Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:18 (26244): wrapper (7.7.26015): starting
13:59:18 (26244): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 13:59:18] Arguments: --nthreads 8
[2025-11-22 13:59:18] Threads: 8
[2025-11-22 13:59:18] Checking for CVMFS
[2025-11-22 13:59:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 13:59:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 13:59:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 13:59:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 13:59:18] 2.11.2.0 6491 3578 66932 153181 1 81 11068649 18432001 1885 130560 0 3173521 99.991 130604 10460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 13:59:18] CVMFS is ok
[2025-11-22 13:59:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 13:59:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 13:59:18] Further information can be found at the LHC@home message board.
[2025-11-22 13:59:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 13:59:18] Checking for apptainer binary...
[2025-11-22 13:59:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 13:59:18] Running /usr/bin/apptainer --version
[2025-11-22 13:59:18] apptainer version 1.3.2-1.el7
[2025-11-22 13:59:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 13:59:19] c-206-29.aglt2.org
[2025-11-22 13:59:19] apptainer works
[2025-11-22 13:59:19] Set ATHENA_PROC_NUMBER=8
[2025-11-22 13:59:19] Set ATHENA_CORE_NUMBER=8
[2025-11-22 13:59:19] Starting ATLAS job with PandaID=6893887707
[2025-11-22 13:59:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 09:05:30]  *** The last 200 lines of the pilot log: ***
[2025-11-23 09:05:30] 2025-11-23 14:04:34,661 | INFO     | monitor loop #4897: job 0:6893887707 is in state 'finished'
[2025-11-23 09:05:30] 2025-11-23 14:04:34,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:05:30] 2025-11-23 14:04:35,068 | INFO     | time since job start (68705s) is within the limit (172800.0s)
[2025-11-23 09:05:30] 2025-11-23 14:04:36,767 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 09:05:30] 2025-11-23 14:04:36,770 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2427.9583333333335
[2025-11-23 09:05:30] 2025-11-23 14:04:36,773 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893887707/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 09:05:30] 2025-11-23 14:04:36,774 | INFO     | extracted standard info from prmon json
[2025-11-23 09:05:30] 2025-11-23 14:04:36,774 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 09:05:30] 2025-11-23 14:04:36,774 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 09:05:30] 2025-11-23 14:04:36,797 | INFO     | fitting pss+swap vs Time
[2025-11-23 09:05:30] 2025-11-23 14:04:36,798 | INFO     | sum of square deviations: 442682570450.5259
[2025-11-23 09:05:30] 2025-11-23 14:04:36,842 | INFO     | sum of deviations: 2236002819867.6406
[2025-11-23 09:05:30] 2025-11-23 14:04:36,843 | INFO     | mean x: 1763872310.1172292
[2025-11-23 09:05:30] 2025-11-23 14:04:36,843 | INFO     | mean y: 2873206.61634103
[2025-11-23 09:05:30] 2025-11-23 14:04:36,843 | INFO     | intersect: -8906498254.055065
[2025-11-23 09:05:30] 2025-11-23 14:04:36,845 | INFO     | chi2: 5.496541986744831
[2025-11-23 09:05:30] 2025-11-23 14:04:36,846 | INFO     | sum of square deviations: 436811723506.1128
[2025-11-23 09:05:30] 2025-11-23 14:04:36,890 | INFO     | sum of deviations: 2574199526109.8193
[2025-11-23 09:05:30] 2025-11-23 14:04:36,890 | INFO     | mean x: 1763872157.6199822
[2025-11-23 09:05:30] 2025-11-23 14:04:36,890 | INFO     | mean y: 2881988.8563782335
[2025-11-23 09:05:30] 2025-11-23 14:04:36,890 | INFO     | intersect: -10391891383.566904
[2025-11-23 09:05:30] 2025-11-23 14:04:36,892 | INFO     | chi2: 2.8786437403607295
[2025-11-23 09:05:30] 2025-11-23 14:04:36,892 | INFO     | current chi2=2.8786437403607295 (change=47.62809513139873 %)
[2025-11-23 09:05:30] 2025-11-23 14:04:36,894 | INFO     | sum of square deviations: 430993017074.1826
[2025-11-23 09:05:30] 2025-11-23 14:04:36,936 | INFO     | sum of deviations: 2674597875234.35
[2025-11-23 09:05:30] 2025-11-23 14:04:36,936 | INFO     | mean x: 1763872005.1227598
[2025-11-23 09:05:30] 2025-11-23 14:04:36,936 | INFO     | mean y: 2884615.690860215
[2025-11-23 09:05:30] 2025-11-23 14:04:36,936 | INFO     | intersect: -10943112489.117645
[2025-11-23 09:05:30] 2025-11-23 14:04:36,938 | INFO     | chi2: 2.464528032963517
[2025-11-23 09:05:30] 2025-11-23 14:04:36,938 | INFO     | current chi2=2.464528032963517 (change=14.385792225380372 %)
[2025-11-23 09:05:30] 2025-11-23 14:04:36,938 | INFO     | right removable region: 1115
[2025-11-23 09:05:30] 2025-11-23 14:04:36,940 | INFO     | sum of square deviations: 436811299556.1125
[2025-11-23 09:05:30] 2025-11-23 14:04:36,983 | INFO     | sum of deviations: 1941272405764.3274
[2025-11-23 09:05:30] 2025-11-23 14:04:36,983 | INFO     | mean x: 1763872462.6199822
[2025-11-23 09:05:30] 2025-11-23 14:04:36,983 | INFO     | mean y: 2880853.3693131134
[2025-11-23 09:05:30] 2025-11-23 14:04:36,984 | INFO     | intersect: -7836103491.704563
[2025-11-23 09:05:30] 2025-11-23 14:04:36,985 | INFO     | chi2: 3.4433512866920615
[2025-11-23 09:05:30] 2025-11-23 14:04:36,985 | INFO     | current chi2=3.4433512866920615 (change=37.35422571144068 %)
[2025-11-23 09:05:30] 2025-11-23 14:04:36,987 | INFO     | sum of square deviations: 430992169174.1821
[2025-11-23 09:05:30] 2025-11-23 14:04:37,010 | INFO     | sum of deviations: 1845858862099.4182
[2025-11-23 09:05:30] 2025-11-23 14:04:37,010 | INFO     | mean x: 1763872615.1227598
[2025-11-23 09:05:30] 2025-11-23 14:04:37,010 | INFO     | mean y: 2883353.3181003584
[2025-11-23 09:05:30] 2025-11-23 14:04:37,010 | INFO     | intersect: -7551453201.049765
[2025-11-23 09:05:30] 2025-11-23 14:04:37,011 | INFO     | chi2: 3.337401958800034
[2025-11-23 09:05:30] 2025-11-23 14:04:37,011 | INFO     | current chi2=3.337401958800034 (change=3.0769247477451067 %)
[2025-11-23 09:05:30] 2025-11-23 14:04:37,011 | INFO     | left removable region: 20
[2025-11-23 09:05:30] 2025-11-23 14:04:37,012 | INFO     | sum of square deviations: 407116947164.1503
[2025-11-23 09:05:30] 2025-11-23 14:04:37,045 | INFO     | sum of deviations: 2143947723449.2097
[2025-11-23 09:05:30] 2025-11-23 14:04:37,045 | INFO     | mean x: 1763872584.63379
[2025-11-23 09:05:30] 2025-11-23 14:04:37,045 | INFO     | mean y: 2898504.1726027397
[2025-11-23 09:05:30] 2025-11-23 14:04:37,045 | INFO     | intersect: -9285957286.827713
[2025-11-23 09:05:30] 2025-11-23 14:04:37,047 | INFO     | chi2: 0.22904926997161787
[2025-11-23 09:05:30] 2025-11-23 14:04:37,047 | INFO     | current memory leak: 5.27 B/s (using 1095 data points, chi2=0.23)
[2025-11-23 09:05:30] 2025-11-23 14:04:37,048 | INFO     | could have reported an average CPU frequency of 2627 MHz (41 samples)
[2025-11-23 09:05:30] 2025-11-23 14:04:37,049 | INFO     | ..............................
[2025-11-23 09:05:30] 2025-11-23 14:04:37,049 | INFO     | . Timing measurements:
[2025-11-23 09:05:30] 2025-11-23 14:04:37,049 | INFO     | . get job = 0 s
[2025-11-23 09:05:30] 2025-11-23 14:04:37,049 | INFO     | . initial setup = 2 s
[2025-11-23 09:05:30] 2025-11-23 14:04:37,049 | INFO     | . payload setup = 5 s
[2025-11-23 09:05:30] 2025-11-23 14:04:37,049 | INFO     | . stage-in = 0 s
[2025-11-23 09:05:30] 2025-11-23 14:04:37,050 | INFO     | . payload execution = 68666 s
[2025-11-23 09:05:30] 2025-11-23 14:04:37,050 | INFO     | . stage-out = 4 s
[2025-11-23 09:05:30] 2025-11-23 14:04:37,050 | INFO     | . log creation = 0 s
[2025-11-23 09:05:30] 2025-11-23 14:04:37,050 | INFO     | ..............................
[2025-11-23 09:05:30] 2025-11-23 14:04:37,078 | INFO     | time since job start (68707s) is within the limit (172800.0s)
[2025-11-23 09:05:30] 2025-11-23 14:04:37,198 | INFO     | 
[2025-11-23 09:05:30] 2025-11-23 14:04:37,199 | INFO     | job summary report
[2025-11-23 09:05:30] 2025-11-23 14:04:37,199 | INFO     | --------------------------------------------------
[2025-11-23 09:05:30] 2025-11-23 14:04:37,199 | INFO     | PanDA job id: 6893887707
[2025-11-23 09:05:30] 2025-11-23 14:04:37,199 | INFO     | task id: 47523449
[2025-11-23 09:05:30] 2025-11-23 14:04:37,199 | INFO     | errors: (none)
[2025-11-23 09:05:30] 2025-11-23 14:04:37,199 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 09:05:30] 2025-11-23 14:04:37,199 | INFO     | pilot state: finished 
[2025-11-23 09:05:30] 2025-11-23 14:04:37,199 | INFO     | transexitcode: 0
[2025-11-23 09:05:30] 2025-11-23 14:04:37,199 | INFO     | exeerrorcode: 0
[2025-11-23 09:05:30] 2025-11-23 14:04:37,199 | INFO     | exeerrordiag: 
[2025-11-23 09:05:30] 2025-11-23 14:04:37,200 | INFO     | exitcode: 0
[2025-11-23 09:05:30] 2025-11-23 14:04:37,200 | INFO     | exitmsg: OK
[2025-11-23 09:05:30] 2025-11-23 14:04:37,200 | INFO     | cpuconsumptiontime: 537547 s
[2025-11-23 09:05:30] 2025-11-23 14:04:37,200 | INFO     | nevents: 1000
[2025-11-23 09:05:30] 2025-11-23 14:04:37,200 | INFO     | neventsw: 0
[2025-11-23 09:05:30] 2025-11-23 14:04:37,200 | INFO     | pid: 4037
[2025-11-23 09:05:30] 2025-11-23 14:04:37,200 | INFO     | pgrp: 4037
[2025-11-23 09:05:30] 2025-11-23 14:04:37,200 | INFO     | corecount: 8
[2025-11-23 09:05:30] 2025-11-23 14:04:37,200 | INFO     | event service: False
[2025-11-23 09:05:30] 2025-11-23 14:04:37,200 | INFO     | sizes: {0: 2298635, 1: 2298834, 4: 2299096, 12: 2299124, 68675: 2354990, 68676: 2354989, 68681: 2364167, 68684: 2364223, 68690: 2364565}
[2025-11-23 09:05:30] 2025-11-23 14:04:37,200 | INFO     | --------------------------------------------------
[2025-11-23 09:05:30] 2025-11-23 14:04:37,201 | INFO     | 
[2025-11-23 09:05:30] 2025-11-23 14:04:37,201 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 09:05:30] 2025-11-23 14:04:37,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,226 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,226 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,226 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,226 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,226 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,228 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,228 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,228 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,228 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,228 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,228 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 09:05:30] 2025-11-23 14:04:37,229 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,229 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 09:05:30] 2025-11-23 14:04:37,229 | INFO     | job 6893887707 has completed (purged errors)
[2025-11-23 09:05:30] 2025-11-23 14:04:37,229 | INFO     | overall cleanup function is called
[2025-11-23 09:05:30] 2025-11-23 14:04:38,246 | INFO     | --- collectZombieJob: --- 10, [4037]
[2025-11-23 09:05:30] 2025-11-23 14:04:38,247 | INFO     | zombie collector waiting for pid 4037
[2025-11-23 09:05:30] 2025-11-23 14:04:38,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 09:05:30] 2025-11-23 14:04:38,247 | INFO     | collected zombie processes
[2025-11-23 09:05:30] 2025-11-23 14:04:38,247 | INFO     | will attempt to kill all subprocesses of pid=4037
[2025-11-23 09:05:30] 2025-11-23 14:04:38,425 | INFO     | process IDs to be killed: [4037] (in reverse order)
[2025-11-23 09:05:30] 2025-11-23 14:04:38,488 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 09:05:30] 2025-11-23 14:04:38,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 09:05:30] 2025-11-23 14:04:38,494 | INFO     | did not find any defunct processes belonging to 4037
[2025-11-23 09:05:30] 2025-11-23 14:04:38,499 | INFO     | did not find any defunct processes belonging to 4037
[2025-11-23 09:05:30] 2025-11-23 14:04:38,501 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 09:05:30] 2025-11-23 14:04:38,501 | INFO     | ready for new job
[2025-11-23 09:05:30] 2025-11-23 14:04:38,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 09:05:30] 2025-11-23 14:04:38,507 | INFO     | ***************************************
[2025-11-23 09:05:30] 2025-11-23 14:04:38,507 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 09:05:30] 2025-11-23 14:04:38,507 | INFO     | ***************************************
[2025-11-23 09:05:30] 2025-11-23 14:04:38,508 | INFO     | 
[2025-11-23 09:05:30] 2025-11-23 14:04:38,509 | INFO     | architecture information:
[2025-11-23 09:05:30] 2025-11-23 14:04:38,509 | INFO     | executing command: cat /etc/os-release
[2025-11-23 09:05:30] 2025-11-23 14:04:38,522 | INFO     | cat /etc/os-release:
[2025-11-23 09:05:30] NAME="CentOS Linux"
[2025-11-23 09:05:30] VERSION="7 (Core)"
[2025-11-23 09:05:30] ID="centos"
[2025-11-23 09:05:30] ID_LIKE="rhel fedora"
[2025-11-23 09:05:30] VERSION_ID="7"
[2025-11-23 09:05:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 09:05:30] ANSI_COLOR="0;31"
[2025-11-23 09:05:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 09:05:30] HOME_URL="https://www.centos.org/"
[2025-11-23 09:05:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 09:05:30] 
[2025-11-23 09:05:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 09:05:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 09:05:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 09:05:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 09:05:30] 
[2025-11-23 09:05:30] 2025-11-23 14:04:38,522 | INFO     | ***************************************
[2025-11-23 09:05:30] 2025-11-23 14:04:39,025 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 09:05:30] 2025-11-23 14:04:39,039 | INFO     | sufficient remaining disk space (25505562624 B)
[2025-11-23 09:05:30] 2025-11-23 14:04:39,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 09:05:30] 2025-11-23 14:04:39,040 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 09:05:30] 2025-11-23 14:04:39,040 | INFO     | update_server=False
[2025-11-23 09:05:30] 2025-11-23 14:04:39,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 09:05:30] 2025-11-23 14:04:39,041 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 09:05:30] 2025-11-23 14:04:39,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 09:05:30] 2025-11-23 14:04:39,041 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:05:30] 2025-11-23 14:04:39,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:05:30] 2025-11-23 14:04:39,042 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 09:05:30] 2025-11-23 14:04:39,042 | INFO     | aborting loop
[2025-11-23 09:05:30] 2025-11-23 14:04:39,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 09:05:30] 2025-11-23 14:04:39,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 09:05:30] 2025-11-23 14:04:39,387 | INFO     | all job control threads have been joined
[2025-11-23 09:05:30] 2025-11-23 14:04:39,568 | INFO     | all data control threads have been joined
[2025-11-23 09:05:30] 2025-11-23 14:04:40,042 | INFO     | [job] retrieve thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:40,048 | INFO     | [job] queue monitor thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:40,048 | INFO     | [job] job monitor thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:40,051 | INFO     | all payload control threads have been joined
[2025-11-23 09:05:30] 2025-11-23 14:04:40,187 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:40,250 | INFO     | [data] copytool_in thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:40,392 | INFO     | [job] control thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:40,573 | INFO     | [data] control thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:40,996 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:41,045 | INFO     | [data] copytool_out thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:41,056 | INFO     | [payload] control thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:41,164 | INFO     | [payload] validate_post thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:41,410 | INFO     | [job] validate thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:41,411 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:41,414 | INFO     | [payload] failed_post thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:41,415 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:04:41,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 09:05:30] 2025-11-23 14:04:45,836 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 09:05:30] 2025-11-23 14:05:24,321 | INFO     | [monitor] cgroup control has ended
[2025-11-23 09:05:30] 2025-11-23 14:05:25,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820352870208)>', '<ExcThread(monitor, started 139819640420096)>']
[2025-11-23 09:05:30] 2025-11-23 14:05:26,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 09:05:30] 2025-11-23 14:05:26,271 | INFO     | [monitor] control thread has ended
[2025-11-23 09:05:30] 2025-11-23 14:05:30,593 | INFO     | all workflow threads have been joined
[2025-11-23 09:05:30] 2025-11-23 14:05:30,593 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 09:05:30] 2025-11-23 14:05:30,594 | INFO     | traces error code: 0
[2025-11-23 09:05:30] 2025-11-23 14:05:30,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 09:05:30] 2025-11-23 14:05:30,700 [wrapper] ==== pilot stdout END ====
[2025-11-23 09:05:30] 2025-11-23 14:05:30,702 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 09:05:30] 2025-11-23 14:05:30,704 [wrapper] pilotpid: 29940
[2025-11-23 09:05:30] 2025-11-23 14:05:30,707 [wrapper] Pilot exit status: 0
[2025-11-23 09:05:30] 2025-11-23 14:05:30,716 [wrapper] pandaids: 6893887707
[2025-11-23 09:05:30] 2025-11-23 14:05:30,756 [wrapper] cleanup supervisor_pilot 18146 29941
[2025-11-23 09:05:30] 2025-11-23 14:05:30,759 [wrapper] Test setup, not cleaning
[2025-11-23 09:05:30] 2025-11-23 14:05:30,761 [wrapper] apfmon messages muted
[2025-11-23 09:05:30] 2025-11-23 14:05:30,763 [wrapper] ==== wrapper stdout END ====
[2025-11-23 09:05:30] 2025-11-23 14:05:30,766 [wrapper] ==== wrapper stderr END ====
[2025-11-23 09:05:30]  *** Error codes and diagnostics ***
[2025-11-23 09:05:30]     "exeErrorCode": 0,
[2025-11-23 09:05:30]     "exeErrorDiag": "",
[2025-11-23 09:05:30]     "pilotErrorCode": 0,
[2025-11-23 09:05:30]     "pilotErrorDiag": "",
[2025-11-23 09:05:30]  *** Listing of results directory ***
[2025-11-23 09:05:30] total 1313500
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 18:11 pilot3.tar.gz
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 18:40 queuedata.json
[2025-11-23 09:05:30] -rwx------ 1 boincer umatlas     36292 Nov 20 18:41 runpilot2-wrapper.sh
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas       100 Nov 22 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 09:05:30] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 13:59 run_atlas
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas       105 Nov 22 13:59 job.xml
[2025-11-23 09:05:30] -rw-r--r-- 2 boincer umatlas 409996141 Nov 22 13:59 EVNT.47493127._000984.pool.root.1
[2025-11-23 09:05:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 13:59 start_atlas.sh
[2025-11-23 09:05:30] drwxrwx--x 2 boincer umatlas      4096 Nov 22 13:59 shared
[2025-11-23 09:05:30] -rw-r--r-- 2 boincer umatlas    590106 Nov 22 13:59 input.tar.gz
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas         0 Nov 22 13:59 boinc_lockfile
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 13:59 pandaJob.out
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas        57 Nov 22 13:59 setup.sh.local
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas    989784 Nov 22 13:59 agis_schedconf.cvmfs.json
[2025-11-23 09:05:30] drwx------ 5 boincer umatlas      4096 Nov 22 13:59 pilot3
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas       533 Nov 23 08:54 boinc_task_state.xml
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 09:02 init_data.xml
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas 907520233 Nov 23 09:03 HITS.47523449._009835.pool.root.1
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas      1069 Nov 23 09:04 memory_monitor_summary.json
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas        95 Nov 23 09:04 pilot_heartbeat.json
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas   1526164 Nov 23 09:04 agis_ddmendpoints.agis.ALL.json
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas   2297862 Nov 23 09:04 log.47523449._009835.job.log.tgz.1
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas      8653 Nov 23 09:04 heartbeat.json
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 09:05 boinc_mmap_file
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas        29 Nov 23 09:05 wrapper_checkpoint.txt
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas      4552 Nov 23 09:05 pilotlog.txt
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas   9493704 Nov 23 09:05 log.47523449._009835.job.log.1
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas       353 Nov 23 09:05 output.list
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas       620 Nov 23 09:05 runtime_log
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas  11806720 Nov 23 09:05 result.tar.gz
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas       668 Nov 23 09:05 s5cMDmFSTg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKgIKDmmpm3sm.diag
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 09:05 runtime_log.err
[2025-11-23 09:05:30] -rw-r--r-- 1 boincer umatlas     21258 Nov 23 09:05 stderr.txt
[2025-11-23 09:05:30] HITS file was successfully produced:
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas 907520233 Nov 23 09:03 shared/HITS.pool.root.1
[2025-11-23 09:05:30]  *** Contents of shared directory: ***
[2025-11-23 09:05:30] total 1298776
[2025-11-23 09:05:30] -rw-r--r-- 2 boincer umatlas 409996141 Nov 22 13:59 ATLAS.root_0
[2025-11-23 09:05:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 13:59 start_atlas.sh
[2025-11-23 09:05:30] -rw-r--r-- 2 boincer umatlas    590106 Nov 22 13:59 input.tar.gz
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas 907520233 Nov 23 09:03 HITS.pool.root.1
[2025-11-23 09:05:30] -rw------- 1 boincer umatlas  11806720 Nov 23 09:05 result.tar.gz
09:05:32 (26244): run_atlas exited; CPU time 537095.976736
09:05:32 (26244): called boinc_finish(0)

</stderr_txt>
]]>

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