Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:52:28 (2621810): wrapper (7.7.26015): starting
11:52:28 (2621810): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 11:52:28] Arguments: --nthreads 12
[2025-11-22 11:52:28] Threads: 12
[2025-11-22 11:52:28] Checking for CVMFS
[2025-11-22 11:52:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 11:52:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 11:52:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 11:52:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 11:52:30] 2.11.5.0 1589369 22994 321844 153183 0 440 41158025 45568000 19682 130560 0 233833732 99.803 130036187 27490 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-22 11:52:30] CVMFS is ok
[2025-11-22 11:52:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 11:52:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 11:52:30] Further information can be found at the LHC@home message board.
[2025-11-22 11:52:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 11:52:30] Checking for apptainer binary...
[2025-11-22 11:52:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 11:52:30] Running /usr/bin/apptainer --version
[2025-11-22 11:52:30] apptainer version 1.4.1-1.el9
[2025-11-22 11:52:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 11:52:31] wns0055.triumf.lcg
[2025-11-22 11:52:31] apptainer works
[2025-11-22 11:52:31] Set ATHENA_PROC_NUMBER=12
[2025-11-22 11:52:31] Set ATHENA_CORE_NUMBER=12
[2025-11-22 11:52:31] Starting ATLAS job with PandaID=6895338425
[2025-11-22 11:52:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 12:00:15]  *** The last 200 lines of the pilot log: ***
[2025-11-22 12:00:15] 2025-11-22 19:59:42,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | WARNING  | wrong length of table data, x=[1763841259.0, 1763841320.0, 1763841381.0, 1763841442.0], y=[694.0, 394620.0, 368404.0, 727076.0] (must be same and length>=4)
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | could have reported an average CPU frequency of 2690 MHz (4 samples)
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | ..............................
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | . Timing measurements:
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | . get job = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . initial setup = 4 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . payload setup = 20 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . stage-in = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . payload execution = 212 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . stage-out = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . log creation = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | ..............................
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895338425/pilotlog.txt
[2025-11-22 12:00:15] 2025-11-22 19:59:42,911 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-22 12:00:15] - Log from pilotlog.txt -
[2025-11-22 12:00:15] 2025-11-22 19:59:42,898 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895338425/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 12:00:15] 2025-11-22 19:59:42,899 | INFO     | extracted standard info from prmon json
[2025-11-22 12:00:15] 2025-11-22 19:59:42,899 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 12:00:15] 2025-11-22 19:59:42,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 12:00:15] 2025-11-22 19:59:42,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 12:00:15] 2025-11-22 19:59:42,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | WARNING  | wrong length of table data, x=[1763841259.0, 1763841320.0, 1763841381.0, 1763841442.0], y=[694.0, 394620.0, 368404.0, 727076.0] (must be same and length>=4)
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | could have reported an average CPU frequency of 2690 MHz (4 samples)
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | ..............................
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | . Timing measurements:
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | . get job = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . initial setup = 4 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . payload setup = 20 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . stage-in = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . payload execution = 212 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . stage-out = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . log creation = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | ..............................
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895338425/pilotlog.txt
[2025-11-22 12:00:15] 2025-11-22 19:59:42,911 | WARNING  | 
[2025-11-22 12:00:15] [begin log extracts]
[2025-11-22 12:00:15] - Log from pilotlog.txt -
[2025-11-22 12:00:15] 2025-11-22 19:59:42,898 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895338425/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 12:00:15] 2025-11-22 19:59:42,899 | INFO     | extracted standard info from prmon json
[2025-11-22 12:00:15] 2025-11-22 19:59:42,899 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 12:00:15] 2025-11-22 19:59:42,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 12:00:15] 2025-11-22 19:59:42,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 12:00:15] 2025-11-22 19:59:42,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | WARNING  | wrong length of table data, x=[1763841259.0, 1763841320.0, 1763841381.0, 1763841442.0], y=[694.0, 394620.0, 368404.0, 727076.0] (must be same and length>=4)
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | could have reported an average CPU frequency of 2690 MHz (4 samples)
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | ..............................
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | . Timing measurements:
[2025-11-22 12:00:15] 2025-11-22 19:59:42,900 | INFO     | . get job = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . initial setup = 4 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . payload setup = 20 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . stage-in = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . payload execution = 212 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . stage-out = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | . log creation = 0 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | ..............................
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 12:00:15] 2025-11-22 19:59:42,901 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895338425/pilotlog.txt
[2025-11-22 12:00:15] [end log extracts]
[2025-11-22 12:00:15] 2025-11-22 19:59:42,911 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-22 12:00:15] 2025-11-22 19:59:42,912 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | 
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | job summary report
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | --------------------------------------------------
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | PanDA job id: 6895338425
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | task id: 47556137
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-22 11:57:29,301 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | pilot state: failed 
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | transexitcode: 65
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | exeerrorcode: 65
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | exitcode: 65
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | cpuconsumptiontime: 48 s
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | nevents: 0
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | neventsw: 0
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | pid: 2632671
[2025-11-22 12:00:15] 2025-11-22 19:59:42,968 | INFO     | pgrp: 2632671
[2025-11-22 12:00:15] 2025-11-22 19:59:42,969 | INFO     | corecount: 12
[2025-11-22 12:00:15] 2025-11-22 19:59:42,969 | INFO     | event service: False
[2025-11-22 12:00:15] 2025-11-22 19:59:42,969 | INFO     | sizes: {0: 2298581, 1: 2298780, 12: 2298780, 13: 2299070, 22: 2299126, 236: 2324743, 237: 2329033, 238: 2329061, 362: 2329227}
[2025-11-22 12:00:15] 2025-11-22 19:59:42,969 | INFO     | --------------------------------------------------
[2025-11-22 12:00:15] 2025-11-22 19:59:42,969 | INFO     | 
[2025-11-22 12:00:15] 2025-11-22 19:59:42,969 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-22 12:00:15] 2025-11-22 19:59:43,005 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,006 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 12:00:15] 2025-11-22 19:59:43,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,007 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 12:00:15] 2025-11-22 19:59:43,007 | INFO     | job 6895338425 has completed (purged errors)
[2025-11-22 12:00:15] 2025-11-22 19:59:43,007 | INFO     | overall cleanup function is called
[2025-11-22 12:00:15] 2025-11-22 19:59:44,014 | INFO     | --- collectZombieJob: --- 10, [2632671]
[2025-11-22 12:00:15] 2025-11-22 19:59:44,014 | INFO     | zombie collector waiting for pid 2632671
[2025-11-22 12:00:15] 2025-11-22 19:59:44,014 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 12:00:15] 2025-11-22 19:59:44,015 | INFO     | collected zombie processes
[2025-11-22 12:00:15] 2025-11-22 19:59:44,015 | INFO     | will attempt to kill all subprocesses of pid=2632671
[2025-11-22 12:00:15] 2025-11-22 19:59:44,243 | INFO     | process IDs to be killed: [2632671] (in reverse order)
[2025-11-22 12:00:15] 2025-11-22 19:59:44,334 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 12:00:15] 2025-11-22 19:59:44,335 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 12:00:15] 2025-11-22 19:59:44,353 | INFO     | did not find any defunct processes belonging to 2632671
[2025-11-22 12:00:15] 2025-11-22 19:59:44,370 | INFO     | did not find any defunct processes belonging to 2632671
[2025-11-22 12:00:15] 2025-11-22 19:59:44,373 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 12:00:15] 2025-11-22 19:59:44,373 | INFO     | ready for new job
[2025-11-22 12:00:15] 2025-11-22 19:59:44,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 12:00:15] 2025-11-22 19:59:44,375 | INFO     | ***************************************
[2025-11-22 12:00:15] 2025-11-22 19:59:44,375 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 12:00:15] 2025-11-22 19:59:44,375 | INFO     | ***************************************
[2025-11-22 12:00:15] 2025-11-22 19:59:44,375 | INFO     | 
[2025-11-22 12:00:15] 2025-11-22 19:59:44,377 | INFO     | architecture information:
[2025-11-22 12:00:15] 2025-11-22 19:59:44,380 | INFO     | executing command: cat /etc/os-release
[2025-11-22 12:00:15] 2025-11-22 19:59:44,417 | INFO     | cat /etc/os-release:
[2025-11-22 12:00:15] NAME="CentOS Linux"
[2025-11-22 12:00:15] VERSION="7 (Core)"
[2025-11-22 12:00:15] ID="centos"
[2025-11-22 12:00:15] ID_LIKE="rhel fedora"
[2025-11-22 12:00:15] VERSION_ID="7"
[2025-11-22 12:00:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 12:00:15] ANSI_COLOR="0;31"
[2025-11-22 12:00:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 12:00:15] HOME_URL="https://www.centos.org/"
[2025-11-22 12:00:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 12:00:15] 
[2025-11-22 12:00:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 12:00:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 12:00:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 12:00:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 12:00:15] 
[2025-11-22 12:00:15] 2025-11-22 19:59:44,417 | INFO     | ***************************************
[2025-11-22 12:00:15] 2025-11-22 19:59:44,920 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-22 12:00:15] 2025-11-22 19:59:44,945 | INFO     | sufficient remaining disk space (1616781508608 B)
[2025-11-22 12:00:15] 2025-11-22 19:59:44,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 12:00:15] 2025-11-22 19:59:44,945 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 12:00:15] 2025-11-22 19:59:44,946 | INFO     | update_server=False
[2025-11-22 12:00:15] 2025-11-22 19:59:44,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 12:00:15] 2025-11-22 19:59:44,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 12:00:15] 2025-11-22 19:59:44,946 | INFO     | aborting loop
[2025-11-22 12:00:15] 2025-11-22 19:59:44,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 12:00:15] 2025-11-22 19:59:45,792 | INFO     | all data control threads have been joined
[2025-11-22 12:00:15] 2025-11-22 19:59:45,796 | INFO     | all payload control threads have been joined
[2025-11-22 12:00:15] 2025-11-22 19:59:45,951 | INFO     | all job control threads have been joined
[2025-11-22 12:00:15] 2025-11-22 19:59:45,951 | INFO     | [job] queue monitor thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:45,952 | INFO     | [job] retrieve thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:45,952 | INFO     | [job] job monitor thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:46,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:46,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 12:00:15] 2025-11-22 19:59:46,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 12:00:15] 2025-11-22 19:59:46,432 | INFO     | [job] validate thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:46,515 | INFO     | [payload] failed_post thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:46,565 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:46,620 | INFO     | [payload] validate_post thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:46,744 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:46,798 | INFO     | [data] control thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:46,800 | INFO     | [payload] control thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:46,957 | INFO     | [job] control thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:47,080 | INFO     | [data] copytool_in thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:47,409 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:48,390 | INFO     | [data] copytool_out thread has finished
[2025-11-22 12:00:15] 2025-11-22 19:59:50,407 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 12:00:15] 2025-11-22 20:00:06,136 | INFO     | [monitor] cgroup control has ended
[2025-11-22 12:00:15] 2025-11-22 20:00:07,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771131496256)>', '<ExcThread(monitor, started 139770382513920)>']
[2025-11-22 12:00:15] 2025-11-22 20:00:12,870 | INFO     | all workflow threads have been joined
[2025-11-22 12:00:15] 2025-11-22 20:00:12,870 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 12:00:15] 2025-11-22 20:00:12,871 | INFO     | traces error code: 0
[2025-11-22 12:00:15] 2025-11-22 20:00:12,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 12:00:15] 2025-11-22 20:00:14,681 | INFO     | PID=2625778 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 12:00:15] 2025-11-22 20:00:14,682 | INFO     | .. there are 35 such processes running
[2025-11-22 12:00:15] 2025-11-22 20:00:14,683 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 12:00:15] 2025-11-22 20:00:14,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 12:00:15] 2025-11-22 20:00:14,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 12:00:15] 2025-11-22 20:00:14,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 12:00:15] 2025-11-22 20:00:14,683 | INFO     | [monitor] control thread has ended
[2025-11-22 12:00:15] 2025-11-22 20:00:14,868 [wrapper] ==== pilot stdout END ====
[2025-11-22 12:00:15] 2025-11-22 20:00:14,870 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 12:00:15] 2025-11-22 20:00:14,876 [wrapper] pilotpid: 2625778
[2025-11-22 12:00:15] 2025-11-22 20:00:14,878 [wrapper] Pilot exit status: 0
[2025-11-22 12:00:15] 2025-11-22 20:00:14,889 [wrapper] pandaids: 6895338425
[2025-11-22 12:00:15] 2025-11-22 20:00:14,943 [wrapper] cleanup supervisor_pilot 2625784 2625779
[2025-11-22 12:00:15] 2025-11-22 20:00:14,951 [wrapper] Test setup, not cleaning
[2025-11-22 12:00:15] 2025-11-22 20:00:14,954 [wrapper] apfmon messages muted
[2025-11-22 12:00:15] 2025-11-22 20:00:14,957 [wrapper] ==== wrapper stdout END ====
[2025-11-22 12:00:15] 2025-11-22 20:00:14,958 [wrapper] ==== wrapper stderr END ====
[2025-11-22 12:00:15]  *** Error codes and diagnostics ***
[2025-11-22 12:00:15]     "exeErrorCode": 65,
[2025-11-22 12:00:15]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-22 12:00:15]     "pilotErrorCode": 1305,
[2025-11-22 12:00:15]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-22 12:00:15]  *** Listing of results directory ***
[2025-11-22 12:00:15] total 406480
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc    576529 Nov 22 00:43 pilot3.tar.gz
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc      5112 Nov 22 00:51 queuedata.json
[2025-11-22 12:00:15] -rwx------. 1 boinc boinc     36292 Nov 22 00:51 runpilot2-wrapper.sh
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc       100 Nov 22 11:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 12:00:15] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 11:52 run_atlas
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc       105 Nov 22 11:52 job.xml
[2025-11-22 12:00:15] -rw-r--r--. 2 boinc boinc 411976161 Nov 22 11:52 EVNT.47483658._000323.pool.root.1
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc      6594 Nov 22 11:52 init_data.xml
[2025-11-22 12:00:15] -rw-r--r--. 2 boinc boinc     15847 Nov 22 11:52 start_atlas.sh
[2025-11-22 12:00:15] drwxrwx--x. 2 boinc boinc      4096 Nov 22 11:52 shared
[2025-11-22 12:00:15] -rw-r--r--. 2 boinc boinc    590093 Nov 22 11:52 input.tar.gz
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc         0 Nov 22 11:52 boinc_lockfile
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc      2784 Nov 22 11:52 pandaJob.out
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc    989768 Nov 22 11:53 agis_schedconf.cvmfs.json
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc   1526164 Nov 22 11:53 agis_ddmendpoints.agis.ALL.json
[2025-11-22 12:00:15] drwx------. 5 boinc boinc      4096 Nov 22 11:53 pilot3
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc       524 Nov 22 11:57 boinc_task_state.xml
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc      1015 Nov 22 11:57 memory_monitor_summary.json
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc     51400 Nov 22 11:57 log.47556137._003200.job.log.tgz.1
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc     10342 Nov 22 11:59 heartbeat.json
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc        23 Nov 22 12:00 wrapper_checkpoint.txt
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc      8192 Nov 22 12:00 boinc_mmap_file
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc       823 Nov 22 12:00 pilotlog.txt
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc        95 Nov 22 12:00 pilot_heartbeat.json
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc    116514 Nov 22 12:00 log.47556137._003200.job.log.1
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc       186 Nov 22 12:00 output.list
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc       620 Nov 22 12:00 runtime_log
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc    194560 Nov 22 12:00 result.tar.gz
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc      8636 Nov 22 12:00 runtime_log.err
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc       647 Nov 22 12:00 2OHKDmaWyg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDml2HKDm4FgV3n.diag
[2025-11-22 12:00:15] -rw-r--r--. 1 boinc boinc     22642 Nov 22 12:00 stderr.txt
[2025-11-22 12:00:15] No HITS result produced
[2025-11-22 12:00:15]  *** Contents of shared directory: ***
[2025-11-22 12:00:15] total 403116
[2025-11-22 12:00:15] -rw-r--r--. 2 boinc boinc 411976161 Nov 22 11:52 ATLAS.root_0
[2025-11-22 12:00:15] -rw-r--r--. 2 boinc boinc     15847 Nov 22 11:52 start_atlas.sh
[2025-11-22 12:00:15] -rw-r--r--. 2 boinc boinc    590093 Nov 22 11:52 input.tar.gz
[2025-11-22 12:00:15] -rw-------. 1 boinc boinc    194560 Nov 22 12:00 result.tar.gz
12:00:16 (2621810): run_atlas exited; CPU time 51.815110
12:00:16 (2621810): called boinc_finish(0)

</stderr_txt>
]]>

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