Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:13:46 (5617): wrapper (7.7.26015): starting
06:13:46 (5617): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 06:13:46] Arguments: --nthreads 8
[2025-11-25 06:13:46] Threads: 8
[2025-11-25 06:13:46] Checking for CVMFS
[2025-11-25 06:13:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 06:13:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 06:13:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 06:13:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 06:13:49] 2.11.2.0 22848 283460 142824 153271 0 251 24191257 25165824 4552 130560 10 144746124 99.887 77213496 2914 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 06:13:49] CVMFS is ok
[2025-11-25 06:13:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 06:13:50] Checking for apptainer binary...
[2025-11-25 06:13:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 06:13:50] Running /usr/bin/apptainer --version
[2025-11-25 06:13:50] apptainer version 1.3.2-1.el7
[2025-11-25 06:13:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 06:14:15] cg-vwn482.simple-grid.lan
[2025-11-25 06:14:15] apptainer works
[2025-11-25 06:14:15] Set ATHENA_PROC_NUMBER=8
[2025-11-25 06:14:15] Set ATHENA_CORE_NUMBER=8
[2025-11-25 06:14:15] Starting ATLAS job with PandaID=6893861575
[2025-11-25 06:14:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 04:56:47]  *** The last 200 lines of the pilot log: ***
[2025-11-26 04:56:47] 2025-11-26 03:55:46,352 | INFO     | time since job start (81632s) is within the limit (172800.0s)
[2025-11-26 04:56:47] 2025-11-26 03:55:47,042 | INFO     | monitor loop #5462: job 0:6893861575 is in state 'finished'
[2025-11-26 04:56:47] 2025-11-26 03:55:47,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:56:47] 2025-11-26 03:55:48,361 | INFO     | time since job start (81634s) is within the limit (172800.0s)
[2025-11-26 04:56:47] 2025-11-26 03:55:49,551 | INFO     | monitor loop #5463: job 0:6893861575 is in state 'finished'
[2025-11-26 04:56:47] 2025-11-26 03:55:49,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:56:47] 2025-11-26 03:55:50,368 | INFO     | time since job start (81636s) is within the limit (172800.0s)
[2025-11-26 04:56:47] 2025-11-26 03:55:52,062 | INFO     | monitor loop #5464: job 0:6893861575 is in state 'finished'
[2025-11-26 04:56:47] 2025-11-26 03:55:52,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:56:47] 2025-11-26 03:55:52,375 | INFO     | time since job start (81638s) is within the limit (172800.0s)
[2025-11-26 04:56:47] 2025-11-26 03:55:54,387 | INFO     | time since job start (81640s) is within the limit (172800.0s)
[2025-11-26 04:56:47] 2025-11-26 03:55:54,573 | INFO     | monitor loop #5465: job 0:6893861575 is in state 'finished'
[2025-11-26 04:56:47] 2025-11-26 03:55:54,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:56:47] 2025-11-26 03:55:56,395 | INFO     | time since job start (81642s) is within the limit (172800.0s)
[2025-11-26 04:56:47] 2025-11-26 03:55:57,081 | INFO     | monitor loop #5466: job 0:6893861575 is in state 'finished'
[2025-11-26 04:56:47] 2025-11-26 03:55:57,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:56:47] 2025-11-26 03:55:57,255 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 04:56:47] 2025-11-26 03:55:57,257 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-26 04:56:47] 2025-11-26 03:55:57,260 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6893861575/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 04:56:47] 2025-11-26 03:55:57,260 | INFO     | extracted standard info from prmon json
[2025-11-26 04:56:47] 2025-11-26 03:55:57,260 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 04:56:47] 2025-11-26 03:55:57,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 04:56:47] 2025-11-26 03:55:57,286 | INFO     | fitting pss+swap vs Time
[2025-11-26 04:56:47] 2025-11-26 03:55:57,288 | INFO     | sum of square deviations: 739432325952.6934
[2025-11-26 04:56:47] 2025-11-26 03:55:57,350 | INFO     | sum of deviations: 1523674017814.6716
[2025-11-26 04:56:47] 2025-11-26 03:55:57,350 | INFO     | mean x: 1764088490.6070359
[2025-11-26 04:56:47] 2025-11-26 03:55:57,351 | INFO     | mean y: 2859953.4603293412
[2025-11-26 04:56:47] 2025-11-26 03:55:57,351 | INFO     | intersect: -3632220234.3049607
[2025-11-26 04:56:47] 2025-11-26 03:55:57,352 | INFO     | chi2: 16.09414210926953
[2025-11-26 04:56:47] 2025-11-26 03:55:57,354 | INFO     | sum of square deviations: 731161812661.541
[2025-11-26 04:56:47] 2025-11-26 03:55:57,399 | INFO     | sum of deviations: 1963609667843.7493
[2025-11-26 04:56:47] 2025-11-26 03:55:57,399 | INFO     | mean x: 1764088338.1111946
[2025-11-26 04:56:47] 2025-11-26 03:55:57,399 | INFO     | mean y: 2868064.2314049588
[2025-11-26 04:56:47] 2025-11-26 03:55:57,399 | INFO     | intersect: -4734771204.750837
[2025-11-26 04:56:47] 2025-11-26 03:55:57,401 | INFO     | chi2: 12.90688536976693
[2025-11-26 04:56:47] 2025-11-26 03:55:57,401 | INFO     | current chi2=12.90688536976693 (change=19.803831219228996 %)
[2025-11-26 04:56:47] 2025-11-26 03:55:57,401 | INFO     | right removable region: 1330
[2025-11-26 04:56:47] 2025-11-26 03:55:57,403 | INFO     | sum of square deviations: 731160910471.5428
[2025-11-26 04:56:47] 2025-11-26 03:55:57,459 | INFO     | sum of deviations: 1108859223328.3118
[2025-11-26 04:56:47] 2025-11-26 03:55:57,460 | INFO     | mean x: 1764088643.1111946
[2025-11-26 04:56:47] 2025-11-26 03:55:57,460 | INFO     | mean y: 2867597.1465063863
[2025-11-26 04:56:47] 2025-11-26 03:55:57,460 | INFO     | intersect: -2672502399.6179857
[2025-11-26 04:56:47] 2025-11-26 03:55:57,461 | INFO     | chi2: 13.505614248609252
[2025-11-26 04:56:47] 2025-11-26 03:55:57,461 | INFO     | current chi2=13.505614248609252 (change=16.083664746376247 %)
[2025-11-26 04:56:47] 2025-11-26 03:55:57,461 | INFO     | left removable region: 10
[2025-11-26 04:56:47] 2025-11-26 03:55:57,463 | INFO     | sum of square deviations: 713182953192.2662
[2025-11-26 04:56:47] 2025-11-26 03:55:57,507 | INFO     | sum of deviations: 1552467047363.9558
[2025-11-26 04:56:47] 2025-11-26 03:55:57,507 | INFO     | mean x: 1764088612.615909
[2025-11-26 04:56:47] 2025-11-26 03:55:57,507 | INFO     | mean y: 2879275.4022727273
[2025-11-26 04:56:47] 2025-11-26 03:55:57,507 | INFO     | intersect: -3837214528.659639
[2025-11-26 04:56:47] 2025-11-26 03:55:57,509 | INFO     | chi2: 9.4973660529522
[2025-11-26 04:56:47] 2025-11-26 03:55:57,509 | INFO     | current memory leak: 2.18 B/s (using 1320 data points, chi2=9.50)
[2025-11-26 04:56:47] 2025-11-26 03:55:57,511 | INFO     | could have reported an average CPU frequency of 2249 MHz (45 samples)
[2025-11-26 04:56:47] 2025-11-26 03:55:57,511 | INFO     | ..............................
[2025-11-26 04:56:47] 2025-11-26 03:55:57,511 | INFO     | . Timing measurements:
[2025-11-26 04:56:47] 2025-11-26 03:55:57,511 | INFO     | . get job = 0 s
[2025-11-26 04:56:47] 2025-11-26 03:55:57,511 | INFO     | . initial setup = 2 s
[2025-11-26 04:56:47] 2025-11-26 03:55:57,511 | INFO     | . payload setup = 9 s
[2025-11-26 04:56:47] 2025-11-26 03:55:57,511 | INFO     | . stage-in = 0 s
[2025-11-26 04:56:47] 2025-11-26 03:55:57,511 | INFO     | . payload execution = 81501 s
[2025-11-26 04:56:47] 2025-11-26 03:55:57,511 | INFO     | . stage-out = 4 s
[2025-11-26 04:56:47] 2025-11-26 03:55:57,511 | INFO     | . log creation = 1 s
[2025-11-26 04:56:47] 2025-11-26 03:55:57,511 | INFO     | ..............................
[2025-11-26 04:56:47] 2025-11-26 03:55:57,645 | INFO     | 
[2025-11-26 04:56:47] 2025-11-26 03:55:57,645 | INFO     | job summary report
[2025-11-26 04:56:47] 2025-11-26 03:55:57,645 | INFO     | --------------------------------------------------
[2025-11-26 04:56:47] 2025-11-26 03:55:57,645 | INFO     | PanDA job id: 6893861575
[2025-11-26 04:56:47] 2025-11-26 03:55:57,645 | INFO     | task id: 47523449
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | errors: (none)
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | pilot state: finished 
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | transexitcode: 0
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | exeerrorcode: 0
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | exeerrordiag: 
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | exitcode: 0
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | exitmsg: OK
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | cpuconsumptiontime: 306258 s
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | nevents: 1000
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | neventsw: 0
[2025-11-26 04:56:47] 2025-11-26 03:55:57,646 | INFO     | pid: 15958
[2025-11-26 04:56:47] 2025-11-26 03:55:57,647 | INFO     | pgrp: 15958
[2025-11-26 04:56:47] 2025-11-26 03:55:57,647 | INFO     | corecount: 8
[2025-11-26 04:56:47] 2025-11-26 03:55:57,647 | INFO     | event service: False
[2025-11-26 04:56:47] 2025-11-26 03:55:57,647 | INFO     | sizes: {0: 2284088, 1: 2284287, 12: 2284287, 14: 2284577, 23: 2284605, 81514: 2340798, 81519: 2349825, 81520: 2349881, 81613: 2350127}
[2025-11-26 04:56:47] 2025-11-26 03:55:57,647 | INFO     | --------------------------------------------------
[2025-11-26 04:56:47] 2025-11-26 03:55:57,647 | INFO     | 
[2025-11-26 04:56:47] 2025-11-26 03:55:57,647 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-26 04:56:47] 2025-11-26 03:55:58,203 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,204 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,204 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,204 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,205 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 04:56:47] 2025-11-26 03:55:58,206 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,206 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 04:56:47] 2025-11-26 03:55:58,206 | INFO     | job 6893861575 has completed (purged errors)
[2025-11-26 04:56:47] 2025-11-26 03:55:58,206 | INFO     | overall cleanup function is called
[2025-11-26 04:56:47] 2025-11-26 03:55:59,227 | INFO     | --- collectZombieJob: --- 10, [15958]
[2025-11-26 04:56:47] 2025-11-26 03:55:59,227 | INFO     | zombie collector waiting for pid 15958
[2025-11-26 04:56:47] 2025-11-26 03:55:59,227 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 04:56:47] 2025-11-26 03:55:59,227 | INFO     | collected zombie processes
[2025-11-26 04:56:47] 2025-11-26 03:55:59,228 | INFO     | will attempt to kill all subprocesses of pid=15958
[2025-11-26 04:56:47] 2025-11-26 03:55:59,329 | INFO     | process IDs to be killed: [15958] (in reverse order)
[2025-11-26 04:56:47] 2025-11-26 03:55:59,940 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 04:56:47] 2025-11-26 03:55:59,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 04:56:47] 2025-11-26 03:55:59,944 | INFO     | did not find any defunct processes belonging to 15958
[2025-11-26 04:56:47] 2025-11-26 03:55:59,946 | INFO     | did not find any defunct processes belonging to 15958
[2025-11-26 04:56:47] 2025-11-26 03:55:59,972 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 04:56:47] 2025-11-26 03:55:59,972 | INFO     | ready for new job
[2025-11-26 04:56:47] 2025-11-26 03:55:59,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 04:56:47] 2025-11-26 03:55:59,979 | INFO     | ***************************************
[2025-11-26 04:56:47] 2025-11-26 03:55:59,979 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 04:56:47] 2025-11-26 03:55:59,979 | INFO     | ***************************************
[2025-11-26 04:56:47] 2025-11-26 03:55:59,979 | INFO     | 
[2025-11-26 04:56:47] 2025-11-26 03:55:59,980 | INFO     | pilot is running in a VM
[2025-11-26 04:56:47] 2025-11-26 03:55:59,980 | INFO     | architecture information:
[2025-11-26 04:56:47] 2025-11-26 03:55:59,993 | INFO     | executing command: cat /etc/os-release
[2025-11-26 04:56:47] 2025-11-26 03:56:00,189 | INFO     | cat /etc/os-release:
[2025-11-26 04:56:47] NAME="CentOS Linux"
[2025-11-26 04:56:47] VERSION="7 (Core)"
[2025-11-26 04:56:47] ID="centos"
[2025-11-26 04:56:47] ID_LIKE="rhel fedora"
[2025-11-26 04:56:47] VERSION_ID="7"
[2025-11-26 04:56:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 04:56:47] ANSI_COLOR="0;31"
[2025-11-26 04:56:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 04:56:47] HOME_URL="https://www.centos.org/"
[2025-11-26 04:56:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 04:56:47] 
[2025-11-26 04:56:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 04:56:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 04:56:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 04:56:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 04:56:47] 
[2025-11-26 04:56:47] 2025-11-26 03:56:00,190 | INFO     | ***************************************
[2025-11-26 04:56:47] 2025-11-26 03:56:00,693 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-26 04:56:47] 2025-11-26 03:56:00,877 | INFO     | sufficient remaining disk space (495588474880 B)
[2025-11-26 04:56:47] 2025-11-26 03:56:00,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 04:56:47] 2025-11-26 03:56:00,877 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 04:56:47] 2025-11-26 03:56:00,877 | INFO     | update_server=False
[2025-11-26 04:56:47] 2025-11-26 03:56:00,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 04:56:47] 2025-11-26 03:56:00,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 04:56:47] 2025-11-26 03:56:00,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:56:47] 2025-11-26 03:56:00,880 | INFO     | aborting loop
[2025-11-26 04:56:47] 2025-11-26 03:56:01,394 | INFO     | all job control threads have been joined
[2025-11-26 04:56:47] 2025-11-26 03:56:01,558 | INFO     | all data control threads have been joined
[2025-11-26 04:56:47] 2025-11-26 03:56:01,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 04:56:47] 2025-11-26 03:56:01,884 | INFO     | [job] retrieve thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:01,886 | INFO     | [job] job monitor thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:02,201 | INFO     | [payload] failed_post thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:02,261 | INFO     | [payload] validate_post thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:02,367 | INFO     | all payload control threads have been joined
[2025-11-26 04:56:47] 2025-11-26 03:56:02,400 | INFO     | [job] control thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:02,564 | INFO     | [data] control thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:02,573 | INFO     | [job] validate thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:02,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:02,651 | INFO     | [data] copytool_in thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:02,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:56:47] 2025-11-26 03:56:03,089 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:03,124 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:03,174 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:03,373 | INFO     | [payload] control thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:03,606 | INFO     | [data] copytool_out thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:03,667 | INFO     | [job] queue monitor thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:04,889 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 04:56:47] 2025-11-26 03:56:29,597 | INFO     | PID=9463 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 04:56:47] 2025-11-26 03:56:29,597 | INFO     | .. there are 9 such processes running
[2025-11-26 04:56:47] 2025-11-26 03:56:29,597 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 04:56:47] 2025-11-26 03:56:29,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 04:56:47] 2025-11-26 03:56:29,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 04:56:47] 2025-11-26 03:56:36,207 | INFO     | [monitor] cgroup control has ended
[2025-11-26 04:56:47] 2025-11-26 03:56:37,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140634631919424)>', '<ExcThread(monitor, started 140634040022784)>']
[2025-11-26 04:56:47] 2025-11-26 03:56:37,646 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 04:56:47] 2025-11-26 03:56:37,646 | INFO     | [monitor] control thread has ended
[2025-11-26 04:56:47] 2025-11-26 03:56:42,525 | INFO     | all workflow threads have been joined
[2025-11-26 04:56:47] 2025-11-26 03:56:42,525 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 04:56:47] 2025-11-26 03:56:42,526 | INFO     | traces error code: 0
[2025-11-26 04:56:47] 2025-11-26 03:56:42,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 04:56:47] 2025-11-26 03:56:42,849 [wrapper] ==== pilot stdout END ====
[2025-11-26 04:56:47] 2025-11-26 03:56:42,927 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 04:56:47] 2025-11-26 03:56:43,011 [wrapper] pilotpid: 9463
[2025-11-26 04:56:47] 2025-11-26 03:56:43,100 [wrapper] Pilot exit status: 0
[2025-11-26 04:56:47] 2025-11-26 03:56:43,497 [wrapper] pandaids: 6893861575
[2025-11-26 04:56:47] 2025-11-26 03:56:44,641 [wrapper] cleanup supervisor_pilot  3337 9464
[2025-11-26 04:56:47] 2025-11-26 03:56:44,749 [wrapper] Test setup, not cleaning
[2025-11-26 04:56:47] 2025-11-26 03:56:44,849 [wrapper] apfmon messages muted
[2025-11-26 04:56:47] 2025-11-26 03:56:44,932 [wrapper] ==== wrapper stdout END ====
[2025-11-26 04:56:47] 2025-11-26 03:56:45,023 [wrapper] ==== wrapper stderr END ====
[2025-11-26 04:56:47]  *** Error codes and diagnostics ***
[2025-11-26 04:56:47]     "exeErrorCode": 0,
[2025-11-26 04:56:47]     "exeErrorDiag": "",
[2025-11-26 04:56:47]     "pilotErrorCode": 0,
[2025-11-26 04:56:47]     "pilotErrorDiag": "",
[2025-11-26 04:56:47]  *** Listing of results directory ***
[2025-11-26 04:56:47] total 1338292
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc    576529 Nov 20 14:50 pilot3.tar.gz
[2025-11-26 04:56:47] -rwx------. 1 boinc boinc     36292 Nov 20 15:00 runpilot2-wrapper.sh
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc      5112 Nov 20 15:00 queuedata.json
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc       100 Nov 25 06:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 04:56:47] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 06:13 run_atlas
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc       105 Nov 25 06:13 job.xml
[2025-11-26 04:56:47] -rw-r--r--. 2 boinc boinc 411194440 Nov 25 06:13 EVNT.47493127._000575.pool.root.1
[2025-11-26 04:56:47] -rw-r--r--. 2 boinc boinc     15847 Nov 25 06:13 start_atlas.sh
[2025-11-26 04:56:47] drwxrwx--x. 2 boinc boinc        68 Nov 25 06:13 shared
[2025-11-26 04:56:47] -rw-r--r--. 2 boinc boinc    590098 Nov 25 06:13 input.tar.gz
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc      6392 Nov 25 06:13 init_data.xml
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc         0 Nov 25 06:13 boinc_lockfile
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc      2785 Nov 25 06:14 pandaJob.out
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc    991801 Nov 25 06:15 agis_schedconf.cvmfs.json
[2025-11-26 04:56:47] drwx------. 5 boinc boinc      4096 Nov 25 06:15 pilot3
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc       533 Nov 26 04:31 boinc_task_state.xml
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc 928682185 Nov 26 04:52 HITS.47523449._005749.pool.root.1
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc      1033 Nov 26 04:54 memory_monitor_summary.json
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc   1516240 Nov 26 04:54 agis_ddmendpoints.agis.ALL.json
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc   2431530 Nov 26 04:54 log.47523449._005749.job.log.tgz.1
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc        95 Nov 26 04:55 pilot_heartbeat.json
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc      7255 Nov 26 04:55 heartbeat.json
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc      8192 Nov 26 04:56 boinc_mmap_file
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc        29 Nov 26 04:56 wrapper_checkpoint.txt
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc      4883 Nov 26 04:56 pilotlog.txt
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc  10884011 Nov 26 04:56 log.47523449._005749.job.log.1
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc       353 Nov 26 04:56 output.list
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc       620 Nov 26 04:56 runtime_log
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc  13332480 Nov 26 04:56 result.tar.gz
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc       662 Nov 26 04:56 XYXLDmOOKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmz0HKDm3iuRWo.diag
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc      8817 Nov 26 04:56 runtime_log.err
[2025-11-26 04:56:47] -rw-r--r--. 1 boinc boinc     21409 Nov 26 04:56 stderr.txt
[2025-11-26 04:56:47] HITS file was successfully produced:
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc 928682185 Nov 26 04:52 shared/HITS.pool.root.1
[2025-11-26 04:56:47]  *** Contents of shared directory: ***
[2025-11-26 04:56:47] total 1322096
[2025-11-26 04:56:47] -rw-r--r--. 2 boinc boinc 411194440 Nov 25 06:13 ATLAS.root_0
[2025-11-26 04:56:47] -rw-r--r--. 2 boinc boinc     15847 Nov 25 06:13 start_atlas.sh
[2025-11-26 04:56:47] -rw-r--r--. 2 boinc boinc    590098 Nov 25 06:13 input.tar.gz
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc 928682185 Nov 26 04:52 HITS.pool.root.1
[2025-11-26 04:56:47] -rw-------. 1 boinc boinc  13332480 Nov 26 04:56 result.tar.gz
04:56:48 (5617): run_atlas exited; CPU time 306780.998174
04:56:48 (5617): called boinc_finish(0)

</stderr_txt>
]]>

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