Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:39:54 (31754): wrapper (7.7.26015): starting
15:39:54 (31754): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 15:39:54] Arguments: --nthreads 8
[2025-11-22 15:39:54] Threads: 8
[2025-11-22 15:39:54] Checking for CVMFS
[2025-11-22 15:39:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 15:39:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 15:39:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 15:39:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 15:39:56] 2.11.2.0 11495 112432 133144 153184 2 253 10488282 18432000 1859 130560 0 79218770 99.973 4802368 24951 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 15:39:56] CVMFS is ok
[2025-11-22 15:39:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 15:39:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 15:39:56] Further information can be found at the LHC@home message board.
[2025-11-22 15:39:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 15:39:56] Checking for apptainer binary...
[2025-11-22 15:39:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 15:39:56] Running /usr/bin/apptainer --version
[2025-11-22 15:39:57] apptainer version 1.3.2-1.el7
[2025-11-22 15:39:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 15:39:57] c-206-31.aglt2.org
[2025-11-22 15:39:57] apptainer works
[2025-11-22 15:39:57] Set ATHENA_PROC_NUMBER=8
[2025-11-22 15:39:57] Set ATHENA_CORE_NUMBER=8
[2025-11-22 15:39:57] Starting ATLAS job with PandaID=6894290842
[2025-11-22 15:39:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 11:04:13]  *** The last 200 lines of the pilot log: ***
[2025-11-23 11:04:13] 2025-11-23 16:03:05,355 | INFO     | monitor loop #4986: job 0:6894290842 is in state 'finished'
[2025-11-23 11:04:13] 2025-11-23 16:03:05,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 11:04:13] 2025-11-23 16:03:05,861 | INFO     | time since job start (69774s) is within the limit (172800.0s)
[2025-11-23 11:04:13] 2025-11-23 16:03:06,802 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 11:04:13] 2025-11-23 16:03:06,805 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2394.75
[2025-11-23 11:04:13] 2025-11-23 16:03:06,808 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894290842/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 11:04:13] 2025-11-23 16:03:06,808 | INFO     | extracted standard info from prmon json
[2025-11-23 11:04:13] 2025-11-23 16:03:06,809 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 11:04:13] 2025-11-23 16:03:06,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 11:04:13] 2025-11-23 16:03:06,824 | INFO     | fitting pss+swap vs Time
[2025-11-23 11:04:13] 2025-11-23 16:03:06,825 | INFO     | sum of square deviations: 464252138277.99817
[2025-11-23 11:04:13] 2025-11-23 16:03:06,848 | INFO     | sum of deviations: 2085999010740.509
[2025-11-23 11:04:13] 2025-11-23 16:03:06,848 | INFO     | mean x: 1763878900.1145105
[2025-11-23 11:04:13] 2025-11-23 16:03:06,848 | INFO     | mean y: 2862913.812937063
[2025-11-23 11:04:13] 2025-11-23 16:03:06,854 | INFO     | intersect: -7922678698.882103
[2025-11-23 11:04:13] 2025-11-23 16:03:06,860 | INFO     | chi2: 6.064679026550642
[2025-11-23 11:04:13] 2025-11-23 16:03:06,861 | INFO     | sum of square deviations: 458191662311.1027
[2025-11-23 11:04:13] 2025-11-23 16:03:06,908 | INFO     | sum of deviations: 2453070094917.904
[2025-11-23 11:04:13] 2025-11-23 16:03:06,908 | INFO     | mean x: 1763878747.617208
[2025-11-23 11:04:13] 2025-11-23 16:03:06,908 | INFO     | mean y: 2872146.1580333626
[2025-11-23 11:04:13] 2025-11-23 16:03:06,909 | INFO     | intersect: -9440595648.555197
[2025-11-23 11:04:13] 2025-11-23 16:03:06,910 | INFO     | chi2: 3.044581136815827
[2025-11-23 11:04:13] 2025-11-23 16:03:06,910 | INFO     | current chi2=3.044581136815827 (change=49.79814886349445 %)
[2025-11-23 11:04:13] 2025-11-23 16:03:06,912 | INFO     | sum of square deviations: 452184164081.6895
[2025-11-23 11:04:13] 2025-11-23 16:03:06,958 | INFO     | sum of deviations: 2612009663870.8843
[2025-11-23 11:04:13] 2025-11-23 16:03:06,958 | INFO     | mean x: 1763878595.1199296
[2025-11-23 11:04:13] 2025-11-23 16:03:06,958 | INFO     | mean y: 2876178.5229276894
[2025-11-23 11:04:13] 2025-11-23 16:03:06,958 | INFO     | intersect: -10186043076.765116
[2025-11-23 11:04:13] 2025-11-23 16:03:06,960 | INFO     | chi2: 2.366888046601494
[2025-11-23 11:04:13] 2025-11-23 16:03:06,960 | INFO     | current chi2=2.366888046601494 (change=22.258992608851862 %)
[2025-11-23 11:04:13] 2025-11-23 16:03:06,960 | INFO     | right removable region: 1133
[2025-11-23 11:04:13] 2025-11-23 16:03:06,962 | INFO     | sum of square deviations: 458191233481.10254
[2025-11-23 11:04:13] 2025-11-23 16:03:07,006 | INFO     | sum of deviations: 1789943269047.9004
[2025-11-23 11:04:13] 2025-11-23 16:03:07,006 | INFO     | mean x: 1763879052.617208
[2025-11-23 11:04:13] 2025-11-23 16:03:07,007 | INFO     | mean y: 2870354.566286216
[2025-11-23 11:04:13] 2025-11-23 16:03:07,007 | INFO     | intersect: -6887797137.388195
[2025-11-23 11:04:13] 2025-11-23 16:03:07,008 | INFO     | chi2: 4.027449449277009
[2025-11-23 11:04:13] 2025-11-23 16:03:07,009 | INFO     | current chi2=4.027449449277009 (change=33.591713070960836 %)
[2025-11-23 11:04:13] 2025-11-23 16:03:07,010 | INFO     | sum of square deviations: 452183445624.1654
[2025-11-23 11:04:13] 2025-11-23 16:03:07,055 | INFO     | sum of deviations: 1714447067436.3862
[2025-11-23 11:04:13] 2025-11-23 16:03:07,055 | INFO     | mean x: 1763879205.1181657
[2025-11-23 11:04:13] 2025-11-23 16:03:07,056 | INFO     | mean y: 2872270.64638448
[2025-11-23 11:04:13] 2025-11-23 16:03:07,056 | INFO     | intersect: -6684850510.431145
[2025-11-23 11:04:13] 2025-11-23 16:03:07,057 | INFO     | chi2: 3.973692622419875
[2025-11-23 11:04:13] 2025-11-23 16:03:07,058 | INFO     | current chi2=3.973692622419875 (change=1.3347610574425568 %)
[2025-11-23 11:04:13] 2025-11-23 16:03:07,058 | INFO     | left removable region: 20
[2025-11-23 11:04:13] 2025-11-23 16:03:07,059 | INFO     | sum of square deviations: 427524912215.5098
[2025-11-23 11:04:13] 2025-11-23 16:03:07,094 | INFO     | sum of deviations: 2157397684356.8867
[2025-11-23 11:04:13] 2025-11-23 16:03:07,094 | INFO     | mean x: 1763879174.6226416
[2025-11-23 11:04:13] 2025-11-23 16:03:07,094 | INFO     | mean y: 2888625.623539982
[2025-11-23 11:04:13] 2025-11-23 16:03:07,094 | INFO     | intersect: -8898087055.76079
[2025-11-23 11:04:13] 2025-11-23 16:03:07,095 | INFO     | chi2: 0.20659391536311
[2025-11-23 11:04:13] 2025-11-23 16:03:07,095 | INFO     | current memory leak: 5.05 B/s (using 1113 data points, chi2=0.21)
[2025-11-23 11:04:13] 2025-11-23 16:03:07,096 | INFO     | could have reported an average CPU frequency of 2631 MHz (41 samples)
[2025-11-23 11:04:13] 2025-11-23 16:03:07,096 | INFO     | ..............................
[2025-11-23 11:04:13] 2025-11-23 16:03:07,096 | INFO     | . Timing measurements:
[2025-11-23 11:04:13] 2025-11-23 16:03:07,096 | INFO     | . get job = 0 s
[2025-11-23 11:04:13] 2025-11-23 16:03:07,096 | INFO     | . initial setup = 2 s
[2025-11-23 11:04:13] 2025-11-23 16:03:07,096 | INFO     | . payload setup = 5 s
[2025-11-23 11:04:13] 2025-11-23 16:03:07,097 | INFO     | . stage-in = 0 s
[2025-11-23 11:04:13] 2025-11-23 16:03:07,097 | INFO     | . payload execution = 69739 s
[2025-11-23 11:04:13] 2025-11-23 16:03:07,097 | INFO     | . stage-out = 4 s
[2025-11-23 11:04:13] 2025-11-23 16:03:07,097 | INFO     | . log creation = 0 s
[2025-11-23 11:04:13] 2025-11-23 16:03:07,097 | INFO     | ..............................
[2025-11-23 11:04:13] 2025-11-23 16:03:07,205 | INFO     | 
[2025-11-23 11:04:13] 2025-11-23 16:03:07,205 | INFO     | job summary report
[2025-11-23 11:04:13] 2025-11-23 16:03:07,205 | INFO     | --------------------------------------------------
[2025-11-23 11:04:13] 2025-11-23 16:03:07,205 | INFO     | PanDA job id: 6894290842
[2025-11-23 11:04:13] 2025-11-23 16:03:07,205 | INFO     | task id: 47533967
[2025-11-23 11:04:13] 2025-11-23 16:03:07,205 | INFO     | errors: (none)
[2025-11-23 11:04:13] 2025-11-23 16:03:07,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 11:04:13] 2025-11-23 16:03:07,205 | INFO     | pilot state: finished 
[2025-11-23 11:04:13] 2025-11-23 16:03:07,206 | INFO     | transexitcode: 0
[2025-11-23 11:04:13] 2025-11-23 16:03:07,206 | INFO     | exeerrorcode: 0
[2025-11-23 11:04:13] 2025-11-23 16:03:07,206 | INFO     | exeerrordiag: 
[2025-11-23 11:04:13] 2025-11-23 16:03:07,206 | INFO     | exitcode: 0
[2025-11-23 11:04:13] 2025-11-23 16:03:07,206 | INFO     | exitmsg: OK
[2025-11-23 11:04:13] 2025-11-23 16:03:07,207 | INFO     | cpuconsumptiontime: 541524 s
[2025-11-23 11:04:13] 2025-11-23 16:03:07,207 | INFO     | nevents: 1000
[2025-11-23 11:04:13] 2025-11-23 16:03:07,207 | INFO     | neventsw: 0
[2025-11-23 11:04:13] 2025-11-23 16:03:07,207 | INFO     | pid: 10697
[2025-11-23 11:04:13] 2025-11-23 16:03:07,207 | INFO     | pgrp: 10697
[2025-11-23 11:04:13] 2025-11-23 16:03:07,207 | INFO     | corecount: 8
[2025-11-23 11:04:13] 2025-11-23 16:03:07,208 | INFO     | event service: False
[2025-11-23 11:04:13] 2025-11-23 16:03:07,208 | INFO     | sizes: {0: 2298755, 1: 2298783, 6: 2299045, 12: 2299073, 69748: 2355471, 69753: 2364465, 69755: 2364649, 69760: 2364991}
[2025-11-23 11:04:13] 2025-11-23 16:03:07,208 | INFO     | --------------------------------------------------
[2025-11-23 11:04:13] 2025-11-23 16:03:07,208 | INFO     | 
[2025-11-23 11:04:13] 2025-11-23 16:03:07,208 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 11:04:13] 2025-11-23 16:03:07,237 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,238 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,238 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,238 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,238 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,239 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,239 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,239 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,239 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,239 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 11:04:13] 2025-11-23 16:03:07,239 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,240 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 11:04:13] 2025-11-23 16:03:07,240 | INFO     | job 6894290842 has completed (purged errors)
[2025-11-23 11:04:13] 2025-11-23 16:03:07,240 | INFO     | overall cleanup function is called
[2025-11-23 11:04:13] 2025-11-23 16:03:08,252 | INFO     | --- collectZombieJob: --- 10, [10697]
[2025-11-23 11:04:13] 2025-11-23 16:03:08,252 | INFO     | zombie collector waiting for pid 10697
[2025-11-23 11:04:13] 2025-11-23 16:03:08,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 11:04:13] 2025-11-23 16:03:08,252 | INFO     | collected zombie processes
[2025-11-23 11:04:13] 2025-11-23 16:03:08,253 | INFO     | will attempt to kill all subprocesses of pid=10697
[2025-11-23 11:04:13] 2025-11-23 16:03:08,419 | INFO     | process IDs to be killed: [10697] (in reverse order)
[2025-11-23 11:04:13] 2025-11-23 16:03:08,482 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 11:04:13] 2025-11-23 16:03:08,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 11:04:13] 2025-11-23 16:03:08,486 | INFO     | did not find any defunct processes belonging to 10697
[2025-11-23 11:04:13] 2025-11-23 16:03:08,488 | INFO     | did not find any defunct processes belonging to 10697
[2025-11-23 11:04:13] 2025-11-23 16:03:08,489 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 11:04:13] 2025-11-23 16:03:08,489 | INFO     | ready for new job
[2025-11-23 11:04:13] 2025-11-23 16:03:08,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 11:04:13] 2025-11-23 16:03:08,494 | INFO     | ***************************************
[2025-11-23 11:04:13] 2025-11-23 16:03:08,494 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 11:04:13] 2025-11-23 16:03:08,494 | INFO     | ***************************************
[2025-11-23 11:04:13] 2025-11-23 16:03:08,495 | INFO     | 
[2025-11-23 11:04:13] 2025-11-23 16:03:08,496 | INFO     | architecture information:
[2025-11-23 11:04:13] 2025-11-23 16:03:08,496 | INFO     | executing command: cat /etc/os-release
[2025-11-23 11:04:13] 2025-11-23 16:03:08,510 | INFO     | cat /etc/os-release:
[2025-11-23 11:04:13] NAME="CentOS Linux"
[2025-11-23 11:04:13] VERSION="7 (Core)"
[2025-11-23 11:04:13] ID="centos"
[2025-11-23 11:04:13] ID_LIKE="rhel fedora"
[2025-11-23 11:04:13] VERSION_ID="7"
[2025-11-23 11:04:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 11:04:13] ANSI_COLOR="0;31"
[2025-11-23 11:04:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 11:04:13] HOME_URL="https://www.centos.org/"
[2025-11-23 11:04:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 11:04:13] 
[2025-11-23 11:04:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 11:04:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 11:04:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 11:04:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 11:04:13] 
[2025-11-23 11:04:13] 2025-11-23 16:03:08,510 | INFO     | ***************************************
[2025-11-23 11:04:13] 2025-11-23 16:03:09,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 11:04:13] 2025-11-23 16:03:09,031 | INFO     | sufficient remaining disk space (25942818816 B)
[2025-11-23 11:04:13] 2025-11-23 16:03:09,032 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 11:04:13] 2025-11-23 16:03:09,032 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 11:04:13] 2025-11-23 16:03:09,032 | INFO     | update_server=False
[2025-11-23 11:04:13] 2025-11-23 16:03:09,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 11:04:13] 2025-11-23 16:03:09,033 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 11:04:13] 2025-11-23 16:03:09,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:04:13] 2025-11-23 16:03:09,034 | INFO     | aborting loop
[2025-11-23 11:04:13] 2025-11-23 16:03:09,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:04:13] 2025-11-23 16:03:09,229 | INFO     | all payload control threads have been joined
[2025-11-23 11:04:13] 2025-11-23 16:03:09,251 | INFO     | all data control threads have been joined
[2025-11-23 11:04:13] 2025-11-23 16:03:10,038 | INFO     | [job] retrieve thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:10,039 | INFO     | [job] job monitor thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:10,040 | INFO     | [job] queue monitor thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:10,165 | INFO     | all job control threads have been joined
[2025-11-23 11:04:13] 2025-11-23 16:03:10,234 | INFO     | [payload] control thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:10,256 | INFO     | [data] control thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:10,290 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:10,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:10,641 | INFO     | [data] copytool_in thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:10,641 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:10,641 | INFO     | [job] validate thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:10,782 | INFO     | [payload] validate_post thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:10,787 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:11,039 | INFO     | [data] copytool_out thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:11,170 | INFO     | [job] control thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:11,445 | INFO     | [payload] failed_post thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:12,213 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 11:04:13] 2025-11-23 16:03:16,222 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 11:04:13] 2025-11-23 16:03:39,078 | INFO     | PID=3628 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 11:04:13] 2025-11-23 16:03:39,078 | INFO     | .. there are 3 such processes running
[2025-11-23 11:04:13] 2025-11-23 16:03:39,088 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 11:04:13] 2025-11-23 16:03:39,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 11:04:13] 2025-11-23 16:03:39,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 11:04:13] 2025-11-23 16:04:06,924 | INFO     | [monitor] cgroup control has ended
[2025-11-23 11:04:13] 2025-11-23 16:04:07,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139934671558464)>', '<ExcThread(monitor, started 139934245574400)>']
[2025-11-23 11:04:13] 2025-11-23 16:04:08,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 11:04:13] 2025-11-23 16:04:08,237 | INFO     | [monitor] control thread has ended
[2025-11-23 11:04:13] 2025-11-23 16:04:12,955 | INFO     | all workflow threads have been joined
[2025-11-23 11:04:13] 2025-11-23 16:04:12,955 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 11:04:13] 2025-11-23 16:04:12,955 | INFO     | traces error code: 0
[2025-11-23 11:04:13] 2025-11-23 16:04:12,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 11:04:13] 2025-11-23 16:04:13,090 [wrapper] ==== pilot stdout END ====
[2025-11-23 11:04:13] 2025-11-23 16:04:13,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 11:04:13] 2025-11-23 16:04:13,094 [wrapper] pilotpid: 3628
[2025-11-23 11:04:13] 2025-11-23 16:04:13,096 [wrapper] Pilot exit status: 0
[2025-11-23 11:04:13] 2025-11-23 16:04:13,105 [wrapper] pandaids: 6894290842
[2025-11-23 11:04:13] 2025-11-23 16:04:13,146 [wrapper] cleanup supervisor_pilot  8846 3629
[2025-11-23 11:04:13] 2025-11-23 16:04:13,149 [wrapper] Test setup, not cleaning
[2025-11-23 11:04:13] 2025-11-23 16:04:13,151 [wrapper] apfmon messages muted
[2025-11-23 11:04:13] 2025-11-23 16:04:13,153 [wrapper] ==== wrapper stdout END ====
[2025-11-23 11:04:13] 2025-11-23 16:04:13,160 [wrapper] ==== wrapper stderr END ====
[2025-11-23 11:04:13]  *** Error codes and diagnostics ***
[2025-11-23 11:04:13]     "exeErrorCode": 0,
[2025-11-23 11:04:13]     "exeErrorDiag": "",
[2025-11-23 11:04:13]     "pilotErrorCode": 0,
[2025-11-23 11:04:13]     "pilotErrorDiag": "",
[2025-11-23 11:04:13]  *** Listing of results directory ***
[2025-11-23 11:04:13] total 1326884
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 06:49 pilot3.tar.gz
[2025-11-23 11:04:13] -rwx------ 1 boincer umatlas     36292 Nov 21 06:57 runpilot2-wrapper.sh
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 06:57 queuedata.json
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas       100 Nov 22 15:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 11:04:13] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 15:39 run_atlas
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas       105 Nov 22 15:39 job.xml
[2025-11-23 11:04:13] -rw-r--r-- 2 boincer umatlas 411103944 Nov 22 15:39 EVNT.47493127._002433.pool.root.1
[2025-11-23 11:04:13] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 15:39 start_atlas.sh
[2025-11-23 11:04:13] drwxrwx--x 2 boincer umatlas      4096 Nov 22 15:39 shared
[2025-11-23 11:04:13] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 15:39 input.tar.gz
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas         0 Nov 22 15:39 boinc_lockfile
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 15:39 pandaJob.out
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas        57 Nov 22 15:39 setup.sh.local
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas    989768 Nov 22 15:40 agis_schedconf.cvmfs.json
[2025-11-23 11:04:13] drwx------ 5 boincer umatlas      4096 Nov 22 15:40 pilot3
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas       533 Nov 23 10:50 boinc_task_state.xml
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 10:58 init_data.xml
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas 919778376 Nov 23 11:02 HITS.47533967._004049.pool.root.1
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas      1065 Nov 23 11:02 memory_monitor_summary.json
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas   1526164 Nov 23 11:02 agis_ddmendpoints.agis.ALL.json
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas   2311190 Nov 23 11:02 log.47533967._004049.job.log.tgz.1
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas        95 Nov 23 11:03 pilot_heartbeat.json
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas      8675 Nov 23 11:03 heartbeat.json
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 11:03 boinc_mmap_file
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas        29 Nov 23 11:03 wrapper_checkpoint.txt
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas      4820 Nov 23 11:04 pilotlog.txt
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas   9644707 Nov 23 11:04 log.47533967._004049.job.log.1
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas       353 Nov 23 11:04 output.list
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas       620 Nov 23 11:04 runtime_log
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas  11980800 Nov 23 11:04 result.tar.gz
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 11:04 runtime_log.err
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas       668 Nov 23 11:04 5nhNDmdweg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTOJKDmtVaHmn.diag
[2025-11-23 11:04:13] -rw-r--r-- 1 boincer umatlas     21290 Nov 23 11:04 stderr.txt
[2025-11-23 11:04:13] HITS file was successfully produced:
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas 919778376 Nov 23 11:02 shared/HITS.pool.root.1
[2025-11-23 11:04:13]  *** Contents of shared directory: ***
[2025-11-23 11:04:13] total 1312000
[2025-11-23 11:04:13] -rw-r--r-- 2 boincer umatlas 411103944 Nov 22 15:39 ATLAS.root_0
[2025-11-23 11:04:13] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 15:39 start_atlas.sh
[2025-11-23 11:04:13] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 15:39 input.tar.gz
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas 919778376 Nov 23 11:02 HITS.pool.root.1
[2025-11-23 11:04:13] -rw------- 1 boincer umatlas  11980800 Nov 23 11:04 result.tar.gz
11:04:14 (31754): run_atlas exited; CPU time 540752.819431
11:04:14 (31754): called boinc_finish(0)

</stderr_txt>
]]>

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