Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:45:33 (3928709): wrapper (7.7.26015): starting
05:45:33 (3928709): wrapper: running run_atlas (--nthreads 3)
[2025-11-28 05:45:33] Arguments: --nthreads 3
[2025-11-28 05:45:33] Threads: 3
[2025-11-28 05:45:33] Checking for CVMFS
[2025-11-28 05:45:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 05:45:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 05:45:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 05:45:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 05:45:34] 2.9.2.0 1906071 13751 90704 153397 3 81 11217786 36864000 0 130560 1 5102674 99.943 676622 830 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-28 05:45:34] CVMFS is ok
[2025-11-28 05:45:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 05:45:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 05:45:34] Further information can be found at the LHC@home message board.
[2025-11-28 05:45:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 05:45:34] Checking for apptainer binary...
[2025-11-28 05:45:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 05:45:34] Running /usr/bin/apptainer --version
[2025-11-28 05:45:34] apptainer version 1.4.1-1.1
[2025-11-28 05:45:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 05:45:34] thA352a
[2025-11-28 05:45:34] apptainer works
[2025-11-28 05:45:34] Set ATHENA_PROC_NUMBER=3
[2025-11-28 05:45:34] Set ATHENA_CORE_NUMBER=3
[2025-11-28 05:45:34] Starting ATLAS job with PandaID=6894289745
[2025-11-28 05:45:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 14:00:23]  *** The last 200 lines of the pilot log: ***
[2025-11-28 14:00:23] 2025-11-28 12:59:23,214 | INFO     | monitor loop #2253: job 0:6894289745 is in state 'finished'
[2025-11-28 14:00:23] 2025-11-28 12:59:23,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 14:00:23] 2025-11-28 12:59:23,963 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 14:00:23] 2025-11-28 12:59:23,965 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3806.602166666667
[2025-11-28 14:00:23] 2025-11-28 12:59:23,966 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894289745/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 14:00:23] 2025-11-28 12:59:23,966 | INFO     | extracted standard info from prmon json
[2025-11-28 14:00:23] 2025-11-28 12:59:23,966 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 14:00:23] 2025-11-28 12:59:23,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 14:00:23] 2025-11-28 12:59:23,969 | INFO     | fitting pss+swap vs Time
[2025-11-28 14:00:23] 2025-11-28 12:59:23,969 | INFO     | sum of square deviations: 35594704597.5
[2025-11-28 14:00:23] 2025-11-28 12:59:23,971 | INFO     | sum of deviations: 176306520538.50003
[2025-11-28 14:00:23] 2025-11-28 12:59:23,971 | INFO     | mean x: 1764319951.5
[2025-11-28 14:00:23] 2025-11-28 12:59:23,971 | INFO     | mean y: 2147352.829218107
[2025-11-28 14:00:23] 2025-11-28 12:59:23,971 | INFO     | intersect: -8736824224.068419
[2025-11-28 14:00:23] 2025-11-28 12:59:23,971 | INFO     | chi2: 3.946122280620801
[2025-11-28 14:00:23] 2025-11-28 12:59:23,972 | INFO     | sum of square deviations: 34507363280.0
[2025-11-28 14:00:23] 2025-11-28 12:59:23,973 | INFO     | sum of deviations: 256156319608.0
[2025-11-28 14:00:23] 2025-11-28 12:59:23,973 | INFO     | mean x: 1764319799.0
[2025-11-28 14:00:23] 2025-11-28 12:59:23,973 | INFO     | mean y: 2158516.0644490644
[2025-11-28 14:00:23] 2025-11-28 12:59:23,973 | INFO     | intersect: -13094804664.118767
[2025-11-28 14:00:23] 2025-11-28 12:59:23,974 | INFO     | chi2: 2.1680851780455748
[2025-11-28 14:00:23] 2025-11-28 12:59:23,974 | INFO     | current chi2=2.1680851780455748 (change=45.05783085605515 %)
[2025-11-28 14:00:23] 2025-11-28 12:59:23,974 | INFO     | sum of square deviations: 33442394475.0
[2025-11-28 14:00:23] 2025-11-28 12:59:23,976 | INFO     | sum of deviations: 251034263708.5
[2025-11-28 14:00:23] 2025-11-28 12:59:23,976 | INFO     | mean x: 1764319646.5
[2025-11-28 14:00:23] 2025-11-28 12:59:23,976 | INFO     | mean y: 2157782.5105042015
[2025-11-28 14:00:23] 2025-11-28 12:59:23,976 | INFO     | intersect: -13241651171.918991
[2025-11-28 14:00:23] 2025-11-28 12:59:23,976 | INFO     | chi2: 2.1679346109177793
[2025-11-28 14:00:23] 2025-11-28 12:59:23,976 | INFO     | current chi2=2.1679346109177793 (change=0.006944705370441941 %)
[2025-11-28 14:00:23] 2025-11-28 12:59:23,976 | INFO     | right removable region: 475
[2025-11-28 14:00:23] 2025-11-28 12:59:23,976 | INFO     | sum of square deviations: 34507363280.0
[2025-11-28 14:00:23] 2025-11-28 12:59:23,978 | INFO     | sum of deviations: 80023324213.99988
[2025-11-28 14:00:23] 2025-11-28 12:59:23,978 | INFO     | mean x: 1764320104.0
[2025-11-28 14:00:23] 2025-11-28 12:59:23,978 | INFO     | mean y: 2160835.9334719335
[2025-11-28 14:00:23] 2025-11-28 12:59:23,978 | INFO     | intersect: -4089335768.836094
[2025-11-28 14:00:23] 2025-11-28 12:59:23,978 | INFO     | chi2: 1.9564469534410764
[2025-11-28 14:00:23] 2025-11-28 12:59:23,978 | INFO     | current chi2=1.9564469534410764 (change=50.42102564715025 %)
[2025-11-28 14:00:23] 2025-11-28 12:59:23,979 | INFO     | sum of square deviations: 33442394475.0
[2025-11-28 14:00:23] 2025-11-28 12:59:23,980 | INFO     | sum of deviations: 60258269950.999985
[2025-11-28 14:00:23] 2025-11-28 12:59:23,980 | INFO     | mean x: 1764320256.5
[2025-11-28 14:00:23] 2025-11-28 12:59:23,980 | INFO     | mean y: 2163652.4537815126
[2025-11-28 14:00:23] 2025-11-28 12:59:23,980 | INFO     | intersect: -3176881627.20377
[2025-11-28 14:00:23] 2025-11-28 12:59:23,981 | INFO     | chi2: 1.8137853340190473
[2025-11-28 14:00:23] 2025-11-28 12:59:23,981 | INFO     | current chi2=1.8137853340190473 (change=7.291872604626986 %)
[2025-11-28 14:00:23] 2025-11-28 12:59:23,981 | INFO     | left removable region: 20
[2025-11-28 14:00:23] 2025-11-28 12:59:23,981 | INFO     | sum of square deviations: 29208584860.0
[2025-11-28 14:00:23] 2025-11-28 12:59:23,983 | INFO     | sum of deviations: 126929476917.00002
[2025-11-28 14:00:23] 2025-11-28 12:59:23,983 | INFO     | mean x: 1764320226.0
[2025-11-28 14:00:23] 2025-11-28 12:59:23,983 | INFO     | mean y: 2175813.0065934067
[2025-11-28 14:00:23] 2025-11-28 12:59:23,983 | INFO     | intersect: -7664893456.992378
[2025-11-28 14:00:23] 2025-11-28 12:59:23,983 | INFO     | chi2: 0.017548108683680248
[2025-11-28 14:00:23] 2025-11-28 12:59:23,983 | INFO     | current memory leak: 4.35 B/s (using 455 data points, chi2=0.02)
[2025-11-28 14:00:23] 2025-11-28 12:59:23,983 | INFO     | could have reported an average CPU frequency of 4106 MHz (20 samples)
[2025-11-28 14:00:23] 2025-11-28 12:59:23,983 | INFO     | ..............................
[2025-11-28 14:00:23] 2025-11-28 12:59:23,983 | INFO     | . Timing measurements:
[2025-11-28 14:00:23] 2025-11-28 12:59:23,983 | INFO     | . get job = 0 s
[2025-11-28 14:00:23] 2025-11-28 12:59:23,983 | INFO     | . initial setup = 1 s
[2025-11-28 14:00:23] 2025-11-28 12:59:23,984 | INFO     | . payload setup = 2 s
[2025-11-28 14:00:23] 2025-11-28 12:59:23,984 | INFO     | . stage-in = 0 s
[2025-11-28 14:00:23] 2025-11-28 12:59:23,984 | INFO     | . payload execution = 29599 s
[2025-11-28 14:00:23] 2025-11-28 12:59:23,984 | INFO     | . stage-out = 1 s
[2025-11-28 14:00:23] 2025-11-28 12:59:23,984 | INFO     | . log creation = 0 s
[2025-11-28 14:00:23] 2025-11-28 12:59:23,984 | INFO     | ..............................
[2025-11-28 14:00:23] 2025-11-28 12:59:24,177 | INFO     | PID=3932436 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 14:00:23] 2025-11-28 12:59:24,332 | INFO     | 
[2025-11-28 14:00:23] 2025-11-28 12:59:24,332 | INFO     | job summary report
[2025-11-28 14:00:23] 2025-11-28 12:59:24,332 | INFO     | --------------------------------------------------
[2025-11-28 14:00:23] 2025-11-28 12:59:24,332 | INFO     | PanDA job id: 6894289745
[2025-11-28 14:00:23] 2025-11-28 12:59:24,332 | INFO     | task id: 47533967
[2025-11-28 14:00:23] 2025-11-28 12:59:24,332 | INFO     | errors: (none)
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | pilot state: finished 
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | transexitcode: 0
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | exeerrorcode: 0
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | exeerrordiag: 
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | exitcode: 0
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | exitmsg: OK
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | cpuconsumptiontime: 87365 s
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | nevents: 1000
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | neventsw: 0
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | pid: 3938877
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | pgrp: 3938877
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | corecount: 3
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | event service: False
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | sizes: {0: 2284216, 2: 2284478, 10: 2284506, 29605: 2323692, 29607: 2332692, 29608: 2332748, 29611: 2333122}
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | --------------------------------------------------
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | 
[2025-11-28 14:00:23] 2025-11-28 12:59:24,333 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-28 14:00:23] 2025-11-28 12:59:24,346 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 14:00:23] 2025-11-28 12:59:24,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 14:00:23] 2025-11-28 12:59:24,347 | INFO     | job 6894289745 has completed (purged errors)
[2025-11-28 14:00:23] 2025-11-28 12:59:24,347 | INFO     | overall cleanup function is called
[2025-11-28 14:00:23] 2025-11-28 12:59:25,355 | INFO     | --- collectZombieJob: --- 10, [3938877]
[2025-11-28 14:00:23] 2025-11-28 12:59:25,355 | INFO     | zombie collector waiting for pid 3938877
[2025-11-28 14:00:23] 2025-11-28 12:59:25,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 14:00:23] 2025-11-28 12:59:25,355 | INFO     | collected zombie processes
[2025-11-28 14:00:23] 2025-11-28 12:59:25,355 | INFO     | will attempt to kill all subprocesses of pid=3938877
[2025-11-28 14:00:23] 2025-11-28 12:59:25,407 | INFO     | process IDs to be killed: [3938877] (in reverse order)
[2025-11-28 14:00:23] 2025-11-28 12:59:25,434 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 14:00:23] 2025-11-28 12:59:25,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 14:00:23] 2025-11-28 12:59:25,436 | INFO     | did not find any defunct processes belonging to 3938877
[2025-11-28 14:00:23] 2025-11-28 12:59:25,437 | INFO     | did not find any defunct processes belonging to 3938877
[2025-11-28 14:00:23] 2025-11-28 12:59:25,438 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 14:00:23] 2025-11-28 12:59:25,438 | INFO     | ready for new job
[2025-11-28 14:00:23] 2025-11-28 12:59:25,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 14:00:23] 2025-11-28 12:59:25,439 | INFO     | ***************************************
[2025-11-28 14:00:23] 2025-11-28 12:59:25,439 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 14:00:23] 2025-11-28 12:59:25,439 | INFO     | ***************************************
[2025-11-28 14:00:23] 2025-11-28 12:59:25,439 | INFO     | 
[2025-11-28 14:00:23] 2025-11-28 12:59:25,440 | INFO     | architecture information:
[2025-11-28 14:00:23] 2025-11-28 12:59:25,440 | INFO     | executing command: cat /etc/os-release
[2025-11-28 14:00:23] 2025-11-28 12:59:25,449 | INFO     | cat /etc/os-release:
[2025-11-28 14:00:23] NAME="CentOS Linux"
[2025-11-28 14:00:23] VERSION="7 (Core)"
[2025-11-28 14:00:23] ID="centos"
[2025-11-28 14:00:23] ID_LIKE="rhel fedora"
[2025-11-28 14:00:23] VERSION_ID="7"
[2025-11-28 14:00:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 14:00:23] ANSI_COLOR="0;31"
[2025-11-28 14:00:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 14:00:23] HOME_URL="https://www.centos.org/"
[2025-11-28 14:00:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 14:00:23] 
[2025-11-28 14:00:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 14:00:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 14:00:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 14:00:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 14:00:23] 
[2025-11-28 14:00:23] 2025-11-28 12:59:25,449 | INFO     | ***************************************
[2025-11-28 14:00:23] 2025-11-28 12:59:25,952 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 14:00:23] 2025-11-28 12:59:25,962 | INFO     | sufficient remaining disk space (242733809664 B)
[2025-11-28 14:00:23] 2025-11-28 12:59:25,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 14:00:23] 2025-11-28 12:59:25,962 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 14:00:23] 2025-11-28 12:59:25,962 | INFO     | update_server=False
[2025-11-28 14:00:23] 2025-11-28 12:59:25,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 14:00:23] 2025-11-28 12:59:25,962 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:00:23] 2025-11-28 12:59:25,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 14:00:23] 2025-11-28 12:59:26,078 | INFO     | all data control threads have been joined
[2025-11-28 14:00:23] 2025-11-28 12:59:26,346 | INFO     | all payload control threads have been joined
[2025-11-28 14:00:23] 2025-11-28 12:59:26,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:00:23] 2025-11-28 12:59:26,722 | INFO     | aborting loop
[2025-11-28 14:00:23] 2025-11-28 12:59:26,809 | INFO     | all job control threads have been joined
[2025-11-28 14:00:23] 2025-11-28 12:59:26,967 | INFO     | [job] retrieve thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:26,968 | INFO     | [job] queue monitor thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:26,987 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:27,028 | INFO     | [payload] failed_post thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:27,083 | INFO     | [data] control thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:27,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 14:00:23] 2025-11-28 12:59:27,351 | INFO     | [payload] control thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:27,550 | INFO     | [payload] validate_post thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:27,726 | INFO     | [job] job monitor thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:27,814 | INFO     | [job] control thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:27,873 | INFO     | [data] copytool_in thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:27,968 | INFO     | [data] copytool_out thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:28,110 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:28,350 | INFO     | [job] validate thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:28,357 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:31,260 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:36,644 | INFO     | job.realtimelogging is not enabled
[2025-11-28 14:00:23] 2025-11-28 12:59:37,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 14:00:23] 2025-11-28 12:59:56,324 | INFO     | PID=3932436 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 14:00:23] 2025-11-28 12:59:56,324 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 14:00:23] 2025-11-28 12:59:56,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 14:00:23] 2025-11-28 12:59:56,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 14:00:23] 2025-11-28 13:00:17,578 | INFO     | [monitor] cgroup control has ended
[2025-11-28 14:00:23] 2025-11-28 13:00:18,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486861002560)>', '<ExcThread(monitor, started 140486199195392)>']
[2025-11-28 14:00:23] 2025-11-28 13:00:19,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 14:00:23] 2025-11-28 13:00:19,431 | INFO     | [monitor] control thread has ended
[2025-11-28 14:00:23] 2025-11-28 13:00:23,815 | INFO     | all workflow threads have been joined
[2025-11-28 14:00:23] 2025-11-28 13:00:23,815 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 14:00:23] 2025-11-28 13:00:23,815 | INFO     | traces error code: 0
[2025-11-28 14:00:23] 2025-11-28 13:00:23,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 14:00:23] 2025-11-28 13:00:23,864 [wrapper] ==== pilot stdout END ====
[2025-11-28 14:00:23] 2025-11-28 13:00:23,867 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 14:00:23] 2025-11-28 13:00:23,869 [wrapper] pilotpid: 3932436
[2025-11-28 14:00:23] 2025-11-28 13:00:23,871 [wrapper] Pilot exit status: 0
[2025-11-28 14:00:23] 2025-11-28 13:00:23,879 [wrapper] pandaids: 6894289745
[2025-11-28 14:00:23] 2025-11-28 13:00:23,898 [wrapper] cleanup supervisor_pilot 3995088 3932437
[2025-11-28 14:00:23] 2025-11-28 13:00:23,900 [wrapper] Test setup, not cleaning
[2025-11-28 14:00:23] 2025-11-28 13:00:23,902 [wrapper] apfmon messages muted
[2025-11-28 14:00:23] 2025-11-28 13:00:23,905 [wrapper] ==== wrapper stdout END ====
[2025-11-28 14:00:23] 2025-11-28 13:00:23,907 [wrapper] ==== wrapper stderr END ====
[2025-11-28 14:00:23]  *** Error codes and diagnostics ***
[2025-11-28 14:00:23]     "exeErrorCode": 0,
[2025-11-28 14:00:23]     "exeErrorDiag": "",
[2025-11-28 14:00:23]     "pilotErrorCode": 0,
[2025-11-28 14:00:23]     "pilotErrorDiag": "",
[2025-11-28 14:00:23]  *** Listing of results directory ***
[2025-11-28 14:00:23] total 1312216
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc    576529 Nov 21 12:32 pilot3.tar.gz
[2025-11-28 14:00:23] -rwx------ 1 boinc boinc     36292 Nov 21 12:34 runpilot2-wrapper.sh
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc      5112 Nov 21 12:34 queuedata.json
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc       100 Nov 28 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 14:00:23] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 05:45 run_atlas
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc       105 Nov 28 05:45 job.xml
[2025-11-28 14:00:23] -rw-r--r-- 2 boinc boinc 411196552 Nov 28 05:45 EVNT.47493127._002414.pool.root.1
[2025-11-28 14:00:23] -rw-r--r-- 2 boinc boinc    590099 Nov 28 05:45 input.tar.gz
[2025-11-28 14:00:23] -rw-r--r-- 2 boinc boinc     15847 Nov 28 05:45 start_atlas.sh
[2025-11-28 14:00:23] drwxrwx--x 2 boinc boinc      4096 Nov 28 05:45 shared
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc         0 Nov 28 05:45 boinc_setup_complete
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc      6442 Nov 28 05:45 init_data.xml
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc         0 Nov 28 05:45 boinc_lockfile
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc      2784 Nov 28 05:45 pandaJob.out
[2025-11-28 14:00:23] -rw------- 1 boinc boinc    991858 Nov 28 05:45 agis_schedconf.cvmfs.json
[2025-11-28 14:00:23] drwx------ 5 boinc boinc      4096 Nov 28 05:45 pilot3
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc       531 Nov 28 13:54 boinc_task_state.xml
[2025-11-28 14:00:23] -rw------- 1 boinc boinc 917904869 Nov 28 13:58 HITS.47533967._003857.pool.root.1
[2025-11-28 14:00:23] -rw------- 1 boinc boinc      1027 Nov 28 13:59 memory_monitor_summary.json
[2025-11-28 14:00:23] -rw------- 1 boinc boinc   1516240 Nov 28 13:59 agis_ddmendpoints.agis.ALL.json
[2025-11-28 14:00:23] -rw------- 1 boinc boinc   1176505 Nov 28 13:59 log.47533967._003857.job.log.tgz.1
[2025-11-28 14:00:23] -rw------- 1 boinc boinc      8569 Nov 28 13:59 heartbeat.json
[2025-11-28 14:00:23] -rw------- 1 boinc boinc        95 Nov 28 13:59 pilot_heartbeat.json
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc        28 Nov 28 14:00 wrapper_checkpoint.txt
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc      8192 Nov 28 14:00 boinc_mmap_file
[2025-11-28 14:00:23] -rw------- 1 boinc boinc      4824 Nov 28 14:00 pilotlog.txt
[2025-11-28 14:00:23] -rw------- 1 boinc boinc   4166310 Nov 28 14:00 log.47533967._003857.job.log.1
[2025-11-28 14:00:23] -rw------- 1 boinc boinc       353 Nov 28 14:00 output.list
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc       620 Nov 28 14:00 runtime_log
[2025-11-28 14:00:23] -rw------- 1 boinc boinc   5365760 Nov 28 14:00 result.tar.gz
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc      8903 Nov 28 14:00 runtime_log.err
[2025-11-28 14:00:23] -rw------- 1 boinc boinc       666 Nov 28 14:00 2d4NDmkaeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJMJKDmfRpctn.diag
[2025-11-28 14:00:23] -rw-r--r-- 1 boinc boinc     21343 Nov 28 14:00 stderr.txt
[2025-11-28 14:00:23] HITS file was successfully produced:
[2025-11-28 14:00:23] -rw------- 1 boinc boinc 917904869 Nov 28 13:58 shared/HITS.pool.root.1
[2025-11-28 14:00:23]  *** Contents of shared directory: ***
[2025-11-28 14:00:23] total 1303796
[2025-11-28 14:00:23] -rw-r--r-- 2 boinc boinc 411196552 Nov 28 05:45 ATLAS.root_0
[2025-11-28 14:00:23] -rw-r--r-- 2 boinc boinc    590099 Nov 28 05:45 input.tar.gz
[2025-11-28 14:00:23] -rw-r--r-- 2 boinc boinc     15847 Nov 28 05:45 start_atlas.sh
[2025-11-28 14:00:23] -rw------- 1 boinc boinc 917904869 Nov 28 13:58 HITS.pool.root.1
[2025-11-28 14:00:23] -rw------- 1 boinc boinc   5365760 Nov 28 14:00 result.tar.gz
14:00:25 (3928709): run_atlas exited; CPU time 87418.746107
14:00:25 (3928709): called boinc_finish(0)

</stderr_txt>
]]>

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