Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:30:29 (775344): wrapper (7.7.26015): starting
03:30:29 (775344): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 03:30:29] Arguments: --nthreads 12
[2025-11-23 03:30:29] Threads: 12
[2025-11-23 03:30:29] Checking for CVMFS
[2025-11-23 03:30:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 03:30:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 03:30:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 03:30:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 03:30:30] 2.13.3.0 8990 2140 64188 153193 2 81 3274792 4097025 1044 130560 0 1728746 99.990 81639 6270 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-23 03:30:30] CVMFS is ok
[2025-11-23 03:30:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 03:30:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 03:30:30] Further information can be found at the LHC@home message board.
[2025-11-23 03:30:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 03:30:30] Checking for apptainer binary...
[2025-11-23 03:30:30] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-23 03:30:30] apptainer is not installed, using version from CVMFS
[2025-11-23 03:30:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 03:30:30] pckelar2.cern.ch
[2025-11-23 03:30:30] apptainer works
[2025-11-23 03:30:30] Set ATHENA_PROC_NUMBER=12
[2025-11-23 03:30:30] Set ATHENA_CORE_NUMBER=12
[2025-11-23 03:30:30] Starting ATLAS job with PandaID=6895330888
[2025-11-23 03:30:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 15:40:59]  *** The last 200 lines of the pilot log: ***
[2025-11-23 15:40:59] 2025-11-23 14:40:10,462 | INFO     | monitor loop #3232: job 0:6895330888 is in state 'finished'
[2025-11-23 15:40:59] 2025-11-23 14:40:10,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 15:40:59] 2025-11-23 14:40:11,735 | INFO     | time since job start (43771s) is within the limit (172800.0s)
[2025-11-23 15:40:59] 2025-11-23 14:40:12,631 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 15:40:59] 2025-11-23 14:40:12,637 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2808.618666666667
[2025-11-23 15:40:59] 2025-11-23 14:40:12,642 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6895330888/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 15:40:59] 2025-11-23 14:40:12,643 | INFO     | extracted standard info from prmon json
[2025-11-23 15:40:59] 2025-11-23 14:40:12,643 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 15:40:59] 2025-11-23 14:40:12,644 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 15:40:59] 2025-11-23 14:40:12,664 | INFO     | fitting pss+swap vs Time
[2025-11-23 15:40:59] 2025-11-23 14:40:12,665 | INFO     | sum of square deviations: 114296799355.72662
[2025-11-23 15:40:59] 2025-11-23 14:40:12,683 | INFO     | sum of deviations: 1654009297420.4343
[2025-11-23 15:40:59] 2025-11-23 14:40:12,683 | INFO     | mean x: 1763886910.9804742
[2025-11-23 15:40:59] 2025-11-23 14:40:12,684 | INFO     | mean y: 3551574.9595536957
[2025-11-23 15:40:59] 2025-11-23 14:40:12,684 | INFO     | intersect: -25521969409.05162
[2025-11-23 15:40:59] 2025-11-23 14:40:12,685 | INFO     | chi2: 5.673347753323063
[2025-11-23 15:40:59] 2025-11-23 14:40:12,686 | INFO     | sum of square deviations: 111922494825.88654
[2025-11-23 15:40:59] 2025-11-23 14:40:12,704 | INFO     | sum of deviations: 1907698511300.3342
[2025-11-23 15:40:59] 2025-11-23 14:40:12,704 | INFO     | mean x: 1763886758.4873595
[2025-11-23 15:40:59] 2025-11-23 14:40:12,704 | INFO     | mean y: 3567858.592696629
[2025-11-23 15:40:59] 2025-11-23 14:40:12,704 | INFO     | intersect: -30061560232.98042
[2025-11-23 15:40:59] 2025-11-23 14:40:12,705 | INFO     | chi2: 3.2152437680111143
[2025-11-23 15:40:59] 2025-11-23 14:40:12,706 | INFO     | current chi2=3.2152437680111143 (change=43.32722216564564 %)
[2025-11-23 15:40:59] 2025-11-23 14:40:12,707 | INFO     | sum of square deviations: 109581264008.9645
[2025-11-23 15:40:59] 2025-11-23 14:40:12,724 | INFO     | sum of deviations: 2007926085012.0928
[2025-11-23 15:40:59] 2025-11-23 14:40:12,724 | INFO     | mean x: 1763886605.9929278
[2025-11-23 15:40:59] 2025-11-23 14:40:12,724 | INFO     | mean y: 3574372.6181046674
[2025-11-23 15:40:59] 2025-11-23 14:40:12,725 | INFO     | intersect: -32317223887.994293
[2025-11-23 15:40:59] 2025-11-23 14:40:12,726 | INFO     | chi2: 2.5853328233778226
[2025-11-23 15:40:59] 2025-11-23 14:40:12,726 | INFO     | current chi2=2.5853328233778226 (change=19.591389956194273 %)
[2025-11-23 15:40:59] 2025-11-23 14:40:12,726 | INFO     | right removable region: 706
[2025-11-23 15:40:59] 2025-11-23 14:40:12,727 | INFO     | sum of square deviations: 111922109489.85966
[2025-11-23 15:40:59] 2025-11-23 14:40:12,745 | INFO     | sum of deviations: 1399317735983.8691
[2025-11-23 15:40:59] 2025-11-23 14:40:12,745 | INFO     | mean x: 1763887063.485955
[2025-11-23 15:40:59] 2025-11-23 14:40:12,745 | INFO     | mean y: 3567906.087078652
[2025-11-23 15:40:59] 2025-11-23 14:40:12,745 | INFO     | intersect: -22049612323.0796
[2025-11-23 15:40:59] 2025-11-23 14:40:12,746 | INFO     | chi2: 3.3295092840839615
[2025-11-23 15:40:59] 2025-11-23 14:40:12,747 | INFO     | current chi2=3.3295092840839615 (change=41.31314650800737 %)
[2025-11-23 15:40:59] 2025-11-23 14:40:12,748 | INFO     | sum of square deviations: 109580710499.85854
[2025-11-23 15:40:59] 2025-11-23 14:40:12,765 | INFO     | sum of deviations: 1327100643612.6648
[2025-11-23 15:40:59] 2025-11-23 14:40:12,765 | INFO     | mean x: 1763887215.9858558
[2025-11-23 15:40:59] 2025-11-23 14:40:12,765 | INFO     | mean y: 3572608.0664780764
[2025-11-23 15:40:59] 2025-11-23 14:40:12,766 | INFO     | intersect: -21358360974.194817
[2025-11-23 15:40:59] 2025-11-23 14:40:12,767 | INFO     | chi2: 3.2662421516753053
[2025-11-23 15:40:59] 2025-11-23 14:40:12,767 | INFO     | current chi2=3.2662421516753053 (change=1.9001939027799626 %)
[2025-11-23 15:40:59] 2025-11-23 14:40:12,767 | INFO     | left removable region: 20
[2025-11-23 15:40:59] 2025-11-23 14:40:12,768 | INFO     | sum of square deviations: 100103635047.5
[2025-11-23 15:40:59] 2025-11-23 14:40:12,784 | INFO     | sum of deviations: 1591841339229.4998
[2025-11-23 15:40:59] 2025-11-23 14:40:12,785 | INFO     | mean x: 1763887185.5
[2025-11-23 15:40:59] 2025-11-23 14:40:12,785 | INFO     | mean y: 3602484.555393586
[2025-11-23 15:40:59] 2025-11-23 14:40:12,785 | INFO     | intersect: -28045614092.68214
[2025-11-23 15:40:59] 2025-11-23 14:40:12,786 | INFO     | chi2: 0.13325546588730286
[2025-11-23 15:40:59] 2025-11-23 14:40:12,786 | INFO     | current memory leak: 15.90 B/s (using 686 data points, chi2=0.13)
[2025-11-23 15:40:59] 2025-11-23 14:40:12,787 | INFO     | could have reported an average CPU frequency of 2801 MHz (28 samples)
[2025-11-23 15:40:59] 2025-11-23 14:40:12,788 | INFO     | ..............................
[2025-11-23 15:40:59] 2025-11-23 14:40:12,788 | INFO     | . Timing measurements:
[2025-11-23 15:40:59] 2025-11-23 14:40:12,788 | INFO     | . get job = 0 s
[2025-11-23 15:40:59] 2025-11-23 14:40:12,788 | INFO     | . initial setup = 1 s
[2025-11-23 15:40:59] 2025-11-23 14:40:12,788 | INFO     | . payload setup = 8 s
[2025-11-23 15:40:59] 2025-11-23 14:40:12,788 | INFO     | . stage-in = 0 s
[2025-11-23 15:40:59] 2025-11-23 14:40:12,788 | INFO     | . payload execution = 43730 s
[2025-11-23 15:40:59] 2025-11-23 14:40:12,789 | INFO     | . stage-out = 3 s
[2025-11-23 15:40:59] 2025-11-23 14:40:12,789 | INFO     | . log creation = 0 s
[2025-11-23 15:40:59] 2025-11-23 14:40:12,789 | INFO     | ..............................
[2025-11-23 15:40:59] 2025-11-23 14:40:12,949 | INFO     | 
[2025-11-23 15:40:59] 2025-11-23 14:40:12,949 | INFO     | job summary report
[2025-11-23 15:40:59] 2025-11-23 14:40:12,950 | INFO     | --------------------------------------------------
[2025-11-23 15:40:59] 2025-11-23 14:40:12,950 | INFO     | PanDA job id: 6895330888
[2025-11-23 15:40:59] 2025-11-23 14:40:12,950 | INFO     | task id: 47556137
[2025-11-23 15:40:59] 2025-11-23 14:40:12,950 | INFO     | errors: (none)
[2025-11-23 15:40:59] 2025-11-23 14:40:12,950 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 15:40:59] 2025-11-23 14:40:12,950 | INFO     | pilot state: finished 
[2025-11-23 15:40:59] 2025-11-23 14:40:12,951 | INFO     | transexitcode: 0
[2025-11-23 15:40:59] 2025-11-23 14:40:12,951 | INFO     | exeerrorcode: 0
[2025-11-23 15:40:59] 2025-11-23 14:40:12,951 | INFO     | exeerrordiag: 
[2025-11-23 15:40:59] 2025-11-23 14:40:12,951 | INFO     | exitcode: 0
[2025-11-23 15:40:59] 2025-11-23 14:40:12,951 | INFO     | exitmsg: OK
[2025-11-23 15:40:59] 2025-11-23 14:40:12,951 | INFO     | cpuconsumptiontime: 505231 s
[2025-11-23 15:40:59] 2025-11-23 14:40:12,951 | INFO     | nevents: 1000
[2025-11-23 15:40:59] 2025-11-23 14:40:12,952 | INFO     | neventsw: 0
[2025-11-23 15:40:59] 2025-11-23 14:40:12,952 | INFO     | pid: 786679
[2025-11-23 15:40:59] 2025-11-23 14:40:12,952 | INFO     | pgrp: 786679
[2025-11-23 15:40:59] 2025-11-23 14:40:12,952 | INFO     | corecount: 12
[2025-11-23 15:40:59] 2025-11-23 14:40:12,952 | INFO     | event service: False
[2025-11-23 15:40:59] 2025-11-23 14:40:12,952 | INFO     | sizes: {0: 2298693, 1: 2298835, 6: 2299097, 12: 2299125, 43742: 2344568, 43743: 2344567, 43747: 2353831, 43755: 2354021}
[2025-11-23 15:40:59] 2025-11-23 14:40:12,953 | INFO     | --------------------------------------------------
[2025-11-23 15:40:59] 2025-11-23 14:40:12,953 | INFO     | 
[2025-11-23 15:40:59] 2025-11-23 14:40:12,953 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-11-23 15:40:59] 2025-11-23 14:40:12,973 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,977 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 15:40:59] 2025-11-23 14:40:12,977 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,977 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 15:40:59] 2025-11-23 14:40:12,977 | INFO     | job 6895330888 has completed (purged errors)
[2025-11-23 15:40:59] 2025-11-23 14:40:12,977 | INFO     | overall cleanup function is called
[2025-11-23 15:40:59] 2025-11-23 14:40:14,000 | INFO     | --- collectZombieJob: --- 10, [786679]
[2025-11-23 15:40:59] 2025-11-23 14:40:14,000 | INFO     | zombie collector waiting for pid 786679
[2025-11-23 15:40:59] 2025-11-23 14:40:14,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 15:40:59] 2025-11-23 14:40:14,001 | INFO     | collected zombie processes
[2025-11-23 15:40:59] 2025-11-23 14:40:14,001 | INFO     | will attempt to kill all subprocesses of pid=786679
[2025-11-23 15:40:59] 2025-11-23 14:40:14,189 | INFO     | process IDs to be killed: [786679] (in reverse order)
[2025-11-23 15:40:59] 2025-11-23 14:40:14,250 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 15:40:59] 2025-11-23 14:40:14,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 15:40:59] 2025-11-23 14:40:14,257 | INFO     | did not find any defunct processes belonging to 786679
[2025-11-23 15:40:59] 2025-11-23 14:40:14,263 | INFO     | did not find any defunct processes belonging to 786679
[2025-11-23 15:40:59] 2025-11-23 14:40:14,264 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 15:40:59] 2025-11-23 14:40:14,265 | INFO     | ready for new job
[2025-11-23 15:40:59] 2025-11-23 14:40:14,265 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 15:40:59] 2025-11-23 14:40:14,267 | INFO     | ***************************************
[2025-11-23 15:40:59] 2025-11-23 14:40:14,268 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 15:40:59] 2025-11-23 14:40:14,268 | INFO     | ***************************************
[2025-11-23 15:40:59] 2025-11-23 14:40:14,268 | INFO     | 
[2025-11-23 15:40:59] 2025-11-23 14:40:14,269 | INFO     | architecture information:
[2025-11-23 15:40:59] 2025-11-23 14:40:14,270 | INFO     | executing command: cat /etc/os-release
[2025-11-23 15:40:59] 2025-11-23 14:40:14,285 | INFO     | cat /etc/os-release:
[2025-11-23 15:40:59] NAME="CentOS Linux"
[2025-11-23 15:40:59] VERSION="7 (Core)"
[2025-11-23 15:40:59] ID="centos"
[2025-11-23 15:40:59] ID_LIKE="rhel fedora"
[2025-11-23 15:40:59] VERSION_ID="7"
[2025-11-23 15:40:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 15:40:59] ANSI_COLOR="0;31"
[2025-11-23 15:40:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 15:40:59] HOME_URL="https://www.centos.org/"
[2025-11-23 15:40:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 15:40:59] 
[2025-11-23 15:40:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 15:40:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 15:40:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 15:40:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 15:40:59] 
[2025-11-23 15:40:59] 2025-11-23 14:40:14,285 | INFO     | ***************************************
[2025-11-23 15:40:59] 2025-11-23 14:40:14,788 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-11-23 15:40:59] 2025-11-23 14:40:14,806 | INFO     | sufficient remaining disk space (230428770304 B)
[2025-11-23 15:40:59] 2025-11-23 14:40:14,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 15:40:59] 2025-11-23 14:40:14,807 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 15:40:59] 2025-11-23 14:40:14,807 | INFO     | update_server=False
[2025-11-23 15:40:59] 2025-11-23 14:40:14,807 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 15:40:59] 2025-11-23 14:40:14,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:40:59] 2025-11-23 14:40:14,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:40:59] 2025-11-23 14:40:14,808 | INFO     | aborting loop
[2025-11-23 15:40:59] 2025-11-23 14:40:14,943 | INFO     | all data control threads have been joined
[2025-11-23 15:40:59] 2025-11-23 14:40:15,124 | INFO     | all payload control threads have been joined
[2025-11-23 15:40:59] 2025-11-23 14:40:15,325 | INFO     | all job control threads have been joined
[2025-11-23 15:40:59] 2025-11-23 14:40:15,813 | INFO     | [job] retrieve thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:15,813 | INFO     | [data] copytool_in thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:15,814 | INFO     | [job] queue monitor thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:15,814 | INFO     | [job] job monitor thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:15,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 15:40:59] 2025-11-23 14:40:15,949 | INFO     | [data] control thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:16,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 15:40:59] 2025-11-23 14:40:16,130 | INFO     | [payload] control thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:16,268 | INFO     | [payload] validate_post thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:16,331 | INFO     | [job] control thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:16,463 | INFO     | [payload] failed_post thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:16,675 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:16,693 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:16,954 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:16,955 | INFO     | [job] validate thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:17,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:17,874 | INFO     | [data] copytool_out thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:20,016 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 15:40:59] 2025-11-23 14:40:45,045 | INFO     | PID=779180 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 15:40:59] 2025-11-23 14:40:45,045 | INFO     | .. there are 2 such processes running
[2025-11-23 15:40:59] 2025-11-23 14:40:45,046 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 15:40:59] 2025-11-23 14:40:45,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 15:40:59] 2025-11-23 14:40:45,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 15:40:59] 2025-11-23 14:40:53,549 | INFO     | [monitor] cgroup control has ended
[2025-11-23 15:40:59] 2025-11-23 14:40:54,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284361238336)>', '<ExcThread(monitor, started 140283824039680)>']
[2025-11-23 15:40:59] 2025-11-23 14:40:55,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 15:40:59] 2025-11-23 14:40:55,096 | INFO     | [monitor] control thread has ended
[2025-11-23 15:40:59] 2025-11-23 14:40:59,567 | INFO     | all workflow threads have been joined
[2025-11-23 15:40:59] 2025-11-23 14:40:59,567 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 15:40:59] 2025-11-23 14:40:59,567 | INFO     | traces error code: 0
[2025-11-23 15:40:59] 2025-11-23 14:40:59,568 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 15:40:59] 2025-11-23 14:40:59,681 [wrapper] ==== pilot stdout END ====
[2025-11-23 15:40:59] 2025-11-23 14:40:59,684 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 15:40:59] 2025-11-23 14:40:59,687 [wrapper] pilotpid: 779180
[2025-11-23 15:40:59] 2025-11-23 14:40:59,689 [wrapper] Pilot exit status: 0
[2025-11-23 15:40:59] 2025-11-23 14:40:59,699 [wrapper] pandaids: 6895330888
[2025-11-23 15:40:59] 2025-11-23 14:40:59,738 [wrapper] cleanup supervisor_pilot 1028457 779181
[2025-11-23 15:40:59] 2025-11-23 14:40:59,741 [wrapper] Test setup, not cleaning
[2025-11-23 15:40:59] 2025-11-23 14:40:59,744 [wrapper] apfmon messages muted
[2025-11-23 15:40:59] 2025-11-23 14:40:59,747 [wrapper] ==== wrapper stdout END ====
[2025-11-23 15:40:59] 2025-11-23 14:40:59,749 [wrapper] ==== wrapper stderr END ====
[2025-11-23 15:40:59]  *** Error codes and diagnostics ***
[2025-11-23 15:40:59]     "exeErrorCode": 0,
[2025-11-23 15:40:59]     "exeErrorDiag": "",
[2025-11-23 15:40:59]     "pilotErrorCode": 0,
[2025-11-23 15:40:59]     "pilotErrorDiag": "",
[2025-11-23 15:40:59]  *** Listing of results directory ***
[2025-11-23 15:40:59] total 1313844
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc    576529 Nov 21 22:26 pilot3.tar.gz
[2025-11-23 15:40:59] -rwx------ 1 boinc boinc     36292 Nov 21 22:53 runpilot2-wrapper.sh
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc      5112 Nov 21 22:53 queuedata.json
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc       100 Nov 23 03:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 15:40:59] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 03:30 run_atlas
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc       105 Nov 23 03:30 job.xml
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc      6296 Nov 23 03:30 init_data.xml
[2025-11-23 15:40:59] -rw-r--r-- 2 boinc boinc 408390457 Nov 23 03:30 EVNT.47483658._000148.pool.root.1
[2025-11-23 15:40:59] -rw-r--r-- 2 boinc boinc     15847 Nov 23 03:30 start_atlas.sh
[2025-11-23 15:40:59] drwxrwx--x 2 boinc boinc        68 Nov 23 03:30 shared
[2025-11-23 15:40:59] -rw-r--r-- 2 boinc boinc    590097 Nov 23 03:30 input.tar.gz
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc         0 Nov 23 03:30 boinc_lockfile
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc      2785 Nov 23 03:30 pandaJob.out
[2025-11-23 15:40:59] -rw------- 1 boinc boinc    989784 Nov 23 03:30 agis_schedconf.cvmfs.json
[2025-11-23 15:40:59] drwx------ 5 boinc boinc      4096 Nov 23 03:30 pilot3
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc       533 Nov 23 15:27 boinc_task_state.xml
[2025-11-23 15:40:59] -rw------- 1 boinc boinc 915808164 Nov 23 15:39 HITS.47556137._001480.pool.root.1
[2025-11-23 15:40:59] -rw------- 1 boinc boinc      1036 Nov 23 15:39 memory_monitor_summary.json
[2025-11-23 15:40:59] -rw------- 1 boinc boinc   1526164 Nov 23 15:40 agis_ddmendpoints.agis.ALL.json
[2025-11-23 15:40:59] -rw------- 1 boinc boinc   2422439 Nov 23 15:40 log.47556137._001480.job.log.tgz.1
[2025-11-23 15:40:59] -rw------- 1 boinc boinc      8609 Nov 23 15:40 heartbeat.json
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc      8192 Nov 23 15:40 boinc_mmap_file
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc        29 Nov 23 15:40 wrapper_checkpoint.txt
[2025-11-23 15:40:59] -rw------- 1 boinc boinc        95 Nov 23 15:40 pilot_heartbeat.json
[2025-11-23 15:40:59] -rw------- 1 boinc boinc      4824 Nov 23 15:40 pilotlog.txt
[2025-11-23 15:40:59] -rw------- 1 boinc boinc   6210707 Nov 23 15:40 log.47556137._001480.job.log.1
[2025-11-23 15:40:59] -rw------- 1 boinc boinc       353 Nov 23 15:40 output.list
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc       620 Nov 23 15:40 runtime_log
[2025-11-23 15:40:59] -rw------- 1 boinc boinc   8652800 Nov 23 15:40 result.tar.gz
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc      8858 Nov 23 15:40 runtime_log.err
[2025-11-23 15:40:59] -rw------- 1 boinc boinc       666 Nov 23 15:40 kdGLDmdFog8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmljJKDmmNhfUo.diag
[2025-11-23 15:40:59] -rw-r--r-- 1 boinc boinc     21425 Nov 23 15:40 stderr.txt
[2025-11-23 15:40:59] HITS file was successfully produced:
[2025-11-23 15:40:59] -rw------- 1 boinc boinc 915808164 Nov 23 15:39 shared/HITS.pool.root.1
[2025-11-23 15:40:59]  *** Contents of shared directory: ***
[2025-11-23 15:40:59] total 1302212
[2025-11-23 15:40:59] -rw-r--r-- 2 boinc boinc 408390457 Nov 23 03:30 ATLAS.root_0
[2025-11-23 15:40:59] -rw-r--r-- 2 boinc boinc     15847 Nov 23 03:30 start_atlas.sh
[2025-11-23 15:40:59] -rw-r--r-- 2 boinc boinc    590097 Nov 23 03:30 input.tar.gz
[2025-11-23 15:40:59] -rw------- 1 boinc boinc 915808164 Nov 23 15:39 HITS.pool.root.1
[2025-11-23 15:40:59] -rw------- 1 boinc boinc   8652800 Nov 23 15:40 result.tar.gz
15:41:01 (775344): run_atlas exited; CPU time 504031.315714
15:41:01 (775344): called boinc_finish(0)

</stderr_txt>
]]>

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