Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:36:17 (30124): wrapper (7.7.26015): starting
14:36:17 (30124): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 14:36:17] Arguments: --nthreads 8
[2025-11-22 14:36:17] Threads: 8
[2025-11-22 14:36:17] Checking for CVMFS
[2025-11-22 14:36:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 14:36:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 14:36:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 14:36:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 14:36:17] 2.11.2.0 14729 112335 145492 153183 0 82 16600919 18432001 1885 130560 0 80780468 99.973 4692892 29243 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 14:36:17] CVMFS is ok
[2025-11-22 14:36:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 14:36:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 14:36:17] Further information can be found at the LHC@home message board.
[2025-11-22 14:36:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 14:36:17] Checking for apptainer binary...
[2025-11-22 14:36:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 14:36:17] Running /usr/bin/apptainer --version
[2025-11-22 14:36:17] apptainer version 1.3.2-1.el7
[2025-11-22 14:36:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 14:36:18] c-206-30.aglt2.org
[2025-11-22 14:36:18] apptainer works
[2025-11-22 14:36:18] Set ATHENA_PROC_NUMBER=8
[2025-11-22 14:36:18] Set ATHENA_CORE_NUMBER=8
[2025-11-22 14:36:18] Starting ATLAS job with PandaID=6893876626
[2025-11-22 14:36:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 10:14:33]  *** The last 200 lines of the pilot log: ***
[2025-11-23 10:14:33] 2025-11-23 15:13:23,921 | INFO     | monitor loop #5037: job 0:6893876626 is in state 'finished'
[2025-11-23 10:14:33] 2025-11-23 15:13:23,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 10:14:33] 2025-11-23 15:13:24,805 | INFO     | time since job start (70614s) is within the limit (172800.0s)
[2025-11-23 10:14:33] 2025-11-23 15:13:25,455 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 10:14:33] 2025-11-23 15:13:25,461 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2400.2083333333335
[2025-11-23 10:14:33] 2025-11-23 15:13:25,469 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893876626/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 10:14:33] 2025-11-23 15:13:25,470 | INFO     | extracted standard info from prmon json
[2025-11-23 10:14:33] 2025-11-23 15:13:25,470 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 10:14:33] 2025-11-23 15:13:25,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 10:14:33] 2025-11-23 15:13:25,500 | INFO     | fitting pss+swap vs Time
[2025-11-23 10:14:33] 2025-11-23 15:13:25,502 | INFO     | sum of square deviations: 480260955777.0751
[2025-11-23 10:14:33] 2025-11-23 15:13:25,548 | INFO     | sum of deviations: 2360111563094.183
[2025-11-23 10:14:33] 2025-11-23 15:13:25,548 | INFO     | mean x: 1763875475.593777
[2025-11-23 10:14:33] 2025-11-23 15:13:25,548 | INFO     | mean y: 2866976.219533276
[2025-11-23 10:14:33] 2025-11-23 15:13:25,549 | INFO     | intersect: -8665218271.458725
[2025-11-23 10:14:33] 2025-11-23 15:13:25,550 | INFO     | chi2: 4.953174427715543
[2025-11-23 10:14:33] 2025-11-23 15:13:25,552 | INFO     | sum of square deviations: 474061644420.30444
[2025-11-23 10:14:33] 2025-11-23 15:13:25,597 | INFO     | sum of deviations: 2671238813420.487
[2025-11-23 10:14:33] 2025-11-23 15:13:25,598 | INFO     | mean x: 1763875323.0963542
[2025-11-23 10:14:33] 2025-11-23 15:13:25,598 | INFO     | mean y: 2874626.0225694445
[2025-11-23 10:14:33] 2025-11-23 15:13:25,598 | INFO     | intersect: -9936196126.79317
[2025-11-23 10:14:33] 2025-11-23 15:13:25,600 | INFO     | chi2: 2.772782982622812
[2025-11-23 10:14:33] 2025-11-23 15:13:25,600 | INFO     | current chi2=2.772782982622812 (change=44.020082008263756 %)
[2025-11-23 10:14:33] 2025-11-23 15:13:25,602 | INFO     | sum of square deviations: 467915915463.5184
[2025-11-23 10:14:33] 2025-11-23 15:13:25,644 | INFO     | sum of deviations: 2792518158693.265
[2025-11-23 10:14:33] 2025-11-23 15:13:25,644 | INFO     | mean x: 1763875170.5989537
[2025-11-23 10:14:33] 2025-11-23 15:13:25,645 | INFO     | mean y: 2877633.2179598953
[2025-11-23 10:14:33] 2025-11-23 15:13:25,645 | INFO     | intersect: -10523914212.89054
[2025-11-23 10:14:33] 2025-11-23 15:13:25,646 | INFO     | chi2: 2.3275474557028466
[2025-11-23 10:14:33] 2025-11-23 15:13:25,647 | INFO     | current chi2=2.3275474557028466 (change=16.05735211555616 %)
[2025-11-23 10:14:33] 2025-11-23 15:13:25,647 | INFO     | right removable region: 1146
[2025-11-23 10:14:33] 2025-11-23 15:13:25,649 | INFO     | sum of square deviations: 474061225350.3042
[2025-11-23 10:14:33] 2025-11-23 15:13:25,697 | INFO     | sum of deviations: 2059940592643.9092
[2025-11-23 10:14:33] 2025-11-23 15:13:25,698 | INFO     | mean x: 1763875628.0963542
[2025-11-23 10:14:33] 2025-11-23 15:13:25,698 | INFO     | mean y: 2874351.550347222
[2025-11-23 10:14:33] 2025-11-23 15:13:25,698 | INFO     | intersect: -7661703159.521177
[2025-11-23 10:14:33] 2025-11-23 15:13:25,700 | INFO     | chi2: 2.9103079081450924
[2025-11-23 10:14:33] 2025-11-23 15:13:25,700 | INFO     | current chi2=2.9103079081450924 (change=41.2435812504314 %)
[2025-11-23 10:14:33] 2025-11-23 15:13:25,702 | INFO     | sum of square deviations: 467915217745.9113
[2025-11-23 10:14:33] 2025-11-23 15:13:25,748 | INFO     | sum of deviations: 1983886906241.298
[2025-11-23 10:14:33] 2025-11-23 15:13:25,748 | INFO     | mean x: 1763875780.5972102
[2025-11-23 10:14:33] 2025-11-23 15:13:25,748 | INFO     | mean y: 2876238.3426329554
[2025-11-23 10:14:33] 2025-11-23 15:13:25,748 | INFO     | intersect: -7475679561.189346
[2025-11-23 10:14:33] 2025-11-23 15:13:25,750 | INFO     | chi2: 2.860992487418744
[2025-11-23 10:14:33] 2025-11-23 15:13:25,750 | INFO     | current chi2=2.860992487418744 (change=1.6945087008948134 %)
[2025-11-23 10:14:33] 2025-11-23 15:13:25,750 | INFO     | left removable region: 20
[2025-11-23 10:14:33] 2025-11-23 15:13:25,752 | INFO     | sum of square deviations: 442682604980.04974
[2025-11-23 10:14:33] 2025-11-23 15:13:25,796 | INFO     | sum of deviations: 2319098852285.742
[2025-11-23 10:14:33] 2025-11-23 15:13:25,796 | INFO     | mean x: 1763875750.1030195
[2025-11-23 10:14:33] 2025-11-23 15:13:25,796 | INFO     | mean y: 2889943.1056838366
[2025-11-23 10:14:33] 2025-11-23 15:13:25,796 | INFO     | intersect: -9237595636.45061
[2025-11-23 10:14:33] 2025-11-23 15:13:25,798 | INFO     | chi2: 0.18876740669284228
[2025-11-23 10:14:33] 2025-11-23 15:13:25,798 | INFO     | current memory leak: 5.24 B/s (using 1126 data points, chi2=0.19)
[2025-11-23 10:14:33] 2025-11-23 15:13:25,799 | INFO     | could have reported an average CPU frequency of 2628 MHz (42 samples)
[2025-11-23 10:14:33] 2025-11-23 15:13:25,800 | INFO     | ..............................
[2025-11-23 10:14:33] 2025-11-23 15:13:25,800 | INFO     | . Timing measurements:
[2025-11-23 10:14:33] 2025-11-23 15:13:25,800 | INFO     | . get job = 0 s
[2025-11-23 10:14:33] 2025-11-23 15:13:25,800 | INFO     | . initial setup = 2 s
[2025-11-23 10:14:33] 2025-11-23 15:13:25,800 | INFO     | . payload setup = 5 s
[2025-11-23 10:14:33] 2025-11-23 15:13:25,801 | INFO     | . stage-in = 0 s
[2025-11-23 10:14:33] 2025-11-23 15:13:25,801 | INFO     | . payload execution = 70577 s
[2025-11-23 10:14:33] 2025-11-23 15:13:25,801 | INFO     | . stage-out = 3 s
[2025-11-23 10:14:33] 2025-11-23 15:13:25,801 | INFO     | . log creation = 0 s
[2025-11-23 10:14:33] 2025-11-23 15:13:25,801 | INFO     | ..............................
[2025-11-23 10:14:33] 2025-11-23 15:13:25,924 | INFO     | 
[2025-11-23 10:14:33] 2025-11-23 15:13:25,924 | INFO     | job summary report
[2025-11-23 10:14:33] 2025-11-23 15:13:25,924 | INFO     | --------------------------------------------------
[2025-11-23 10:14:33] 2025-11-23 15:13:25,924 | INFO     | PanDA job id: 6893876626
[2025-11-23 10:14:33] 2025-11-23 15:13:25,924 | INFO     | task id: 47523449
[2025-11-23 10:14:33] 2025-11-23 15:13:25,924 | INFO     | errors: (none)
[2025-11-23 10:14:33] 2025-11-23 15:13:25,924 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 10:14:33] 2025-11-23 15:13:25,924 | INFO     | pilot state: finished 
[2025-11-23 10:14:33] 2025-11-23 15:13:25,925 | INFO     | transexitcode: 0
[2025-11-23 10:14:33] 2025-11-23 15:13:25,925 | INFO     | exeerrorcode: 0
[2025-11-23 10:14:33] 2025-11-23 15:13:25,925 | INFO     | exeerrordiag: 
[2025-11-23 10:14:33] 2025-11-23 15:13:25,925 | INFO     | exitcode: 0
[2025-11-23 10:14:33] 2025-11-23 15:13:25,925 | INFO     | exitmsg: OK
[2025-11-23 10:14:33] 2025-11-23 15:13:25,925 | INFO     | cpuconsumptiontime: 543055 s
[2025-11-23 10:14:33] 2025-11-23 15:13:25,925 | INFO     | nevents: 1000
[2025-11-23 10:14:33] 2025-11-23 15:13:25,925 | INFO     | neventsw: 0
[2025-11-23 10:14:33] 2025-11-23 15:13:25,925 | INFO     | pid: 7945
[2025-11-23 10:14:33] 2025-11-23 15:13:25,925 | INFO     | pgrp: 7945
[2025-11-23 10:14:33] 2025-11-23 15:13:25,925 | INFO     | corecount: 8
[2025-11-23 10:14:33] 2025-11-23 15:13:25,926 | INFO     | event service: False
[2025-11-23 10:14:33] 2025-11-23 15:13:25,926 | INFO     | sizes: {0: 2298749, 1: 2298749, 4: 2299039, 12: 2299067, 70587: 2355805, 70591: 2364799, 70595: 2364983, 70600: 2365229}
[2025-11-23 10:14:33] 2025-11-23 15:13:25,926 | INFO     | --------------------------------------------------
[2025-11-23 10:14:33] 2025-11-23 15:13:25,926 | INFO     | 
[2025-11-23 10:14:33] 2025-11-23 15:13:25,926 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 10:14:33] 2025-11-23 15:13:25,966 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,968 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 10:14:33] 2025-11-23 15:13:25,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,969 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 10:14:33] 2025-11-23 15:13:25,969 | INFO     | job 6893876626 has completed (purged errors)
[2025-11-23 10:14:33] 2025-11-23 15:13:25,969 | INFO     | overall cleanup function is called
[2025-11-23 10:14:33] 2025-11-23 15:13:26,985 | INFO     | --- collectZombieJob: --- 10, [7945]
[2025-11-23 10:14:33] 2025-11-23 15:13:26,985 | INFO     | zombie collector waiting for pid 7945
[2025-11-23 10:14:33] 2025-11-23 15:13:26,985 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 10:14:33] 2025-11-23 15:13:26,985 | INFO     | collected zombie processes
[2025-11-23 10:14:33] 2025-11-23 15:13:26,986 | INFO     | will attempt to kill all subprocesses of pid=7945
[2025-11-23 10:14:33] 2025-11-23 15:13:27,164 | INFO     | process IDs to be killed: [7945] (in reverse order)
[2025-11-23 10:14:33] 2025-11-23 15:13:27,225 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 10:14:33] 2025-11-23 15:13:27,225 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 10:14:33] 2025-11-23 15:13:27,228 | INFO     | did not find any defunct processes belonging to 7945
[2025-11-23 10:14:33] 2025-11-23 15:13:27,231 | INFO     | did not find any defunct processes belonging to 7945
[2025-11-23 10:14:33] 2025-11-23 15:13:27,232 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 10:14:33] 2025-11-23 15:13:27,232 | INFO     | ready for new job
[2025-11-23 10:14:33] 2025-11-23 15:13:27,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 10:14:33] 2025-11-23 15:13:27,236 | INFO     | ***************************************
[2025-11-23 10:14:33] 2025-11-23 15:13:27,236 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 10:14:33] 2025-11-23 15:13:27,236 | INFO     | ***************************************
[2025-11-23 10:14:33] 2025-11-23 15:13:27,236 | INFO     | 
[2025-11-23 10:14:33] 2025-11-23 15:13:27,237 | INFO     | architecture information:
[2025-11-23 10:14:33] 2025-11-23 15:13:27,238 | INFO     | executing command: cat /etc/os-release
[2025-11-23 10:14:33] 2025-11-23 15:13:27,249 | INFO     | cat /etc/os-release:
[2025-11-23 10:14:33] NAME="CentOS Linux"
[2025-11-23 10:14:33] VERSION="7 (Core)"
[2025-11-23 10:14:33] ID="centos"
[2025-11-23 10:14:33] ID_LIKE="rhel fedora"
[2025-11-23 10:14:33] VERSION_ID="7"
[2025-11-23 10:14:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 10:14:33] ANSI_COLOR="0;31"
[2025-11-23 10:14:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 10:14:33] HOME_URL="https://www.centos.org/"
[2025-11-23 10:14:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 10:14:33] 
[2025-11-23 10:14:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 10:14:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 10:14:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 10:14:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 10:14:33] 
[2025-11-23 10:14:33] 2025-11-23 15:13:27,250 | INFO     | ***************************************
[2025-11-23 10:14:33] 2025-11-23 15:13:27,752 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 10:14:33] 2025-11-23 15:13:27,768 | INFO     | sufficient remaining disk space (26220691456 B)
[2025-11-23 10:14:33] 2025-11-23 15:13:27,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 10:14:33] 2025-11-23 15:13:27,769 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 10:14:33] 2025-11-23 15:13:27,769 | INFO     | update_server=False
[2025-11-23 10:14:33] 2025-11-23 15:13:27,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 10:14:33] 2025-11-23 15:13:27,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 10:14:33] 2025-11-23 15:13:27,770 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 10:14:33] 2025-11-23 15:13:27,773 | INFO     | aborting loop
[2025-11-23 10:14:33] 2025-11-23 15:13:27,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 10:14:33] 2025-11-23 15:13:27,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 10:14:33] 2025-11-23 15:13:27,884 | INFO     | all data control threads have been joined
[2025-11-23 10:14:33] 2025-11-23 15:13:28,150 | INFO     | all job control threads have been joined
[2025-11-23 10:14:33] 2025-11-23 15:13:28,771 | INFO     | all payload control threads have been joined
[2025-11-23 10:14:33] 2025-11-23 15:13:28,774 | INFO     | [job] retrieve thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:28,780 | INFO     | [job] job monitor thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:28,780 | INFO     | [job] queue monitor thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:28,890 | INFO     | [data] control thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:29,106 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:29,116 | INFO     | [job] validate thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:29,150 | INFO     | [data] copytool_in thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:29,150 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:29,155 | INFO     | [job] control thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:29,525 | INFO     | [payload] failed_post thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:29,705 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:29,778 | INFO     | [payload] control thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:29,811 | INFO     | [data] copytool_out thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:29,912 | INFO     | [payload] validate_post thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:30,220 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:31,777 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 10:14:33] 2025-11-23 15:13:58,046 | INFO     | PID=1354 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 10:14:33] 2025-11-23 15:13:58,054 | INFO     | .. there are 3 such processes running
[2025-11-23 10:14:33] 2025-11-23 15:13:58,054 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 10:14:33] 2025-11-23 15:13:58,055 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 10:14:33] 2025-11-23 15:13:58,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 10:14:33] 2025-11-23 15:14:27,089 | INFO     | [monitor] cgroup control has ended
[2025-11-23 10:14:33] 2025-11-23 15:14:27,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140640612005696)>', '<ExcThread(monitor, started 140640037889792)>']
[2025-11-23 10:14:33] 2025-11-23 15:14:28,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 10:14:33] 2025-11-23 15:14:28,208 | INFO     | [monitor] control thread has ended
[2025-11-23 10:14:33] 2025-11-23 15:14:32,960 | INFO     | all workflow threads have been joined
[2025-11-23 10:14:33] 2025-11-23 15:14:32,961 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 10:14:33] 2025-11-23 15:14:32,961 | INFO     | traces error code: 0
[2025-11-23 10:14:33] 2025-11-23 15:14:32,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 10:14:33] 2025-11-23 15:14:33,088 [wrapper] ==== pilot stdout END ====
[2025-11-23 10:14:33] 2025-11-23 15:14:33,090 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 10:14:33] 2025-11-23 15:14:33,092 [wrapper] pilotpid: 1354
[2025-11-23 10:14:33] 2025-11-23 15:14:33,094 [wrapper] Pilot exit status: 0
[2025-11-23 10:14:33] 2025-11-23 15:14:33,106 [wrapper] pandaids: 6893876626
[2025-11-23 10:14:33] 2025-11-23 15:14:33,147 [wrapper] cleanup supervisor_pilot 28590 1355
[2025-11-23 10:14:33] 2025-11-23 15:14:33,149 [wrapper] Test setup, not cleaning
[2025-11-23 10:14:33] 2025-11-23 15:14:33,152 [wrapper] apfmon messages muted
[2025-11-23 10:14:33] 2025-11-23 15:14:33,155 [wrapper] ==== wrapper stdout END ====
[2025-11-23 10:14:33] 2025-11-23 15:14:33,157 [wrapper] ==== wrapper stderr END ====
[2025-11-23 10:14:33]  *** Error codes and diagnostics ***
[2025-11-23 10:14:33]     "exeErrorCode": 0,
[2025-11-23 10:14:33]     "exeErrorDiag": "",
[2025-11-23 10:14:33]     "pilotErrorCode": 0,
[2025-11-23 10:14:33]     "pilotErrorDiag": "",
[2025-11-23 10:14:33]  *** Listing of results directory ***
[2025-11-23 10:14:33] total 1327980
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 12:21 pilot3.tar.gz
[2025-11-23 10:14:33] -rwx------ 1 boincer umatlas     36292 Nov 20 12:30 runpilot2-wrapper.sh
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 12:30 queuedata.json
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas       100 Nov 22 14:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 10:14:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 14:36 run_atlas
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas       105 Nov 22 14:36 job.xml
[2025-11-23 10:14:33] -rw-r--r-- 2 boincer umatlas 410229912 Nov 22 14:36 EVNT.47493127._000765.pool.root.1
[2025-11-23 10:14:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 14:36 start_atlas.sh
[2025-11-23 10:14:33] drwxrwx--x 2 boincer umatlas      4096 Nov 22 14:36 shared
[2025-11-23 10:14:33] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 14:36 input.tar.gz
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas         0 Nov 22 14:36 boinc_lockfile
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas      2781 Nov 22 14:36 pandaJob.out
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas        57 Nov 22 14:36 setup.sh.local
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas    989768 Nov 22 14:36 agis_schedconf.cvmfs.json
[2025-11-23 10:14:33] drwx------ 5 boincer umatlas      4096 Nov 22 14:36 pilot3
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas       532 Nov 23 10:00 boinc_task_state.xml
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas 921588211 Nov 23 10:12 HITS.47523449._007641.pool.root.1
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas      1068 Nov 23 10:13 memory_monitor_summary.json
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas   1526164 Nov 23 10:13 agis_ddmendpoints.agis.ALL.json
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas   2309118 Nov 23 10:13 log.47523449._007641.job.log.tgz.1
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas      8661 Nov 23 10:13 heartbeat.json
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 10:13 init_data.xml
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas        95 Nov 23 10:13 pilot_heartbeat.json
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 10:14 boinc_mmap_file
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas        29 Nov 23 10:14 wrapper_checkpoint.txt
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas      4820 Nov 23 10:14 pilotlog.txt
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas   9742311 Nov 23 10:14 log.47523449._007641.job.log.1
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas       353 Nov 23 10:14 output.list
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas       620 Nov 23 10:14 runtime_log
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas  12072960 Nov 23 10:14 result.tar.gz
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 10:14 runtime_log.err
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas       668 Nov 23 10:14 pmmKDmdfNg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZMIKDmr9rATo.diag
[2025-11-23 10:14:33] -rw-r--r-- 1 boincer umatlas     21296 Nov 23 10:14 stderr.txt
[2025-11-23 10:14:33] HITS file was successfully produced:
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas 921588211 Nov 23 10:12 shared/HITS.pool.root.1
[2025-11-23 10:14:33]  *** Contents of shared directory: ***
[2025-11-23 10:14:33] total 1313004
[2025-11-23 10:14:33] -rw-r--r-- 2 boincer umatlas 410229912 Nov 22 14:36 ATLAS.root_0
[2025-11-23 10:14:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 14:36 start_atlas.sh
[2025-11-23 10:14:33] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 14:36 input.tar.gz
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas 921588211 Nov 23 10:12 HITS.pool.root.1
[2025-11-23 10:14:33] -rw------- 1 boincer umatlas  12072960 Nov 23 10:14 result.tar.gz
10:14:34 (30124): run_atlas exited; CPU time 541732.204105
10:14:34 (30124): called boinc_finish(0)

</stderr_txt>
]]>

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