Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-24 04:01:40 (24544): vboxwrapper version 26210
2025-11-24 04:01:40 (24544): BOINC client version: 8.2.4
2025-11-24 04:01:41 (24544): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-11-24 04:01:41 (24544): Successfully copied 'init_data.xml' to the shared directory.
2025-11-24 04:01:42 (24544): Create VM. (boinc_00f265253398097e, slot#0)
2025-11-24 04:01:42 (24544): Setting Memory Size for VM. (4800MB)
2025-11-24 04:01:42 (24544): Setting CPU Count for VM. (8)
2025-11-24 04:01:43 (24544): Setting Chipset Options for VM.
2025-11-24 04:01:43 (24544): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-24 04:01:43 (24544): Setting Boot Options for VM.
2025-11-24 04:01:44 (24544): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-24 04:01:44 (24544): Enabling VM Network Access.
2025-11-24 04:01:44 (24544): Disabling USB Support for VM.
2025-11-24 04:01:44 (24544): Disabling COM Port Support for VM.
2025-11-24 04:01:45 (24544): Disabling LPT Port Support for VM.
2025-11-24 04:01:45 (24544): Disabling Audio Support for VM.
2025-11-24 04:01:45 (24544): Disabling Clipboard Support for VM.
2025-11-24 04:01:46 (24544): Disabling Drag and Drop Support for VM.
2025-11-24 04:01:46 (24544): Adding storage controller(s) to VM.
2025-11-24 04:01:46 (24544): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-24 04:01:47 (24544): Adding VirtualBox Guest Additions to VM.
2025-11-24 04:01:47 (24544): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-24 04:01:48 (24544): forwarding host port 61666 to guest port 80
2025-11-24 04:01:48 (24544): Enabling remote desktop for VM.
2025-11-24 04:01:48 (24544): Required extension pack not installed, remote desktop not enabled.
2025-11-24 04:01:48 (24544): Enabling shared directory for VM.
2025-11-24 04:01:49 (24544): Starting VM using VBoxManage interface. (boinc_00f265253398097e, slot#0)
2025-11-24 04:01:53 (24544): Successfully started VM. (PID = '24388')
2025-11-24 04:01:53 (24544): Reporting VM Process ID to BOINC.
2025-11-24 04:01:53 (24544): Guest Log: BIOS: VirtualBox 6.1.50
2025-11-24 04:01:53 (24544): Guest Log: CPUID EDX: 0x178bfbff
2025-11-24 04:01:53 (24544): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-24 04:01:53 (24544): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-24 04:01:53 (24544): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-24 04:01:53 (24544): Detected: Web Application Enabled (http://localhost:61666)
2025-11-24 04:01:53 (24544): Preference change detected
2025-11-24 04:01:53 (24544): Setting CPU throttle for VM. (95%)
2025-11-24 04:01:53 (24544): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-24 04:01:55 (24544): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-24 04:01:55 (24544): Guest Log: BIOS: Booting from Hard Disk...
2025-11-24 04:01:58 (24544): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-24 04:01:58 (24544): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-24 04:01:58 (24544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-24 04:02:05 (24544): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-24 04:02:05 (24544): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-24 04:02:11 (24544): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-24 04:02:11 (24544): Guest Log: 00:00:00.000128 main     Log opened 2025-11-24T04:02:10.011193000Z
2025-11-24 04:02:11 (24544): Guest Log: 00:00:00.000197 main     OS Product: Linux
2025-11-24 04:02:11 (24544): Guest Log: 00:00:00.000225 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-24 04:02:11 (24544): Guest Log: 00:00:00.000246 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-24 04:02:11 (24544): Guest Log: 00:00:00.000270 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-24 04:02:11 (24544): Guest Log: 00:00:00.000270 main     Process ID: 1372
2025-11-24 04:02:11 (24544): Guest Log: 00:00:00.000271 main     Package type: LINUX_64BITS_GENERIC
2025-11-24 04:02:11 (24544): Guest Log: 00:00:00.000799 main     5.2.32 r132073 started. Verbose level = 0
2025-11-24 04:02:11 (24544): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-24 04:02:11 (24544): Guest Log: [INFO] Mounting shared directory
2025-11-24 04:02:11 (24544): Guest Log: [INFO] Checking for init_data.xml
2025-11-24 04:02:19 (24544): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-24 04:02:19 (24544): Guest Log: [INFO] Detected branch: prod
2025-11-24 04:02:19 (24544): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-24 04:02:19 (24544): Guest Log: Copying input files
2025-11-24 04:02:21 (24544): Guest Log: 00:00:10.008908 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 912 682 000ns (GuestNow=1 763 917 341 101 122 000 ns GuestLast=1 763 956 930 013 804 000 ns fSetTimeLastLoop=true )
2025-11-24 04:02:22 (24544): Guest Log: Copied input files into RunAtlas.
2025-11-24 04:02:22 (24544): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-24 04:02:22 (24544): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-24 04:02:22 (24544): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-24 04:02:22 (24544): Guest Log: Further information can be found at the LHC@home message board.
2025-11-24 04:02:36 (24544): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-24 04:02:37 (24544): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-24 04:02:37 (24544): Guest Log: 2.6.3.0 1653 0 32220 153215 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-24 04:02:38 (24544): Guest Log: copied the webapp to /var/www
2025-11-24 04:02:38 (24544): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-24 04:02:38 (24544): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-24 04:02:41 (24544): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-24 04:02:41 (24544): Guest Log:  *** Starting ATLAS job. (PandaID=6895329687 taskID=47556137) ***
2025-11-24 05:41:58 (24544): Status Report: Elapsed Time: '6000.000000'
2025-11-24 05:41:58 (24544): Status Report: CPU Time: '27766.227987'
2025-11-24 07:22:06 (24544): Status Report: Elapsed Time: '12000.000000'
2025-11-24 07:22:06 (24544): Status Report: CPU Time: '74606.729445'
2025-11-24 09:02:15 (24544): Status Report: Elapsed Time: '18000.000000'
2025-11-24 09:02:15 (24544): Status Report: CPU Time: '121534.139060'
2025-11-24 10:42:23 (24544): Status Report: Elapsed Time: '24000.000000'
2025-11-24 10:42:23 (24544): Status Report: CPU Time: '168473.357950'
2025-11-24 12:22:32 (24544): Status Report: Elapsed Time: '30000.000000'
2025-11-24 12:22:32 (24544): Status Report: CPU Time: '215386.134672'
2025-11-24 14:02:41 (24544): Status Report: Elapsed Time: '36000.000000'
2025-11-24 14:02:41 (24544): Status Report: CPU Time: '262318.941921'
2025-11-24 15:42:49 (24544): Status Report: Elapsed Time: '42000.000000'
2025-11-24 15:42:49 (24544): Status Report: CPU Time: '308687.618354'
2025-11-24 15:51:23 (24544): Guest Log:  *** Job finished ***
2025-11-24 15:51:23 (24544): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:03,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:03,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:14,127 | INFO     | [monitor] cgroup control has ended
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:15,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144353032000)>', '<ExcThread(monitor, started 140143155468032)>']
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:15,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:15,608 | INFO     | [monitor] control thread has ended
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,535 | INFO     | all workflow threads have been joined
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,535 | INFO     | end of generic workflow (traces error code: 0)
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,535 | INFO     | traces error code: 0
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,644 [wrapper] ==== pilot stdout END ====
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,649 [wrapper] ==== wrapper stdout RESUME ====
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,653 [wrapper] pilotpid: 6133
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,657 [wrapper] Pilot exit status: 0
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,672 [wrapper] pandaids: 6895329687
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,698 [wrapper] cleanup supervisor_pilot 18200 6134
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,704 [wrapper] Test setup, not cleaning
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,709 [wrapper] apfmon messages muted
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,713 [wrapper] ==== wrapper stdout END ====
2025-11-24 15:51:23 (24544): Guest Log: 2025-11-24 04:51:20,716 [wrapper] ==== wrapper stderr END ====
2025-11-24 15:51:23 (24544): Guest Log:  *** Error codes and diagnostics ***
2025-11-24 15:51:23 (24544): Guest Log:     "exeErrorCode": 0,
2025-11-24 15:51:23 (24544): Guest Log:     "exeErrorDiag": "",
2025-11-24 15:51:23 (24544): Guest Log:     "pilotErrorCode": 0,
2025-11-24 15:51:23 (24544): Guest Log:     "pilotErrorDiag": "",
2025-11-24 15:51:23 (24544): Guest Log:  *** Listing of results directory ***
2025-11-24 15:51:23 (24544): Guest Log: total 919872
2025-11-24 15:51:23 (24544): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 19:29 pilot3.tar.gz
2025-11-24 15:51:23 (24544): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 19:40 queuedata.json
2025-11-24 15:51:23 (24544): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 19:40 runpilot2-wrapper.sh
2025-11-24 15:51:23 (24544): Guest Log: -rwxr-xr-x. 1 atlas atlas      5835 Nov 23 17:02 init_data.xml
2025-11-24 15:51:23 (24544): Guest Log: -rwxr-xr-x. 1 atlas atlas    590100 Nov 23 17:02 input.tar.gz
2025-11-24 15:51:23 (24544): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 23 17:02 start_atlas.sh
2025-11-24 15:51:23 (24544): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 23 17:02 EVNT.47483658._000120.pool.root.1 -> /data/./ATLAS.root_0
2025-11-24 15:51:23 (24544): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 23 17:02 pandaJob.out
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas    989785 Nov 23 17:08 agis_schedconf.cvmfs.json
2025-11-24 15:51:23 (24544): Guest Log: drwx------. 5 atlas atlas      4096 Nov 23 17:09 pilot3
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas 923270292 Nov 24 04:49 HITS.47556137._001194.pool.root.1
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas      1052 Nov 24 04:49 memory_monitor_summary.json
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas        95 Nov 24 04:50 pilot_heartbeat.json
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 24 04:50 agis_ddmendpoints.agis.ALL.json
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas   1927612 Nov 24 04:50 log.47556137._001194.job.log.tgz.1
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas      8695 Nov 24 04:50 heartbeat.json
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 24 04:51 pilotlog.txt
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas   5486313 Nov 24 04:51 log.47556137._001194.job.log.1
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas       353 Nov 24 04:51 output.list
2025-11-24 15:51:23 (24544): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 24 04:51 runtime_log
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas   7434240 Nov 24 04:51 result.tar.gz
2025-11-24 15:51:23 (24544): Guest Log: -rw-r--r--. 1 atlas atlas      8756 Nov 24 04:51 runtime_log.err
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas       663 Nov 24 04:51 43NODmoAmg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhgJKDmzF0pMm.diag
2025-11-24 15:51:23 (24544): Guest Log: Looking for outputfile HITS.47556137._001194.pool.root.1
2025-11-24 15:51:23 (24544): Guest Log: HITS file was successfully produced
2025-11-24 15:51:23 (24544): Guest Log: -rw-------. 1 atlas atlas 923270292 Nov 24 04:49 /home/atlas/RunAtlas/HITS.47556137._001194.pool.root.1
2025-11-24 15:51:26 (24544): Guest Log: Successfully finished the ATLAS job!
2025-11-24 15:51:26 (24544): Guest Log: Copying the results back to the shared directory!
2025-11-24 15:51:26 (24544): Guest Log:  *** Contents of shared directory: ***
2025-11-24 15:51:26 (24544): Guest Log: total 1308500
2025-11-24 15:51:26 (24544): Guest Log: -rwxrwxrwx. 1 root root 408579696 Nov 23 17:01 ATLAS.root_0
2025-11-24 15:51:26 (24544): Guest Log: -rwxrwxrwx. 1 root root 923270292 Nov 24 04:51 HITS.pool.root.1
2025-11-24 15:51:26 (24544): Guest Log: -rwxrwxrwx. 1 root root      5835 Nov 23 17:01 init_data.xml
2025-11-24 15:51:26 (24544): Guest Log: -rwxrwxrwx. 1 root root    590100 Nov 22 18:09 input.tar.gz
2025-11-24 15:51:26 (24544): Guest Log: -rwxrwxrwx. 1 root root   7434240 Nov 24 04:51 result.tar.gz
2025-11-24 15:51:26 (24544): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 22 18:09 start_atlas.sh
2025-11-24 15:51:26 (24544): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-24 15:51:26 (24544): VM Completion File Detected.
2025-11-24 15:51:26 (24544): Powering off VM.
2025-11-24 15:51:27 (24544): Successfully stopped VM.
2025-11-24 15:51:27 (24544): Deregistering VM. (boinc_00f265253398097e, slot#0)
2025-11-24 15:51:27 (24544): Removing network bandwidth throttle group from VM.
2025-11-24 15:51:27 (24544): Removing VM from VirtualBox.
2025-11-24 15:51:32 (24544): called boinc_finish(0)

</stderr_txt>
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