 | INFO     | sum of square deviations: 20446414379.809425
[2025-11-22 22:05:28] 2025-11-23 03:04:43,038 | INFO     | sum of deviations: 197759709319.19287
[2025-11-22 22:05:28] 2025-11-23 03:04:43,038 | INFO     | mean x: 1763854752.6806931
[2025-11-22 22:05:28] 2025-11-23 03:04:43,038 | INFO     | mean y: 3450935.0247524753
[2025-11-22 22:05:28] 2025-11-23 03:04:43,038 | INFO     | intersect: -17056723856.104662
[2025-11-22 22:05:28] 2025-11-23 03:04:43,038 | INFO     | chi2: 3.926532059791955
[2025-11-22 22:05:28] 2025-11-23 03:04:43,039 | INFO     | current chi2=3.926532059791955 (change=1.0978020390004692 %)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,039 | INFO     | left removable region: 20
[2025-11-22 22:05:28] 2025-11-23 03:04:43,039 | INFO     | sum of square deviations: 17420874156.5694
[2025-11-22 22:05:28] 2025-11-23 03:04:43,042 | INFO     | sum of deviations: 349939266265.538
[2025-11-22 22:05:28] 2025-11-23 03:04:43,043 | INFO     | mean x: 1763854722.1801567
[2025-11-22 22:05:28] 2025-11-23 03:04:43,043 | INFO     | mean y: 3502322.7023498695
[2025-11-22 22:05:28] 2025-11-23 03:04:43,043 | INFO     | intersect: -35427671895.72612
[2025-11-22 22:05:28] 2025-11-23 03:04:43,043 | INFO     | chi2: 0.06623232448742578
[2025-11-22 22:05:28] 2025-11-23 03:04:43,043 | INFO     | current memory leak: 20.09 B/s (using 383 data points, chi2=0.07)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,044 | INFO     | could have reported an average CPU frequency of 2414 MHz (17 samples)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,044 | INFO     | ..............................
[2025-11-22 22:05:28] 2025-11-23 03:04:43,044 | INFO     | . Timing measurements:
[2025-11-22 22:05:28] 2025-11-23 03:04:43,044 | INFO     | . get job = 0 s
[2025-11-22 22:05:28] 2025-11-23 03:04:43,045 | INFO     | . initial setup = 2 s
[2025-11-22 22:05:28] 2025-11-23 03:04:43,045 | INFO     | . payload setup = 7 s
[2025-11-22 22:05:28] 2025-11-23 03:04:43,045 | INFO     | . stage-in = 0 s
[2025-11-22 22:05:28] 2025-11-23 03:04:43,045 | INFO     | . payload execution = 25225 s
[2025-11-22 22:05:28] 2025-11-23 03:04:43,045 | INFO     | . stage-out = 3 s
[2025-11-22 22:05:28] 2025-11-23 03:04:43,045 | INFO     | . log creation = 0 s
[2025-11-22 22:05:28] 2025-11-23 03:04:43,045 | INFO     | ..............................
[2025-11-22 22:05:28] 2025-11-23 03:04:43,129 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6895330850: 10664778 B (within 2537553920 B limit)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,129 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6895330850/HITS.47556137._001443.pool.root.1 does not exist (skip from workdir size calculation)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,129 | INFO     | total size of present files: 0 B (workdir size: 10664778 B)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,129 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6895330850/HITS.47556137._001443.pool.root.1 since it does not exist
[2025-11-22 22:05:28] 2025-11-23 03:04:43,219 | INFO     | number of running child processes to parent process 14812: 1
[2025-11-22 22:05:28] 2025-11-23 03:04:43,219 | INFO     | maximum number of monitored processes: 20
[2025-11-22 22:05:28] 2025-11-23 03:04:43,219 | INFO     | aborting job monitoring since job object (job id=6895330850) has expired
[2025-11-22 22:05:28] 2025-11-23 03:04:43,467 | INFO     | 
[2025-11-22 22:05:28] 2025-11-23 03:04:43,467 | INFO     | job summary report
[2025-11-22 22:05:28] 2025-11-23 03:04:43,467 | INFO     | --------------------------------------------------
[2025-11-22 22:05:28] 2025-11-23 03:04:43,467 | INFO     | PanDA job id: 6895330850
[2025-11-22 22:05:28] 2025-11-23 03:04:43,467 | INFO     | task id: 47556137
[2025-11-22 22:05:28] 2025-11-23 03:04:43,467 | INFO     | errors: (none)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 22:05:28] 2025-11-23 03:04:43,468 | INFO     | pilot state: finished 
[2025-11-22 22:05:28] 2025-11-23 03:04:43,468 | INFO     | transexitcode: 0
[2025-11-22 22:05:28] 2025-11-23 03:04:43,468 | INFO     | exeerrorcode: 0
[2025-11-22 22:05:28] 2025-11-23 03:04:43,468 | INFO     | exeerrordiag: 
[2025-11-22 22:05:28] 2025-11-23 03:04:43,468 | INFO     | exitcode: 0
[2025-11-22 22:05:28] 2025-11-23 03:04:43,469 | INFO     | exitmsg: OK
[2025-11-22 22:05:28] 2025-11-23 03:04:43,469 | INFO     | cpuconsumptiontime: 289438 s
[2025-11-22 22:05:28] 2025-11-23 03:04:43,469 | INFO     | nevents: 1000
[2025-11-22 22:05:28] 2025-11-23 03:04:43,469 | INFO     | neventsw: 0
[2025-11-22 22:05:28] 2025-11-23 03:04:43,469 | INFO     | pid: 14812
[2025-11-22 22:05:28] 2025-11-23 03:04:43,469 | INFO     | pgrp: 14812
[2025-11-22 22:05:28] 2025-11-23 03:04:43,470 | INFO     | corecount: 12
[2025-11-22 22:05:28] 2025-11-23 03:04:43,470 | INFO     | event service: False
[2025-11-22 22:05:28] 2025-11-23 03:04:43,470 | INFO     | sizes: {0: 2298585, 1: 2298784, 6: 2299046, 12: 2299074, 25236: 2336027, 25240: 2345205, 25246: 2345459}
[2025-11-22 22:05:28] 2025-11-23 03:04:43,470 | INFO     | --------------------------------------------------
[2025-11-22 22:05:28] 2025-11-23 03:04:43,470 | INFO     | 
[2025-11-22 22:05:28] 2025-11-23 03:04:43,470 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 22:05:28] 2025-11-23 03:04:43,496 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,496 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,496 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,497 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,499 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 22:05:28] 2025-11-23 03:04:43,499 | INFO     | job 6895330850 has completed (purged errors)
[2025-11-22 22:05:28] 2025-11-23 03:04:43,499 | INFO     | overall cleanup function is called
[2025-11-22 22:05:28] 2025-11-23 03:04:44,511 | INFO     | --- collectZombieJob: --- 10, [14812]
[2025-11-22 22:05:28] 2025-11-23 03:04:44,511 | INFO     | zombie collector waiting for pid 14812
[2025-11-22 22:05:28] 2025-11-23 03:04:44,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 22:05:28] 2025-11-23 03:04:44,511 | INFO     | collected zombie processes
[2025-11-22 22:05:28] 2025-11-23 03:04:44,512 | INFO     | will attempt to kill all subprocesses of pid=14812
[2025-11-22 22:05:28] 2025-11-23 03:04:44,602 | INFO     | process IDs to be killed: [14812] (in reverse order)
[2025-11-22 22:05:28] 2025-11-23 03:04:44,654 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 22:05:28] 2025-11-23 03:04:44,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 22:05:28] 2025-11-23 03:04:44,658 | INFO     | did not find any defunct processes belonging to 14812
[2025-11-22 22:05:28] 2025-11-23 03:04:44,661 | INFO     | did not find any defunct processes belonging to 14812
[2025-11-22 22:05:28] 2025-11-23 03:04:44,663 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 22:05:28] 2025-11-23 03:04:44,664 | INFO     | ready for new job
[2025-11-22 22:05:28] 2025-11-23 03:04:44,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 22:05:28] 2025-11-23 03:04:44,666 | INFO     | ***************************************
[2025-11-22 22:05:28] 2025-11-23 03:04:44,666 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 22:05:28] 2025-11-23 03:04:44,666 | INFO     | ***************************************
[2025-11-22 22:05:28] 2025-11-23 03:04:44,666 | INFO     | 
[2025-11-22 22:05:28] 2025-11-23 03:04:44,667 | INFO     | architecture information:
[2025-11-22 22:05:28] 2025-11-23 03:04:44,667 | INFO     | executing command: cat /etc/os-release
[2025-11-22 22:05:28] 2025-11-23 03:04:44,681 | INFO     | cat /etc/os-release:
[2025-11-22 22:05:28] NAME="CentOS Linux"
[2025-11-22 22:05:28] VERSION="7 (Core)"
[2025-11-22 22:05:28] ID="centos"
[2025-11-22 22:05:28] ID_LIKE="rhel fedora"
[2025-11-22 22:05:28] VERSION_ID="7"
[2025-11-22 22:05:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 22:05:28] ANSI_COLOR="0;31"
[2025-11-22 22:05:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 22:05:28] HOME_URL="https://www.centos.org/"
[2025-11-22 22:05:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 22:05:28] 
[2025-11-22 22:05:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 22:05:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 22:05:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 22:05:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 22:05:28] 
[2025-11-22 22:05:28] 2025-11-23 03:04:44,682 | INFO     | ***************************************
[2025-11-22 22:05:28] 2025-11-23 03:04:45,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 22:05:28] 2025-11-23 03:04:45,200 | INFO     | sufficient remaining disk space (28259123200 B)
[2025-11-22 22:05:28] 2025-11-23 03:04:45,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 22:05:28] 2025-11-23 03:04:45,200 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 22:05:28] 2025-11-23 03:04:45,201 | INFO     | update_server=False
[2025-11-22 22:05:28] 2025-11-23 03:04:45,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 22:05:28] 2025-11-23 03:04:45,201 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:05:28] 2025-11-23 03:04:45,201 | INFO     | aborting loop
[2025-11-22 22:05:28] 2025-11-23 03:04:45,492 | INFO     | all job control threads have been joined
[2025-11-22 22:05:28] 2025-11-23 03:04:45,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 22:05:28] 2025-11-23 03:04:45,894 | INFO     | all payload control threads have been joined
[2025-11-22 22:05:28] 2025-11-23 03:04:46,096 | INFO     | all data control threads have been joined
[2025-11-22 22:05:28] 2025-11-23 03:04:46,206 | INFO     | [job] retrieve thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:46,207 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:46,207 | INFO     | [job] job monitor thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:46,300 | INFO     | [payload] validate_post thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:46,325 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:46,497 | INFO     | [job] control thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:46,510 | INFO     | [data] copytool_in thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:46,899 | INFO     | [payload] control thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:47,035 | INFO     | [payload] failed_post thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:47,055 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:47,102 | INFO     | [data] control thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:47,664 | INFO     | [job] validate thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:47,670 | INFO     | [data] copytool_out thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:48,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:05:28] 2025-11-23 03:04:48,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 22:05:28] 2025-11-23 03:04:49,142 | INFO     | [job] queue monitor thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:52,571 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:04:55,873 | INFO     | job.realtimelogging is not enabled
[2025-11-22 22:05:28] 2025-11-23 03:04:56,875 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 22:05:28] 2025-11-23 03:05:14,741 | INFO     | PID=7489 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 22:05:28] 2025-11-23 03:05:14,742 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 22:05:28] 2025-11-23 03:05:14,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 22:05:28] 2025-11-23 03:05:14,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 22:05:28] 2025-11-23 03:05:22,336 | INFO     | [monitor] cgroup control has ended
[2025-11-22 22:05:28] 2025-11-23 03:05:23,354 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801003083584)>', '<ExcThread(monitor, started 139800396928768)>']
[2025-11-22 22:05:28] 2025-11-23 03:05:23,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 22:05:28] 2025-11-23 03:05:23,788 | INFO     | [monitor] control thread has ended
[2025-11-22 22:05:28] 2025-11-23 03:05:28,379 | INFO     | all workflow threads have been joined
[2025-11-22 22:05:28] 2025-11-23 03:05:28,379 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 22:05:28] 2025-11-23 03:05:28,380 | INFO     | traces error code: 0
[2025-11-22 22:05:28] 2025-11-23 03:05:28,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 22:05:28] 2025-11-23 03:05:28,481 [wrapper] ==== pilot stdout END ====
[2025-11-22 22:05:28] 2025-11-23 03:05:28,485 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 22:05:28] 2025-11-23 03:05:28,488 [wrapper] pilotpid: 7489
[2025-11-22 22:05:28] 2025-11-23 03:05:28,492 [wrapper] Pilot exit status: 0
[2025-11-22 22:05:28] 2025-11-23 03:05:28,506 [wrapper] pandaids: 6895330850
[2025-11-22 22:05:28] 2025-11-23 03:05:28,551 [wrapper] cleanup supervisor_pilot 23555 7490
[2025-11-22 22:05:28] 2025-11-23 03:05:28,555 [wrapper] Test setup, not cleaning
[2025-11-22 22:05:28] 2025-11-23 03:05:28,559 [wrapper] apfmon messages muted
[2025-11-22 22:05:28] 2025-11-23 03:05:28,563 [wrapper] ==== wrapper stdout END ====
[2025-11-22 22:05:28] 2025-11-23 03:05:28,566 [wrapper] ==== wrapper stderr END ====
[2025-11-22 22:05:28]  *** Error codes and diagnostics ***
[2025-11-22 22:05:28]     "exeErrorCode": 0,
[2025-11-22 22:05:28]     "exeErrorDiag": "",
[2025-11-22 22:05:28]     "pilotErrorCode": 0,
[2025-11-22 22:05:28]     "pilotErrorDiag": "",
[2025-11-22 22:05:28]  *** Listing of results directory ***
[2025-11-22 22:05:28] total 1304844
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 16:26 pilot3.tar.gz
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 16:47 queuedata.json
[2025-11-22 22:05:28] -rwx------ 1 boincer umatlas     36292 Nov 21 16:48 runpilot2-wrapper.sh
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas       100 Nov 22 15:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 22:05:28] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 15:03 run_atlas
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas       105 Nov 22 15:03 job.xml
[2025-11-22 22:05:28] -rw-r--r-- 2 boincer umatlas 408554081 Nov 22 15:03 EVNT.47483658._000145.pool.root.1
[2025-11-22 22:05:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 15:03 start_atlas.sh
[2025-11-22 22:05:28] drwxrwx--x 2 boincer umatlas      4096 Nov 22 15:03 shared
[2025-11-22 22:05:28] -rw-r--r-- 2 boincer umatlas    590105 Nov 22 15:03 input.tar.gz
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas         0 Nov 22 15:03 boinc_lockfile
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 15:03 pandaJob.out
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas        57 Nov 22 15:03 setup.sh.local
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas    989768 Nov 22 15:03 agis_schedconf.cvmfs.json
[2025-11-22 22:05:28] drwx------ 5 boincer umatlas      4096 Nov 22 15:03 pilot3
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas       532 Nov 22 21:55 boinc_task_state.xml
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas      5955 Nov 22 22:00 init_data.xml
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas 912271445 Nov 22 22:04 HITS.47556137._001443.pool.root.1
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas      1065 Nov 22 22:04 memory_monitor_summary.json
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas   1526164 Nov 22 22:04 agis_ddmendpoints.agis.ALL.json
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas   2172006 Nov 22 22:04 log.47556137._001443.job.log.tgz.1
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas      8666 Nov 22 22:04 heartbeat.json
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 22:05 boinc_mmap_file
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas        29 Nov 22 22:05 wrapper_checkpoint.txt
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas        95 Nov 22 22:05 pilot_heartbeat.json
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas      4817 Nov 22 22:05 pilotlog.txt
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas   3534092 Nov 22 22:05 log.47556137._001443.job.log.1
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas       353 Nov 22 22:05 output.list
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas       620 Nov 22 22:05 runtime_log
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas   5724160 Nov 22 22:05 result.tar.gz
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 22:05 runtime_log.err
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas       670 Nov 22 22:05 gtdNDmQAog8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJpHKDmx69mWo.diag
[2025-11-22 22:05:28] -rw-r--r-- 1 boincer umatlas     21509 Nov 22 22:05 stderr.txt
[2025-11-22 22:05:28] HITS file was successfully produced:
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas 912271445 Nov 22 22:04 shared/HITS.pool.root.1
[2025-11-22 22:05:28]  *** Contents of shared directory: ***
[2025-11-22 22:05:28] total 1296064
[2025-11-22 22:05:28] -rw-r--r-- 2 boincer umatlas 408554081 Nov 22 15:03 ATLAS.root_0
[2025-11-22 22:05:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 15:03 start_atlas.sh
[2025-11-22 22:05:28] -rw-r--r-- 2 boincer umatlas    590105 Nov 22 15:03 input.tar.gz
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas 912271445 Nov 22 22:04 HITS.pool.root.1
[2025-11-22 22:05:28] -rw------- 1 boincer umatlas   5724160 Nov 22 22:05 result.tar.gz
22:05:30 (3722): run_atlas exited; CPU time 282745.801534
22:05:30 (3722): called boinc_finish(0)

</stderr_txt>
]]>

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