Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:14:21 (817252): wrapper (7.7.26015): starting
13:14:21 (817252): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 13:14:21] Arguments: --nthreads 8
[2025-11-22 13:14:21] Threads: 8
[2025-11-22 13:14:21] Checking for CVMFS
[2025-11-22 13:14:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 13:14:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 13:14:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 13:14:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 13:14:42] 2.13.3.0 12357 24589 261844 153180 2 574 22228039 32503808 25829 16776704 0 374575681 99.639 320474926 49057 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-22 13:14:42] CVMFS is ok
[2025-11-22 13:14:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 13:14:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 13:14:42] Further information can be found at the LHC@home message board.
[2025-11-22 13:14:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 13:14:42] Checking for apptainer binary...
[2025-11-22 13:14:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 13:14:42] Running /usr/bin/apptainer --version
[2025-11-22 13:14:42] apptainer version 1.4.4-1.el9
[2025-11-22 13:14:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 13:14:43] c8-7-2.aglt2.org
[2025-11-22 13:14:43] apptainer works
[2025-11-22 13:14:43] Set ATHENA_PROC_NUMBER=8
[2025-11-22 13:14:43] Set ATHENA_CORE_NUMBER=8
[2025-11-22 13:14:43] Starting ATLAS job with PandaID=6894283551
[2025-11-22 13:14:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 03:26:43]  *** The last 200 lines of the pilot log: ***
[2025-11-23 03:26:43] 2025-11-23 08:25:34,263 | INFO     | monitor loop #2860: job 0:6894283551 is in state 'finished'
[2025-11-23 03:26:43] 2025-11-23 08:25:34,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:26:43] 2025-11-23 08:25:36,748 | INFO     | PID=868372 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 03:26:43] 2025-11-23 08:25:36,748 | INFO     | .. there are 99 such processes running
[2025-11-23 03:26:43] 2025-11-23 08:25:36,794 | INFO     | monitor loop #2861: job 0:6894283551 is in state 'finished'
[2025-11-23 03:26:43] 2025-11-23 08:25:36,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:26:43] 2025-11-23 08:25:37,751 | INFO     | time since job start (50974s) is within the limit (172800.0s)
[2025-11-23 03:26:43] 2025-11-23 08:25:39,309 | INFO     | monitor loop #2862: job 0:6894283551 is in state 'finished'
[2025-11-23 03:26:43] 2025-11-23 08:25:39,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:26:43] 2025-11-23 08:25:39,759 | INFO     | time since job start (50976s) is within the limit (172800.0s)
[2025-11-23 03:26:43] 2025-11-23 08:25:41,766 | INFO     | time since job start (50978s) is within the limit (172800.0s)
[2025-11-23 03:26:43] 2025-11-23 08:25:41,814 | INFO     | monitor loop #2863: job 0:6894283551 is in state 'finished'
[2025-11-23 03:26:43] 2025-11-23 08:25:41,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:26:43] 2025-11-23 08:25:43,774 | INFO     | time since job start (50980s) is within the limit (172800.0s)
[2025-11-23 03:26:43] 2025-11-23 08:25:44,321 | INFO     | monitor loop #2864: job 0:6894283551 is in state 'finished'
[2025-11-23 03:26:43] 2025-11-23 08:25:44,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:26:43] 2025-11-23 08:25:45,780 | INFO     | time since job start (50982s) is within the limit (172800.0s)
[2025-11-23 03:26:43] 2025-11-23 08:25:45,785 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 03:26:43] 2025-11-23 08:25:45,798 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9376796875013
[2025-11-23 03:26:43] 2025-11-23 08:25:45,815 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894283551/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 03:26:43] 2025-11-23 08:25:45,815 | INFO     | extracted standard info from prmon json
[2025-11-23 03:26:43] 2025-11-23 08:25:45,815 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 03:26:43] 2025-11-23 08:25:45,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 03:26:43] 2025-11-23 08:25:45,851 | INFO     | fitting pss+swap vs Time
[2025-11-23 03:26:43] 2025-11-23 08:25:45,852 | INFO     | sum of square deviations: 179231631941.38528
[2025-11-23 03:26:43] 2025-11-23 08:25:45,860 | INFO     | sum of deviations: 12193354418937.742
[2025-11-23 03:26:43] 2025-11-23 08:25:45,860 | INFO     | mean x: 1763860909.9255702
[2025-11-23 03:26:43] 2025-11-23 08:25:45,860 | INFO     | mean y: 3785008.899159664
[2025-11-23 03:26:43] 2025-11-23 08:25:45,861 | INFO     | intersect: -119993901713.42076
[2025-11-23 03:26:43] 2025-11-23 08:25:45,873 | INFO     | chi2: 83.27660726815877
[2025-11-23 03:26:43] 2025-11-23 08:25:45,874 | INFO     | sum of square deviations: 176023903067.47815
[2025-11-23 03:26:43] 2025-11-23 08:25:45,882 | INFO     | sum of deviations: 12611904783114.303
[2025-11-23 03:26:43] 2025-11-23 08:25:45,882 | INFO     | mean x: 1763860757.4347825
[2025-11-23 03:26:43] 2025-11-23 08:25:45,882 | INFO     | mean y: 3804901.3852657005
[2025-11-23 03:26:43] 2025-11-23 08:25:45,882 | INFO     | intersect: -126374735375.11093
[2025-11-23 03:26:43] 2025-11-23 08:25:45,883 | INFO     | chi2: 77.11001960901788
[2025-11-23 03:26:43] 2025-11-23 08:25:45,883 | INFO     | current chi2=77.11001960901788 (change=7.404945832247796 %)
[2025-11-23 03:26:43] 2025-11-23 08:25:45,883 | INFO     | right removable region: 827
[2025-11-23 03:26:43] 2025-11-23 08:25:45,883 | INFO     | sum of square deviations: 176023026737.73462
[2025-11-23 03:26:43] 2025-11-23 08:25:45,891 | INFO     | sum of deviations: 11734181609286.166
[2025-11-23 03:26:43] 2025-11-23 08:25:45,891 | INFO     | mean x: 1763861062.4371982
[2025-11-23 03:26:43] 2025-11-23 08:25:45,891 | INFO     | mean y: 3806831.935990338
[2025-11-23 03:26:43] 2025-11-23 08:25:45,892 | INFO     | intersect: -117580048097.5938
[2025-11-23 03:26:43] 2025-11-23 08:25:45,892 | INFO     | chi2: 79.09592992398939
[2025-11-23 03:26:43] 2025-11-23 08:25:45,892 | INFO     | current chi2=79.09592992398939 (change=5.020230147833947 %)
[2025-11-23 03:26:43] 2025-11-23 08:25:45,892 | INFO     | left removable region: 10
[2025-11-23 03:26:43] 2025-11-23 08:25:45,893 | INFO     | sum of square deviations: 169100404428.74658
[2025-11-23 03:26:43] 2025-11-23 08:25:45,900 | INFO     | sum of deviations: 11816133621170.422
[2025-11-23 03:26:43] 2025-11-23 08:25:45,900 | INFO     | mean x: 1763861031.9608324
[2025-11-23 03:26:43] 2025-11-23 08:25:45,900 | INFO     | mean y: 3851001.9192166463
[2025-11-23 03:26:43] 2025-11-23 08:25:45,900 | INFO     | intersect: -123248471860.54263
[2025-11-23 03:26:43] 2025-11-23 08:25:45,901 | INFO     | chi2: 68.7859274165374
[2025-11-23 03:26:43] 2025-11-23 08:25:45,901 | INFO     | current memory leak: 69.88 B/s (using 817 data points, chi2=68.79)
[2025-11-23 03:26:43] 2025-11-23 08:25:45,901 | INFO     | could have reported an average CPU frequency of 3791 MHz (31 samples)
[2025-11-23 03:26:43] 2025-11-23 08:25:45,902 | INFO     | ..............................
[2025-11-23 03:26:43] 2025-11-23 08:25:45,902 | INFO     | . Timing measurements:
[2025-11-23 03:26:43] 2025-11-23 08:25:45,902 | INFO     | . get job = 0 s
[2025-11-23 03:26:43] 2025-11-23 08:25:45,902 | INFO     | . initial setup = 7 s
[2025-11-23 03:26:43] 2025-11-23 08:25:45,902 | INFO     | . payload setup = 51 s
[2025-11-23 03:26:43] 2025-11-23 08:25:45,902 | INFO     | . stage-in = 0 s
[2025-11-23 03:26:43] 2025-11-23 08:25:45,902 | INFO     | . payload execution = 50786 s
[2025-11-23 03:26:43] 2025-11-23 08:25:45,902 | INFO     | . stage-out = 7 s
[2025-11-23 03:26:43] 2025-11-23 08:25:45,902 | INFO     | . log creation = 2 s
[2025-11-23 03:26:43] 2025-11-23 08:25:45,902 | INFO     | ..............................
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | 
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | job summary report
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | --------------------------------------------------
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | PanDA job id: 6894283551
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | task id: 47533967
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | errors: (none)
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | pilot state: finished 
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | transexitcode: 0
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | exeerrorcode: 0
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | exeerrordiag: 
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | exitcode: 0
[2025-11-23 03:26:43] 2025-11-23 08:25:46,244 | INFO     | exitmsg: OK
[2025-11-23 03:26:43] 2025-11-23 08:25:46,245 | INFO     | cpuconsumptiontime: 139609 s
[2025-11-23 03:26:43] 2025-11-23 08:25:46,245 | INFO     | nevents: 1000
[2025-11-23 03:26:43] 2025-11-23 08:25:46,245 | INFO     | neventsw: 0
[2025-11-23 03:26:43] 2025-11-23 08:25:46,245 | INFO     | pid: 953173
[2025-11-23 03:26:43] 2025-11-23 08:25:46,245 | INFO     | pgrp: 953173
[2025-11-23 03:26:43] 2025-11-23 08:25:46,245 | INFO     | corecount: 8
[2025-11-23 03:26:43] 2025-11-23 08:25:46,245 | INFO     | event service: False
[2025-11-23 03:26:43] 2025-11-23 08:25:46,245 | INFO     | sizes: {0: 2297979, 1: 2298835, 12: 2298835, 23: 2298863, 34: 2298891, 43: 2299181, 44: 2299337, 50846: 2345921, 50853: 2354915, 50856: 2354971, 50899: 2355217}
[2025-11-23 03:26:43] 2025-11-23 08:25:46,245 | INFO     | --------------------------------------------------
[2025-11-23 03:26:43] 2025-11-23 08:25:46,245 | INFO     | 
[2025-11-23 03:26:43] 2025-11-23 08:25:46,245 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,445 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,445 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,445 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 03:26:43] 2025-11-23 08:25:46,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,445 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 03:26:43] 2025-11-23 08:25:46,445 | INFO     | job 6894283551 has completed (purged errors)
[2025-11-23 03:26:43] 2025-11-23 08:25:46,445 | INFO     | overall cleanup function is called
[2025-11-23 03:26:43] 2025-11-23 08:25:47,623 | INFO     | --- collectZombieJob: --- 10, [953173]
[2025-11-23 03:26:43] 2025-11-23 08:25:47,623 | INFO     | zombie collector waiting for pid 953173
[2025-11-23 03:26:43] 2025-11-23 08:25:47,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 03:26:43] 2025-11-23 08:25:47,623 | INFO     | collected zombie processes
[2025-11-23 03:26:43] 2025-11-23 08:25:47,623 | INFO     | will attempt to kill all subprocesses of pid=953173
[2025-11-23 03:26:43] 2025-11-23 08:25:56,828 | INFO     | process IDs to be killed: [953173] (in reverse order)
[2025-11-23 03:26:43] 2025-11-23 08:25:57,834 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 03:26:43] 2025-11-23 08:25:57,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 03:26:43] 2025-11-23 08:26:00,361 | INFO     | did not find any defunct processes belonging to 953173
[2025-11-23 03:26:43] 2025-11-23 08:26:01,791 | INFO     | did not find any defunct processes belonging to 953173
[2025-11-23 03:26:43] 2025-11-23 08:26:01,819 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:26:43] 2025-11-23 08:26:01,819 | INFO     | ready for new job
[2025-11-23 03:26:43] 2025-11-23 08:26:01,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 03:26:43] 2025-11-23 08:26:01,836 | INFO     | ***************************************
[2025-11-23 03:26:43] 2025-11-23 08:26:01,836 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 03:26:43] 2025-11-23 08:26:01,836 | INFO     | ***************************************
[2025-11-23 03:26:43] 2025-11-23 08:26:01,836 | INFO     | 
[2025-11-23 03:26:43] 2025-11-23 08:26:01,841 | INFO     | architecture information:
[2025-11-23 03:26:43] 2025-11-23 08:26:01,841 | INFO     | executing command: cat /etc/os-release
[2025-11-23 03:26:43] 2025-11-23 08:26:01,922 | INFO     | cat /etc/os-release:
[2025-11-23 03:26:43] NAME="CentOS Linux"
[2025-11-23 03:26:43] VERSION="7 (Core)"
[2025-11-23 03:26:43] ID="centos"
[2025-11-23 03:26:43] ID_LIKE="rhel fedora"
[2025-11-23 03:26:43] VERSION_ID="7"
[2025-11-23 03:26:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 03:26:43] ANSI_COLOR="0;31"
[2025-11-23 03:26:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 03:26:43] HOME_URL="https://www.centos.org/"
[2025-11-23 03:26:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 03:26:43] 
[2025-11-23 03:26:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 03:26:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 03:26:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 03:26:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 03:26:43] 
[2025-11-23 03:26:43] 2025-11-23 08:26:01,922 | INFO     | ***************************************
[2025-11-23 03:26:43] 2025-11-23 08:26:02,426 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 03:26:43] 2025-11-23 08:26:02,486 | INFO     | sufficient remaining disk space (77421608960 B)
[2025-11-23 03:26:43] 2025-11-23 08:26:02,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 03:26:43] 2025-11-23 08:26:02,487 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 03:26:43] 2025-11-23 08:26:02,487 | INFO     | update_server=False
[2025-11-23 03:26:43] 2025-11-23 08:26:02,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 03:26:43] 2025-11-23 08:26:02,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:26:43] 2025-11-23 08:26:02,488 | INFO     | aborting loop
[2025-11-23 03:26:43] 2025-11-23 08:26:02,988 | INFO     | all payload control threads have been joined
[2025-11-23 03:26:43] 2025-11-23 08:26:03,189 | INFO     | all job control threads have been joined
[2025-11-23 03:26:43] 2025-11-23 08:26:03,411 | INFO     | all data control threads have been joined
[2025-11-23 03:26:43] 2025-11-23 08:26:03,493 | INFO     | [job] retrieve thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:03,507 | INFO     | [job] job monitor thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:03,588 | INFO     | [data] copytool_in thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:03,591 | INFO     | [job] validate thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:03,595 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:03,599 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:03,627 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:03,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 03:26:43] 2025-11-23 08:26:03,975 | INFO     | [payload] failed_post thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:03,995 | INFO     | [payload] control thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:04,181 | INFO     | [payload] validate_post thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:04,195 | INFO     | [job] control thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:04,417 | INFO     | [data] control thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:04,871 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:26:43] 2025-11-23 08:26:04,933 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:05,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 03:26:43] 2025-11-23 08:26:05,877 | INFO     | [job] queue monitor thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:05,882 | INFO     | [data] copytool_out thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:09,389 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 03:26:43] 2025-11-23 08:26:22,200 | INFO     | PID=868372 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 03:26:43] 2025-11-23 08:26:22,201 | INFO     | .. there are 98 such processes running
[2025-11-23 03:26:43] 2025-11-23 08:26:22,201 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 03:26:43] 2025-11-23 08:26:22,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 03:26:43] 2025-11-23 08:26:22,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 03:26:43] 2025-11-23 08:26:31,312 | INFO     | [monitor] cgroup control has ended
[2025-11-23 03:26:43] 2025-11-23 08:26:32,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140589008336704)>', '<ExcThread(monitor, started 140588271777536)>']
[2025-11-23 03:26:43] 2025-11-23 08:26:33,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 03:26:43] 2025-11-23 08:26:33,290 | INFO     | [monitor] control thread has ended
[2025-11-23 03:26:43] 2025-11-23 08:26:37,483 | INFO     | all workflow threads have been joined
[2025-11-23 03:26:43] 2025-11-23 08:26:37,485 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 03:26:43] 2025-11-23 08:26:37,501 | INFO     | traces error code: 0
[2025-11-23 03:26:43] 2025-11-23 08:26:37,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 03:26:43] 2025-11-23 08:26:38,862 [wrapper] ==== pilot stdout END ====
[2025-11-23 03:26:43] 2025-11-23 08:26:38,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 03:26:43] 2025-11-23 08:26:38,956 [wrapper] pilotpid: 868372
[2025-11-23 03:26:43] 2025-11-23 08:26:39,207 [wrapper] Pilot exit status: 0
[2025-11-23 03:26:43] 2025-11-23 08:26:39,684 [wrapper] pandaids: 6894283551
[2025-11-23 03:26:43] 2025-11-23 08:26:41,494 [wrapper] cleanup supervisor_pilot 3670849 868373
[2025-11-23 03:26:43] 2025-11-23 08:26:41,531 [wrapper] Test setup, not cleaning
[2025-11-23 03:26:43] 2025-11-23 08:26:41,598 [wrapper] apfmon messages muted
[2025-11-23 03:26:43] 2025-11-23 08:26:41,638 [wrapper] ==== wrapper stdout END ====
[2025-11-23 03:26:43] 2025-11-23 08:26:41,669 [wrapper] ==== wrapper stderr END ====
[2025-11-23 03:26:43]  *** Error codes and diagnostics ***
[2025-11-23 03:26:43]     "exeErrorCode": 0,
[2025-11-23 03:26:43]     "exeErrorDiag": "",
[2025-11-23 03:26:43]     "pilotErrorCode": 0,
[2025-11-23 03:26:43]     "pilotErrorDiag": "",
[2025-11-23 03:26:43]  *** Listing of results directory ***
[2025-11-23 03:26:43] total 1330604
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 04:12 pilot3.tar.gz
[2025-11-23 03:26:43] -rwx------. 1 boincer umatlas     36292 Nov 21 04:27 runpilot2-wrapper.sh
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 04:27 queuedata.json
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas       100 Nov 22 13:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 03:26:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 13:14 run_atlas
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas       105 Nov 22 13:14 job.xml
[2025-11-23 03:26:43] -rw-r--r--. 2 boincer umatlas 409584061 Nov 22 13:14 EVNT.47493127._002349.pool.root.1
[2025-11-23 03:26:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 13:14 start_atlas.sh
[2025-11-23 03:26:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 13:14 shared
[2025-11-23 03:26:43] -rw-r--r--. 2 boincer umatlas    590109 Nov 22 13:14 input.tar.gz
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas         0 Nov 22 13:14 boinc_lockfile
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas      2786 Nov 22 13:14 pandaJob.out
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas      2072 Nov 22 13:14 stderr.txt
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas        57 Nov 22 13:14 setup.sh.local
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas    989776 Nov 22 13:15 agis_schedconf.cvmfs.json
[2025-11-23 03:26:43] drwx------. 5 boincer umatlas      4096 Nov 22 13:16 pilot3
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas       532 Nov 23 02:31 boinc_task_state.xml
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas      7171 Nov 23 03:20 init_data.xml
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas 932757827 Nov 23 03:23 HITS.47533967._003207.pool.root.1
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas      1080 Nov 23 03:24 memory_monitor_summary.json
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas   1526164 Nov 23 03:24 agis_ddmendpoints.agis.ALL.json
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas   1996626 Nov 23 03:24 log.47533967._003207.job.log.tgz.1
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas        95 Nov 23 03:25 pilot_heartbeat.json
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas      7955 Nov 23 03:25 heartbeat.json
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas      4823 Nov 23 03:26 pilotlog.txt
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 03:26 boinc_mmap_file
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas        29 Nov 23 03:26 wrapper_checkpoint.txt
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas   6150068 Nov 23 03:26 log.47533967._003207.job.log.1
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas       353 Nov 23 03:26 output.list
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas       620 Nov 23 03:26 runtime_log
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas   8161280 Nov 23 03:26 result.tar.gz
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas       664 Nov 23 03:26 zkuNDmMbcg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPVHKDmrneGbn.diag
[2025-11-23 03:26:43] -rw-r--r--. 1 boincer umatlas      9333 Nov 23 03:26 runtime_log.err
[2025-11-23 03:26:43] HITS file was successfully produced:
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas 932757827 Nov 23 03:23 shared/HITS.pool.root.1
[2025-11-23 03:26:43]  *** Contents of shared directory: ***
[2025-11-23 03:26:43] total 1319464
[2025-11-23 03:26:43] -rw-r--r--. 2 boincer umatlas 409584061 Nov 22 13:14 ATLAS.root_0
[2025-11-23 03:26:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 13:14 start_atlas.sh
[2025-11-23 03:26:43] -rw-r--r--. 2 boincer umatlas    590109 Nov 22 13:14 input.tar.gz
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas 932757827 Nov 23 03:23 HITS.pool.root.1
[2025-11-23 03:26:43] -rw-------. 1 boincer umatlas   8161280 Nov 23 03:26 result.tar.gz
03:26:45 (817252): run_atlas exited; CPU time 140832.763560
03:26:45 (817252): called boinc_finish(0)

</stderr_txt>
]]>

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