Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:48:43 (14803): wrapper (7.7.26015): starting
13:48:43 (14803): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 13:48:43] Arguments: --nthreads 12
[2025-11-22 13:48:43] Threads: 12
[2025-11-22 13:48:43] Checking for CVMFS
[2025-11-22 13:48:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 13:48:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 13:48:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 13:48:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 13:48:43] 2.11.2.0 2910 33522 93876 153181 3 81 13816482 20275201 1 130560 0 3724399 99.774 1551504 26137 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 13:48:43] CVMFS is ok
[2025-11-22 13:48:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 13:48:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 13:48:43] Further information can be found at the LHC@home message board.
[2025-11-22 13:48:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 13:48:43] Checking for apptainer binary...
[2025-11-22 13:48:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 13:48:43] Running /usr/bin/apptainer --version
[2025-11-22 13:48:43] apptainer version 1.3.2-1.el7
[2025-11-22 13:48:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 13:48:45] c-205-11.aglt2.org
[2025-11-22 13:48:45] apptainer works
[2025-11-22 13:48:45] Set ATHENA_PROC_NUMBER=12
[2025-11-22 13:48:45] Set ATHENA_CORE_NUMBER=12
[2025-11-22 13:48:45] Starting ATLAS job with PandaID=6894290540
[2025-11-22 13:48:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 20:56:49]  *** The last 200 lines of the pilot log: ***
[2025-11-22 20:56:49] 2025-11-23 01:56:06,417 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 20:56:49] 2025-11-23 01:56:06,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 20:56:49] 2025-11-23 01:56:06,423 | INFO     | fitting pss+swap vs Time
[2025-11-22 20:56:49] 2025-11-23 01:56:06,424 | INFO     | sum of square deviations: 22973293614.807133
[2025-11-22 20:56:49] 2025-11-23 01:56:06,428 | INFO     | sum of deviations: 234832293773.8499
[2025-11-22 20:56:49] 2025-11-23 01:56:06,428 | INFO     | mean x: 1763850150.6214285
[2025-11-22 20:56:49] 2025-11-23 01:56:06,428 | INFO     | mean y: 4048534.4833333334
[2025-11-22 20:56:49] 2025-11-23 01:56:06,428 | INFO     | intersect: -18025972919.50652
[2025-11-22 20:56:49] 2025-11-23 01:56:06,429 | INFO     | chi2: 8.538893673413211
[2025-11-22 20:56:49] 2025-11-23 01:56:06,429 | INFO     | sum of square deviations: 22162559084.73244
[2025-11-22 20:56:49] 2025-11-23 01:56:06,433 | INFO     | sum of deviations: 447129379967.3847
[2025-11-22 20:56:49] 2025-11-23 01:56:06,433 | INFO     | mean x: 1763849998.1228917
[2025-11-22 20:56:49] 2025-11-23 01:56:06,433 | INFO     | mean y: 4088438.012048193
[2025-11-22 20:56:49] 2025-11-23 01:56:06,433 | INFO     | intersect: -35581565411.83904
[2025-11-22 20:56:49] 2025-11-23 01:56:06,434 | INFO     | chi2: 4.801936670821205
[2025-11-22 20:56:49] 2025-11-23 01:56:06,434 | INFO     | current chi2=4.801936670821205 (change=43.76394818250793 %)
[2025-11-22 20:56:49] 2025-11-23 01:56:06,434 | INFO     | sum of square deviations: 21371127242.15625
[2025-11-22 20:56:49] 2025-11-23 01:56:06,438 | INFO     | sum of deviations: 585625915417.2247
[2025-11-22 20:56:49] 2025-11-23 01:56:06,438 | INFO     | mean x: 1763849845.6243901
[2025-11-22 20:56:49] 2025-11-23 01:56:06,438 | INFO     | mean y: 4115114.8975609755
[2025-11-22 20:56:49] 2025-11-23 01:56:06,438 | INFO     | intersect: -48330077499.178764
[2025-11-22 20:56:49] 2025-11-23 01:56:06,439 | INFO     | chi2: 3.1633051144709996
[2025-11-22 20:56:49] 2025-11-23 01:56:06,439 | INFO     | current chi2=3.1633051144709996 (change=34.12438915130412 %)
[2025-11-22 20:56:49] 2025-11-23 01:56:06,439 | INFO     | sum of square deviations: 20598765524.577873
[2025-11-22 20:56:49] 2025-11-23 01:56:06,443 | INFO     | sum of deviations: 631039352994.2972
[2025-11-22 20:56:49] 2025-11-23 01:56:06,443 | INFO     | mean x: 1763849693.125926
[2025-11-22 20:56:49] 2025-11-23 01:56:06,443 | INFO     | mean y: 4124024.2098765434
[2025-11-22 20:56:49] 2025-11-23 01:56:06,443 | INFO     | intersect: -54031083464.379845
[2025-11-22 20:56:49] 2025-11-23 01:56:06,444 | INFO     | chi2: 2.7629960343034212
[2025-11-22 20:56:49] 2025-11-23 01:56:06,444 | INFO     | current chi2=2.7629960343034212 (change=12.654772956813625 %)
[2025-11-22 20:56:49] 2025-11-23 01:56:06,444 | INFO     | right removable region: 404
[2025-11-22 20:56:49] 2025-11-23 01:56:06,444 | INFO     | sum of square deviations: 22162527974.732452
[2025-11-22 20:56:49] 2025-11-23 01:56:06,448 | INFO     | sum of deviations: 60078868722.80751
[2025-11-22 20:56:49] 2025-11-23 01:56:06,448 | INFO     | mean x: 1763850303.1228917
[2025-11-22 20:56:49] 2025-11-23 01:56:06,448 | INFO     | mean y: 4081314.493975904
[2025-11-22 20:56:49] 2025-11-23 01:56:06,448 | INFO     | intersect: -4777418834.262575
[2025-11-22 20:56:49] 2025-11-23 01:56:06,449 | INFO     | chi2: 5.9669497473246444
[2025-11-22 20:56:49] 2025-11-23 01:56:06,449 | INFO     | current chi2=5.9669497473246444 (change=30.12034139851862 %)
[2025-11-22 20:56:49] 2025-11-23 01:56:06,450 | INFO     | sum of square deviations: 21371065022.156242
[2025-11-22 20:56:49] 2025-11-23 01:56:06,453 | INFO     | sum of deviations: 25114847621.819252
[2025-11-22 20:56:49] 2025-11-23 01:56:06,453 | INFO     | mean x: 1763850455.6243901
[2025-11-22 20:56:49] 2025-11-23 01:56:06,454 | INFO     | mean y: 4088042.7780487803
[2025-11-22 20:56:49] 2025-11-23 01:56:06,454 | INFO     | intersect: -2068753688.5421562
[2025-11-22 20:56:49] 2025-11-23 01:56:06,454 | INFO     | chi2: 5.908957130089947
[2025-11-22 20:56:49] 2025-11-23 01:56:06,454 | INFO     | current chi2=5.908957130089947 (change=0.9718971952243995 %)
[2025-11-22 20:56:49] 2025-11-23 01:56:06,454 | INFO     | left removable region: 20
[2025-11-22 20:56:49] 2025-11-23 01:56:06,455 | INFO     | sum of square deviations: 17557767475.74745
[2025-11-22 20:56:49] 2025-11-23 01:56:06,458 | INFO     | sum of deviations: 371206968789.5572
[2025-11-22 20:56:49] 2025-11-23 01:56:06,458 | INFO     | mean x: 1763850272.6276042
[2025-11-22 20:56:49] 2025-11-23 01:56:06,458 | INFO     | mean y: 4176444.1927083335
[2025-11-22 20:56:49] 2025-11-23 01:56:06,458 | INFO     | intersect: -37287211199.77388
[2025-11-22 20:56:49] 2025-11-23 01:56:06,459 | INFO     | chi2: 0.04167136765133511
[2025-11-22 20:56:49] 2025-11-23 01:56:06,459 | INFO     | current memory leak: 21.14 B/s (using 384 data points, chi2=0.04)
[2025-11-22 20:56:49] 2025-11-23 01:56:06,459 | INFO     | could have reported an average CPU frequency of 2362 MHz (18 samples)
[2025-11-22 20:56:49] 2025-11-23 01:56:06,459 | INFO     | ..............................
[2025-11-22 20:56:49] 2025-11-23 01:56:06,460 | INFO     | . Timing measurements:
[2025-11-22 20:56:49] 2025-11-23 01:56:06,460 | INFO     | . get job = 0 s
[2025-11-22 20:56:49] 2025-11-23 01:56:06,460 | INFO     | . initial setup = 2 s
[2025-11-22 20:56:49] 2025-11-23 01:56:06,460 | INFO     | . payload setup = 7 s
[2025-11-22 20:56:49] 2025-11-23 01:56:06,460 | INFO     | . stage-in = 0 s
[2025-11-22 20:56:49] 2025-11-23 01:56:06,460 | INFO     | . payload execution = 25588 s
[2025-11-22 20:56:49] 2025-11-23 01:56:06,460 | INFO     | . stage-out = 3 s
[2025-11-22 20:56:49] 2025-11-23 01:56:06,460 | INFO     | . log creation = 0 s
[2025-11-22 20:56:49] 2025-11-23 01:56:06,460 | INFO     | ..............................
[2025-11-22 20:56:49] 2025-11-23 01:56:06,956 | INFO     | 
[2025-11-22 20:56:49] 2025-11-23 01:56:06,956 | INFO     | job summary report
[2025-11-22 20:56:49] 2025-11-23 01:56:06,963 | INFO     | --------------------------------------------------
[2025-11-22 20:56:49] 2025-11-23 01:56:06,963 | INFO     | PanDA job id: 6894290540
[2025-11-22 20:56:49] 2025-11-23 01:56:06,964 | INFO     | task id: 47533967
[2025-11-22 20:56:49] 2025-11-23 01:56:06,964 | INFO     | errors: (none)
[2025-11-22 20:56:49] 2025-11-23 01:56:06,964 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 20:56:49] 2025-11-23 01:56:06,964 | INFO     | pilot state: finished 
[2025-11-22 20:56:49] 2025-11-23 01:56:06,964 | INFO     | transexitcode: 0
[2025-11-22 20:56:49] 2025-11-23 01:56:06,964 | INFO     | exeerrorcode: 0
[2025-11-22 20:56:49] 2025-11-23 01:56:06,964 | INFO     | exeerrordiag: 
[2025-11-22 20:56:49] 2025-11-23 01:56:06,965 | INFO     | exitcode: 0
[2025-11-22 20:56:49] 2025-11-23 01:56:06,965 | INFO     | exitmsg: OK
[2025-11-22 20:56:49] 2025-11-23 01:56:06,965 | INFO     | cpuconsumptiontime: 292787 s
[2025-11-22 20:56:49] 2025-11-23 01:56:06,965 | INFO     | nevents: 1000
[2025-11-22 20:56:49] 2025-11-23 01:56:06,965 | INFO     | neventsw: 0
[2025-11-22 20:56:49] 2025-11-23 01:56:06,965 | INFO     | pid: 25253
[2025-11-22 20:56:49] 2025-11-23 01:56:06,965 | INFO     | pgrp: 25253
[2025-11-22 20:56:49] 2025-11-23 01:56:06,966 | INFO     | corecount: 12
[2025-11-22 20:56:49] 2025-11-23 01:56:06,966 | INFO     | event service: False
[2025-11-22 20:56:49] 2025-11-23 01:56:06,966 | INFO     | sizes: {0: 2298585, 1: 2298784, 6: 2299046, 11: 2299074, 25599: 2336228, 25600: 2336227, 25604: 2345461, 25609: 2345651}
[2025-11-22 20:56:49] 2025-11-23 01:56:06,966 | INFO     | --------------------------------------------------
[2025-11-22 20:56:49] 2025-11-23 01:56:06,966 | INFO     | 
[2025-11-22 20:56:49] 2025-11-23 01:56:06,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 20:56:49] 2025-11-23 01:56:07,023 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,024 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,024 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,024 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,026 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 20:56:49] 2025-11-23 01:56:07,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,027 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 20:56:49] 2025-11-23 01:56:07,027 | INFO     | job 6894290540 has completed (purged errors)
[2025-11-22 20:56:49] 2025-11-23 01:56:07,027 | INFO     | overall cleanup function is called
[2025-11-22 20:56:49] 2025-11-23 01:56:08,042 | INFO     | --- collectZombieJob: --- 10, [25253]
[2025-11-22 20:56:49] 2025-11-23 01:56:08,043 | INFO     | zombie collector waiting for pid 25253
[2025-11-22 20:56:49] 2025-11-23 01:56:08,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 20:56:49] 2025-11-23 01:56:08,043 | INFO     | collected zombie processes
[2025-11-22 20:56:49] 2025-11-23 01:56:08,043 | INFO     | will attempt to kill all subprocesses of pid=25253
[2025-11-22 20:56:49] 2025-11-23 01:56:08,131 | INFO     | process IDs to be killed: [25253] (in reverse order)
[2025-11-22 20:56:49] 2025-11-23 01:56:08,186 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 20:56:49] 2025-11-23 01:56:08,187 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 20:56:49] 2025-11-23 01:56:08,190 | INFO     | did not find any defunct processes belonging to 25253
[2025-11-22 20:56:49] 2025-11-23 01:56:08,194 | INFO     | did not find any defunct processes belonging to 25253
[2025-11-22 20:56:49] 2025-11-23 01:56:08,197 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 20:56:49] 2025-11-23 01:56:08,197 | INFO     | ready for new job
[2025-11-22 20:56:49] 2025-11-23 01:56:08,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 20:56:49] 2025-11-23 01:56:08,199 | INFO     | ***************************************
[2025-11-22 20:56:49] 2025-11-23 01:56:08,199 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 20:56:49] 2025-11-23 01:56:08,200 | INFO     | ***************************************
[2025-11-22 20:56:49] 2025-11-23 01:56:08,200 | INFO     | 
[2025-11-22 20:56:49] 2025-11-23 01:56:08,200 | INFO     | architecture information:
[2025-11-22 20:56:49] 2025-11-23 01:56:08,201 | INFO     | executing command: cat /etc/os-release
[2025-11-22 20:56:49] 2025-11-23 01:56:08,217 | INFO     | cat /etc/os-release:
[2025-11-22 20:56:49] NAME="CentOS Linux"
[2025-11-22 20:56:49] VERSION="7 (Core)"
[2025-11-22 20:56:49] ID="centos"
[2025-11-22 20:56:49] ID_LIKE="rhel fedora"
[2025-11-22 20:56:49] VERSION_ID="7"
[2025-11-22 20:56:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 20:56:49] ANSI_COLOR="0;31"
[2025-11-22 20:56:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 20:56:49] HOME_URL="https://www.centos.org/"
[2025-11-22 20:56:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 20:56:49] 
[2025-11-22 20:56:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 20:56:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 20:56:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 20:56:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 20:56:49] 
[2025-11-22 20:56:49] 2025-11-23 01:56:08,218 | INFO     | ***************************************
[2025-11-22 20:56:49] 2025-11-23 01:56:08,721 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 20:56:49] 2025-11-23 01:56:08,739 | INFO     | sufficient remaining disk space (28266463232 B)
[2025-11-22 20:56:49] 2025-11-23 01:56:08,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 20:56:49] 2025-11-23 01:56:08,739 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 20:56:49] 2025-11-23 01:56:08,739 | INFO     | update_server=False
[2025-11-22 20:56:49] 2025-11-23 01:56:08,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 20:56:49] 2025-11-23 01:56:09,002 | INFO     | all payload control threads have been joined
[2025-11-22 20:56:49] 2025-11-23 01:56:09,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:56:49] 2025-11-23 01:56:09,115 | INFO     | aborting loop
[2025-11-22 20:56:49] 2025-11-23 01:56:09,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 20:56:49] 2025-11-23 01:56:09,598 | INFO     | all data control threads have been joined
[2025-11-22 20:56:49] 2025-11-23 01:56:09,747 | INFO     | [job] retrieve thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:09,793 | INFO     | all job control threads have been joined
[2025-11-22 20:56:49] 2025-11-23 01:56:10,007 | INFO     | [payload] control thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:10,121 | INFO     | [job] job monitor thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:10,141 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:10,433 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:10,449 | INFO     | [data] copytool_in thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:10,485 | INFO     | [payload] failed_post thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:10,603 | INFO     | [data] control thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:10,794 | INFO     | [job] control thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:10,998 | INFO     | [job] validate thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:11,063 | INFO     | [payload] validate_post thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:11,233 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:11,465 | INFO     | [data] copytool_out thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:11,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:56:49] 2025-11-23 01:56:12,035 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 20:56:49] 2025-11-23 01:56:12,556 | INFO     | [job] queue monitor thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:16,036 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:19,396 | INFO     | job.realtimelogging is not enabled
[2025-11-22 20:56:49] 2025-11-23 01:56:20,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 20:56:49] 2025-11-23 01:56:38,778 | INFO     | PID=18846 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 20:56:49] 2025-11-23 01:56:38,779 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 20:56:49] 2025-11-23 01:56:38,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 20:56:49] 2025-11-23 01:56:38,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 20:56:49] 2025-11-23 01:56:42,984 | INFO     | [monitor] cgroup control has ended
[2025-11-22 20:56:49] 2025-11-23 01:56:44,063 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140208738809664)>', '<ExcThread(monitor, started 140207856805632)>']
[2025-11-22 20:56:49] 2025-11-23 01:56:44,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 20:56:49] 2025-11-23 01:56:44,805 | INFO     | [monitor] control thread has ended
[2025-11-22 20:56:49] 2025-11-23 01:56:49,085 | INFO     | all workflow threads have been joined
[2025-11-22 20:56:49] 2025-11-23 01:56:49,089 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 20:56:49] 2025-11-23 01:56:49,090 | INFO     | traces error code: 0
[2025-11-22 20:56:49] 2025-11-23 01:56:49,090 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 20:56:49] 2025-11-23 01:56:49,188 [wrapper] ==== pilot stdout END ====
[2025-11-22 20:56:49] 2025-11-23 01:56:49,191 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 20:56:49] 2025-11-23 01:56:49,195 [wrapper] pilotpid: 18846
[2025-11-22 20:56:49] 2025-11-23 01:56:49,199 [wrapper] Pilot exit status: 0
[2025-11-22 20:56:49] 2025-11-23 01:56:49,214 [wrapper] pandaids: 6894290540
[2025-11-22 20:56:49] 2025-11-23 01:56:49,255 [wrapper] cleanup supervisor_pilot 26886 18847
[2025-11-22 20:56:49] 2025-11-23 01:56:49,260 [wrapper] Test setup, not cleaning
[2025-11-22 20:56:49] 2025-11-23 01:56:49,264 [wrapper] apfmon messages muted
[2025-11-22 20:56:49] 2025-11-23 01:56:49,268 [wrapper] ==== wrapper stdout END ====
[2025-11-22 20:56:49] 2025-11-23 01:56:49,272 [wrapper] ==== wrapper stderr END ====
[2025-11-22 20:56:49]  *** Error codes and diagnostics ***
[2025-11-22 20:56:49]     "exeErrorCode": 0,
[2025-11-22 20:56:49]     "exeErrorDiag": "",
[2025-11-22 20:56:49]     "pilotErrorCode": 0,
[2025-11-22 20:56:49]     "pilotErrorDiag": "",
[2025-11-22 20:56:49]  *** Listing of results directory ***
[2025-11-22 20:56:49] total 1329300
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 06:32 pilot3.tar.gz
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 06:46 queuedata.json
[2025-11-22 20:56:49] -rwx------ 1 boincer umatlas     36292 Nov 21 06:46 runpilot2-wrapper.sh
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas       100 Nov 22 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 20:56:49] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 13:48 run_atlas
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas       105 Nov 22 13:48 job.xml
[2025-11-22 20:56:49] -rw-r--r-- 2 boincer umatlas 411021507 Nov 22 13:48 EVNT.47493127._002423.pool.root.1
[2025-11-22 20:56:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 13:48 start_atlas.sh
[2025-11-22 20:56:49] drwxrwx--x 2 boincer umatlas      4096 Nov 22 13:48 shared
[2025-11-22 20:56:49] -rw-r--r-- 2 boincer umatlas    590107 Nov 22 13:48 input.tar.gz
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas         0 Nov 22 13:48 boinc_lockfile
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 13:48 pandaJob.out
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas    989784 Nov 22 13:48 agis_schedconf.cvmfs.json
[2025-11-22 20:56:49] drwx------ 5 boincer umatlas      4096 Nov 22 13:49 pilot3
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas       533 Nov 22 20:41 boinc_task_state.xml
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas      5870 Nov 22 20:55 init_data.xml
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas 934748295 Nov 22 20:55 HITS.47533967._003948.pool.root.1
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas      1061 Nov 22 20:55 memory_monitor_summary.json
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas   1526164 Nov 22 20:56 agis_ddmendpoints.agis.ALL.json
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas   2170755 Nov 22 20:56 log.47533967._003948.job.log.tgz.1
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas      8667 Nov 22 20:56 heartbeat.json
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 20:56 boinc_mmap_file
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas        29 Nov 22 20:56 wrapper_checkpoint.txt
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas        95 Nov 22 20:56 pilot_heartbeat.json
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas      4818 Nov 22 20:56 pilotlog.txt
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas   3581952 Nov 22 20:56 log.47533967._003948.job.log.1
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas       353 Nov 22 20:56 output.list
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas       620 Nov 22 20:56 runtime_log
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas   5775360 Nov 22 20:56 result.tar.gz
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas       669 Nov 22 20:56 v0yLDmvleg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnNJKDmBEEqLn.diag
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas      8820 Nov 22 20:56 runtime_log.err
[2025-11-22 20:56:49] -rw-r--r-- 1 boincer umatlas     21100 Nov 22 20:56 stderr.txt
[2025-11-22 20:56:49] HITS file was successfully produced:
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas 934748295 Nov 22 20:55 shared/HITS.pool.root.1
[2025-11-22 20:56:49]  *** Contents of shared directory: ***
[2025-11-22 20:56:49] total 1320480
[2025-11-22 20:56:49] -rw-r--r-- 2 boincer umatlas 411021507 Nov 22 13:48 ATLAS.root_0
[2025-11-22 20:56:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 13:48 start_atlas.sh
[2025-11-22 20:56:49] -rw-r--r-- 2 boincer umatlas    590107 Nov 22 13:48 input.tar.gz
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas 934748295 Nov 22 20:55 HITS.pool.root.1
[2025-11-22 20:56:49] -rw------- 1 boincer umatlas   5775360 Nov 22 20:56 result.tar.gz
20:56:51 (14803): run_atlas exited; CPU time 288752.198478
20:56:51 (14803): called boinc_finish(0)

</stderr_txt>
]]>

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