Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:10:15 (19060): wrapper (7.7.26015): starting
15:10:15 (19060): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 15:10:15] Arguments: --nthreads 8
[2025-11-22 15:10:15] Threads: 8
[2025-11-22 15:10:15] Checking for CVMFS
[2025-11-22 15:10:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 15:10:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 15:10:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 15:10:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 15:10:15] 2.11.2.0 2878 52199 79624 153183 3 82 11444725 20275201 1 130560 0 10298185 99.762 3222855 30795 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 15:10:15] CVMFS is ok
[2025-11-22 15:10:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 15:10:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 15:10:15] Further information can be found at the LHC@home message board.
[2025-11-22 15:10:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 15:10:15] Checking for apptainer binary...
[2025-11-22 15:10:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 15:10:15] Running /usr/bin/apptainer --version
[2025-11-22 15:10:15] apptainer version 1.3.2-1.el7
[2025-11-22 15:10:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 15:10:17] c-204-27.aglt2.org
[2025-11-22 15:10:17] apptainer works
[2025-11-22 15:10:17] Set ATHENA_PROC_NUMBER=8
[2025-11-22 15:10:17] Set ATHENA_CORE_NUMBER=8
[2025-11-22 15:10:17] Starting ATLAS job with PandaID=6895330949
[2025-11-22 15:10:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 03:30:05]  *** The last 200 lines of the pilot log: ***
[2025-11-23 03:30:05] 2025-11-23 08:29:30,457 | INFO     | PID=23087 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 03:30:05] 2025-11-23 08:29:30,680 | INFO     | monitor loop #3259: job 0:6895330949 is in state 'finished'
[2025-11-23 03:30:05] 2025-11-23 08:29:30,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:30:05] 2025-11-23 08:29:31,458 | INFO     | time since job start (44336s) is within the limit (172800.0s)
[2025-11-23 03:30:05] 2025-11-23 08:29:32,749 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 03:30:05] 2025-11-23 08:29:32,752 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-23 03:30:05] 2025-11-23 08:29:32,754 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895330949/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 03:30:05] 2025-11-23 08:29:32,755 | INFO     | extracted standard info from prmon json
[2025-11-23 03:30:05] 2025-11-23 08:29:32,755 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 03:30:05] 2025-11-23 08:29:32,755 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 03:30:05] 2025-11-23 08:29:32,767 | INFO     | fitting pss+swap vs Time
[2025-11-23 03:30:05] 2025-11-23 08:29:32,768 | INFO     | sum of square deviations: 119146343067.69447
[2025-11-23 03:30:05] 2025-11-23 08:29:32,779 | INFO     | sum of deviations: 714999246649.0404
[2025-11-23 03:30:05] 2025-11-23 08:29:32,779 | INFO     | mean x: 1763864411.6176066
[2025-11-23 03:30:05] 2025-11-23 08:29:32,779 | INFO     | mean y: 3124063.4030261347
[2025-11-23 03:30:05] 2025-11-23 08:29:32,779 | INFO     | intersect: -10581856499.37511
[2025-11-23 03:30:05] 2025-11-23 08:29:32,780 | INFO     | chi2: 6.793197334293951
[2025-11-23 03:30:05] 2025-11-23 08:29:32,781 | INFO     | sum of square deviations: 116705029583.27425
[2025-11-23 03:30:05] 2025-11-23 08:29:32,791 | INFO     | sum of deviations: 1005198329004.6609
[2025-11-23 03:30:05] 2025-11-23 08:29:32,791 | INFO     | mean x: 1763864259.1218836
[2025-11-23 03:30:05] 2025-11-23 08:29:32,792 | INFO     | mean y: 3142190.0720221605
[2025-11-23 03:30:05] 2025-11-23 08:29:32,792 | INFO     | intersect: -15189291351.065321
[2025-11-23 03:30:05] 2025-11-23 08:29:32,792 | INFO     | chi2: 3.0735913289280523
[2025-11-23 03:30:05] 2025-11-23 08:29:32,793 | INFO     | current chi2=3.0735913289280523 (change=54.75486464360887 %)
[2025-11-23 03:30:05] 2025-11-23 08:29:32,793 | INFO     | sum of square deviations: 114297298123.82709
[2025-11-23 03:30:05] 2025-11-23 08:29:32,804 | INFO     | sum of deviations: 1116146053317.541
[2025-11-23 03:30:05] 2025-11-23 08:29:32,804 | INFO     | mean x: 1763864106.6262205
[2025-11-23 03:30:05] 2025-11-23 08:29:32,804 | INFO     | mean y: 3149213.8117154813
[2025-11-23 03:30:05] 2025-11-23 08:29:32,804 | INFO     | intersect: -17221492081.439632
[2025-11-23 03:30:05] 2025-11-23 08:29:32,805 | INFO     | chi2: 2.4105739526433543
[2025-11-23 03:30:05] 2025-11-23 08:29:32,805 | INFO     | current chi2=2.4105739526433543 (change=21.571422656112592 %)
[2025-11-23 03:30:05] 2025-11-23 08:29:32,805 | INFO     | right removable region: 716
[2025-11-23 03:30:05] 2025-11-23 08:29:32,806 | INFO     | sum of square deviations: 116704755693.27419
[2025-11-23 03:30:05] 2025-11-23 08:29:32,817 | INFO     | sum of deviations: 501118781488.5432
[2025-11-23 03:30:05] 2025-11-23 08:29:32,817 | INFO     | mean x: 1763864564.1218836
[2025-11-23 03:30:05] 2025-11-23 08:29:32,817 | INFO     | mean y: 3137402.130193906
[2025-11-23 03:30:05] 2025-11-23 08:29:32,817 | INFO     | intersect: -7570724141.324621
[2025-11-23 03:30:05] 2025-11-23 08:29:32,818 | INFO     | chi2: 4.649414457654723
[2025-11-23 03:30:05] 2025-11-23 08:29:32,818 | INFO     | current chi2=4.649414457654723 (change=31.557788934185897 %)
[2025-11-23 03:30:05] 2025-11-23 08:29:32,819 | INFO     | sum of square deviations: 114296882836.57191
[2025-11-23 03:30:05] 2025-11-23 08:29:32,829 | INFO     | sum of deviations: 447634395006.6783
[2025-11-23 03:30:05] 2025-11-23 08:29:32,830 | INFO     | mean x: 1763864716.6220362
[2025-11-23 03:30:05] 2025-11-23 08:29:32,830 | INFO     | mean y: 3140788.0836820086
[2025-11-23 03:30:05] 2025-11-23 08:29:32,830 | INFO     | intersect: -6904891134.603988
[2025-11-23 03:30:05] 2025-11-23 08:29:32,831 | INFO     | chi2: 4.5780943435912835
[2025-11-23 03:30:05] 2025-11-23 08:29:32,831 | INFO     | current chi2=4.5780943435912835 (change=1.533959054693851 %)
[2025-11-23 03:30:05] 2025-11-23 08:29:32,831 | INFO     | left removable region: 20
[2025-11-23 03:30:05] 2025-11-23 08:29:32,832 | INFO     | sum of square deviations: 104545588871.83902
[2025-11-23 03:30:05] 2025-11-23 08:29:32,841 | INFO     | sum of deviations: 783062458888.4081
[2025-11-23 03:30:05] 2025-11-23 08:29:32,841 | INFO     | mean x: 1763864686.1321838
[2025-11-23 03:30:05] 2025-11-23 08:29:32,842 | INFO     | mean y: 3172271.0933908047
[2025-11-23 03:30:05] 2025-11-23 08:29:32,842 | INFO     | intersect: -13208444145.954216
[2025-11-23 03:30:05] 2025-11-23 08:29:32,842 | INFO     | chi2: 0.08475778294493937
[2025-11-23 03:30:05] 2025-11-23 08:29:32,843 | INFO     | current memory leak: 7.49 B/s (using 696 data points, chi2=0.08)
[2025-11-23 03:30:05] 2025-11-23 08:29:32,843 | INFO     | could have reported an average CPU frequency of 2168 MHz (28 samples)
[2025-11-23 03:30:05] 2025-11-23 08:29:32,843 | INFO     | ..............................
[2025-11-23 03:30:05] 2025-11-23 08:29:32,843 | INFO     | . Timing measurements:
[2025-11-23 03:30:05] 2025-11-23 08:29:32,844 | INFO     | . get job = 0 s
[2025-11-23 03:30:05] 2025-11-23 08:29:32,844 | INFO     | . initial setup = 3 s
[2025-11-23 03:30:05] 2025-11-23 08:29:32,844 | INFO     | . payload setup = 9 s
[2025-11-23 03:30:05] 2025-11-23 08:29:32,844 | INFO     | . stage-in = 0 s
[2025-11-23 03:30:05] 2025-11-23 08:29:32,844 | INFO     | . payload execution = 44292 s
[2025-11-23 03:30:05] 2025-11-23 08:29:32,844 | INFO     | . stage-out = 3 s
[2025-11-23 03:30:05] 2025-11-23 08:29:32,844 | INFO     | . log creation = 0 s
[2025-11-23 03:30:05] 2025-11-23 08:29:32,844 | INFO     | ..............................
[2025-11-23 03:30:05] 2025-11-23 08:29:33,402 | INFO     | 
[2025-11-23 03:30:05] 2025-11-23 08:29:33,403 | INFO     | job summary report
[2025-11-23 03:30:05] 2025-11-23 08:29:33,403 | INFO     | --------------------------------------------------
[2025-11-23 03:30:05] 2025-11-23 08:29:33,403 | INFO     | PanDA job id: 6895330949
[2025-11-23 03:30:05] 2025-11-23 08:29:33,403 | INFO     | task id: 47556137
[2025-11-23 03:30:05] 2025-11-23 08:29:33,403 | INFO     | errors: (none)
[2025-11-23 03:30:05] 2025-11-23 08:29:33,404 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 03:30:05] 2025-11-23 08:29:33,404 | INFO     | pilot state: finished 
[2025-11-23 03:30:05] 2025-11-23 08:29:33,404 | INFO     | transexitcode: 0
[2025-11-23 03:30:05] 2025-11-23 08:29:33,404 | INFO     | exeerrorcode: 0
[2025-11-23 03:30:05] 2025-11-23 08:29:33,404 | INFO     | exeerrordiag: 
[2025-11-23 03:30:05] 2025-11-23 08:29:33,405 | INFO     | exitcode: 0
[2025-11-23 03:30:05] 2025-11-23 08:29:33,405 | INFO     | exitmsg: OK
[2025-11-23 03:30:05] 2025-11-23 08:29:33,405 | INFO     | cpuconsumptiontime: 343498 s
[2025-11-23 03:30:05] 2025-11-23 08:29:33,405 | INFO     | nevents: 1000
[2025-11-23 03:30:05] 2025-11-23 08:29:33,405 | INFO     | neventsw: 0
[2025-11-23 03:30:05] 2025-11-23 08:29:33,406 | INFO     | pid: 29552
[2025-11-23 03:30:05] 2025-11-23 08:29:33,406 | INFO     | pgrp: 29552
[2025-11-23 03:30:05] 2025-11-23 08:29:33,406 | INFO     | corecount: 8
[2025-11-23 03:30:05] 2025-11-23 08:29:33,406 | INFO     | event service: False
[2025-11-23 03:30:05] 2025-11-23 08:29:33,406 | INFO     | sizes: {0: 2298806, 1: 2298806, 6: 2299096, 11: 2299124, 44305: 2344826, 44311: 2353820, 44314: 2354004, 44320: 2354250}
[2025-11-23 03:30:05] 2025-11-23 08:29:33,406 | INFO     | --------------------------------------------------
[2025-11-23 03:30:05] 2025-11-23 08:29:33,407 | INFO     | 
[2025-11-23 03:30:05] 2025-11-23 08:29:33,407 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 03:30:05] 2025-11-23 08:29:33,435 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,439 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,439 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 03:30:05] 2025-11-23 08:29:33,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,440 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 03:30:05] 2025-11-23 08:29:33,440 | INFO     | job 6895330949 has completed (purged errors)
[2025-11-23 03:30:05] 2025-11-23 08:29:33,441 | INFO     | overall cleanup function is called
[2025-11-23 03:30:05] 2025-11-23 08:29:34,458 | INFO     | --- collectZombieJob: --- 10, [29552]
[2025-11-23 03:30:05] 2025-11-23 08:29:34,458 | INFO     | zombie collector waiting for pid 29552
[2025-11-23 03:30:05] 2025-11-23 08:29:34,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 03:30:05] 2025-11-23 08:29:34,459 | INFO     | collected zombie processes
[2025-11-23 03:30:05] 2025-11-23 08:29:34,459 | INFO     | will attempt to kill all subprocesses of pid=29552
[2025-11-23 03:30:05] 2025-11-23 08:29:34,551 | INFO     | process IDs to be killed: [29552] (in reverse order)
[2025-11-23 03:30:05] 2025-11-23 08:29:34,602 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 03:30:05] 2025-11-23 08:29:34,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 03:30:05] 2025-11-23 08:29:34,608 | INFO     | did not find any defunct processes belonging to 29552
[2025-11-23 03:30:05] 2025-11-23 08:29:34,612 | INFO     | did not find any defunct processes belonging to 29552
[2025-11-23 03:30:05] 2025-11-23 08:29:34,615 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:30:05] 2025-11-23 08:29:34,615 | INFO     | ready for new job
[2025-11-23 03:30:05] 2025-11-23 08:29:34,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 03:30:05] 2025-11-23 08:29:34,619 | INFO     | ***************************************
[2025-11-23 03:30:05] 2025-11-23 08:29:34,619 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 03:30:05] 2025-11-23 08:29:34,619 | INFO     | ***************************************
[2025-11-23 03:30:05] 2025-11-23 08:29:34,619 | INFO     | 
[2025-11-23 03:30:05] 2025-11-23 08:29:34,620 | INFO     | architecture information:
[2025-11-23 03:30:05] 2025-11-23 08:29:34,621 | INFO     | executing command: cat /etc/os-release
[2025-11-23 03:30:05] 2025-11-23 08:29:34,638 | INFO     | cat /etc/os-release:
[2025-11-23 03:30:05] NAME="CentOS Linux"
[2025-11-23 03:30:05] VERSION="7 (Core)"
[2025-11-23 03:30:05] ID="centos"
[2025-11-23 03:30:05] ID_LIKE="rhel fedora"
[2025-11-23 03:30:05] VERSION_ID="7"
[2025-11-23 03:30:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 03:30:05] ANSI_COLOR="0;31"
[2025-11-23 03:30:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 03:30:05] HOME_URL="https://www.centos.org/"
[2025-11-23 03:30:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 03:30:05] 
[2025-11-23 03:30:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 03:30:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 03:30:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 03:30:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 03:30:05] 
[2025-11-23 03:30:05] 2025-11-23 08:29:34,639 | INFO     | ***************************************
[2025-11-23 03:30:05] 2025-11-23 08:29:35,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 03:30:05] 2025-11-23 08:29:35,162 | INFO     | sufficient remaining disk space (17442013184 B)
[2025-11-23 03:30:05] 2025-11-23 08:29:35,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 03:30:05] 2025-11-23 08:29:35,163 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 03:30:05] 2025-11-23 08:29:35,163 | INFO     | update_server=False
[2025-11-23 03:30:05] 2025-11-23 08:29:35,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 03:30:05] 2025-11-23 08:29:35,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:30:05] 2025-11-23 08:29:35,164 | INFO     | aborting loop
[2025-11-23 03:30:05] 2025-11-23 08:29:35,488 | INFO     | all data control threads have been joined
[2025-11-23 03:30:05] 2025-11-23 08:29:35,985 | INFO     | all payload control threads have been joined
[2025-11-23 03:30:05] 2025-11-23 08:29:36,167 | INFO     | [job] job monitor thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:36,169 | INFO     | [job] retrieve thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:36,380 | INFO     | all job control threads have been joined
[2025-11-23 03:30:05] 2025-11-23 08:29:36,465 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:36,483 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 03:30:05] 2025-11-23 08:29:36,493 | INFO     | [data] control thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:36,518 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:36,714 | INFO     | [payload] validate_post thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:36,911 | INFO     | [data] copytool_in thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:36,929 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:36,991 | INFO     | [payload] control thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:37,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 03:30:05] 2025-11-23 08:29:37,381 | INFO     | [job] control thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:37,391 | INFO     | [job] validate thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:37,551 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:37,609 | INFO     | [payload] failed_post thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:37,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:30:05] 2025-11-23 08:29:38,485 | INFO     | [data] copytool_out thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:38,953 | INFO     | [job] queue monitor thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:41,327 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 03:30:05] 2025-11-23 08:29:48,657 | INFO     | [monitor] cgroup control has ended
[2025-11-23 03:30:05] 2025-11-23 08:29:48,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483109123904)>', '<ExcThread(monitor, started 140482541778688)>']
[2025-11-23 03:30:05] 2025-11-23 08:29:53,855 | INFO     | all workflow threads have been joined
[2025-11-23 03:30:05] 2025-11-23 08:29:53,856 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 03:30:05] 2025-11-23 08:29:53,862 | INFO     | traces error code: 0
[2025-11-23 03:30:05] 2025-11-23 08:29:53,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 03:30:05] 2025-11-23 08:30:04,659 | INFO     | PID=23087 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 03:30:05] 2025-11-23 08:30:04,660 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 03:30:05] 2025-11-23 08:30:04,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 03:30:05] 2025-11-23 08:30:04,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 03:30:05] 2025-11-23 08:30:04,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 03:30:05] 2025-11-23 08:30:04,660 | INFO     | [monitor] control thread has ended
[2025-11-23 03:30:05] 2025-11-23 08:30:04,772 [wrapper] ==== pilot stdout END ====
[2025-11-23 03:30:05] 2025-11-23 08:30:04,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 03:30:05] 2025-11-23 08:30:04,782 [wrapper] pilotpid: 23087
[2025-11-23 03:30:05] 2025-11-23 08:30:04,786 [wrapper] Pilot exit status: 0
[2025-11-23 03:30:05] 2025-11-23 08:30:04,804 [wrapper] pandaids: 6895330949
[2025-11-23 03:30:05] 2025-11-23 08:30:04,848 [wrapper] cleanup supervisor_pilot 24199 23088
[2025-11-23 03:30:05] 2025-11-23 08:30:04,853 [wrapper] Test setup, not cleaning
[2025-11-23 03:30:05] 2025-11-23 08:30:04,858 [wrapper] apfmon messages muted
[2025-11-23 03:30:05] 2025-11-23 08:30:04,863 [wrapper] ==== wrapper stdout END ====
[2025-11-23 03:30:05] 2025-11-23 08:30:04,868 [wrapper] ==== wrapper stderr END ====
[2025-11-23 03:30:05]  *** Error codes and diagnostics ***
[2025-11-23 03:30:05]     "exeErrorCode": 0,
[2025-11-23 03:30:05]     "exeErrorDiag": "",
[2025-11-23 03:30:05]     "pilotErrorCode": 0,
[2025-11-23 03:30:05]     "pilotErrorDiag": "",
[2025-11-23 03:30:05]  *** Listing of results directory ***
[2025-11-23 03:30:05] total 1308712
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 17:05 queuedata.json
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 17:05 pilot3.tar.gz
[2025-11-23 03:30:05] -rwx------ 1 boincer umatlas     36292 Nov 21 17:06 runpilot2-wrapper.sh
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas       100 Nov 22 15:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 03:30:05] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 15:10 run_atlas
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas       105 Nov 22 15:10 job.xml
[2025-11-23 03:30:05] -rw-r--r-- 2 boincer umatlas 408932266 Nov 22 15:10 EVNT.47483658._000151.pool.root.1
[2025-11-23 03:30:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 15:10 start_atlas.sh
[2025-11-23 03:30:05] drwxrwx--x 2 boincer umatlas      4096 Nov 22 15:10 shared
[2025-11-23 03:30:05] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 15:10 input.tar.gz
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas         0 Nov 22 15:10 boinc_lockfile
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 15:10 pandaJob.out
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas        57 Nov 22 15:10 setup.sh.local
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas    989768 Nov 22 15:10 agis_schedconf.cvmfs.json
[2025-11-23 03:30:05] drwx------ 5 boincer umatlas      4096 Nov 22 15:10 pilot3
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas       532 Nov 23 03:17 boinc_task_state.xml
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas 911068924 Nov 23 03:28 HITS.47556137._001504.pool.root.1
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 03:28 init_data.xml
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas      1063 Nov 23 03:29 memory_monitor_summary.json
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas   1526164 Nov 23 03:29 agis_ddmendpoints.agis.ALL.json
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas   1981623 Nov 23 03:29 log.47556137._001504.job.log.tgz.1
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas      8670 Nov 23 03:29 heartbeat.json
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 03:30 boinc_mmap_file
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas        29 Nov 23 03:30 wrapper_checkpoint.txt
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas        95 Nov 23 03:30 pilot_heartbeat.json
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas       745 Nov 23 03:30 pilotlog.txt
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas   6121965 Nov 23 03:30 log.47556137._001504.job.log.1
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas       353 Nov 23 03:30 output.list
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas       620 Nov 23 03:30 runtime_log
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas   8120320 Nov 23 03:30 result.tar.gz
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 03:30 runtime_log.err
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas       668 Nov 23 03:30 7wfKDmGSog8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlpHKDmTkjZCn.diag
[2025-11-23 03:30:05] -rw-r--r-- 1 boincer umatlas     21424 Nov 23 03:30 stderr.txt
[2025-11-23 03:30:05] HITS file was successfully produced:
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas 911068924 Nov 23 03:28 shared/HITS.pool.root.1
[2025-11-23 03:30:05]  *** Contents of shared directory: ***
[2025-11-23 03:30:05] total 1297596
[2025-11-23 03:30:05] -rw-r--r-- 2 boincer umatlas 408932266 Nov 22 15:10 ATLAS.root_0
[2025-11-23 03:30:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 15:10 start_atlas.sh
[2025-11-23 03:30:05] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 15:10 input.tar.gz
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas 911068924 Nov 23 03:28 HITS.pool.root.1
[2025-11-23 03:30:05] -rw------- 1 boincer umatlas   8120320 Nov 23 03:30 result.tar.gz
03:30:06 (19060): run_atlas exited; CPU time 341014.833217
03:30:06 (19060): called boinc_finish(0)

</stderr_txt>
]]>

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