Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:02:09 (7557): wrapper (7.7.26015): starting
15:02:09 (7557): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 15:02:09] Arguments: --nthreads 8
[2025-11-22 15:02:09] Threads: 8
[2025-11-22 15:02:09] Checking for CVMFS
[2025-11-22 15:02:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 15:02:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 15:02:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 15:02:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 15:02:09] 2.11.2.0 6956 112350 139052 153183 0 90 12448724 18432000 1745 130560 0 81647824 99.972 4827596 30855 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 15:02:09] CVMFS is ok
[2025-11-22 15:02:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 15:02:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 15:02:09] Further information can be found at the LHC@home message board.
[2025-11-22 15:02:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 15:02:09] Checking for apptainer binary...
[2025-11-22 15:02:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 15:02:09] Running /usr/bin/apptainer --version
[2025-11-22 15:02:09] apptainer version 1.3.2-1.el7
[2025-11-22 15:02:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 15:02:10] c-206-16.aglt2.org
[2025-11-22 15:02:10] apptainer works
[2025-11-22 15:02:10] Set ATHENA_PROC_NUMBER=8
[2025-11-22 15:02:10] Set ATHENA_CORE_NUMBER=8
[2025-11-22 15:02:10] Starting ATLAS job with PandaID=6895330866
[2025-11-22 15:02:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 10:24:23]  *** The last 200 lines of the pilot log: ***
[2025-11-23 10:24:23] 2025-11-23 15:23:22,758 | INFO     | monitor loop #4976: job 0:6895330866 is in state 'finished'
[2025-11-23 10:24:23] 2025-11-23 15:23:22,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,036 | INFO     | time since job start (69662s) is within the limit (172800.0s)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,625 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 10:24:23] 2025-11-23 15:23:23,629 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2172.8333333333335
[2025-11-23 10:24:23] 2025-11-23 15:23:23,632 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895330866/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,632 | INFO     | extracted standard info from prmon json
[2025-11-23 10:24:23] 2025-11-23 15:23:23,633 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 10:24:23] 2025-11-23 15:23:23,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 10:24:23] 2025-11-23 15:23:23,649 | INFO     | fitting pss+swap vs Time
[2025-11-23 10:24:23] 2025-11-23 15:23:23,650 | INFO     | sum of square deviations: 461822813922.14087
[2025-11-23 10:24:23] 2025-11-23 15:23:23,676 | INFO     | sum of deviations: 2402664132356.996
[2025-11-23 10:24:23] 2025-11-23 15:23:23,676 | INFO     | mean x: 1763876567.2110333
[2025-11-23 10:24:23] 2025-11-23 15:23:23,676 | INFO     | mean y: 2868172.825744308
[2025-11-23 10:24:23] 2025-11-23 15:23:23,676 | INFO     | intersect: -9173817850.869532
[2025-11-23 10:24:23] 2025-11-23 15:23:23,677 | INFO     | chi2: 5.39000061071398
[2025-11-23 10:24:23] 2025-11-23 15:23:23,678 | INFO     | sum of square deviations: 455783590202.10126
[2025-11-23 10:24:23] 2025-11-23 15:23:23,703 | INFO     | sum of deviations: 2734197008110.3013
[2025-11-23 10:24:23] 2025-11-23 15:23:23,703 | INFO     | mean x: 1763876414.71416
[2025-11-23 10:24:23] 2025-11-23 15:23:23,703 | INFO     | mean y: 2876538.105540897
[2025-11-23 10:24:23] 2025-11-23 15:23:23,704 | INFO     | intersect: -10578429413.803095
[2025-11-23 10:24:23] 2025-11-23 15:23:23,705 | INFO     | chi2: 2.784255688116268
[2025-11-23 10:24:23] 2025-11-23 15:23:23,705 | INFO     | current chi2=2.784255688116268 (change=48.34405616611879 %)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,706 | INFO     | sum of square deviations: 449797251194.5409
[2025-11-23 10:24:23] 2025-11-23 15:23:23,731 | INFO     | sum of deviations: 2816032060031.2383
[2025-11-23 10:24:23] 2025-11-23 15:23:23,731 | INFO     | mean x: 1763876262.2173145
[2025-11-23 10:24:23] 2025-11-23 15:23:23,731 | INFO     | mean y: 2878621.742932862
[2025-11-23 10:24:23] 2025-11-23 15:23:23,731 | INFO     | intersect: -11040168197.997858
[2025-11-23 10:24:23] 2025-11-23 15:23:23,732 | INFO     | chi2: 2.5289755678731574
[2025-11-23 10:24:23] 2025-11-23 15:23:23,732 | INFO     | current chi2=2.5289755678731574 (change=9.168702477028047 %)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,732 | INFO     | right removable region: 1131
[2025-11-23 10:24:23] 2025-11-23 15:23:23,733 | INFO     | sum of square deviations: 455783094882.1012
[2025-11-23 10:24:23] 2025-11-23 15:23:23,758 | INFO     | sum of deviations: 2095934593868.518
[2025-11-23 10:24:23] 2025-11-23 15:23:23,758 | INFO     | mean x: 1763876719.71416
[2025-11-23 10:24:23] 2025-11-23 15:23:23,759 | INFO     | mean y: 2875909.6446789796
[2025-11-23 10:24:23] 2025-11-23 15:23:23,759 | INFO     | intersect: -8108373229.870991
[2025-11-23 10:24:23] 2025-11-23 15:23:23,760 | INFO     | chi2: 3.2697646801424747
[2025-11-23 10:24:23] 2025-11-23 15:23:23,760 | INFO     | current chi2=3.2697646801424747 (change=39.33646920850072 %)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,761 | INFO     | sum of square deviations: 449796537740.2649
[2025-11-23 10:24:23] 2025-11-23 15:23:23,786 | INFO     | sum of deviations: 2002512432726.0525
[2025-11-23 10:24:23] 2025-11-23 15:23:23,786 | INFO     | mean x: 1763876872.2137809
[2025-11-23 10:24:23] 2025-11-23 15:23:23,786 | INFO     | mean y: 2878289.098939929
[2025-11-23 10:24:23] 2025-11-23 15:23:23,786 | INFO     | intersect: -7849973100.445769
[2025-11-23 10:24:23] 2025-11-23 15:23:23,787 | INFO     | chi2: 3.177454355355594
[2025-11-23 10:24:23] 2025-11-23 15:23:23,787 | INFO     | current chi2=3.177454355355594 (change=2.8231488751312392 %)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,788 | INFO     | left removable region: 20
[2025-11-23 10:24:23] 2025-11-23 15:23:23,789 | INFO     | sum of square deviations: 425225791230.38226
[2025-11-23 10:24:23] 2025-11-23 15:23:23,813 | INFO     | sum of deviations: 2266898902318.813
[2025-11-23 10:24:23] 2025-11-23 15:23:23,813 | INFO     | mean x: 1763876841.719172
[2025-11-23 10:24:23] 2025-11-23 15:23:23,813 | INFO     | mean y: 2892609.5346534653
[2025-11-23 10:24:23] 2025-11-23 15:23:23,814 | INFO     | intersect: -9400418663.634123
[2025-11-23 10:24:23] 2025-11-23 15:23:23,815 | INFO     | chi2: 0.22970183014451204
[2025-11-23 10:24:23] 2025-11-23 15:23:23,815 | INFO     | current memory leak: 5.33 B/s (using 1111 data points, chi2=0.23)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,815 | INFO     | could have reported an average CPU frequency of 2623 MHz (41 samples)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,816 | INFO     | ..............................
[2025-11-23 10:24:23] 2025-11-23 15:23:23,816 | INFO     | . Timing measurements:
[2025-11-23 10:24:23] 2025-11-23 15:23:23,816 | INFO     | . get job = 0 s
[2025-11-23 10:24:23] 2025-11-23 15:23:23,816 | INFO     | . initial setup = 2 s
[2025-11-23 10:24:23] 2025-11-23 15:23:23,816 | INFO     | . payload setup = 5 s
[2025-11-23 10:24:23] 2025-11-23 15:23:23,816 | INFO     | . stage-in = 0 s
[2025-11-23 10:24:23] 2025-11-23 15:23:23,816 | INFO     | . payload execution = 69629 s
[2025-11-23 10:24:23] 2025-11-23 15:23:23,816 | INFO     | . stage-out = 3 s
[2025-11-23 10:24:23] 2025-11-23 15:23:23,816 | INFO     | . log creation = 0 s
[2025-11-23 10:24:23] 2025-11-23 15:23:23,817 | INFO     | ..............................
[2025-11-23 10:24:23] 2025-11-23 15:23:23,899 | INFO     | 
[2025-11-23 10:24:23] 2025-11-23 15:23:23,899 | INFO     | job summary report
[2025-11-23 10:24:23] 2025-11-23 15:23:23,899 | INFO     | --------------------------------------------------
[2025-11-23 10:24:23] 2025-11-23 15:23:23,899 | INFO     | PanDA job id: 6895330866
[2025-11-23 10:24:23] 2025-11-23 15:23:23,899 | INFO     | task id: 47556137
[2025-11-23 10:24:23] 2025-11-23 15:23:23,899 | INFO     | errors: (none)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,900 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 10:24:23] 2025-11-23 15:23:23,900 | INFO     | pilot state: finished 
[2025-11-23 10:24:23] 2025-11-23 15:23:23,900 | INFO     | transexitcode: 0
[2025-11-23 10:24:23] 2025-11-23 15:23:23,900 | INFO     | exeerrorcode: 0
[2025-11-23 10:24:23] 2025-11-23 15:23:23,900 | INFO     | exeerrordiag: 
[2025-11-23 10:24:23] 2025-11-23 15:23:23,900 | INFO     | exitcode: 0
[2025-11-23 10:24:23] 2025-11-23 15:23:23,900 | INFO     | exitmsg: OK
[2025-11-23 10:24:23] 2025-11-23 15:23:23,900 | INFO     | cpuconsumptiontime: 543554 s
[2025-11-23 10:24:23] 2025-11-23 15:23:23,900 | INFO     | nevents: 1000
[2025-11-23 10:24:23] 2025-11-23 15:23:23,901 | INFO     | neventsw: 0
[2025-11-23 10:24:23] 2025-11-23 15:23:23,901 | INFO     | pid: 19642
[2025-11-23 10:24:23] 2025-11-23 15:23:23,901 | INFO     | pgrp: 19642
[2025-11-23 10:24:23] 2025-11-23 15:23:23,901 | INFO     | corecount: 8
[2025-11-23 10:24:23] 2025-11-23 15:23:23,901 | INFO     | event service: False
[2025-11-23 10:24:23] 2025-11-23 15:23:23,901 | INFO     | sizes: {0: 2298807, 1: 2298807, 4: 2299097, 12: 2299125, 69638: 2355435, 69642: 2364613, 69647: 2364899}
[2025-11-23 10:24:23] 2025-11-23 15:23:23,901 | INFO     | --------------------------------------------------
[2025-11-23 10:24:23] 2025-11-23 15:23:23,901 | INFO     | 
[2025-11-23 10:24:23] 2025-11-23 15:23:23,901 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 10:24:23] 2025-11-23 15:23:23,922 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,922 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,924 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 10:24:23] 2025-11-23 15:23:23,924 | INFO     | job 6895330866 has completed (purged errors)
[2025-11-23 10:24:23] 2025-11-23 15:23:23,925 | INFO     | overall cleanup function is called
[2025-11-23 10:24:23] 2025-11-23 15:23:24,937 | INFO     | --- collectZombieJob: --- 10, [19642]
[2025-11-23 10:24:23] 2025-11-23 15:23:24,938 | INFO     | zombie collector waiting for pid 19642
[2025-11-23 10:24:23] 2025-11-23 15:23:24,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 10:24:23] 2025-11-23 15:23:24,938 | INFO     | collected zombie processes
[2025-11-23 10:24:23] 2025-11-23 15:23:24,938 | INFO     | will attempt to kill all subprocesses of pid=19642
[2025-11-23 10:24:23] 2025-11-23 15:23:25,088 | INFO     | process IDs to be killed: [19642] (in reverse order)
[2025-11-23 10:24:23] 2025-11-23 15:23:25,141 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 10:24:23] 2025-11-23 15:23:25,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 10:24:23] 2025-11-23 15:23:25,145 | INFO     | did not find any defunct processes belonging to 19642
[2025-11-23 10:24:23] 2025-11-23 15:23:25,147 | INFO     | did not find any defunct processes belonging to 19642
[2025-11-23 10:24:23] 2025-11-23 15:23:25,149 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 10:24:23] 2025-11-23 15:23:25,149 | INFO     | ready for new job
[2025-11-23 10:24:23] 2025-11-23 15:23:25,149 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 10:24:23] 2025-11-23 15:23:25,153 | INFO     | ***************************************
[2025-11-23 10:24:23] 2025-11-23 15:23:25,153 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 10:24:23] 2025-11-23 15:23:25,153 | INFO     | ***************************************
[2025-11-23 10:24:23] 2025-11-23 15:23:25,153 | INFO     | 
[2025-11-23 10:24:23] 2025-11-23 15:23:25,154 | INFO     | architecture information:
[2025-11-23 10:24:23] 2025-11-23 15:23:25,155 | INFO     | executing command: cat /etc/os-release
[2025-11-23 10:24:23] 2025-11-23 15:23:25,164 | INFO     | cat /etc/os-release:
[2025-11-23 10:24:23] NAME="CentOS Linux"
[2025-11-23 10:24:23] VERSION="7 (Core)"
[2025-11-23 10:24:23] ID="centos"
[2025-11-23 10:24:23] ID_LIKE="rhel fedora"
[2025-11-23 10:24:23] VERSION_ID="7"
[2025-11-23 10:24:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 10:24:23] ANSI_COLOR="0;31"
[2025-11-23 10:24:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 10:24:23] HOME_URL="https://www.centos.org/"
[2025-11-23 10:24:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 10:24:23] 
[2025-11-23 10:24:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 10:24:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 10:24:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 10:24:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 10:24:23] 
[2025-11-23 10:24:23] 2025-11-23 15:23:25,165 | INFO     | ***************************************
[2025-11-23 10:24:23] 2025-11-23 15:23:25,668 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 10:24:23] 2025-11-23 15:23:25,683 | INFO     | sufficient remaining disk space (25755123712 B)
[2025-11-23 10:24:23] 2025-11-23 15:23:25,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 10:24:23] 2025-11-23 15:23:25,683 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 10:24:23] 2025-11-23 15:23:25,683 | INFO     | update_server=False
[2025-11-23 10:24:23] 2025-11-23 15:23:25,683 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 10:24:23] 2025-11-23 15:23:25,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 10:24:23] 2025-11-23 15:23:25,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 10:24:23] 2025-11-23 15:23:26,266 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 10:24:23] 2025-11-23 15:23:26,266 | INFO     | aborting loop
[2025-11-23 10:24:23] 2025-11-23 15:23:26,403 | INFO     | all payload control threads have been joined
[2025-11-23 10:24:23] 2025-11-23 15:23:26,412 | INFO     | all data control threads have been joined
[2025-11-23 10:24:23] 2025-11-23 15:23:26,689 | INFO     | [job] retrieve thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:26,689 | INFO     | [job] queue monitor thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:26,784 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 10:24:23] 2025-11-23 15:23:26,871 | INFO     | all job control threads have been joined
[2025-11-23 10:24:23] 2025-11-23 15:23:27,209 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:27,215 | INFO     | [payload] validate_post thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:27,272 | INFO     | [job] job monitor thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:27,408 | INFO     | [payload] control thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:27,417 | INFO     | [data] control thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:27,590 | INFO     | [job] validate thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:27,592 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:27,595 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:27,660 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:27,666 | INFO     | [data] copytool_in thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:27,876 | INFO     | [job] control thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:28,116 | INFO     | [payload] failed_post thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:28,790 | INFO     | [data] copytool_out thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:29,690 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 10:24:23] 2025-11-23 15:23:56,324 | INFO     | PID=11966 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 10:24:23] 2025-11-23 15:23:56,324 | INFO     | .. there are 3 such processes running
[2025-11-23 10:24:23] 2025-11-23 15:23:56,325 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 10:24:23] 2025-11-23 15:23:56,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 10:24:23] 2025-11-23 15:23:56,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 10:24:23] 2025-11-23 15:24:16,519 | INFO     | [monitor] cgroup control has ended
[2025-11-23 10:24:23] 2025-11-23 15:24:18,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327293462336)>', '<ExcThread(monitor, started 140327066457856)>']
[2025-11-23 10:24:23] 2025-11-23 15:24:19,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 10:24:23] 2025-11-23 15:24:19,435 | INFO     | [monitor] control thread has ended
[2025-11-23 10:24:23] 2025-11-23 15:24:23,590 | INFO     | all workflow threads have been joined
[2025-11-23 10:24:23] 2025-11-23 15:24:23,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 10:24:23] 2025-11-23 15:24:23,591 | INFO     | traces error code: 0
[2025-11-23 10:24:23] 2025-11-23 15:24:23,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 10:24:23] 2025-11-23 15:24:23,740 [wrapper] ==== pilot stdout END ====
[2025-11-23 10:24:23] 2025-11-23 15:24:23,742 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 10:24:23] 2025-11-23 15:24:23,745 [wrapper] pilotpid: 11966
[2025-11-23 10:24:23] 2025-11-23 15:24:23,747 [wrapper] Pilot exit status: 0
[2025-11-23 10:24:23] 2025-11-23 15:24:23,754 [wrapper] pandaids: 6895330866
[2025-11-23 10:24:23] 2025-11-23 15:24:23,786 [wrapper] cleanup supervisor_pilot 29156 11967
[2025-11-23 10:24:23] 2025-11-23 15:24:23,788 [wrapper] Test setup, not cleaning
[2025-11-23 10:24:23] 2025-11-23 15:24:23,791 [wrapper] apfmon messages muted
[2025-11-23 10:24:23] 2025-11-23 15:24:23,793 [wrapper] ==== wrapper stdout END ====
[2025-11-23 10:24:23] 2025-11-23 15:24:23,796 [wrapper] ==== wrapper stderr END ====
[2025-11-23 10:24:23]  *** Error codes and diagnostics ***
[2025-11-23 10:24:23]     "exeErrorCode": 0,
[2025-11-23 10:24:23]     "exeErrorDiag": "",
[2025-11-23 10:24:23]     "pilotErrorCode": 0,
[2025-11-23 10:24:23]     "pilotErrorDiag": "",
[2025-11-23 10:24:23]  *** Listing of results directory ***
[2025-11-23 10:24:23] total 1323220
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 16:26 pilot3.tar.gz
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 16:47 queuedata.json
[2025-11-23 10:24:23] -rwx------ 1 boincer umatlas     36292 Nov 21 16:48 runpilot2-wrapper.sh
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas       100 Nov 22 15:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 10:24:23] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 15:02 run_atlas
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas       105 Nov 22 15:02 job.xml
[2025-11-23 10:24:23] -rw-r--r-- 2 boincer umatlas 407969210 Nov 22 15:02 EVNT.47483658._000146.pool.root.1
[2025-11-23 10:24:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 15:02 start_atlas.sh
[2025-11-23 10:24:23] drwxrwx--x 2 boincer umatlas      4096 Nov 22 15:02 shared
[2025-11-23 10:24:23] -rw-r--r-- 2 boincer umatlas    590105 Nov 22 15:02 input.tar.gz
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas         0 Nov 22 15:02 boinc_lockfile
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas      2786 Nov 22 15:02 pandaJob.out
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas        57 Nov 22 15:02 setup.sh.local
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas    989768 Nov 22 15:02 agis_schedconf.cvmfs.json
[2025-11-23 10:24:23] drwx------ 5 boincer umatlas      4096 Nov 22 15:02 pilot3
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas       533 Nov 23 10:13 boinc_task_state.xml
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas      5952 Nov 23 10:20 init_data.xml
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas 919165902 Nov 23 10:22 HITS.47556137._001458.pool.root.1
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas      1065 Nov 23 10:23 memory_monitor_summary.json
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas   1526164 Nov 23 10:23 agis_ddmendpoints.agis.ALL.json
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas   2306231 Nov 23 10:23 log.47556137._001458.job.log.tgz.1
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas      8659 Nov 23 10:23 heartbeat.json
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas        95 Nov 23 10:23 pilot_heartbeat.json
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas        29 Nov 23 10:24 wrapper_checkpoint.txt
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 10:24 boinc_mmap_file
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas      4821 Nov 23 10:24 pilotlog.txt
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas   9652863 Nov 23 10:24 log.47556137._001458.job.log.1
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas       353 Nov 23 10:24 output.list
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas       620 Nov 23 10:24 runtime_log
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas  11980800 Nov 23 10:24 result.tar.gz
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 10:24 runtime_log.err
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas       668 Nov 23 10:24 9gyNDmQAog8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTpHKDmNSvNHo.diag
[2025-11-23 10:24:23] -rw-r--r-- 1 boincer umatlas     21287 Nov 23 10:24 stderr.txt
[2025-11-23 10:24:23] HITS file was successfully produced:
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas 919165902 Nov 23 10:22 shared/HITS.pool.root.1
[2025-11-23 10:24:23]  *** Contents of shared directory: ***
[2025-11-23 10:24:23] total 1308332
[2025-11-23 10:24:23] -rw-r--r-- 2 boincer umatlas 407969210 Nov 22 15:02 ATLAS.root_0
[2025-11-23 10:24:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 15:02 start_atlas.sh
[2025-11-23 10:24:23] -rw-r--r-- 2 boincer umatlas    590105 Nov 22 15:02 input.tar.gz
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas 919165902 Nov 23 10:22 HITS.pool.root.1
[2025-11-23 10:24:23] -rw------- 1 boincer umatlas  11980800 Nov 23 10:24 result.tar.gz
10:24:25 (7557): run_atlas exited; CPU time 543037.981203
10:24:25 (7557): called boinc_finish(0)

</stderr_txt>
]]>

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