Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:34:10 (12467): wrapper (7.7.26015): starting
13:34:10 (12467): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 13:34:10] Arguments: --nthreads 12
[2025-11-22 13:34:10] Threads: 12
[2025-11-22 13:34:10] Checking for CVMFS
[2025-11-22 13:34:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 13:34:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 13:34:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 13:34:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 13:34:10] 2.11.2.0 3009 67554 96336 153181 3 81 10497823 20275201 1 130560 0 27581237 99.908 3618282 34172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 13:34:10] CVMFS is ok
[2025-11-22 13:34:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 13:34:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 13:34:10] Further information can be found at the LHC@home message board.
[2025-11-22 13:34:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 13:34:10] Checking for apptainer binary...
[2025-11-22 13:34:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 13:34:10] Running /usr/bin/apptainer --version
[2025-11-22 13:34:10] apptainer version 1.3.2-1.el7
[2025-11-22 13:34:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 13:34:12] c-115-42.aglt2.org
[2025-11-22 13:34:12] apptainer works
[2025-11-22 13:34:12] Set ATHENA_PROC_NUMBER=12
[2025-11-22 13:34:12] Set ATHENA_CORE_NUMBER=12
[2025-11-22 13:34:12] Starting ATLAS job with PandaID=6895330392
[2025-11-22 13:34:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 20:02:10]  *** The last 200 lines of the pilot log: ***
[2025-11-22 20:02:10] 2025-11-23 01:01:22,389 | INFO     | time since job start (23216s) is within the limit (172800.0s)
[2025-11-22 20:02:10] 2025-11-23 01:01:23,354 | INFO     | monitor loop #1742: job 0:6895330392 is in state 'finished'
[2025-11-22 20:02:10] 2025-11-23 01:01:23,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 20:02:10] 2025-11-23 01:01:23,939 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 20:02:10] 2025-11-23 01:01:23,946 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-22 20:02:10] 2025-11-23 01:01:23,948 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895330392/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 20:02:10] 2025-11-23 01:01:23,948 | INFO     | extracted standard info from prmon json
[2025-11-22 20:02:10] 2025-11-23 01:01:23,949 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 20:02:10] 2025-11-23 01:01:23,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 20:02:10] 2025-11-23 01:01:23,955 | INFO     | fitting pss+swap vs Time
[2025-11-22 20:02:10] 2025-11-23 01:01:23,955 | INFO     | sum of square deviations: 17014857664.555336
[2025-11-22 20:02:10] 2025-11-23 01:01:23,958 | INFO     | sum of deviations: 255577779250.87408
[2025-11-22 20:02:10] 2025-11-23 01:01:23,958 | INFO     | mean x: 1763848055.6657894
[2025-11-22 20:02:10] 2025-11-23 01:01:23,958 | INFO     | mean y: 4119230.6210526316
[2025-11-22 20:02:10] 2025-11-23 01:01:23,958 | INFO     | intersect: -26490393852.61935
[2025-11-22 20:02:10] 2025-11-23 01:01:23,959 | INFO     | chi2: 5.8757237517267775
[2025-11-22 20:02:10] 2025-11-23 01:01:23,959 | INFO     | sum of square deviations: 16352036544.41603
[2025-11-22 20:02:10] 2025-11-23 01:01:23,962 | INFO     | sum of deviations: 425589643513.6481
[2025-11-22 20:02:10] 2025-11-23 01:01:23,962 | INFO     | mean x: 1763847903.168
[2025-11-22 20:02:10] 2025-11-23 01:01:23,962 | INFO     | mean y: 4158308.370666667
[2025-11-22 20:02:10] 2025-11-23 01:01:23,962 | INFO     | intersect: -45902992050.70243
[2025-11-22 20:02:10] 2025-11-23 01:01:23,963 | INFO     | chi2: 3.068557517310363
[2025-11-22 20:02:10] 2025-11-23 01:01:23,963 | INFO     | current chi2=3.068557517310363 (change=47.77566735657773 %)
[2025-11-22 20:02:10] 2025-11-23 01:01:23,963 | INFO     | sum of square deviations: 15706657611.773043
[2025-11-22 20:02:10] 2025-11-23 01:01:23,966 | INFO     | sum of deviations: 487778106273.27594
[2025-11-22 20:02:10] 2025-11-23 01:01:23,966 | INFO     | mean x: 1763847750.6702702
[2025-11-22 20:02:10] 2025-11-23 01:01:23,966 | INFO     | mean y: 4172926.0432432434
[2025-11-22 20:02:10] 2025-11-23 01:01:23,967 | INFO     | intersect: -54773000985.9562
[2025-11-22 20:02:10] 2025-11-23 01:01:23,967 | INFO     | chi2: 2.4482440022672836
[2025-11-22 20:02:10] 2025-11-23 01:01:23,967 | INFO     | current chi2=2.4482440022672836 (change=20.215150328575028 %)
[2025-11-22 20:02:10] 2025-11-23 01:01:23,967 | INFO     | right removable region: 369
[2025-11-22 20:02:10] 2025-11-23 01:01:23,968 | INFO     | sum of square deviations: 16351998114.416035
[2025-11-22 20:02:10] 2025-11-23 01:01:23,970 | INFO     | sum of deviations: 111993206054.27219
[2025-11-22 20:02:10] 2025-11-23 01:01:23,971 | INFO     | mean x: 1763848208.168
[2025-11-22 20:02:10] 2025-11-23 01:01:23,971 | INFO     | mean y: 4152132.1226666667
[2025-11-22 20:02:10] 2025-11-23 01:01:23,971 | INFO     | intersect: -12076268526.173878
[2025-11-22 20:02:10] 2025-11-23 01:01:23,971 | INFO     | chi2: 3.5614122869537055
[2025-11-22 20:02:10] 2025-11-23 01:01:23,971 | INFO     | current chi2=3.5614122869537055 (change=39.38768333165654 %)
[2025-11-22 20:02:10] 2025-11-23 01:01:23,972 | INFO     | sum of square deviations: 15706580751.773037
[2025-11-22 20:02:10] 2025-11-23 01:01:23,975 | INFO     | sum of deviations: 79880994581.29745
[2025-11-22 20:02:10] 2025-11-23 01:01:23,975 | INFO     | mean x: 1763848360.6702702
[2025-11-22 20:02:10] 2025-11-23 01:01:23,975 | INFO     | mean y: 4159707.527027027
[2025-11-22 20:02:10] 2025-11-23 01:01:23,975 | INFO     | intersect: -8966472638.728664
[2025-11-22 20:02:10] 2025-11-23 01:01:23,975 | INFO     | chi2: 3.503250741093636
[2025-11-22 20:02:10] 2025-11-23 01:01:23,975 | INFO     | current chi2=3.503250741093636 (change=1.633103420042907 %)
[2025-11-22 20:02:10] 2025-11-23 01:01:23,975 | INFO     | left removable region: 20
[2025-11-22 20:02:10] 2025-11-23 01:01:23,976 | INFO     | sum of square deviations: 13181132591.627533
[2025-11-22 20:02:10] 2025-11-23 01:01:23,978 | INFO     | sum of deviations: 276646735455.46716
[2025-11-22 20:02:10] 2025-11-23 01:01:23,979 | INFO     | mean x: 1763848330.1805158
[2025-11-22 20:02:10] 2025-11-23 01:01:23,979 | INFO     | mean y: 4223855.627507163
[2025-11-22 20:02:10] 2025-11-23 01:01:23,979 | INFO     | intersect: -37015575390.83206
[2025-11-22 20:02:10] 2025-11-23 01:01:23,979 | INFO     | chi2: 0.023331811955102925
[2025-11-22 20:02:10] 2025-11-23 01:01:23,979 | INFO     | current memory leak: 20.99 B/s (using 349 data points, chi2=0.02)
[2025-11-22 20:02:10] 2025-11-23 01:01:23,980 | INFO     | could have reported an average CPU frequency of 2599 MHz (16 samples)
[2025-11-22 20:02:10] 2025-11-23 01:01:23,980 | INFO     | ..............................
[2025-11-22 20:02:10] 2025-11-23 01:01:23,980 | INFO     | . Timing measurements:
[2025-11-22 20:02:10] 2025-11-23 01:01:23,980 | INFO     | . get job = 0 s
[2025-11-22 20:02:10] 2025-11-23 01:01:23,980 | INFO     | . initial setup = 2 s
[2025-11-22 20:02:10] 2025-11-23 01:01:23,980 | INFO     | . payload setup = 7 s
[2025-11-22 20:02:10] 2025-11-23 01:01:23,980 | INFO     | . stage-in = 0 s
[2025-11-22 20:02:10] 2025-11-23 01:01:23,980 | INFO     | . payload execution = 23175 s
[2025-11-22 20:02:10] 2025-11-23 01:01:23,981 | INFO     | . stage-out = 2 s
[2025-11-22 20:02:10] 2025-11-23 01:01:23,981 | INFO     | . log creation = 0 s
[2025-11-22 20:02:10] 2025-11-23 01:01:23,981 | INFO     | ..............................
[2025-11-22 20:02:10] 2025-11-23 01:01:24,151 | INFO     | 
[2025-11-22 20:02:10] 2025-11-23 01:01:24,152 | INFO     | job summary report
[2025-11-22 20:02:10] 2025-11-23 01:01:24,152 | INFO     | --------------------------------------------------
[2025-11-22 20:02:10] 2025-11-23 01:01:24,152 | INFO     | PanDA job id: 6895330392
[2025-11-22 20:02:10] 2025-11-23 01:01:24,152 | INFO     | task id: 47556137
[2025-11-22 20:02:10] 2025-11-23 01:01:24,152 | INFO     | errors: (none)
[2025-11-22 20:02:10] 2025-11-23 01:01:24,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 20:02:10] 2025-11-23 01:01:24,153 | INFO     | pilot state: finished 
[2025-11-22 20:02:10] 2025-11-23 01:01:24,153 | INFO     | transexitcode: 0
[2025-11-22 20:02:10] 2025-11-23 01:01:24,153 | INFO     | exeerrorcode: 0
[2025-11-22 20:02:10] 2025-11-23 01:01:24,153 | INFO     | exeerrordiag: 
[2025-11-22 20:02:10] 2025-11-23 01:01:24,153 | INFO     | exitcode: 0
[2025-11-22 20:02:10] 2025-11-23 01:01:24,153 | INFO     | exitmsg: OK
[2025-11-22 20:02:10] 2025-11-23 01:01:24,154 | INFO     | cpuconsumptiontime: 266057 s
[2025-11-22 20:02:10] 2025-11-23 01:01:24,154 | INFO     | nevents: 1000
[2025-11-22 20:02:10] 2025-11-23 01:01:24,154 | INFO     | neventsw: 0
[2025-11-22 20:02:10] 2025-11-23 01:01:24,154 | INFO     | pid: 22600
[2025-11-22 20:02:10] 2025-11-23 01:01:24,154 | INFO     | pgrp: 22600
[2025-11-22 20:02:10] 2025-11-23 01:01:24,154 | INFO     | corecount: 12
[2025-11-22 20:02:10] 2025-11-23 01:01:24,155 | INFO     | event service: False
[2025-11-22 20:02:10] 2025-11-23 01:01:24,155 | INFO     | sizes: {0: 2298585, 1: 2298784, 5: 2299046, 11: 2299102, 23186: 2334979, 23190: 2343973, 23194: 2344157, 23201: 2344403}
[2025-11-22 20:02:10] 2025-11-23 01:01:24,155 | INFO     | --------------------------------------------------
[2025-11-22 20:02:10] 2025-11-23 01:01:24,155 | INFO     | 
[2025-11-22 20:02:10] 2025-11-23 01:01:24,155 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 20:02:10] 2025-11-23 01:01:24,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,181 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,181 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,181 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 20:02:10] 2025-11-23 01:01:24,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,184 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 20:02:10] 2025-11-23 01:01:24,184 | INFO     | job 6895330392 has completed (purged errors)
[2025-11-22 20:02:10] 2025-11-23 01:01:24,184 | INFO     | overall cleanup function is called
[2025-11-22 20:02:10] 2025-11-23 01:01:25,199 | INFO     | --- collectZombieJob: --- 10, [22600]
[2025-11-22 20:02:10] 2025-11-23 01:01:25,199 | INFO     | zombie collector waiting for pid 22600
[2025-11-22 20:02:10] 2025-11-23 01:01:25,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 20:02:10] 2025-11-23 01:01:25,200 | INFO     | collected zombie processes
[2025-11-22 20:02:10] 2025-11-23 01:01:25,200 | INFO     | will attempt to kill all subprocesses of pid=22600
[2025-11-22 20:02:10] 2025-11-23 01:01:25,289 | INFO     | process IDs to be killed: [22600] (in reverse order)
[2025-11-22 20:02:10] 2025-11-23 01:01:25,343 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 20:02:10] 2025-11-23 01:01:25,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 20:02:10] 2025-11-23 01:01:25,346 | INFO     | did not find any defunct processes belonging to 22600
[2025-11-22 20:02:10] 2025-11-23 01:01:25,349 | INFO     | did not find any defunct processes belonging to 22600
[2025-11-22 20:02:10] 2025-11-23 01:01:25,351 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 20:02:10] 2025-11-23 01:01:25,351 | INFO     | ready for new job
[2025-11-22 20:02:10] 2025-11-23 01:01:25,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 20:02:10] 2025-11-23 01:01:25,353 | INFO     | ***************************************
[2025-11-22 20:02:10] 2025-11-23 01:01:25,353 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 20:02:10] 2025-11-23 01:01:25,353 | INFO     | ***************************************
[2025-11-22 20:02:10] 2025-11-23 01:01:25,354 | INFO     | 
[2025-11-22 20:02:10] 2025-11-23 01:01:25,354 | INFO     | architecture information:
[2025-11-22 20:02:10] 2025-11-23 01:01:25,355 | INFO     | executing command: cat /etc/os-release
[2025-11-22 20:02:10] 2025-11-23 01:01:25,371 | INFO     | cat /etc/os-release:
[2025-11-22 20:02:10] NAME="CentOS Linux"
[2025-11-22 20:02:10] VERSION="7 (Core)"
[2025-11-22 20:02:10] ID="centos"
[2025-11-22 20:02:10] ID_LIKE="rhel fedora"
[2025-11-22 20:02:10] VERSION_ID="7"
[2025-11-22 20:02:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 20:02:10] ANSI_COLOR="0;31"
[2025-11-22 20:02:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 20:02:10] HOME_URL="https://www.centos.org/"
[2025-11-22 20:02:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 20:02:10] 
[2025-11-22 20:02:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 20:02:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 20:02:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 20:02:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 20:02:10] 
[2025-11-22 20:02:10] 2025-11-23 01:01:25,371 | INFO     | ***************************************
[2025-11-22 20:02:10] 2025-11-23 01:01:25,874 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 20:02:10] 2025-11-23 01:01:25,891 | INFO     | sufficient remaining disk space (17471373312 B)
[2025-11-22 20:02:10] 2025-11-23 01:01:25,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 20:02:10] 2025-11-23 01:01:25,892 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 20:02:10] 2025-11-23 01:01:25,892 | INFO     | update_server=False
[2025-11-22 20:02:10] 2025-11-23 01:01:25,892 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 20:02:10] 2025-11-23 01:01:25,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:02:10] 2025-11-23 01:01:25,956 | INFO     | all data control threads have been joined
[2025-11-22 20:02:10] 2025-11-23 01:01:25,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 20:02:10] 2025-11-23 01:01:26,302 | INFO     | all payload control threads have been joined
[2025-11-22 20:02:10] 2025-11-23 01:01:26,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:02:10] 2025-11-23 01:01:26,864 | INFO     | aborting loop
[2025-11-22 20:02:10] 2025-11-23 01:01:26,897 | INFO     | [job] queue monitor thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:26,898 | INFO     | [job] retrieve thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:26,962 | INFO     | [data] control thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:27,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 20:02:10] 2025-11-23 01:01:27,028 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:27,045 | INFO     | [job] validate thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:27,123 | INFO     | [payload] failed_post thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:27,242 | INFO     | all job control threads have been joined
[2025-11-22 20:02:10] 2025-11-23 01:01:27,308 | INFO     | [payload] control thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:27,501 | INFO     | [payload] validate_post thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:27,587 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:27,600 | INFO     | [data] copytool_in thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:27,628 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:27,868 | INFO     | [job] job monitor thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:27,971 | INFO     | [data] copytool_out thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:28,248 | INFO     | [job] control thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:31,006 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:36,666 | INFO     | job.realtimelogging is not enabled
[2025-11-22 20:02:10] 2025-11-23 01:01:37,671 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 20:02:10] 2025-11-23 01:01:55,587 | INFO     | PID=16227 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 20:02:10] 2025-11-23 01:01:55,587 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 20:02:10] 2025-11-23 01:01:55,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 20:02:10] 2025-11-23 01:01:55,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 20:02:10] 2025-11-23 01:02:04,440 | INFO     | [monitor] cgroup control has ended
[2025-11-22 20:02:10] 2025-11-23 01:02:05,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140206347863872)>', '<ExcThread(monitor, started 140205734467328)>']
[2025-11-22 20:02:10] 2025-11-23 01:02:05,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 20:02:10] 2025-11-23 01:02:05,639 | INFO     | [monitor] control thread has ended
[2025-11-22 20:02:10] 2025-11-23 01:02:10,220 | INFO     | all workflow threads have been joined
[2025-11-22 20:02:10] 2025-11-23 01:02:10,220 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 20:02:10] 2025-11-23 01:02:10,225 | INFO     | traces error code: 0
[2025-11-22 20:02:10] 2025-11-23 01:02:10,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 20:02:10] 2025-11-23 01:02:10,321 [wrapper] ==== pilot stdout END ====
[2025-11-22 20:02:10] 2025-11-23 01:02:10,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 20:02:10] 2025-11-23 01:02:10,329 [wrapper] pilotpid: 16227
[2025-11-22 20:02:10] 2025-11-23 01:02:10,332 [wrapper] Pilot exit status: 0
[2025-11-22 20:02:10] 2025-11-23 01:02:10,346 [wrapper] pandaids: 6895330392
[2025-11-22 20:02:10] 2025-11-23 01:02:10,391 [wrapper] cleanup supervisor_pilot 22032 16228
[2025-11-22 20:02:10] 2025-11-23 01:02:10,395 [wrapper] Test setup, not cleaning
[2025-11-22 20:02:10] 2025-11-23 01:02:10,398 [wrapper] apfmon messages muted
[2025-11-22 20:02:10] 2025-11-23 01:02:10,402 [wrapper] ==== wrapper stdout END ====
[2025-11-22 20:02:10] 2025-11-23 01:02:10,406 [wrapper] ==== wrapper stderr END ====
[2025-11-22 20:02:10]  *** Error codes and diagnostics ***
[2025-11-22 20:02:10]     "exeErrorCode": 0,
[2025-11-22 20:02:10]     "exeErrorDiag": "",
[2025-11-22 20:02:10]     "pilotErrorCode": 0,
[2025-11-22 20:02:10]     "pilotErrorDiag": "",
[2025-11-22 20:02:10]  *** Listing of results directory ***
[2025-11-22 20:02:10] total 1313600
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 15:30 pilot3.tar.gz
[2025-11-22 20:02:10] -rwx------ 1 boincer umatlas     36292 Nov 21 15:36 runpilot2-wrapper.sh
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 15:37 queuedata.json
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas       100 Nov 22 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 20:02:10] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 13:34 run_atlas
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas       105 Nov 22 13:34 job.xml
[2025-11-22 20:02:10] -rw-r--r-- 2 boincer umatlas 409923037 Nov 22 13:34 EVNT.47483658._000135.pool.root.1
[2025-11-22 20:02:10] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 13:34 input.tar.gz
[2025-11-22 20:02:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 13:34 start_atlas.sh
[2025-11-22 20:02:10] drwxrwx--x 2 boincer umatlas      4096 Nov 22 13:34 shared
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas         0 Nov 22 13:34 boinc_lockfile
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 13:34 pandaJob.out
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas        57 Nov 22 13:34 setup.sh.local
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas    989784 Nov 22 13:34 agis_schedconf.cvmfs.json
[2025-11-22 20:02:10] drwx------ 5 boincer umatlas      4096 Nov 22 13:34 pilot3
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas       532 Nov 22 19:50 boinc_task_state.xml
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas 920481107 Nov 22 20:00 HITS.47556137._001343.pool.root.1
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas        95 Nov 22 20:01 pilot_heartbeat.json
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas      1065 Nov 22 20:01 memory_monitor_summary.json
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas   1526164 Nov 22 20:01 agis_ddmendpoints.agis.ALL.json
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas   2146425 Nov 22 20:01 log.47556137._001343.job.log.tgz.1
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas      8678 Nov 22 20:01 heartbeat.json
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas      5955 Nov 22 20:01 init_data.xml
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 20:01 boinc_mmap_file
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas        29 Nov 22 20:01 wrapper_checkpoint.txt
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas      4818 Nov 22 20:02 pilotlog.txt
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas   3251789 Nov 22 20:02 log.47556137._001343.job.log.1
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas       353 Nov 22 20:02 output.list
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas       620 Nov 22 20:02 runtime_log
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas   5416960 Nov 22 20:02 result.tar.gz
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 20:02 runtime_log.err
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas       669 Nov 22 20:02 eKFODmS3mg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxhJKDmO75YAo.diag
[2025-11-22 20:02:10] -rw-r--r-- 1 boincer umatlas     21302 Nov 22 20:02 stderr.txt
[2025-11-22 20:02:10] HITS file was successfully produced:
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas 920481107 Nov 22 20:00 shared/HITS.pool.root.1
[2025-11-22 20:02:10]  *** Contents of shared directory: ***
[2025-11-22 20:02:10] total 1305120
[2025-11-22 20:02:10] -rw-r--r-- 2 boincer umatlas 409923037 Nov 22 13:34 ATLAS.root_0
[2025-11-22 20:02:10] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 13:34 input.tar.gz
[2025-11-22 20:02:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 13:34 start_atlas.sh
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas 920481107 Nov 22 20:00 HITS.pool.root.1
[2025-11-22 20:02:10] -rw------- 1 boincer umatlas   5416960 Nov 22 20:02 result.tar.gz
20:02:12 (12467): run_atlas exited; CPU time 261949.965801
20:02:12 (12467): called boinc_finish(0)

</stderr_txt>
]]>

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