Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:12:00 (2308275): wrapper (7.7.26015): starting
10:12:00 (2308275): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 10:12:00] Arguments: --nthreads 4
[2025-11-23 10:12:00] Threads: 4
[2025-11-23 10:12:00] Checking for CVMFS
[2025-11-23 10:12:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:12:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:12:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:12:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:12:00] 2.12.7.0 1658315 4054 81872 153202 3 81 3766260 4097024 0 130560 0 1505203 99.978 124262 12902 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-23 10:12:00] CVMFS is ok
[2025-11-23 10:12:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:12:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 10:12:00] Further information can be found at the LHC@home message board.
[2025-11-23 10:12:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:12:00] Checking for apptainer binary...
[2025-11-23 10:12:00] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-23 10:12:00] apptainer is not installed, using version from CVMFS
[2025-11-23 10:12:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:12:00] pckeatlas05
[2025-11-23 10:12:00] apptainer works
[2025-11-23 10:12:00] Set ATHENA_PROC_NUMBER=4
[2025-11-23 10:12:00] Set ATHENA_CORE_NUMBER=4
[2025-11-23 10:12:00] Starting ATLAS job with PandaID=6895331028
[2025-11-23 10:12:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 23:47:49]  *** The last 200 lines of the pilot log: ***
[2025-11-23 23:47:49] 2025-11-23 22:47:15,914 | INFO     | monitor loop #3698: job 0:6895331028 is in state 'finished'
[2025-11-23 23:47:49] 2025-11-23 22:47:15,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:47:49] 2025-11-23 22:47:16,232 | INFO     | time since job start (48911s) is within the limit (172800.0s)
[2025-11-23 23:47:49] 2025-11-23 22:47:16,955 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 23:47:49] 2025-11-23 22:47:16,955 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3729.00175
[2025-11-23 23:47:49] 2025-11-23 22:47:16,956 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6895331028/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 23:47:49] 2025-11-23 22:47:16,956 | INFO     | extracted standard info from prmon json
[2025-11-23 23:47:49] 2025-11-23 22:47:16,956 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 23:47:49] 2025-11-23 22:47:16,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 23:47:49] 2025-11-23 22:47:16,964 | INFO     | fitting pss+swap vs Time
[2025-11-23 23:47:49] 2025-11-23 22:47:16,964 | INFO     | sum of square deviations: 159956117260.5
[2025-11-23 23:47:49] 2025-11-23 22:47:16,972 | INFO     | sum of deviations: 690399810876.4999
[2025-11-23 23:47:49] 2025-11-23 22:47:16,972 | INFO     | mean x: 1763913575.5
[2025-11-23 23:47:49] 2025-11-23 22:47:16,972 | INFO     | mean y: 2383928.0012468826
[2025-11-23 23:47:49] 2025-11-23 22:47:16,972 | INFO     | intersect: -7610989163.22231
[2025-11-23 23:47:49] 2025-11-23 22:47:16,972 | INFO     | chi2: 2.249686036151619
[2025-11-23 23:47:49] 2025-11-23 22:47:16,973 | INFO     | sum of square deviations: 156983028958.0
[2025-11-23 23:47:49] 2025-11-23 22:47:16,981 | INFO     | sum of deviations: 785243351325.0
[2025-11-23 23:47:49] 2025-11-23 22:47:16,981 | INFO     | mean x: 1763913423.0
[2025-11-23 23:47:49] 2025-11-23 22:47:16,981 | INFO     | mean y: 2388781.0464240904
[2025-11-23 23:47:49] 2025-11-23 22:47:16,981 | INFO     | intersect: -8820866171.527138
[2025-11-23 23:47:49] 2025-11-23 22:47:16,981 | INFO     | chi2: 1.35812523175662
[2025-11-23 23:47:49] 2025-11-23 22:47:16,981 | INFO     | current chi2=1.35812523175662 (change=39.630454653135956 %)
[2025-11-23 23:47:49] 2025-11-23 22:47:16,982 | INFO     | sum of square deviations: 154047011118.0
[2025-11-23 23:47:49] 2025-11-23 22:47:16,989 | INFO     | sum of deviations: 774340416285.0
[2025-11-23 23:47:49] 2025-11-23 22:47:16,989 | INFO     | mean x: 1763913270.5
[2025-11-23 23:47:49] 2025-11-23 22:47:16,989 | INFO     | mean y: 2388214.8131313133
[2025-11-23 23:47:49] 2025-11-23 22:47:16,989 | INFO     | intersect: -8864186516.21719
[2025-11-23 23:47:49] 2025-11-23 22:47:16,990 | INFO     | chi2: 1.3575523038391533
[2025-11-23 23:47:49] 2025-11-23 22:47:16,990 | INFO     | current chi2=1.3575523038391533 (change=0.042185205316127246 %)
[2025-11-23 23:47:49] 2025-11-23 22:47:16,990 | INFO     | right removable region: 791
[2025-11-23 23:47:49] 2025-11-23 22:47:16,990 | INFO     | sum of square deviations: 156983028958.0
[2025-11-23 23:47:49] 2025-11-23 22:47:16,998 | INFO     | sum of deviations: 587994728118.0
[2025-11-23 23:47:49] 2025-11-23 22:47:16,998 | INFO     | mean x: 1763913728.0
[2025-11-23 23:47:49] 2025-11-23 22:47:16,998 | INFO     | mean y: 2389165.756587202
[2025-11-23 23:47:49] 2025-11-23 22:47:16,998 | INFO     | intersect: -6604515923.305351
[2025-11-23 23:47:49] 2025-11-23 22:47:16,998 | INFO     | chi2: 1.0778432992647553
[2025-11-23 23:47:49] 2025-11-23 22:47:16,999 | INFO     | current chi2=1.0778432992647553 (change=52.089167913023694 %)
[2025-11-23 23:47:49] 2025-11-23 22:47:16,999 | INFO     | sum of square deviations: 154047011118.0
[2025-11-23 23:47:49] 2025-11-23 22:47:17,006 | INFO     | sum of deviations: 556332714016.4999
[2025-11-23 23:47:49] 2025-11-23 22:47:17,007 | INFO     | mean x: 1763913880.5
[2025-11-23 23:47:49] 2025-11-23 22:47:17,007 | INFO     | mean y: 2390809.7664141413
[2025-11-23 23:47:49] 2025-11-23 22:47:17,007 | INFO     | intersect: -6367891802.7163925
[2025-11-23 23:47:49] 2025-11-23 22:47:17,007 | INFO     | chi2: 1.0510111964437363
[2025-11-23 23:47:49] 2025-11-23 22:47:17,007 | INFO     | current chi2=1.0510111964437363 (change=2.4894252104477865 %)
[2025-11-23 23:47:49] 2025-11-23 22:47:17,007 | INFO     | left removable region: 20
[2025-11-23 23:47:49] 2025-11-23 22:47:17,008 | INFO     | sum of square deviations: 142115297170.0
[2025-11-23 23:47:49] 2025-11-23 22:47:17,015 | INFO     | sum of deviations: 586239460498.9999
[2025-11-23 23:47:49] 2025-11-23 22:47:17,015 | INFO     | mean x: 1763913850.0
[2025-11-23 23:47:49] 2025-11-23 22:47:17,015 | INFO     | mean y: 2398007.431906615
[2025-11-23 23:47:49] 2025-11-23 22:47:17,015 | INFO     | intersect: -7273918648.006952
[2025-11-23 23:47:49] 2025-11-23 22:47:17,016 | INFO     | chi2: 0.12976655065076925
[2025-11-23 23:47:49] 2025-11-23 22:47:17,016 | INFO     | current memory leak: 4.13 B/s (using 771 data points, chi2=0.13)
[2025-11-23 23:47:49] 2025-11-23 22:47:17,016 | INFO     | could have reported an average CPU frequency of 3705 MHz (30 samples)
[2025-11-23 23:47:49] 2025-11-23 22:47:17,016 | INFO     | ..............................
[2025-11-23 23:47:49] 2025-11-23 22:47:17,016 | INFO     | . Timing measurements:
[2025-11-23 23:47:49] 2025-11-23 22:47:17,016 | INFO     | . get job = 0 s
[2025-11-23 23:47:49] 2025-11-23 22:47:17,016 | INFO     | . initial setup = 1 s
[2025-11-23 23:47:49] 2025-11-23 22:47:17,016 | INFO     | . payload setup = 3 s
[2025-11-23 23:47:49] 2025-11-23 22:47:17,016 | INFO     | . stage-in = 0 s
[2025-11-23 23:47:49] 2025-11-23 22:47:17,016 | INFO     | . payload execution = 48886 s
[2025-11-23 23:47:49] 2025-11-23 22:47:17,016 | INFO     | . stage-out = 0 s
[2025-11-23 23:47:49] 2025-11-23 22:47:17,017 | INFO     | . log creation = 0 s
[2025-11-23 23:47:49] 2025-11-23 22:47:17,017 | INFO     | ..............................
[2025-11-23 23:47:49] 2025-11-23 22:47:17,065 | INFO     | 
[2025-11-23 23:47:49] 2025-11-23 22:47:17,065 | INFO     | job summary report
[2025-11-23 23:47:49] 2025-11-23 22:47:17,065 | INFO     | --------------------------------------------------
[2025-11-23 23:47:49] 2025-11-23 22:47:17,065 | INFO     | PanDA job id: 6895331028
[2025-11-23 23:47:49] 2025-11-23 22:47:17,065 | INFO     | task id: 47556137
[2025-11-23 23:47:49] 2025-11-23 22:47:17,065 | INFO     | errors: (none)
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | pilot state: finished 
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | transexitcode: 0
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | exeerrorcode: 0
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | exeerrordiag: 
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | exitcode: 0
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | exitmsg: OK
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | cpuconsumptiontime: 192902 s
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | nevents: 1000
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | neventsw: 0
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | pid: 2319124
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | pgrp: 2319124
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | corecount: 4
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | event service: False
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | sizes: {0: 2298756, 2: 2299018, 11: 2299046, 48893: 2347531, 48895: 2356525, 48896: 2356581, 48899: 2356955}
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | --------------------------------------------------
[2025-11-23 23:47:49] 2025-11-23 22:47:17,066 | INFO     | 
[2025-11-23 23:47:49] 2025-11-23 22:47:17,067 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-23 23:47:49] 2025-11-23 22:47:17,075 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,075 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,075 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,075 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 23:47:49] 2025-11-23 22:47:17,076 | INFO     | job 6895331028 has completed (purged errors)
[2025-11-23 23:47:49] 2025-11-23 22:47:17,077 | INFO     | overall cleanup function is called
[2025-11-23 23:47:49] 2025-11-23 22:47:18,085 | INFO     | --- collectZombieJob: --- 10, [2319124]
[2025-11-23 23:47:49] 2025-11-23 22:47:18,086 | INFO     | zombie collector waiting for pid 2319124
[2025-11-23 23:47:49] 2025-11-23 22:47:18,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 23:47:49] 2025-11-23 22:47:18,086 | INFO     | collected zombie processes
[2025-11-23 23:47:49] 2025-11-23 22:47:18,086 | INFO     | will attempt to kill all subprocesses of pid=2319124
[2025-11-23 23:47:49] 2025-11-23 22:47:18,128 | INFO     | process IDs to be killed: [2319124] (in reverse order)
[2025-11-23 23:47:49] 2025-11-23 22:47:18,147 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 23:47:49] 2025-11-23 22:47:18,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 23:47:49] 2025-11-23 22:47:18,148 | INFO     | did not find any defunct processes belonging to 2319124
[2025-11-23 23:47:49] 2025-11-23 22:47:18,149 | INFO     | did not find any defunct processes belonging to 2319124
[2025-11-23 23:47:49] 2025-11-23 22:47:18,150 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 23:47:49] 2025-11-23 22:47:18,150 | INFO     | ready for new job
[2025-11-23 23:47:49] 2025-11-23 22:47:18,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 23:47:49] 2025-11-23 22:47:18,151 | INFO     | ***************************************
[2025-11-23 23:47:49] 2025-11-23 22:47:18,151 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 23:47:49] 2025-11-23 22:47:18,151 | INFO     | ***************************************
[2025-11-23 23:47:49] 2025-11-23 22:47:18,151 | INFO     | 
[2025-11-23 23:47:49] 2025-11-23 22:47:18,152 | INFO     | architecture information:
[2025-11-23 23:47:49] 2025-11-23 22:47:18,152 | INFO     | executing command: cat /etc/os-release
[2025-11-23 23:47:49] 2025-11-23 22:47:18,158 | INFO     | cat /etc/os-release:
[2025-11-23 23:47:49] NAME="CentOS Linux"
[2025-11-23 23:47:49] VERSION="7 (Core)"
[2025-11-23 23:47:49] ID="centos"
[2025-11-23 23:47:49] ID_LIKE="rhel fedora"
[2025-11-23 23:47:49] VERSION_ID="7"
[2025-11-23 23:47:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 23:47:49] ANSI_COLOR="0;31"
[2025-11-23 23:47:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 23:47:49] HOME_URL="https://www.centos.org/"
[2025-11-23 23:47:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 23:47:49] 
[2025-11-23 23:47:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 23:47:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 23:47:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 23:47:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 23:47:49] 
[2025-11-23 23:47:49] 2025-11-23 22:47:18,158 | INFO     | ***************************************
[2025-11-23 23:47:49] 2025-11-23 22:47:18,661 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-23 23:47:49] 2025-11-23 22:47:18,668 | INFO     | sufficient remaining disk space (45946503168 B)
[2025-11-23 23:47:49] 2025-11-23 22:47:18,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 23:47:49] 2025-11-23 22:47:18,668 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 23:47:49] 2025-11-23 22:47:18,668 | INFO     | update_server=False
[2025-11-23 23:47:49] 2025-11-23 22:47:18,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 23:47:49] 2025-11-23 22:47:18,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 23:47:49] 2025-11-23 22:47:18,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:47:49] 2025-11-23 22:47:19,098 | INFO     | all data control threads have been joined
[2025-11-23 23:47:49] 2025-11-23 22:47:19,235 | INFO     | all job control threads have been joined
[2025-11-23 23:47:49] 2025-11-23 22:47:19,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:47:49] 2025-11-23 22:47:19,423 | INFO     | aborting loop
[2025-11-23 23:47:49] 2025-11-23 22:47:19,671 | INFO     | [job] retrieve thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:19,674 | INFO     | [job] queue monitor thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:19,680 | INFO     | all payload control threads have been joined
[2025-11-23 23:47:49] 2025-11-23 22:47:19,722 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:20,103 | INFO     | [data] control thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:20,240 | INFO     | [job] control thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:20,333 | INFO     | [payload] validate_post thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:20,341 | INFO     | [data] copytool_in thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:20,425 | INFO     | [job] job monitor thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:20,546 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 23:47:49] 2025-11-23 22:47:20,674 | INFO     | [data] copytool_out thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:20,686 | INFO     | [payload] control thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:20,792 | INFO     | [job] validate thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:21,150 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:21,154 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:21,259 | INFO     | [payload] failed_post thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:24,551 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:26,141 | INFO     | [monitor] cgroup control has ended
[2025-11-23 23:47:49] 2025-11-23 22:47:28,722 | INFO     | job.realtimelogging is not enabled
[2025-11-23 23:47:49] 2025-11-23 22:47:29,725 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 23:47:49] 2025-11-23 22:47:30,435 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141096240960)>', '<ExcThread(monitor, started 140140420790016)>']
[2025-11-23 23:47:49] 2025-11-23 22:47:35,457 | INFO     | all workflow threads have been joined
[2025-11-23 23:47:49] 2025-11-23 22:47:35,457 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 23:47:49] 2025-11-23 22:47:35,457 | INFO     | traces error code: 0
[2025-11-23 23:47:49] 2025-11-23 22:47:35,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 23:47:49] 2025-11-23 22:47:49,361 | INFO     | PID=2311938 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 23:47:49] 2025-11-23 22:47:49,362 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 23:47:49] 2025-11-23 22:47:49,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 23:47:49] 2025-11-23 22:47:49,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 23:47:49] 2025-11-23 22:47:49,362 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 23:47:49] 2025-11-23 22:47:49,362 | INFO     | [monitor] control thread has ended
[2025-11-23 23:47:49] 2025-11-23 22:47:49,420 [wrapper] ==== pilot stdout END ====
[2025-11-23 23:47:49] 2025-11-23 22:47:49,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 23:47:49] 2025-11-23 22:47:49,423 [wrapper] pilotpid: 2311938
[2025-11-23 23:47:49] 2025-11-23 22:47:49,424 [wrapper] Pilot exit status: 0
[2025-11-23 23:47:49] 2025-11-23 22:47:49,428 [wrapper] pandaids: 6895331028
[2025-11-23 23:47:49] 2025-11-23 22:47:49,439 [wrapper] cleanup supervisor_pilot 2434277 2311939
[2025-11-23 23:47:49] 2025-11-23 22:47:49,440 [wrapper] Test setup, not cleaning
[2025-11-23 23:47:49] 2025-11-23 22:47:49,441 [wrapper] apfmon messages muted
[2025-11-23 23:47:49] 2025-11-23 22:47:49,442 [wrapper] ==== wrapper stdout END ====
[2025-11-23 23:47:49] 2025-11-23 22:47:49,443 [wrapper] ==== wrapper stderr END ====
[2025-11-23 23:47:49]  *** Error codes and diagnostics ***
[2025-11-23 23:47:49]     "exeErrorCode": 0,
[2025-11-23 23:47:49]     "exeErrorDiag": "",
[2025-11-23 23:47:49]     "pilotErrorCode": 0,
[2025-11-23 23:47:49]     "pilotErrorDiag": "",
[2025-11-23 23:47:49]  *** Listing of results directory ***
[2025-11-23 23:47:49] total 1310132
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc    576529 Nov 21 23:05 pilot3.tar.gz
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc      5112 Nov 21 23:09 queuedata.json
[2025-11-23 23:47:49] -rwx------ 1 boinc boinc     36292 Nov 21 23:10 runpilot2-wrapper.sh
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc       100 Nov 23 10:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 23:47:49] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 10:11 run_atlas
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc       105 Nov 23 10:11 job.xml
[2025-11-23 23:47:49] -rw-r--r-- 2 boinc boinc     15847 Nov 23 10:12 start_atlas.sh
[2025-11-23 23:47:49] drwxrwx--x 2 boinc boinc        68 Nov 23 10:12 shared
[2025-11-23 23:47:49] -rw-r--r-- 2 boinc boinc    590092 Nov 23 10:12 input.tar.gz
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc      6313 Nov 23 10:12 init_data.xml
[2025-11-23 23:47:49] -rw-r--r-- 2 boinc boinc 410641138 Nov 23 10:12 EVNT.47483658._000154.pool.root.1
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc         0 Nov 23 10:12 boinc_lockfile
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc      2785 Nov 23 10:12 pandaJob.out
[2025-11-23 23:47:49] -rw------- 1 boinc boinc    989784 Nov 23 10:12 agis_schedconf.cvmfs.json
[2025-11-23 23:47:49] drwx------ 5 boinc boinc      4096 Nov 23 10:12 pilot3
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc       533 Nov 23 23:42 boinc_task_state.xml
[2025-11-23 23:47:49] -rw------- 1 boinc boinc 910270472 Nov 23 23:46 HITS.47556137._001532.pool.root.1
[2025-11-23 23:47:49] -rw------- 1 boinc boinc      1026 Nov 23 23:47 memory_monitor_summary.json
[2025-11-23 23:47:49] -rw------- 1 boinc boinc   1526164 Nov 23 23:47 agis_ddmendpoints.agis.ALL.json
[2025-11-23 23:47:49] -rw------- 1 boinc boinc   1533759 Nov 23 23:47 log.47556137._001532.job.log.tgz.1
[2025-11-23 23:47:49] -rw------- 1 boinc boinc      8580 Nov 23 23:47 heartbeat.json
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc      8192 Nov 23 23:47 boinc_mmap_file
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc        29 Nov 23 23:47 wrapper_checkpoint.txt
[2025-11-23 23:47:49] -rw------- 1 boinc boinc       747 Nov 23 23:47 pilotlog.txt
[2025-11-23 23:47:49] -rw------- 1 boinc boinc        95 Nov 23 23:47 pilot_heartbeat.json
[2025-11-23 23:47:49] -rw------- 1 boinc boinc   6842712 Nov 23 23:47 log.47556137._001532.job.log.1
[2025-11-23 23:47:49] -rw------- 1 boinc boinc       353 Nov 23 23:47 output.list
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc       620 Nov 23 23:47 runtime_log
[2025-11-23 23:47:49] -rw------- 1 boinc boinc   8396800 Nov 23 23:47 result.tar.gz
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc      8831 Nov 23 23:47 runtime_log.err
[2025-11-23 23:47:49] -rw------- 1 boinc boinc       658 Nov 23 23:47 eGeNDmNWog8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGkJKDmAtgRnn.diag
[2025-11-23 23:47:49] -rw-r--r-- 1 boinc boinc     21332 Nov 23 23:47 stderr.txt
[2025-11-23 23:47:49] HITS file was successfully produced:
[2025-11-23 23:47:49] -rw------- 1 boinc boinc 910270472 Nov 23 23:46 shared/HITS.pool.root.1
[2025-11-23 23:47:49]  *** Contents of shared directory: ***
[2025-11-23 23:47:49] total 1298756
[2025-11-23 23:47:49] -rw-r--r-- 2 boinc boinc     15847 Nov 23 10:12 start_atlas.sh
[2025-11-23 23:47:49] -rw-r--r-- 2 boinc boinc    590092 Nov 23 10:12 input.tar.gz
[2025-11-23 23:47:49] -rw-r--r-- 2 boinc boinc 410641138 Nov 23 10:12 ATLAS.root_0
[2025-11-23 23:47:49] -rw------- 1 boinc boinc 910270472 Nov 23 23:46 HITS.pool.root.1
[2025-11-23 23:47:49] -rw------- 1 boinc boinc   8396800 Nov 23 23:47 result.tar.gz
23:47:50 (2308275): run_atlas exited; CPU time 193081.052902
23:47:50 (2308275): called boinc_finish(0)

</stderr_txt>
]]>

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