Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:35:25 (13853): wrapper (7.7.26015): starting
12:35:25 (13853): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 12:35:25] Arguments: --nthreads 8
[2025-11-22 12:35:25] Threads: 8
[2025-11-22 12:35:25] Checking for CVMFS
[2025-11-22 12:35:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 12:35:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 12:35:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 12:35:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 12:35:26] 2.11.2.0 2804 34637 84892 153180 3 82 11159044 20275201 1 130560 0 3463659 99.320 2633061 28456 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 12:35:26] CVMFS is ok
[2025-11-22 12:35:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 12:35:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 12:35:26] Further information can be found at the LHC@home message board.
[2025-11-22 12:35:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 12:35:26] Checking for apptainer binary...
[2025-11-22 12:35:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 12:35:26] Running /usr/bin/apptainer --version
[2025-11-22 12:35:26] apptainer version 1.3.2-1.el7
[2025-11-22 12:35:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 12:35:28] c-204-3.aglt2.org
[2025-11-22 12:35:28] apptainer works
[2025-11-22 12:35:28] Set ATHENA_PROC_NUMBER=8
[2025-11-22 12:35:28] Set ATHENA_CORE_NUMBER=8
[2025-11-22 12:35:28] Starting ATLAS job with PandaID=6895329308
[2025-11-22 12:35:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 01:02:06]  *** The last 200 lines of the pilot log: ***
[2025-11-23 01:02:06] 2025-11-23 06:01:42,146 | INFO     | monitor loop #3289: job 0:6895329308 is in state 'finished'
[2025-11-23 01:02:06] 2025-11-23 06:01:42,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,638 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 01:02:06] 2025-11-23 06:01:43,643 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-23 01:02:06] 2025-11-23 06:01:43,645 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895329308/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,646 | INFO     | extracted standard info from prmon json
[2025-11-23 01:02:06] 2025-11-23 06:01:43,647 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 01:02:06] 2025-11-23 06:01:43,647 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 01:02:06] 2025-11-23 06:01:43,660 | INFO     | fitting pss+swap vs Time
[2025-11-23 01:02:06] 2025-11-23 06:01:43,661 | INFO     | sum of square deviations: 122120324870.18823
[2025-11-23 01:02:06] 2025-11-23 06:01:43,672 | INFO     | sum of deviations: 709503168707.2686
[2025-11-23 01:02:06] 2025-11-23 06:01:43,673 | INFO     | mean x: 1763855304.611187
[2025-11-23 01:02:06] 2025-11-23 06:01:43,673 | INFO     | mean y: 3198408.1869031377
[2025-11-23 01:02:06] 2025-11-23 06:01:43,673 | INFO     | intersect: -10244570987.227354
[2025-11-23 01:02:06] 2025-11-23 06:01:43,674 | INFO     | chi2: 6.396905154896678
[2025-11-23 01:02:06] 2025-11-23 06:01:43,675 | INFO     | sum of square deviations: 119638405668.30775
[2025-11-23 01:02:06] 2025-11-23 06:01:43,686 | INFO     | sum of deviations: 966944415091.8467
[2025-11-23 01:02:06] 2025-11-23 06:01:43,686 | INFO     | mean x: 1763855152.1153846
[2025-11-23 01:02:06] 2025-11-23 06:01:43,686 | INFO     | mean y: 3214220.478021978
[2025-11-23 01:02:06] 2025-11-23 06:01:43,686 | INFO     | intersect: -14252658539.123215
[2025-11-23 01:02:06] 2025-11-23 06:01:43,687 | INFO     | chi2: 3.547675974561238
[2025-11-23 01:02:06] 2025-11-23 06:01:43,687 | INFO     | current chi2=3.547675974561238 (change=44.54074449039507 %)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,688 | INFO     | sum of square deviations: 117190347566.40218
[2025-11-23 01:02:06] 2025-11-23 06:01:43,699 | INFO     | sum of deviations: 1084347956133.9792
[2025-11-23 01:02:06] 2025-11-23 06:01:43,699 | INFO     | mean x: 1763854999.6196404
[2025-11-23 01:02:06] 2025-11-23 06:01:43,699 | INFO     | mean y: 3221531.3817427387
[2025-11-23 01:02:06] 2025-11-23 06:01:43,699 | INFO     | intersect: -16317513097.982895
[2025-11-23 01:02:06] 2025-11-23 06:01:43,700 | INFO     | chi2: 2.8750061097366446
[2025-11-23 01:02:06] 2025-11-23 06:01:43,700 | INFO     | current chi2=2.8750061097366446 (change=18.960859719095012 %)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,700 | INFO     | right removable region: 722
[2025-11-23 01:02:06] 2025-11-23 06:01:43,701 | INFO     | sum of square deviations: 119638132388.3078
[2025-11-23 01:02:06] 2025-11-23 06:01:43,712 | INFO     | sum of deviations: 475242022405.38605
[2025-11-23 01:02:06] 2025-11-23 06:01:43,712 | INFO     | mean x: 1763855457.1153846
[2025-11-23 01:02:06] 2025-11-23 06:01:43,712 | INFO     | mean y: 3212776.912087912
[2025-11-23 01:02:06] 2025-11-23 06:01:43,713 | INFO     | intersect: -7003401401.496926
[2025-11-23 01:02:06] 2025-11-23 06:01:43,713 | INFO     | chi2: 3.887541629447753
[2025-11-23 01:02:06] 2025-11-23 06:01:43,714 | INFO     | current chi2=3.887541629447753 (change=39.22777444227178 %)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,714 | INFO     | sum of square deviations: 117189933987.10652
[2025-11-23 01:02:06] 2025-11-23 06:01:43,725 | INFO     | sum of deviations: 430099885282.72595
[2025-11-23 01:02:06] 2025-11-23 06:01:43,725 | INFO     | mean x: 1763855609.615491
[2025-11-23 01:02:06] 2025-11-23 06:01:43,725 | INFO     | mean y: 3215587.5601659752
[2025-11-23 01:02:06] 2025-11-23 06:01:43,726 | INFO     | intersect: -6470327570.4586935
[2025-11-23 01:02:06] 2025-11-23 06:01:43,726 | INFO     | chi2: 3.8431136216025616
[2025-11-23 01:02:06] 2025-11-23 06:01:43,727 | INFO     | current chi2=3.8431136216025616 (change=1.1428304074907814 %)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,727 | INFO     | left removable region: 20
[2025-11-23 01:02:06] 2025-11-23 06:01:43,727 | INFO     | sum of square deviations: 107272275179.71713
[2025-11-23 01:02:06] 2025-11-23 06:01:43,738 | INFO     | sum of deviations: 775641372750.2247
[2025-11-23 01:02:06] 2025-11-23 06:01:43,738 | INFO     | mean x: 1763855579.1267805
[2025-11-23 01:02:06] 2025-11-23 06:01:43,738 | INFO     | mean y: 3243923.01994302
[2025-11-23 01:02:06] 2025-11-23 06:01:43,738 | INFO     | intersect: -12750464902.815798
[2025-11-23 01:02:06] 2025-11-23 06:01:43,739 | INFO     | chi2: 0.1711688764470691
[2025-11-23 01:02:06] 2025-11-23 06:01:43,739 | INFO     | current memory leak: 7.23 B/s (using 702 data points, chi2=0.17)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,740 | INFO     | could have reported an average CPU frequency of 2155 MHz (28 samples)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,740 | INFO     | ..............................
[2025-11-23 01:02:06] 2025-11-23 06:01:43,740 | INFO     | . Timing measurements:
[2025-11-23 01:02:06] 2025-11-23 06:01:43,740 | INFO     | . get job = 0 s
[2025-11-23 01:02:06] 2025-11-23 06:01:43,740 | INFO     | . initial setup = 2 s
[2025-11-23 01:02:06] 2025-11-23 06:01:43,740 | INFO     | . payload setup = 8 s
[2025-11-23 01:02:06] 2025-11-23 06:01:43,740 | INFO     | . stage-in = 0 s
[2025-11-23 01:02:06] 2025-11-23 06:01:43,741 | INFO     | . payload execution = 44713 s
[2025-11-23 01:02:06] 2025-11-23 06:01:43,741 | INFO     | . stage-out = 3 s
[2025-11-23 01:02:06] 2025-11-23 06:01:43,741 | INFO     | . log creation = 0 s
[2025-11-23 01:02:06] 2025-11-23 06:01:43,741 | INFO     | ..............................
[2025-11-23 01:02:06] 2025-11-23 06:01:43,814 | INFO     | time since job start (44757s) is within the limit (172800.0s)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,836 | INFO     | 
[2025-11-23 01:02:06] 2025-11-23 06:01:43,836 | INFO     | job summary report
[2025-11-23 01:02:06] 2025-11-23 06:01:43,837 | INFO     | --------------------------------------------------
[2025-11-23 01:02:06] 2025-11-23 06:01:43,837 | INFO     | PanDA job id: 6895329308
[2025-11-23 01:02:06] 2025-11-23 06:01:43,837 | INFO     | task id: 47556137
[2025-11-23 01:02:06] 2025-11-23 06:01:43,837 | INFO     | errors: (none)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,837 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 01:02:06] 2025-11-23 06:01:43,838 | INFO     | pilot state: finished 
[2025-11-23 01:02:06] 2025-11-23 06:01:43,838 | INFO     | transexitcode: 0
[2025-11-23 01:02:06] 2025-11-23 06:01:43,838 | INFO     | exeerrorcode: 0
[2025-11-23 01:02:06] 2025-11-23 06:01:43,838 | INFO     | exeerrordiag: 
[2025-11-23 01:02:06] 2025-11-23 06:01:43,838 | INFO     | exitcode: 0
[2025-11-23 01:02:06] 2025-11-23 06:01:43,838 | INFO     | exitmsg: OK
[2025-11-23 01:02:06] 2025-11-23 06:01:43,839 | INFO     | cpuconsumptiontime: 346039 s
[2025-11-23 01:02:06] 2025-11-23 06:01:43,839 | INFO     | nevents: 1000
[2025-11-23 01:02:06] 2025-11-23 06:01:43,839 | INFO     | neventsw: 0
[2025-11-23 01:02:06] 2025-11-23 06:01:43,839 | INFO     | pid: 24036
[2025-11-23 01:02:06] 2025-11-23 06:01:43,839 | INFO     | pgrp: 24036
[2025-11-23 01:02:06] 2025-11-23 06:01:43,839 | INFO     | corecount: 8
[2025-11-23 01:02:06] 2025-11-23 06:01:43,840 | INFO     | event service: False
[2025-11-23 01:02:06] 2025-11-23 06:01:43,840 | INFO     | sizes: {0: 2298523, 1: 2298778, 7: 2299040, 12: 2299068, 44725: 2344878, 44730: 2353872, 44733: 2354056, 44740: 2354302}
[2025-11-23 01:02:06] 2025-11-23 06:01:43,840 | INFO     | --------------------------------------------------
[2025-11-23 01:02:06] 2025-11-23 06:01:43,840 | INFO     | 
[2025-11-23 01:02:06] 2025-11-23 06:01:43,840 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 01:02:06] 2025-11-23 06:01:43,871 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,871 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,871 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,872 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,872 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,872 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,872 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,872 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,874 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,875 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 01:02:06] 2025-11-23 06:01:43,875 | INFO     | job 6895329308 has completed (purged errors)
[2025-11-23 01:02:06] 2025-11-23 06:01:43,875 | INFO     | overall cleanup function is called
[2025-11-23 01:02:06] 2025-11-23 06:01:44,885 | INFO     | --- collectZombieJob: --- 10, [24036]
[2025-11-23 01:02:06] 2025-11-23 06:01:44,885 | INFO     | zombie collector waiting for pid 24036
[2025-11-23 01:02:06] 2025-11-23 06:01:44,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 01:02:06] 2025-11-23 06:01:44,885 | INFO     | collected zombie processes
[2025-11-23 01:02:06] 2025-11-23 06:01:44,885 | INFO     | will attempt to kill all subprocesses of pid=24036
[2025-11-23 01:02:06] 2025-11-23 06:01:44,979 | INFO     | process IDs to be killed: [24036] (in reverse order)
[2025-11-23 01:02:06] 2025-11-23 06:01:45,040 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 01:02:06] 2025-11-23 06:01:45,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 01:02:06] 2025-11-23 06:01:45,045 | INFO     | did not find any defunct processes belonging to 24036
[2025-11-23 01:02:06] 2025-11-23 06:01:45,047 | INFO     | did not find any defunct processes belonging to 24036
[2025-11-23 01:02:06] 2025-11-23 06:01:45,050 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 01:02:06] 2025-11-23 06:01:45,050 | INFO     | ready for new job
[2025-11-23 01:02:06] 2025-11-23 06:01:45,050 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 01:02:06] 2025-11-23 06:01:45,054 | INFO     | ***************************************
[2025-11-23 01:02:06] 2025-11-23 06:01:45,054 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 01:02:06] 2025-11-23 06:01:45,054 | INFO     | ***************************************
[2025-11-23 01:02:06] 2025-11-23 06:01:45,054 | INFO     | 
[2025-11-23 01:02:06] 2025-11-23 06:01:45,055 | INFO     | architecture information:
[2025-11-23 01:02:06] 2025-11-23 06:01:45,056 | INFO     | executing command: cat /etc/os-release
[2025-11-23 01:02:06] 2025-11-23 06:01:45,076 | INFO     | cat /etc/os-release:
[2025-11-23 01:02:06] NAME="CentOS Linux"
[2025-11-23 01:02:06] VERSION="7 (Core)"
[2025-11-23 01:02:06] ID="centos"
[2025-11-23 01:02:06] ID_LIKE="rhel fedora"
[2025-11-23 01:02:06] VERSION_ID="7"
[2025-11-23 01:02:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 01:02:06] ANSI_COLOR="0;31"
[2025-11-23 01:02:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 01:02:06] HOME_URL="https://www.centos.org/"
[2025-11-23 01:02:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 01:02:06] 
[2025-11-23 01:02:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 01:02:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 01:02:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 01:02:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 01:02:06] 
[2025-11-23 01:02:06] 2025-11-23 06:01:45,077 | INFO     | ***************************************
[2025-11-23 01:02:06] 2025-11-23 06:01:45,580 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 01:02:06] 2025-11-23 06:01:45,603 | INFO     | sufficient remaining disk space (17454596096 B)
[2025-11-23 01:02:06] 2025-11-23 06:01:45,603 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 01:02:06] 2025-11-23 06:01:45,603 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 01:02:06] 2025-11-23 06:01:45,604 | INFO     | update_server=False
[2025-11-23 01:02:06] 2025-11-23 06:01:45,604 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 01:02:06] 2025-11-23 06:01:45,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:02:06] 2025-11-23 06:01:45,605 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 01:02:06] 2025-11-23 06:01:45,605 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 01:02:06] 2025-11-23 06:01:45,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 01:02:06] 2025-11-23 06:01:45,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 01:02:06] 2025-11-23 06:01:45,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:02:06] 2025-11-23 06:01:45,655 | INFO     | aborting loop
[2025-11-23 01:02:06] 2025-11-23 06:01:46,128 | INFO     | all data control threads have been joined
[2025-11-23 01:02:06] 2025-11-23 06:01:46,259 | INFO     | all payload control threads have been joined
[2025-11-23 01:02:06] 2025-11-23 06:01:46,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 01:02:06] 2025-11-23 06:01:46,610 | INFO     | [job] retrieve thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:46,610 | INFO     | [job] queue monitor thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:46,661 | INFO     | [job] job monitor thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:47,074 | INFO     | [payload] failed_post thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:47,133 | INFO     | [data] control thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:47,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 01:02:06] 2025-11-23 06:01:47,217 | INFO     | all job control threads have been joined
[2025-11-23 01:02:06] 2025-11-23 06:01:47,265 | INFO     | [payload] control thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:47,432 | INFO     | [job] validate thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:47,465 | INFO     | [data] copytool_in thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:47,476 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:47,520 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:47,657 | INFO     | [payload] validate_post thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:47,873 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:48,222 | INFO     | [job] control thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:48,536 | INFO     | [data] copytool_out thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:51,196 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:56,139 | INFO     | job.realtimelogging is not enabled
[2025-11-23 01:02:06] 2025-11-23 06:01:57,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 01:02:06] 2025-11-23 06:01:59,705 | INFO     | [monitor] cgroup control has ended
[2025-11-23 01:02:06] 2025-11-23 06:02:00,861 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656275154752)>', '<ExcThread(monitor, started 139655978653440)>']
[2025-11-23 01:02:06] 2025-11-23 06:02:01,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 01:02:06] 2025-11-23 06:02:01,664 | INFO     | [monitor] control thread has ended
[2025-11-23 01:02:06] 2025-11-23 06:02:05,886 | INFO     | all workflow threads have been joined
[2025-11-23 01:02:06] 2025-11-23 06:02:05,887 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 01:02:06] 2025-11-23 06:02:05,887 | INFO     | traces error code: 0
[2025-11-23 01:02:06] 2025-11-23 06:02:05,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 01:02:06] 2025-11-23 06:02:06,009 [wrapper] ==== pilot stdout END ====
[2025-11-23 01:02:06] 2025-11-23 06:02:06,014 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 01:02:06] 2025-11-23 06:02:06,019 [wrapper] pilotpid: 17610
[2025-11-23 01:02:06] 2025-11-23 06:02:06,023 [wrapper] Pilot exit status: 0
[2025-11-23 01:02:06] 2025-11-23 06:02:06,042 [wrapper] pandaids: 6895329308
[2025-11-23 01:02:06] 2025-11-23 06:02:06,089 [wrapper] cleanup supervisor_pilot 28533 17611
[2025-11-23 01:02:06] 2025-11-23 06:02:06,095 [wrapper] Test setup, not cleaning
[2025-11-23 01:02:06] 2025-11-23 06:02:06,100 [wrapper] apfmon messages muted
[2025-11-23 01:02:06] 2025-11-23 06:02:06,105 [wrapper] ==== wrapper stdout END ====
[2025-11-23 01:02:06] 2025-11-23 06:02:06,109 [wrapper] ==== wrapper stderr END ====
[2025-11-23 01:02:06]  *** Error codes and diagnostics ***
[2025-11-23 01:02:06]     "exeErrorCode": 0,
[2025-11-23 01:02:06]     "exeErrorDiag": "",
[2025-11-23 01:02:06]     "pilotErrorCode": 0,
[2025-11-23 01:02:06]     "pilotErrorDiag": "",
[2025-11-23 01:02:06]  *** Listing of results directory ***
[2025-11-23 01:02:06] total 1331336
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 13:54 pilot3.tar.gz
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 13:55 queuedata.json
[2025-11-23 01:02:06] -rwx------ 1 boincer umatlas     36292 Nov 21 13:55 runpilot2-wrapper.sh
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas       100 Nov 22 12:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 01:02:06] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 12:35 run_atlas
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas       105 Nov 22 12:35 job.xml
[2025-11-23 01:02:06] -rw-r--r-- 2 boincer umatlas 411775701 Nov 22 12:35 EVNT.47483658._000110.pool.root.1
[2025-11-23 01:02:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 12:35 start_atlas.sh
[2025-11-23 01:02:06] drwxrwx--x 2 boincer umatlas      4096 Nov 22 12:35 shared
[2025-11-23 01:02:06] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 12:35 input.tar.gz
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas         0 Nov 22 12:35 boinc_lockfile
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas      2782 Nov 22 12:35 pandaJob.out
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas        57 Nov 22 12:35 setup.sh.local
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas    989776 Nov 22 12:35 agis_schedconf.cvmfs.json
[2025-11-23 01:02:06] drwx------ 5 boincer umatlas      4096 Nov 22 12:35 pilot3
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas       533 Nov 23 00:46 boinc_task_state.xml
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas 931327141 Nov 23 01:00 HITS.47556137._001091.pool.root.1
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas        95 Nov 23 01:00 pilot_heartbeat.json
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas      1064 Nov 23 01:01 memory_monitor_summary.json
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas   1526164 Nov 23 01:01 agis_ddmendpoints.agis.ALL.json
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas   1972486 Nov 23 01:01 log.47556137._001091.job.log.tgz.1
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas      5910 Nov 23 01:01 init_data.xml
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas      8666 Nov 23 01:01 heartbeat.json
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 01:01 boinc_mmap_file
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas        29 Nov 23 01:01 wrapper_checkpoint.txt
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas      4624 Nov 23 01:02 pilotlog.txt
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas   6156261 Nov 23 01:02 log.47556137._001091.job.log.1
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas       353 Nov 23 01:02 output.list
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas       620 Nov 23 01:02 runtime_log
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas   8151040 Nov 23 01:02 result.tar.gz
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 01:02 runtime_log.err
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas       667 Nov 23 01:02 FNoLDmoSlg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfeJKDm7l5ZVo.diag
[2025-11-23 01:02:06] -rw-r--r-- 1 boincer umatlas     21210 Nov 23 01:02 stderr.txt
[2025-11-23 01:02:06] HITS file was successfully produced:
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas 931327141 Nov 23 01:00 shared/HITS.pool.root.1
[2025-11-23 01:02:06]  *** Contents of shared directory: ***
[2025-11-23 01:02:06] total 1320192
[2025-11-23 01:02:06] -rw-r--r-- 2 boincer umatlas 411775701 Nov 22 12:35 ATLAS.root_0
[2025-11-23 01:02:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 12:35 start_atlas.sh
[2025-11-23 01:02:06] -rw-r--r-- 2 boincer umatlas    590097 Nov 22 12:35 input.tar.gz
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas 931327141 Nov 23 01:00 HITS.pool.root.1
[2025-11-23 01:02:06] -rw------- 1 boincer umatlas   8151040 Nov 23 01:02 result.tar.gz
01:02:07 (13853): run_atlas exited; CPU time 343774.079592
01:02:07 (13853): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN