Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:54:58 (848): wrapper (7.7.26015): starting
14:54:58 (848): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 14:54:58] Arguments: --nthreads 8
[2025-11-22 14:54:58] Threads: 8
[2025-11-22 14:54:58] Checking for CVMFS
[2025-11-22 14:54:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 14:54:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 14:54:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 14:54:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 14:54:59] 2.11.2.0 2795 42104 84276 153183 3 82 11478693 20275201 1 130560 0 5370630 99.555 2870073 28257 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 14:54:59] CVMFS is ok
[2025-11-22 14:54:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 14:54:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 14:54:59] Further information can be found at the LHC@home message board.
[2025-11-22 14:54:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 14:54:59] Checking for apptainer binary...
[2025-11-22 14:54:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 14:54:59] Running /usr/bin/apptainer --version
[2025-11-22 14:54:59] apptainer version 1.3.2-1.el7
[2025-11-22 14:54:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 14:55:01] c-204-18.aglt2.org
[2025-11-22 14:55:01] apptainer works
[2025-11-22 14:55:01] Set ATHENA_PROC_NUMBER=8
[2025-11-22 14:55:01] Set ATHENA_CORE_NUMBER=8
[2025-11-22 14:55:01] Starting ATLAS job with PandaID=6895330496
[2025-11-22 14:55:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 03:24:39]  *** The last 200 lines of the pilot log: ***
[2025-11-23 03:24:39] 2025-11-23 08:23:41,349 | INFO     | extracted standard info from prmon json
[2025-11-23 03:24:39] 2025-11-23 08:23:41,349 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 03:24:39] 2025-11-23 08:23:41,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 03:24:39] 2025-11-23 08:23:41,363 | INFO     | fitting pss+swap vs Time
[2025-11-23 03:24:39] 2025-11-23 08:23:41,364 | INFO     | sum of square deviations: 123626419630.56012
[2025-11-23 03:24:39] 2025-11-23 08:23:41,375 | INFO     | sum of deviations: 754198280981.9419
[2025-11-23 03:24:39] 2025-11-23 08:23:41,375 | INFO     | mean x: 1763863768.1005435
[2025-11-23 03:24:39] 2025-11-23 08:23:41,376 | INFO     | mean y: 3261846.149456522
[2025-11-23 03:24:39] 2025-11-23 08:23:41,376 | INFO     | intersect: -10757407481.354979
[2025-11-23 03:24:39] 2025-11-23 08:23:41,377 | INFO     | chi2: 6.831502876464352
[2025-11-23 03:24:39] 2025-11-23 08:23:41,377 | INFO     | sum of square deviations: 121124070308.7442
[2025-11-23 03:24:39] 2025-11-23 08:23:41,388 | INFO     | sum of deviations: 1035422986526.8612
[2025-11-23 03:24:39] 2025-11-23 08:23:41,388 | INFO     | mean x: 1763863615.6046512
[2025-11-23 03:24:39] 2025-11-23 08:23:41,389 | INFO     | mean y: 3278976.452804378
[2025-11-23 03:24:39] 2025-11-23 08:23:41,389 | INFO     | intersect: -15075019895.440273
[2025-11-23 03:24:39] 2025-11-23 08:23:41,389 | INFO     | chi2: 3.623955809944795
[2025-11-23 03:24:39] 2025-11-23 08:23:41,390 | INFO     | current chi2=3.623955809944795 (change=46.95229036015022 %)
[2025-11-23 03:24:39] 2025-11-23 08:23:41,390 | INFO     | sum of square deviations: 118655721624.40344
[2025-11-23 03:24:39] 2025-11-23 08:23:41,401 | INFO     | sum of deviations: 1174876267141.0571
[2025-11-23 03:24:39] 2025-11-23 08:23:41,401 | INFO     | mean x: 1763863463.1088154
[2025-11-23 03:24:39] 2025-11-23 08:23:41,401 | INFO     | mean y: 3287584.100550964
[2025-11-23 03:24:39] 2025-11-23 08:23:41,402 | INFO     | intersect: -17461705194.28037
[2025-11-23 03:24:39] 2025-11-23 08:23:41,402 | INFO     | chi2: 2.704848792923645
[2025-11-23 03:24:39] 2025-11-23 08:23:41,402 | INFO     | current chi2=2.704848792923645 (change=25.361981912112526 %)
[2025-11-23 03:24:39] 2025-11-23 08:23:41,403 | INFO     | sum of square deviations: 116221096851.2626
[2025-11-23 03:24:39] 2025-11-23 08:23:41,414 | INFO     | sum of deviations: 1163863781220.7866
[2025-11-23 03:24:39] 2025-11-23 08:23:41,414 | INFO     | mean x: 1763863310.6116505
[2025-11-23 03:24:39] 2025-11-23 08:23:41,414 | INFO     | mean y: 3286892.5492371707
[2025-11-23 03:24:39] 2025-11-23 08:23:41,415 | INFO     | intersect: -17660430606.798973
[2025-11-23 03:24:39] 2025-11-23 08:23:41,415 | INFO     | chi2: 2.6973051115156568
[2025-11-23 03:24:39] 2025-11-23 08:23:41,415 | INFO     | current chi2=2.6973051115156568 (change=0.27889475477238934 %)
[2025-11-23 03:24:39] 2025-11-23 08:23:41,416 | INFO     | right removable region: 720
[2025-11-23 03:24:39] 2025-11-23 08:23:41,416 | INFO     | sum of square deviations: 121123800688.7443
[2025-11-23 03:24:39] 2025-11-23 08:23:41,427 | INFO     | sum of deviations: 513270975230.8379
[2025-11-23 03:24:39] 2025-11-23 08:23:41,428 | INFO     | mean x: 1763863920.6046512
[2025-11-23 03:24:39] 2025-11-23 08:23:41,428 | INFO     | mean y: 3276503.6949384403
[2025-11-23 03:24:39] 2025-11-23 08:23:41,428 | INFO     | intersect: -7471226026.404164
[2025-11-23 03:24:39] 2025-11-23 08:23:41,429 | INFO     | chi2: 4.324694727699879
[2025-11-23 03:24:39] 2025-11-23 08:23:41,429 | INFO     | current chi2=4.324694727699879 (change=36.69482680598494 %)
[2025-11-23 03:24:39] 2025-11-23 08:23:41,430 | INFO     | sum of square deviations: 118655316402.04399
[2025-11-23 03:24:39] 2025-11-23 08:23:41,441 | INFO     | sum of deviations: 464983416712.75433
[2025-11-23 03:24:39] 2025-11-23 08:23:41,441 | INFO     | mean x: 1763864073.1046832
[2025-11-23 03:24:39] 2025-11-23 08:23:41,441 | INFO     | mean y: 3279485.0426997244
[2025-11-23 03:24:39] 2025-11-23 08:23:41,441 | INFO     | intersect: -6908905895.2574
[2025-11-23 03:24:39] 2025-11-23 08:23:41,442 | INFO     | chi2: 4.275658590372444
[2025-11-23 03:24:39] 2025-11-23 08:23:41,442 | INFO     | current chi2=4.275658590372444 (change=1.1338635537291455 %)
[2025-11-23 03:24:39] 2025-11-23 08:23:41,442 | INFO     | left removable region: 20
[2025-11-23 03:24:39] 2025-11-23 08:23:41,443 | INFO     | sum of square deviations: 106358716764.08417
[2025-11-23 03:24:39] 2025-11-23 08:23:41,453 | INFO     | sum of deviations: 819959132587.8785
[2025-11-23 03:24:39] 2025-11-23 08:23:41,453 | INFO     | mean x: 1763863890.112857
[2025-11-23 03:24:39] 2025-11-23 08:23:41,453 | INFO     | mean y: 3308527.7357142856
[2025-11-23 03:24:39] 2025-11-23 08:23:41,454 | INFO     | intersect: -13594978000.56145
[2025-11-23 03:24:39] 2025-11-23 08:23:41,454 | INFO     | chi2: 0.09797271735149282
[2025-11-23 03:24:39] 2025-11-23 08:23:41,455 | INFO     | current memory leak: 7.71 B/s (using 700 data points, chi2=0.10)
[2025-11-23 03:24:39] 2025-11-23 08:23:41,455 | INFO     | could have reported an average CPU frequency of 2168 MHz (28 samples)
[2025-11-23 03:24:39] 2025-11-23 08:23:41,455 | INFO     | ..............................
[2025-11-23 03:24:39] 2025-11-23 08:23:41,455 | INFO     | . Timing measurements:
[2025-11-23 03:24:39] 2025-11-23 08:23:41,456 | INFO     | . get job = 0 s
[2025-11-23 03:24:39] 2025-11-23 08:23:41,456 | INFO     | . initial setup = 2 s
[2025-11-23 03:24:39] 2025-11-23 08:23:41,456 | INFO     | . payload setup = 8 s
[2025-11-23 03:24:39] 2025-11-23 08:23:41,456 | INFO     | . stage-in = 0 s
[2025-11-23 03:24:39] 2025-11-23 08:23:41,456 | INFO     | . payload execution = 44862 s
[2025-11-23 03:24:39] 2025-11-23 08:23:41,456 | INFO     | . stage-out = 3 s
[2025-11-23 03:24:39] 2025-11-23 08:23:41,456 | INFO     | . log creation = 0 s
[2025-11-23 03:24:39] 2025-11-23 08:23:41,456 | INFO     | ..............................
[2025-11-23 03:24:39] 2025-11-23 08:23:41,579 | INFO     | 
[2025-11-23 03:24:39] 2025-11-23 08:23:41,580 | INFO     | job summary report
[2025-11-23 03:24:39] 2025-11-23 08:23:41,580 | INFO     | --------------------------------------------------
[2025-11-23 03:24:39] 2025-11-23 08:23:41,580 | INFO     | PanDA job id: 6895330496
[2025-11-23 03:24:39] 2025-11-23 08:23:41,580 | INFO     | task id: 47556137
[2025-11-23 03:24:39] 2025-11-23 08:23:41,581 | INFO     | errors: (none)
[2025-11-23 03:24:39] 2025-11-23 08:23:41,581 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 03:24:39] 2025-11-23 08:23:41,581 | INFO     | pilot state: finished 
[2025-11-23 03:24:39] 2025-11-23 08:23:41,581 | INFO     | transexitcode: 0
[2025-11-23 03:24:39] 2025-11-23 08:23:41,582 | INFO     | exeerrorcode: 0
[2025-11-23 03:24:39] 2025-11-23 08:23:41,582 | INFO     | exeerrordiag: 
[2025-11-23 03:24:39] 2025-11-23 08:23:41,582 | INFO     | exitcode: 0
[2025-11-23 03:24:39] 2025-11-23 08:23:41,582 | INFO     | exitmsg: OK
[2025-11-23 03:24:39] 2025-11-23 08:23:41,582 | INFO     | cpuconsumptiontime: 347657 s
[2025-11-23 03:24:39] 2025-11-23 08:23:41,583 | INFO     | nevents: 1000
[2025-11-23 03:24:39] 2025-11-23 08:23:41,583 | INFO     | neventsw: 0
[2025-11-23 03:24:39] 2025-11-23 08:23:41,583 | INFO     | pid: 12101
[2025-11-23 03:24:39] 2025-11-23 08:23:41,583 | INFO     | pgrp: 12101
[2025-11-23 03:24:39] 2025-11-23 08:23:41,583 | INFO     | corecount: 8
[2025-11-23 03:24:39] 2025-11-23 08:23:41,583 | INFO     | event service: False
[2025-11-23 03:24:39] 2025-11-23 08:23:41,584 | INFO     | sizes: {0: 2298636, 1: 2298835, 6: 2299097, 11: 2299125, 44875: 2345023, 44879: 2354201, 44886: 2354391}
[2025-11-23 03:24:39] 2025-11-23 08:23:41,584 | INFO     | --------------------------------------------------
[2025-11-23 03:24:39] 2025-11-23 08:23:41,584 | INFO     | 
[2025-11-23 03:24:39] 2025-11-23 08:23:41,584 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 03:24:39] 2025-11-23 08:23:41,612 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,612 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,612 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,613 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,615 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,616 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 03:24:39] 2025-11-23 08:23:41,616 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,616 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 03:24:39] 2025-11-23 08:23:41,616 | INFO     | job 6895330496 has completed (purged errors)
[2025-11-23 03:24:39] 2025-11-23 08:23:41,616 | INFO     | overall cleanup function is called
[2025-11-23 03:24:39] 2025-11-23 08:23:42,631 | INFO     | --- collectZombieJob: --- 10, [12101]
[2025-11-23 03:24:39] 2025-11-23 08:23:42,631 | INFO     | zombie collector waiting for pid 12101
[2025-11-23 03:24:39] 2025-11-23 08:23:42,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 03:24:39] 2025-11-23 08:23:42,632 | INFO     | collected zombie processes
[2025-11-23 03:24:39] 2025-11-23 08:23:42,632 | INFO     | will attempt to kill all subprocesses of pid=12101
[2025-11-23 03:24:39] 2025-11-23 08:23:42,726 | INFO     | process IDs to be killed: [12101] (in reverse order)
[2025-11-23 03:24:39] 2025-11-23 08:23:42,786 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 03:24:39] 2025-11-23 08:23:42,786 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 03:24:39] 2025-11-23 08:23:42,792 | INFO     | did not find any defunct processes belonging to 12101
[2025-11-23 03:24:39] 2025-11-23 08:23:42,795 | INFO     | did not find any defunct processes belonging to 12101
[2025-11-23 03:24:39] 2025-11-23 08:23:42,798 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:24:39] 2025-11-23 08:23:42,798 | INFO     | ready for new job
[2025-11-23 03:24:39] 2025-11-23 08:23:42,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 03:24:39] 2025-11-23 08:23:42,801 | INFO     | ***************************************
[2025-11-23 03:24:39] 2025-11-23 08:23:42,802 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 03:24:39] 2025-11-23 08:23:42,802 | INFO     | ***************************************
[2025-11-23 03:24:39] 2025-11-23 08:23:42,802 | INFO     | 
[2025-11-23 03:24:39] 2025-11-23 08:23:42,802 | INFO     | architecture information:
[2025-11-23 03:24:39] 2025-11-23 08:23:42,803 | INFO     | executing command: cat /etc/os-release
[2025-11-23 03:24:39] 2025-11-23 08:23:42,822 | INFO     | cat /etc/os-release:
[2025-11-23 03:24:39] NAME="CentOS Linux"
[2025-11-23 03:24:39] VERSION="7 (Core)"
[2025-11-23 03:24:39] ID="centos"
[2025-11-23 03:24:39] ID_LIKE="rhel fedora"
[2025-11-23 03:24:39] VERSION_ID="7"
[2025-11-23 03:24:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 03:24:39] ANSI_COLOR="0;31"
[2025-11-23 03:24:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 03:24:39] HOME_URL="https://www.centos.org/"
[2025-11-23 03:24:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 03:24:39] 
[2025-11-23 03:24:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 03:24:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 03:24:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 03:24:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 03:24:39] 
[2025-11-23 03:24:39] 2025-11-23 08:23:42,822 | INFO     | ***************************************
[2025-11-23 03:24:39] 2025-11-23 08:23:43,325 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 03:24:39] 2025-11-23 08:23:43,344 | INFO     | sufficient remaining disk space (17432576000 B)
[2025-11-23 03:24:39] 2025-11-23 08:23:43,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 03:24:39] 2025-11-23 08:23:43,346 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 03:24:39] 2025-11-23 08:23:43,346 | INFO     | update_server=False
[2025-11-23 03:24:39] 2025-11-23 08:23:43,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 03:24:39] 2025-11-23 08:23:43,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 03:24:39] 2025-11-23 08:23:43,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:24:39] 2025-11-23 08:23:43,645 | INFO     | all payload control threads have been joined
[2025-11-23 03:24:39] 2025-11-23 08:23:44,089 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:24:39] 2025-11-23 08:23:44,089 | INFO     | aborting loop
[2025-11-23 03:24:39] 2025-11-23 08:23:44,352 | INFO     | [job] retrieve thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:44,353 | INFO     | [job] queue monitor thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:44,361 | INFO     | all data control threads have been joined
[2025-11-23 03:24:39] 2025-11-23 08:23:44,465 | INFO     | all job control threads have been joined
[2025-11-23 03:24:39] 2025-11-23 08:23:44,635 | INFO     | [data] copytool_in thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:44,642 | INFO     | [job] validate thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:44,650 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:44,651 | INFO     | [payload] control thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:44,794 | INFO     | [payload] failed_post thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:45,018 | INFO     | [payload] validate_post thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:45,095 | INFO     | [job] job monitor thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:45,352 | INFO     | [data] copytool_out thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:45,367 | INFO     | [data] control thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:45,420 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:45,471 | INFO     | [job] control thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:45,592 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:45,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 03:24:39] 2025-11-23 08:23:45,816 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:23:49,788 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 03:24:39] 2025-11-23 08:24:13,560 | INFO     | PID=4754 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 03:24:39] 2025-11-23 08:24:13,560 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 03:24:39] 2025-11-23 08:24:13,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 03:24:39] 2025-11-23 08:24:13,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 03:24:39] 2025-11-23 08:24:32,597 | INFO     | [monitor] cgroup control has ended
[2025-11-23 03:24:39] 2025-11-23 08:24:33,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333750908736)>', '<ExcThread(monitor, started 140333442635520)>']
[2025-11-23 03:24:39] 2025-11-23 08:24:34,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 03:24:39] 2025-11-23 08:24:34,666 | INFO     | [monitor] control thread has ended
[2025-11-23 03:24:39] 2025-11-23 08:24:38,891 | INFO     | all workflow threads have been joined
[2025-11-23 03:24:39] 2025-11-23 08:24:38,891 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 03:24:39] 2025-11-23 08:24:38,892 | INFO     | traces error code: 0
[2025-11-23 03:24:39] 2025-11-23 08:24:38,892 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 03:24:39] 2025-11-23 08:24:39,012 [wrapper] ==== pilot stdout END ====
[2025-11-23 03:24:39] 2025-11-23 08:24:39,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 03:24:39] 2025-11-23 08:24:39,022 [wrapper] pilotpid: 4754
[2025-11-23 03:24:39] 2025-11-23 08:24:39,026 [wrapper] Pilot exit status: 0
[2025-11-23 03:24:39] 2025-11-23 08:24:39,041 [wrapper] pandaids: 6895330496
[2025-11-23 03:24:39] 2025-11-23 08:24:39,100 [wrapper] cleanup supervisor_pilot  2354 4755
[2025-11-23 03:24:39] 2025-11-23 08:24:39,105 [wrapper] Test setup, not cleaning
[2025-11-23 03:24:39] 2025-11-23 08:24:39,111 [wrapper] apfmon messages muted
[2025-11-23 03:24:39] 2025-11-23 08:24:39,116 [wrapper] ==== wrapper stdout END ====
[2025-11-23 03:24:39] 2025-11-23 08:24:39,121 [wrapper] ==== wrapper stderr END ====
[2025-11-23 03:24:39]  *** Error codes and diagnostics ***
[2025-11-23 03:24:39]     "exeErrorCode": 0,
[2025-11-23 03:24:39]     "exeErrorDiag": "",
[2025-11-23 03:24:39]     "pilotErrorCode": 0,
[2025-11-23 03:24:39]     "pilotErrorDiag": "",
[2025-11-23 03:24:39]  *** Listing of results directory ***
[2025-11-23 03:24:39] total 1323488
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 16:26 pilot3.tar.gz
[2025-11-23 03:24:39] -rwx------ 1 boincer umatlas     36292 Nov 21 16:35 runpilot2-wrapper.sh
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 16:35 queuedata.json
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas       100 Nov 22 14:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 03:24:39] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 14:54 run_atlas
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas       105 Nov 22 14:54 job.xml
[2025-11-23 03:24:39] -rw-r--r-- 2 boincer umatlas 408650092 Nov 22 14:54 EVNT.47483658._000142.pool.root.1
[2025-11-23 03:24:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 14:54 start_atlas.sh
[2025-11-23 03:24:39] drwxrwx--x 2 boincer umatlas      4096 Nov 22 14:54 shared
[2025-11-23 03:24:39] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 14:54 input.tar.gz
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas         0 Nov 22 14:54 boinc_lockfile
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas      2786 Nov 22 14:55 pandaJob.out
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas        57 Nov 22 14:55 setup.sh.local
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas    989768 Nov 22 14:55 agis_schedconf.cvmfs.json
[2025-11-23 03:24:39] drwx------ 5 boincer umatlas      4096 Nov 22 14:55 pilot3
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas       533 Nov 23 03:12 boinc_task_state.xml
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas      5910 Nov 23 03:20 init_data.xml
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas 926374831 Nov 23 03:22 HITS.47556137._001416.pool.root.1
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas      1064 Nov 23 03:23 memory_monitor_summary.json
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas        95 Nov 23 03:23 pilot_heartbeat.json
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas   1526164 Nov 23 03:23 agis_ddmendpoints.agis.ALL.json
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas   1971887 Nov 23 03:23 log.47556137._001416.job.log.tgz.1
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas      8670 Nov 23 03:23 heartbeat.json
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas        29 Nov 23 03:24 wrapper_checkpoint.txt
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 03:24 boinc_mmap_file
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas      4745 Nov 23 03:24 pilotlog.txt
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas   6177773 Nov 23 03:24 log.47556137._001416.job.log.1
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas       353 Nov 23 03:24 output.list
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas       620 Nov 23 03:24 runtime_log
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas   8171520 Nov 23 03:24 result.tar.gz
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas       668 Nov 23 03:24 yz2MDmXyng8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0iJKDmvGVyin.diag
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 03:24 runtime_log.err
[2025-11-23 03:24:39] -rw-r--r-- 1 boincer umatlas     21074 Nov 23 03:24 stderr.txt
[2025-11-23 03:24:39] HITS file was successfully produced:
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas 926374831 Nov 23 03:22 shared/HITS.pool.root.1
[2025-11-23 03:24:39]  *** Contents of shared directory: ***
[2025-11-23 03:24:39] total 1312320
[2025-11-23 03:24:39] -rw-r--r-- 2 boincer umatlas 408650092 Nov 22 14:54 ATLAS.root_0
[2025-11-23 03:24:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 14:54 start_atlas.sh
[2025-11-23 03:24:39] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 14:54 input.tar.gz
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas 926374831 Nov 23 03:22 HITS.pool.root.1
[2025-11-23 03:24:39] -rw------- 1 boincer umatlas   8171520 Nov 23 03:24 result.tar.gz
03:24:41 (848): run_atlas exited; CPU time 344766.294506
03:24:41 (848): called boinc_finish(0)

</stderr_txt>
]]>

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