Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:50:23 (26164): wrapper (7.7.26015): starting
14:50:23 (26164): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 14:50:23] Arguments: --nthreads 12
[2025-11-22 14:50:23] Threads: 12
[2025-11-22 14:50:23] Checking for CVMFS
[2025-11-22 14:50:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 14:50:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 14:50:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 14:50:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 14:50:23] 2.11.2.0 2979 282378 90740 153183 3 82 10400918 20275200 1 130560 1 126405205 99.974 15853290 13766 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 14:50:23] CVMFS is ok
[2025-11-22 14:50:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 14:50:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 14:50:23] Further information can be found at the LHC@home message board.
[2025-11-22 14:50:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 14:50:23] Checking for apptainer binary...
[2025-11-22 14:50:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 14:50:23] Running /usr/bin/apptainer --version
[2025-11-22 14:50:23] apptainer version 1.3.2-1.el7
[2025-11-22 14:50:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 14:50:25] c-205-21.aglt2.org
[2025-11-22 14:50:25] apptainer works
[2025-11-22 14:50:25] Set ATHENA_PROC_NUMBER=12
[2025-11-22 14:50:25] Set ATHENA_CORE_NUMBER=12
[2025-11-22 14:50:25] Starting ATLAS job with PandaID=6894290542
[2025-11-22 14:50:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 21:57:28]  *** The last 200 lines of the pilot log: ***
[2025-11-22 21:57:28] 2025-11-23 02:56:23,108 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 21:57:28] 2025-11-23 02:56:23,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 21:57:28] 2025-11-23 02:56:23,116 | INFO     | fitting pss+swap vs Time
[2025-11-22 21:57:28] 2025-11-23 02:56:23,116 | INFO     | sum of square deviations: 22809541580.09536
[2025-11-22 21:57:28] 2025-11-23 02:56:23,120 | INFO     | sum of deviations: 301113329802.1263
[2025-11-22 21:57:28] 2025-11-23 02:56:23,120 | INFO     | mean x: 1763853819.2124104
[2025-11-22 21:57:28] 2025-11-23 02:56:23,120 | INFO     | mean y: 3399708.706443914
[2025-11-22 21:57:28] 2025-11-23 02:56:23,120 | INFO     | intersect: -23281588063.723225
[2025-11-22 21:57:28] 2025-11-23 02:56:23,121 | INFO     | chi2: 7.019055308082773
[2025-11-22 21:57:28] 2025-11-23 02:56:23,122 | INFO     | sum of square deviations: 22002697782.3673
[2025-11-22 21:57:28] 2025-11-23 02:56:23,125 | INFO     | sum of deviations: 466165648699.6229
[2025-11-22 21:57:28] 2025-11-23 02:56:23,125 | INFO     | mean x: 1763853666.7149758
[2025-11-22 21:57:28] 2025-11-23 02:56:23,125 | INFO     | mean y: 3430874.8188405796
[2025-11-22 21:57:28] 2025-11-23 02:56:23,126 | INFO     | intersect: -37366895113.766754
[2025-11-22 21:57:28] 2025-11-23 02:56:23,126 | INFO     | chi2: 3.7700261684951952
[2025-11-22 21:57:28] 2025-11-23 02:56:23,126 | INFO     | current chi2=3.7700261684951952 (change=46.288695514995695 %)
[2025-11-22 21:57:28] 2025-11-23 02:56:23,127 | INFO     | sum of square deviations: 21215110159.633286
[2025-11-22 21:57:28] 2025-11-23 02:56:23,130 | INFO     | sum of deviations: 552613444099.9333
[2025-11-22 21:57:28] 2025-11-23 02:56:23,130 | INFO     | mean x: 1763853514.217604
[2025-11-22 21:57:28] 2025-11-23 02:56:23,130 | INFO     | mean y: 3447587.259168704
[2025-11-22 21:57:28] 2025-11-23 02:56:23,131 | INFO     | intersect: -45941596206.77266
[2025-11-22 21:57:28] 2025-11-23 02:56:23,131 | INFO     | chi2: 2.73438796106314
[2025-11-22 21:57:28] 2025-11-23 02:56:23,131 | INFO     | current chi2=2.73438796106314 (change=27.470318802732073 %)
[2025-11-22 21:57:28] 2025-11-23 02:56:23,132 | INFO     | sum of square deviations: 20446546149.39351
[2025-11-22 21:57:28] 2025-11-23 02:56:23,135 | INFO     | sum of deviations: 563126790654.554
[2025-11-22 21:57:28] 2025-11-23 02:56:23,135 | INFO     | mean x: 1763853361.720297
[2025-11-22 21:57:28] 2025-11-23 02:56:23,135 | INFO     | mean y: 3449641.712871287
[2025-11-22 21:57:28] 2025-11-23 02:56:23,135 | INFO     | intersect: -48575565880.68428
[2025-11-22 21:57:28] 2025-11-23 02:56:23,136 | INFO     | chi2: 2.6044714280377796
[2025-11-22 21:57:28] 2025-11-23 02:56:23,136 | INFO     | current chi2=2.6044714280377796 (change=4.751210686827644 %)
[2025-11-22 21:57:28] 2025-11-23 02:56:23,136 | INFO     | right removable region: 403
[2025-11-22 21:57:28] 2025-11-23 02:56:23,137 | INFO     | sum of square deviations: 22002643492.36731
[2025-11-22 21:57:28] 2025-11-23 02:56:23,140 | INFO     | sum of deviations: 158715770946.9177
[2025-11-22 21:57:28] 2025-11-23 02:56:23,140 | INFO     | mean x: 1763853971.7149758
[2025-11-22 21:57:28] 2025-11-23 02:56:23,140 | INFO     | mean y: 3426545.7874396136
[2025-11-22 21:57:28] 2025-11-23 02:56:23,141 | INFO     | intersect: -12720110199.042334
[2025-11-22 21:57:28] 2025-11-23 02:56:23,141 | INFO     | chi2: 4.5823614797893155
[2025-11-22 21:57:28] 2025-11-23 02:56:23,141 | INFO     | current chi2=4.5823614797893155 (change=34.71540999951218 %)
[2025-11-22 21:57:28] 2025-11-23 02:56:23,142 | INFO     | sum of square deviations: 21215051720.493927
[2025-11-22 21:57:28] 2025-11-23 02:56:23,145 | INFO     | sum of deviations: 127094099626.90479
[2025-11-22 21:57:28] 2025-11-23 02:56:23,145 | INFO     | mean x: 1763854124.212714
[2025-11-22 21:57:28] 2025-11-23 02:56:23,145 | INFO     | mean y: 3432662.518337408
[2025-11-22 21:57:28] 2025-11-23 02:56:23,146 | INFO     | intersect: -10563378804.335741
[2025-11-22 21:57:28] 2025-11-23 02:56:23,146 | INFO     | chi2: 4.52479699031071
[2025-11-22 21:57:28] 2025-11-23 02:56:23,146 | INFO     | current chi2=4.52479699031071 (change=1.256218867335015 %)
[2025-11-22 21:57:28] 2025-11-23 02:56:23,146 | INFO     | left removable region: 20
[2025-11-22 21:57:28] 2025-11-23 02:56:23,147 | INFO     | sum of square deviations: 17420922965.576897
[2025-11-22 21:57:28] 2025-11-23 02:56:23,150 | INFO     | sum of deviations: 349729220445.2687
[2025-11-22 21:57:28] 2025-11-23 02:56:23,150 | INFO     | mean x: 1763853941.2193213
[2025-11-22 21:57:28] 2025-11-23 02:56:23,150 | INFO     | mean y: 3492767.3420365537
[2025-11-22 21:57:28] 2025-11-23 02:56:23,150 | INFO     | intersect: -35406299530.16499
[2025-11-22 21:57:28] 2025-11-23 02:56:23,151 | INFO     | chi2: 0.05451075329489887
[2025-11-22 21:57:28] 2025-11-23 02:56:23,151 | INFO     | current memory leak: 20.08 B/s (using 383 data points, chi2=0.05)
[2025-11-22 21:57:28] 2025-11-23 02:56:23,151 | INFO     | could have reported an average CPU frequency of 2357 MHz (18 samples)
[2025-11-22 21:57:28] 2025-11-23 02:56:23,151 | INFO     | ..............................
[2025-11-22 21:57:28] 2025-11-23 02:56:23,152 | INFO     | . Timing measurements:
[2025-11-22 21:57:28] 2025-11-23 02:56:23,152 | INFO     | . get job = 0 s
[2025-11-22 21:57:28] 2025-11-23 02:56:23,152 | INFO     | . initial setup = 2 s
[2025-11-22 21:57:28] 2025-11-23 02:56:23,152 | INFO     | . payload setup = 7 s
[2025-11-22 21:57:28] 2025-11-23 02:56:23,152 | INFO     | . stage-in = 0 s
[2025-11-22 21:57:28] 2025-11-23 02:56:23,152 | INFO     | . payload execution = 25507 s
[2025-11-22 21:57:28] 2025-11-23 02:56:23,152 | INFO     | . stage-out = 3 s
[2025-11-22 21:57:28] 2025-11-23 02:56:23,152 | INFO     | . log creation = 0 s
[2025-11-22 21:57:28] 2025-11-23 02:56:23,153 | INFO     | ..............................
[2025-11-22 21:57:28] 2025-11-23 02:56:23,234 | INFO     | 
[2025-11-22 21:57:28] 2025-11-23 02:56:23,234 | INFO     | job summary report
[2025-11-22 21:57:28] 2025-11-23 02:56:23,234 | INFO     | --------------------------------------------------
[2025-11-22 21:57:28] 2025-11-23 02:56:23,234 | INFO     | PanDA job id: 6894290542
[2025-11-22 21:57:28] 2025-11-23 02:56:23,235 | INFO     | task id: 47533967
[2025-11-22 21:57:28] 2025-11-23 02:56:23,235 | INFO     | errors: (none)
[2025-11-22 21:57:28] 2025-11-23 02:56:23,235 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 21:57:28] 2025-11-23 02:56:23,235 | INFO     | pilot state: finished 
[2025-11-22 21:57:28] 2025-11-23 02:56:23,235 | INFO     | transexitcode: 0
[2025-11-22 21:57:28] 2025-11-23 02:56:23,235 | INFO     | exeerrorcode: 0
[2025-11-22 21:57:28] 2025-11-23 02:56:23,236 | INFO     | exeerrordiag: 
[2025-11-22 21:57:28] 2025-11-23 02:56:23,236 | INFO     | exitcode: 0
[2025-11-22 21:57:28] 2025-11-23 02:56:23,236 | INFO     | exitmsg: OK
[2025-11-22 21:57:28] 2025-11-23 02:56:23,236 | INFO     | cpuconsumptiontime: 291246 s
[2025-11-22 21:57:28] 2025-11-23 02:56:23,236 | INFO     | nevents: 1000
[2025-11-22 21:57:28] 2025-11-23 02:56:23,236 | INFO     | neventsw: 0
[2025-11-22 21:57:28] 2025-11-23 02:56:23,236 | INFO     | pid: 4100
[2025-11-22 21:57:28] 2025-11-23 02:56:23,237 | INFO     | pgrp: 4100
[2025-11-22 21:57:28] 2025-11-23 02:56:23,237 | INFO     | corecount: 12
[2025-11-22 21:57:28] 2025-11-23 02:56:23,237 | INFO     | event service: False
[2025-11-22 21:57:28] 2025-11-23 02:56:23,237 | INFO     | sizes: {0: 2298756, 5: 2299018, 11: 2299074, 25515: 2336226, 25519: 2345276, 25526: 2345466}
[2025-11-22 21:57:28] 2025-11-23 02:56:23,237 | INFO     | --------------------------------------------------
[2025-11-22 21:57:28] 2025-11-23 02:56:23,237 | INFO     | 
[2025-11-22 21:57:28] 2025-11-23 02:56:23,238 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 21:57:28] 2025-11-23 02:56:23,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,266 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 21:57:28] 2025-11-23 02:56:23,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,266 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 21:57:28] 2025-11-23 02:56:23,266 | INFO     | job 6894290542 has completed (purged errors)
[2025-11-22 21:57:28] 2025-11-23 02:56:23,266 | INFO     | overall cleanup function is called
[2025-11-22 21:57:28] 2025-11-23 02:56:24,282 | INFO     | --- collectZombieJob: --- 10, [4100]
[2025-11-22 21:57:28] 2025-11-23 02:56:24,282 | INFO     | zombie collector waiting for pid 4100
[2025-11-22 21:57:28] 2025-11-23 02:56:24,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 21:57:28] 2025-11-23 02:56:24,283 | INFO     | collected zombie processes
[2025-11-22 21:57:28] 2025-11-23 02:56:24,283 | INFO     | will attempt to kill all subprocesses of pid=4100
[2025-11-22 21:57:28] 2025-11-23 02:56:24,374 | INFO     | process IDs to be killed: [4100] (in reverse order)
[2025-11-22 21:57:28] 2025-11-23 02:56:24,425 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 21:57:28] 2025-11-23 02:56:24,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 21:57:28] 2025-11-23 02:56:24,429 | INFO     | did not find any defunct processes belonging to 4100
[2025-11-22 21:57:28] 2025-11-23 02:56:24,432 | INFO     | did not find any defunct processes belonging to 4100
[2025-11-22 21:57:28] 2025-11-23 02:56:24,434 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 21:57:28] 2025-11-23 02:56:24,434 | INFO     | ready for new job
[2025-11-22 21:57:28] 2025-11-23 02:56:24,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 21:57:28] 2025-11-23 02:56:24,436 | INFO     | ***************************************
[2025-11-22 21:57:28] 2025-11-23 02:56:24,436 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 21:57:28] 2025-11-23 02:56:24,437 | INFO     | ***************************************
[2025-11-22 21:57:28] 2025-11-23 02:56:24,437 | INFO     | 
[2025-11-22 21:57:28] 2025-11-23 02:56:24,437 | INFO     | architecture information:
[2025-11-22 21:57:28] 2025-11-23 02:56:24,438 | INFO     | executing command: cat /etc/os-release
[2025-11-22 21:57:28] 2025-11-23 02:56:24,454 | INFO     | cat /etc/os-release:
[2025-11-22 21:57:28] NAME="CentOS Linux"
[2025-11-22 21:57:28] VERSION="7 (Core)"
[2025-11-22 21:57:28] ID="centos"
[2025-11-22 21:57:28] ID_LIKE="rhel fedora"
[2025-11-22 21:57:28] VERSION_ID="7"
[2025-11-22 21:57:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 21:57:28] ANSI_COLOR="0;31"
[2025-11-22 21:57:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 21:57:28] HOME_URL="https://www.centos.org/"
[2025-11-22 21:57:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 21:57:28] 
[2025-11-22 21:57:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 21:57:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 21:57:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 21:57:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 21:57:28] 
[2025-11-22 21:57:28] 2025-11-23 02:56:24,454 | INFO     | ***************************************
[2025-11-22 21:57:28] 2025-11-23 02:56:24,957 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 21:57:28] 2025-11-23 02:56:24,974 | INFO     | sufficient remaining disk space (28243394560 B)
[2025-11-22 21:57:28] 2025-11-23 02:56:24,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 21:57:28] 2025-11-23 02:56:24,975 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 21:57:28] 2025-11-23 02:56:24,975 | INFO     | update_server=False
[2025-11-22 21:57:28] 2025-11-23 02:56:24,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 21:57:28] 2025-11-23 02:56:24,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:57:28] 2025-11-23 02:56:24,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:57:28] 2025-11-23 02:56:24,976 | INFO     | aborting loop
[2025-11-22 21:57:28] 2025-11-23 02:56:25,172 | INFO     | all data control threads have been joined
[2025-11-22 21:57:28] 2025-11-23 02:56:25,981 | INFO     | [job] retrieve thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:25,982 | INFO     | [job] queue monitor thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:25,982 | INFO     | [job] job monitor thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:26,015 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 21:57:28] 2025-11-23 02:56:26,178 | INFO     | all job control threads have been joined
[2025-11-22 21:57:28] 2025-11-23 02:56:26,178 | INFO     | [data] control thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:26,297 | INFO     | [job] validate thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:26,474 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:26,479 | INFO     | all payload control threads have been joined
[2025-11-22 21:57:28] 2025-11-23 02:56:26,629 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:26,720 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:26,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 21:57:28] 2025-11-23 02:56:27,021 | INFO     | [payload] failed_post thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:27,183 | INFO     | [job] control thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:27,185 | INFO     | [data] copytool_in thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:27,463 | INFO     | [payload] validate_post thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:27,483 | INFO     | [payload] control thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:28,020 | INFO     | [data] copytool_out thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:30,797 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:35,196 | INFO     | job.realtimelogging is not enabled
[2025-11-22 21:57:28] 2025-11-23 02:56:36,202 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 21:57:28] 2025-11-23 02:56:55,775 | INFO     | PID=29923 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 21:57:28] 2025-11-23 02:56:55,775 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 21:57:28] 2025-11-23 02:56:55,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 21:57:28] 2025-11-23 02:56:55,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 21:57:28] 2025-11-23 02:57:21,693 | INFO     | [monitor] cgroup control has ended
[2025-11-22 21:57:28] 2025-11-23 02:57:23,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081234282304)>', '<ExcThread(monitor, started 140080316393216)>']
[2025-11-22 21:57:28] 2025-11-23 02:57:23,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 21:57:28] 2025-11-23 02:57:23,908 | INFO     | [monitor] control thread has ended
[2025-11-22 21:57:28] 2025-11-23 02:57:28,127 | INFO     | all workflow threads have been joined
[2025-11-22 21:57:28] 2025-11-23 02:57:28,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 21:57:28] 2025-11-23 02:57:28,128 | INFO     | traces error code: 0
[2025-11-22 21:57:28] 2025-11-23 02:57:28,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 21:57:28] 2025-11-23 02:57:28,217 [wrapper] ==== pilot stdout END ====
[2025-11-22 21:57:28] 2025-11-23 02:57:28,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 21:57:28] 2025-11-23 02:57:28,226 [wrapper] pilotpid: 29923
[2025-11-22 21:57:28] 2025-11-23 02:57:28,230 [wrapper] Pilot exit status: 0
[2025-11-22 21:57:28] 2025-11-23 02:57:28,245 [wrapper] pandaids: 6894290542
[2025-11-22 21:57:28] 2025-11-23 02:57:28,293 [wrapper] cleanup supervisor_pilot 13468 29924
[2025-11-22 21:57:28] 2025-11-23 02:57:28,297 [wrapper] Test setup, not cleaning
[2025-11-22 21:57:28] 2025-11-23 02:57:28,302 [wrapper] apfmon messages muted
[2025-11-22 21:57:28] 2025-11-23 02:57:28,306 [wrapper] ==== wrapper stdout END ====
[2025-11-22 21:57:28] 2025-11-23 02:57:28,310 [wrapper] ==== wrapper stderr END ====
[2025-11-22 21:57:28]  *** Error codes and diagnostics ***
[2025-11-22 21:57:28]     "exeErrorCode": 0,
[2025-11-22 21:57:28]     "exeErrorDiag": "",
[2025-11-22 21:57:28]     "pilotErrorCode": 0,
[2025-11-22 21:57:28]     "pilotErrorDiag": "",
[2025-11-22 21:57:28]  *** Listing of results directory ***
[2025-11-22 21:57:28] total 1309732
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 06:32 pilot3.tar.gz
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 06:46 queuedata.json
[2025-11-22 21:57:28] -rwx------ 1 boincer umatlas     36292 Nov 21 06:46 runpilot2-wrapper.sh
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas       100 Nov 22 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 21:57:28] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 14:50 run_atlas
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas       105 Nov 22 14:50 job.xml
[2025-11-22 21:57:28] -rw-r--r-- 2 boincer umatlas 411021507 Nov 22 14:50 EVNT.47493127._002423.pool.root.1
[2025-11-22 21:57:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 14:50 start_atlas.sh
[2025-11-22 21:57:28] drwxrwx--x 2 boincer umatlas      4096 Nov 22 14:50 shared
[2025-11-22 21:57:28] -rw-r--r-- 2 boincer umatlas    590109 Nov 22 14:50 input.tar.gz
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas         0 Nov 22 14:50 boinc_lockfile
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 14:50 pandaJob.out
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas        57 Nov 22 14:50 setup.sh.local
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas    989768 Nov 22 14:50 agis_schedconf.cvmfs.json
[2025-11-22 21:57:28] drwx------ 5 boincer umatlas      4096 Nov 22 14:50 pilot3
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas       532 Nov 22 21:43 boinc_task_state.xml
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas 914702202 Nov 22 21:55 HITS.47533967._003950.pool.root.1
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas      1064 Nov 22 21:56 memory_monitor_summary.json
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas   1526164 Nov 22 21:56 agis_ddmendpoints.agis.ALL.json
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas   2183619 Nov 22 21:56 log.47533967._003950.job.log.tgz.1
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas      8666 Nov 22 21:56 heartbeat.json
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas        95 Nov 22 21:56 pilot_heartbeat.json
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas      5956 Nov 22 21:57 init_data.xml
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 21:57 boinc_mmap_file
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas        29 Nov 22 21:57 wrapper_checkpoint.txt
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas      4818 Nov 22 21:57 pilotlog.txt
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas   3573138 Nov 22 21:57 log.47533967._003950.job.log.1
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas       353 Nov 22 21:57 output.list
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas       620 Nov 22 21:57 runtime_log
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas   5775360 Nov 22 21:57 result.tar.gz
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 21:57 runtime_log.err
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas       670 Nov 22 21:57 5J1LDmvleg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpNJKDmX7EpSm.diag
[2025-11-22 21:57:28] -rw-r--r-- 1 boincer umatlas     21058 Nov 22 21:57 stderr.txt
[2025-11-22 21:57:28] HITS file was successfully produced:
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas 914702202 Nov 22 21:55 shared/HITS.pool.root.1
[2025-11-22 21:57:28]  *** Contents of shared directory: ***
[2025-11-22 21:57:28] total 1300900
[2025-11-22 21:57:28] -rw-r--r-- 2 boincer umatlas 411021507 Nov 22 14:50 ATLAS.root_0
[2025-11-22 21:57:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 14:50 start_atlas.sh
[2025-11-22 21:57:28] -rw-r--r-- 2 boincer umatlas    590109 Nov 22 14:50 input.tar.gz
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas 914702202 Nov 22 21:55 HITS.pool.root.1
[2025-11-22 21:57:28] -rw------- 1 boincer umatlas   5775360 Nov 22 21:57 result.tar.gz
21:57:29 (26164): run_atlas exited; CPU time 284674.480624
21:57:29 (26164): called boinc_finish(0)

</stderr_txt>
]]>

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