Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
00:04:11 (3478174): wrapper (7.7.26015): starting
00:04:11 (3478174): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 00:04:11] Arguments: --nthreads 12
[2025-11-23 00:04:11] Threads: 12
[2025-11-23 00:04:11] Checking for CVMFS
[2025-11-23 00:04:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:04:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:04:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:04:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:04:11] 2.13.3.0 3419232 181 43704 153187 2 81 2558532 4096001 0 130560 0 117555 99.981 8015 2323 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-23 00:04:11] CVMFS is ok
[2025-11-23 00:04:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:04:11] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-23 00:04:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-23 00:04:11] Further information can be found at the LHC@home message board.
[2025-11-23 00:04:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:04:11] Checking for apptainer binary...
[2025-11-23 00:04:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:04:11] Running /usr/bin/apptainer --version
[2025-11-23 00:04:11] apptainer version 1.4.2
[2025-11-23 00:04:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:04:11] matisse
[2025-11-23 00:04:11] apptainer works
[2025-11-23 00:04:11] Set ATHENA_PROC_NUMBER=12
[2025-11-23 00:04:11] Set ATHENA_CORE_NUMBER=12
[2025-11-23 00:04:11] Starting ATLAS job with PandaID=6894267602
[2025-11-23 00:04:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 02:59:40]  *** The last 200 lines of the pilot log: ***
[2025-11-23 02:59:40] 2025-11-23 01:59:11,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,426 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 02:59:40] 2025-11-23 01:59:11,428 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3567.7303125
[2025-11-23 02:59:40] 2025-11-23 01:59:11,429 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6894267602/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,429 | INFO     | extracted standard info from prmon json
[2025-11-23 02:59:40] 2025-11-23 01:59:11,429 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 02:59:40] 2025-11-23 01:59:11,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 02:59:40] 2025-11-23 01:59:11,431 | INFO     | fitting pss+swap vs Time
[2025-11-23 02:59:40] 2025-11-23 01:59:11,431 | INFO     | sum of square deviations: 1577811219.9767404
[2025-11-23 02:59:40] 2025-11-23 01:59:11,431 | INFO     | sum of deviations: 93123493594.80229
[2025-11-23 02:59:40] 2025-11-23 01:59:11,431 | INFO     | mean x: 1763857890.011628
[2025-11-23 02:59:40] 2025-11-23 01:59:11,431 | INFO     | mean y: 3462379.0988372094
[2025-11-23 02:59:40] 2025-11-23 01:59:11,431 | INFO     | intersect: -104100632485.34302
[2025-11-23 02:59:40] 2025-11-23 01:59:11,431 | INFO     | chi2: 2.8910244579128404
[2025-11-23 02:59:40] 2025-11-23 01:59:11,431 | INFO     | sum of square deviations: 1444187973.6766498
[2025-11-23 02:59:40] 2025-11-23 01:59:11,432 | INFO     | sum of deviations: 117730649516.79643
[2025-11-23 02:59:40] 2025-11-23 01:59:11,432 | INFO     | mean x: 1763857737.5209582
[2025-11-23 02:59:40] 2025-11-23 01:59:11,432 | INFO     | mean y: 3489944.7724550897
[2025-11-23 02:59:40] 2025-11-23 01:59:11,432 | INFO     | intersect: -143786737420.78516
[2025-11-23 02:59:40] 2025-11-23 01:59:11,432 | INFO     | chi2: 1.9216013843870319
[2025-11-23 02:59:40] 2025-11-23 01:59:11,432 | INFO     | current chi2=1.9216013843870319 (change=33.53216438112317 %)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,432 | INFO     | sum of square deviations: 1318301631.9753134
[2025-11-23 02:59:40] 2025-11-23 01:59:11,432 | INFO     | sum of deviations: 111460455263.41978
[2025-11-23 02:59:40] 2025-11-23 01:59:11,432 | INFO     | mean x: 1763857585.0123458
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | mean y: 3482347.7901234566
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | intersect: -149128070459.8406
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | chi2: 1.9188427194514468
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | current chi2=1.9188427194514468 (change=0.1435607279428068 %)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | right removable region: 161
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | sum of square deviations: 1444144663.6287425
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | sum of deviations: 44430141805.94611
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | mean x: 1763858042.526946
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | mean y: 3517422.011976048
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | intersect: -54262834785.46849
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | chi2: 1.0370865325892848
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | current chi2=1.0370865325892848 (change=64.12736911475305 %)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,433 | INFO     | sum of square deviations: 1318276133.9012308
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | sum of deviations: 33801018353.46914
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | mean x: 1763858195.0246913
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | mean y: 3530277.8827160494
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | intersect: -45222353503.01373
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | chi2: 1.0110149188666864
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | current chi2=1.0110149188666864 (change=2.513928481696287 %)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | left removable region: 20
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | sum of square deviations: 869192207.1063837
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | sum of deviations: 38345758060.872314
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | mean x: 1763858164.531915
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | mean y: 3578460.361702128
[2025-11-23 02:59:40] 2025-11-23 01:59:11,434 | INFO     | intersect: -77811751541.27605
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | chi2: 0.012618310464090343
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | current memory leak: 44.12 B/s (using 141 data points, chi2=0.01)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | could have reported an average CPU frequency of 3832 MHz (9 samples)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | ..............................
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | . Timing measurements:
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | . get job = 0 s
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | . initial setup = 1 s
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | . payload setup = 2 s
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | . stage-in = 0 s
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | . payload execution = 10469 s
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | . stage-out = 0 s
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | . log creation = 0 s
[2025-11-23 02:59:40] 2025-11-23 01:59:11,435 | INFO     | ..............................
[2025-11-23 02:59:40] 2025-11-23 01:59:11,608 | INFO     | time since job start (10494s) is within the limit (172800.0s)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,963 | INFO     | 
[2025-11-23 02:59:40] 2025-11-23 01:59:11,963 | INFO     | job summary report
[2025-11-23 02:59:40] 2025-11-23 01:59:11,963 | INFO     | --------------------------------------------------
[2025-11-23 02:59:40] 2025-11-23 01:59:11,963 | INFO     | PanDA job id: 6894267602
[2025-11-23 02:59:40] 2025-11-23 01:59:11,963 | INFO     | task id: 47533967
[2025-11-23 02:59:40] 2025-11-23 01:59:11,963 | INFO     | errors: (none)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,963 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | pilot state: finished 
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | transexitcode: 0
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | exeerrorcode: 0
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | exeerrordiag: 
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | exitcode: 0
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | exitmsg: OK
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | cpuconsumptiontime: 122399 s
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | nevents: 1000
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | neventsw: 0
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | pid: 3488505
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | pgrp: 3488505
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | corecount: 12
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | event service: False
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | sizes: {0: 2298643, 1: 2298842, 2: 2299104, 11: 2299132, 10475: 2329163, 10476: 2329162, 10477: 2338410, 10482: 2338664}
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | --------------------------------------------------
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | 
[2025-11-23 02:59:40] 2025-11-23 01:59:11,964 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-23 02:59:40] 2025-11-23 01:59:11,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | job 6894267602 has completed (purged errors)
[2025-11-23 02:59:40] 2025-11-23 01:59:11,975 | INFO     | overall cleanup function is called
[2025-11-23 02:59:40] 2025-11-23 01:59:12,987 | INFO     | --- collectZombieJob: --- 10, [3488505]
[2025-11-23 02:59:40] 2025-11-23 01:59:12,987 | INFO     | zombie collector waiting for pid 3488505
[2025-11-23 02:59:40] 2025-11-23 01:59:12,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 02:59:40] 2025-11-23 01:59:12,987 | INFO     | collected zombie processes
[2025-11-23 02:59:40] 2025-11-23 01:59:12,987 | INFO     | will attempt to kill all subprocesses of pid=3488505
[2025-11-23 02:59:40] 2025-11-23 01:59:13,049 | INFO     | process IDs to be killed: [3488505] (in reverse order)
[2025-11-23 02:59:40] 2025-11-23 01:59:13,075 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 02:59:40] 2025-11-23 01:59:13,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 02:59:40] 2025-11-23 01:59:13,077 | INFO     | did not find any defunct processes belonging to 3488505
[2025-11-23 02:59:40] 2025-11-23 01:59:13,079 | INFO     | did not find any defunct processes belonging to 3488505
[2025-11-23 02:59:40] 2025-11-23 01:59:13,079 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 02:59:40] 2025-11-23 01:59:13,079 | INFO     | ready for new job
[2025-11-23 02:59:40] 2025-11-23 01:59:13,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 02:59:40] 2025-11-23 01:59:13,080 | INFO     | ***************************************
[2025-11-23 02:59:40] 2025-11-23 01:59:13,080 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 02:59:40] 2025-11-23 01:59:13,080 | INFO     | ***************************************
[2025-11-23 02:59:40] 2025-11-23 01:59:13,080 | INFO     | 
[2025-11-23 02:59:40] 2025-11-23 01:59:13,081 | INFO     | architecture information:
[2025-11-23 02:59:40] 2025-11-23 01:59:13,081 | INFO     | executing command: cat /etc/os-release
[2025-11-23 02:59:40] 2025-11-23 01:59:13,088 | INFO     | cat /etc/os-release:
[2025-11-23 02:59:40] NAME="CentOS Linux"
[2025-11-23 02:59:40] VERSION="7 (Core)"
[2025-11-23 02:59:40] ID="centos"
[2025-11-23 02:59:40] ID_LIKE="rhel fedora"
[2025-11-23 02:59:40] VERSION_ID="7"
[2025-11-23 02:59:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 02:59:40] ANSI_COLOR="0;31"
[2025-11-23 02:59:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 02:59:40] HOME_URL="https://www.centos.org/"
[2025-11-23 02:59:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 02:59:40] 
[2025-11-23 02:59:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 02:59:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 02:59:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 02:59:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 02:59:40] 
[2025-11-23 02:59:40] 2025-11-23 01:59:13,088 | INFO     | ***************************************
[2025-11-23 02:59:40] 2025-11-23 01:59:13,590 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-23 02:59:40] 2025-11-23 01:59:13,598 | INFO     | sufficient remaining disk space (461873610752 B)
[2025-11-23 02:59:40] 2025-11-23 01:59:13,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 02:59:40] 2025-11-23 01:59:13,598 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 02:59:40] 2025-11-23 01:59:13,598 | INFO     | update_server=False
[2025-11-23 02:59:40] 2025-11-23 01:59:13,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 02:59:40] 2025-11-23 01:59:13,599 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 02:59:40] 2025-11-23 01:59:13,599 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 02:59:40] 2025-11-23 01:59:13,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 02:59:40] 2025-11-23 01:59:13,599 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 02:59:40] 2025-11-23 01:59:13,744 | INFO     | all data control threads have been joined
[2025-11-23 02:59:40] 2025-11-23 01:59:13,767 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 02:59:40] 2025-11-23 01:59:13,767 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 02:59:40] 2025-11-23 01:59:13,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:59:40] 2025-11-23 01:59:13,767 | INFO     | will abort loop
[2025-11-23 02:59:40] 2025-11-23 01:59:14,420 | INFO     | all job control threads have been joined
[2025-11-23 02:59:40] 2025-11-23 01:59:14,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 02:59:40] 2025-11-23 01:59:14,603 | INFO     | [job] retrieve thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:14,623 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:14,749 | INFO     | [data] control thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:14,752 | INFO     | all payload control threads have been joined
[2025-11-23 02:59:40] 2025-11-23 01:59:14,772 | INFO     | [job] job monitor thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:14,865 | INFO     | [data] copytool_in thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:14,925 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:15,425 | INFO     | [job] control thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:15,635 | INFO     | [payload] failed_post thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:15,693 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:15,757 | INFO     | [payload] control thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:16,004 | INFO     | [job] validate thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:16,081 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:16,146 | INFO     | [payload] validate_post thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:16,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:59:40] 2025-11-23 01:59:16,501 | INFO     | [data] copytool_out thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:17,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 02:59:40] 2025-11-23 01:59:17,483 | INFO     | [job] queue monitor thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:21,026 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 02:59:40] 2025-11-23 01:59:33,430 | INFO     | [monitor] cgroup control has ended
[2025-11-23 02:59:40] 2025-11-23 01:59:35,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737152317248)>', '<ExcThread(monitor, started 139736156993280)>']
[2025-11-23 02:59:40] 2025-11-23 01:59:35,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 02:59:40] 2025-11-23 01:59:35,701 | INFO     | [monitor] control thread has ended
[2025-11-23 02:59:40] 2025-11-23 01:59:40,179 | INFO     | all workflow threads have been joined
[2025-11-23 02:59:40] 2025-11-23 01:59:40,179 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 02:59:40] 2025-11-23 01:59:40,179 | INFO     | traces error code: 0
[2025-11-23 02:59:40] 2025-11-23 01:59:40,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 02:59:40] 2025-11-23 01:59:40,223 [wrapper] ==== pilot stdout END ====
[2025-11-23 02:59:40] 2025-11-23 01:59:40,224 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 02:59:40] 2025-11-23 01:59:40,226 [wrapper] pilotpid: 3481963
[2025-11-23 02:59:40] 2025-11-23 01:59:40,227 [wrapper] Pilot exit status: 0
[2025-11-23 02:59:40] 2025-11-23 01:59:40,232 [wrapper] pandaids: 6894267602
[2025-11-23 02:59:40] 2025-11-23 01:59:40,249 [wrapper] cleanup supervisor_pilot 3516752 3481964
[2025-11-23 02:59:40] 2025-11-23 01:59:40,250 [wrapper] Test setup, not cleaning
[2025-11-23 02:59:40] 2025-11-23 01:59:40,251 [wrapper] apfmon messages muted
[2025-11-23 02:59:40] 2025-11-23 01:59:40,253 [wrapper] ==== wrapper stdout END ====
[2025-11-23 02:59:40] 2025-11-23 01:59:40,254 [wrapper] ==== wrapper stderr END ====
[2025-11-23 02:59:40]  *** Error codes and diagnostics ***
[2025-11-23 02:59:40]     "exeErrorCode": 0,
[2025-11-23 02:59:40]     "exeErrorDiag": "",
[2025-11-23 02:59:40]     "pilotErrorCode": 0,
[2025-11-23 02:59:40]     "pilotErrorDiag": "",
[2025-11-23 02:59:40]  *** Listing of results directory ***
[2025-11-23 02:59:40] total 1314596
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:18 queuedata.json
[2025-11-23 02:59:40] -rwx------ 1 boinc boinc     36292 Nov 21 06:19 runpilot2-wrapper.sh
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc       100 Nov 23 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 02:59:40] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 00:04 run_atlas
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc       105 Nov 23 00:04 job.xml
[2025-11-23 02:59:40] -rw-r--r-- 2 boinc boinc 409961609 Nov 23 00:04 EVNT.47493127._002241.pool.root.1
[2025-11-23 02:59:40] drwxrwx--x 2 boinc boinc      4096 Nov 23 00:04 shared
[2025-11-23 02:59:40] -rw-r--r-- 2 boinc boinc    590105 Nov 23 00:04 input.tar.gz
[2025-11-23 02:59:40] -rw-r--r-- 2 boinc boinc     15847 Nov 23 00:04 start_atlas.sh
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc         0 Nov 23 00:04 boinc_setup_complete
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc      9639 Nov 23 00:04 init_data.xml
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc         0 Nov 23 00:04 boinc_lockfile
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc      2786 Nov 23 00:04 pandaJob.out
[2025-11-23 02:59:40] -rw------- 1 boinc boinc    989784 Nov 23 00:04 agis_schedconf.cvmfs.json
[2025-11-23 02:59:40] -rw------- 1 boinc boinc   1526164 Nov 23 00:04 agis_ddmendpoints.agis.ALL.json
[2025-11-23 02:59:40] drwx------ 5 boinc boinc      4096 Nov 23 00:04 pilot3
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc       532 Nov 23 02:55 boinc_task_state.xml
[2025-11-23 02:59:40] -rw------- 1 boinc boinc        95 Nov 23 02:58 pilot_heartbeat.json
[2025-11-23 02:59:40] -rw------- 1 boinc boinc 925379335 Nov 23 02:58 HITS.47533967._002122.pool.root.1
[2025-11-23 02:59:40] -rw------- 1 boinc boinc      1028 Nov 23 02:59 memory_monitor_summary.json
[2025-11-23 02:59:40] -rw------- 1 boinc boinc   1920315 Nov 23 02:59 log.47533967._002122.job.log.tgz.1
[2025-11-23 02:59:40] -rw------- 1 boinc boinc      8567 Nov 23 02:59 heartbeat.json
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc        29 Nov 23 02:59 wrapper_checkpoint.txt
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc      8192 Nov 23 02:59 boinc_mmap_file
[2025-11-23 02:59:40] -rw------- 1 boinc boinc      4746 Nov 23 02:59 pilotlog.txt
[2025-11-23 02:59:40] -rw------- 1 boinc boinc   1518766 Nov 23 02:59 log.47533967._002122.job.log.1
[2025-11-23 02:59:40] -rw------- 1 boinc boinc       353 Nov 23 02:59 output.list
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc       620 Nov 23 02:59 runtime_log
[2025-11-23 02:59:40] -rw------- 1 boinc boinc   3461120 Nov 23 02:59 result.tar.gz
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc      8895 Nov 23 02:59 runtime_log.err
[2025-11-23 02:59:40] -rw------- 1 boinc boinc       653 Nov 23 02:59 rHwNDmNjYg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfMHKDmxINI3m.diag
[2025-11-23 02:59:40] -rw-r--r-- 1 boinc boinc     21345 Nov 23 02:59 stderr.txt
[2025-11-23 02:59:40] HITS file was successfully produced:
[2025-11-23 02:59:40] -rw------- 1 boinc boinc 925379335 Nov 23 02:58 shared/HITS.pool.root.1
[2025-11-23 02:59:40]  *** Contents of shared directory: ***
[2025-11-23 02:59:40] total 1308032
[2025-11-23 02:59:40] -rw-r--r-- 2 boinc boinc 409961609 Nov 23 00:04 ATLAS.root_0
[2025-11-23 02:59:40] -rw-r--r-- 2 boinc boinc    590105 Nov 23 00:04 input.tar.gz
[2025-11-23 02:59:40] -rw-r--r-- 2 boinc boinc     15847 Nov 23 00:04 start_atlas.sh
[2025-11-23 02:59:40] -rw------- 1 boinc boinc 925379335 Nov 23 02:58 HITS.pool.root.1
[2025-11-23 02:59:40] -rw------- 1 boinc boinc   3461120 Nov 23 02:59 result.tar.gz
02:59:41 (3478174): run_atlas exited; CPU time 122226.215297
02:59:41 (3478174): called boinc_finish(0)

</stderr_txt>
]]>

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