Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:17:37 (1399306): wrapper (7.7.26015): starting
13:17:37 (1399306): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 13:17:37] Arguments: --nthreads 3
[2025-11-25 13:17:37] Threads: 3
[2025-11-25 13:17:37] Checking for CVMFS
[2025-11-25 13:17:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:17:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:17:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:17:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:17:37] 2.9.2.0 2059758 9726 88248 153281 1 81 18857924 36864001 0 130560 1 3607313 99.924 509474 668 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 13:17:37] CVMFS is ok
[2025-11-25 13:17:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:17:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:17:37] Further information can be found at the LHC@home message board.
[2025-11-25 13:17:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:17:37] Checking for apptainer binary...
[2025-11-25 13:17:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:17:37] Running /usr/bin/apptainer --version
[2025-11-25 13:17:37] apptainer version 1.4.1-1.1
[2025-11-25 13:17:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:17:37] atlasA303
[2025-11-25 13:17:37] apptainer works
[2025-11-25 13:17:37] Set ATHENA_PROC_NUMBER=3
[2025-11-25 13:17:37] Set ATHENA_CORE_NUMBER=3
[2025-11-25 13:17:37] Starting ATLAS job with PandaID=6895330851
[2025-11-25 13:17:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:24:21]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:24:21] 2025-11-25 20:23:59,918 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:23:59,918 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:00,199 | INFO     | all payload control threads have been joined
[2025-11-25 21:24:21] 2025-11-25 20:24:00,235 | INFO     | [data] control thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:00,495 | INFO     | all job control threads have been joined
[2025-11-25 21:24:21] 2025-11-25 20:24:00,642 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:00,820 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:00,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:24:21] 2025-11-25 20:24:01,205 | INFO     | [payload] control thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:01,230 | INFO     | [job] validate thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:01,272 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:01,335 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:01,362 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:01,431 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:01,501 | INFO     | [job] control thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:01,747 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:04,834 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:09,149 | INFO     | job.realtimelogging is not enabled
[2025-11-25 21:24:21] 2025-11-25 20:24:10,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:24:21] 2025-11-25 20:24:15,858 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:24:21] 2025-11-25 20:24:16,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140519453202240)>', '<ExcThread(monitor, started 140518956713728)>']
[2025-11-25 21:24:21] 2025-11-25 20:24:16,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:24:21] 2025-11-25 20:24:16,999 | INFO     | [monitor] control thread has ended
[2025-11-25 21:24:21] 2025-11-25 20:24:21,774 | INFO     | all workflow threads have been joined
[2025-11-25 21:24:21] 2025-11-25 20:24:21,775 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:24:21] 2025-11-25 20:24:21,775 | INFO     | traces error code: 0
[2025-11-25 21:24:21] 2025-11-25 20:24:21,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:24:21] 2025-11-25 20:24:21,827 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:24:21] 2025-11-25 20:24:21,830 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:24:21] 2025-11-25 20:24:21,832 [wrapper] pilotpid: 1403046
[2025-11-25 21:24:21] 2025-11-25 20:24:21,835 [wrapper] Pilot exit status: 0
[2025-11-25 21:24:21] 2025-11-25 20:24:21,842 [wrapper] pandaids: 6895330851
[2025-11-25 21:24:21] 2025-11-25 20:24:21,858 [wrapper] cleanup supervisor_pilot 1570519 1403047
[2025-11-25 21:24:21] 2025-11-25 20:24:21,861 [wrapper] Test setup, not cleaning
[2025-11-25 21:24:21] 2025-11-25 20:24:21,863 [wrapper] apfmon messages muted
[2025-11-25 21:24:21] 2025-11-25 20:24:21,865 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:24:21] 2025-11-25 20:24:21,867 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:24:21]  *** Error codes and diagnostics ***
[2025-11-25 21:24:21]     "exeErrorCode": 0,
[2025-11-25 21:24:21]     "exeErrorDiag": "",
[2025-11-25 21:24:21]     "pilotErrorCode": 0,
[2025-11-25 21:24:21]     "pilotErrorDiag": "",
[2025-11-25 21:24:21]  *** Listing of results directory ***
[2025-11-25 21:24:21] total 1309288
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc    576529 Nov 21 22:26 pilot3.tar.gz
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc      5112 Nov 21 22:47 queuedata.json
[2025-11-25 21:24:21] -rwx------ 1 boinc boinc     36292 Nov 21 22:48 runpilot2-wrapper.sh
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc       100 Nov 25 13:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:24:21] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 13:17 run_atlas
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc       105 Nov 25 13:17 job.xml
[2025-11-25 21:24:21] -rw-r--r-- 2 boinc boinc 408554081 Nov 25 13:17 EVNT.47483658._000145.pool.root.1
[2025-11-25 21:24:21] drwxrwx--x 2 boinc boinc      4096 Nov 25 13:17 shared
[2025-11-25 21:24:21] -rw-r--r-- 2 boinc boinc    590104 Nov 25 13:17 input.tar.gz
[2025-11-25 21:24:21] -rw-r--r-- 2 boinc boinc     15847 Nov 25 13:17 start_atlas.sh
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc         0 Nov 25 13:17 boinc_setup_complete
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc      6448 Nov 25 13:17 init_data.xml
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc         0 Nov 25 13:17 boinc_lockfile
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc      2785 Nov 25 13:17 pandaJob.out
[2025-11-25 21:24:21] -rw------- 1 boinc boinc    991894 Nov 25 13:17 agis_schedconf.cvmfs.json
[2025-11-25 21:24:21] drwx------ 5 boinc boinc      4096 Nov 25 13:17 pilot3
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc       531 Nov 25 21:20 boinc_task_state.xml
[2025-11-25 21:24:21] -rw------- 1 boinc boinc        95 Nov 25 21:23 pilot_heartbeat.json
[2025-11-25 21:24:21] -rw------- 1 boinc boinc 917705752 Nov 25 21:23 HITS.47556137._001444.pool.root.1
[2025-11-25 21:24:21] -rw------- 1 boinc boinc      1022 Nov 25 21:23 memory_monitor_summary.json
[2025-11-25 21:24:21] -rw------- 1 boinc boinc   1516240 Nov 25 21:23 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:24:21] -rw------- 1 boinc boinc   1160902 Nov 25 21:23 log.47556137._001444.job.log.tgz.1
[2025-11-25 21:24:21] -rw------- 1 boinc boinc      8565 Nov 25 21:23 heartbeat.json
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc      8192 Nov 25 21:24 boinc_mmap_file
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc        28 Nov 25 21:24 wrapper_checkpoint.txt
[2025-11-25 21:24:21] -rw------- 1 boinc boinc      4628 Nov 25 21:24 pilotlog.txt
[2025-11-25 21:24:21] -rw------- 1 boinc boinc   4108466 Nov 25 21:24 log.47556137._001444.job.log.1
[2025-11-25 21:24:21] -rw------- 1 boinc boinc       353 Nov 25 21:24 output.list
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc       620 Nov 25 21:24 runtime_log
[2025-11-25 21:24:21] -rw------- 1 boinc boinc   5294080 Nov 25 21:24 result.tar.gz
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc      8913 Nov 25 21:24 runtime_log.err
[2025-11-25 21:24:21] -rw------- 1 boinc boinc       668 Nov 25 21:24 nJfNDmQAog8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKpHKDmajUzmm.diag
[2025-11-25 21:24:21] -rw-r--r-- 1 boinc boinc      6083 Nov 25 21:24 stderr.txt
[2025-11-25 21:24:21] HITS file was successfully produced:
[2025-11-25 21:24:21] -rw------- 1 boinc boinc 917705752 Nov 25 21:23 shared/HITS.pool.root.1
[2025-11-25 21:24:21]  *** Contents of shared directory: ***
[2025-11-25 21:24:21] total 1300956
[2025-11-25 21:24:21] -rw-r--r-- 2 boinc boinc 408554081 Nov 25 13:17 ATLAS.root_0
[2025-11-25 21:24:21] -rw-r--r-- 2 boinc boinc    590104 Nov 25 13:17 input.tar.gz
[2025-11-25 21:24:21] -rw-r--r-- 2 boinc boinc     15847 Nov 25 13:17 start_atlas.sh
[2025-11-25 21:24:21] -rw------- 1 boinc boinc 917705752 Nov 25 21:23 HITS.pool.root.1
[2025-11-25 21:24:21] -rw------- 1 boinc boinc   5294080 Nov 25 21:24 result.tar.gz
21:24:23 (1399306): run_atlas exited; CPU time 86178.814481
21:24:23 (1399306): called boinc_finish(0)

</stderr_txt>
]]>

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