Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:41:06 (31296): wrapper (7.7.26015): starting
11:41:06 (31296): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 11:41:06] Arguments: --nthreads 12
[2025-11-22 11:41:06] Threads: 12
[2025-11-22 11:41:06] Checking for CVMFS
[2025-11-22 11:41:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 11:41:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 11:41:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 11:41:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 11:41:06] 2.11.2.0 30551 112116 93200 153178 2 81 11295079 20275201 1 130560 0 49791009 99.914 6200835 28596 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 11:41:06] CVMFS is ok
[2025-11-22 11:41:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 11:41:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 11:41:06] Further information can be found at the LHC@home message board.
[2025-11-22 11:41:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 11:41:06] Checking for apptainer binary...
[2025-11-22 11:41:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 11:41:06] Running /usr/bin/apptainer --version
[2025-11-22 11:41:06] apptainer version 1.3.2-1.el7
[2025-11-22 11:41:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 11:41:08] c-205-16.aglt2.org
[2025-11-22 11:41:08] apptainer works
[2025-11-22 11:41:08] Set ATHENA_PROC_NUMBER=12
[2025-11-22 11:41:08] Set ATHENA_CORE_NUMBER=12
[2025-11-22 11:41:08] Starting ATLAS job with PandaID=6895328970
[2025-11-22 11:41:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 18:55:10]  *** The last 200 lines of the pilot log: ***
[2025-11-22 18:55:10] 2025-11-22 23:54:16,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 18:55:10] 2025-11-22 23:54:18,487 | INFO     | time since job start (25975s) is within the limit (172800.0s)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,494 | INFO     | monitor loop #1948: job 0:6895328970 is in state 'finished'
[2025-11-22 18:55:10] 2025-11-22 23:54:19,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,521 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 18:55:10] 2025-11-22 23:54:19,524 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-11-22 18:55:10] 2025-11-22 23:54:19,525 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895328970/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,526 | INFO     | extracted standard info from prmon json
[2025-11-22 18:55:10] 2025-11-22 23:54:19,526 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 18:55:10] 2025-11-22 23:54:19,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 18:55:10] 2025-11-22 23:54:19,533 | INFO     | fitting pss+swap vs Time
[2025-11-22 18:55:10] 2025-11-22 23:54:19,533 | INFO     | sum of square deviations: 23972071382.554073
[2025-11-22 18:55:10] 2025-11-22 23:54:19,537 | INFO     | sum of deviations: 352286942511.1262
[2025-11-22 18:55:10] 2025-11-22 23:54:19,538 | INFO     | mean x: 1763842675.7370892
[2025-11-22 18:55:10] 2025-11-22 23:54:19,538 | INFO     | mean y: 3430854.295774648
[2025-11-22 18:55:10] 2025-11-22 23:54:19,538 | INFO     | intersect: -25917514123.295017
[2025-11-22 18:55:10] 2025-11-22 23:54:19,538 | INFO     | chi2: 5.836130614363128
[2025-11-22 18:55:10] 2025-11-22 23:54:19,539 | INFO     | sum of square deviations: 23137881894.769714
[2025-11-22 18:55:10] 2025-11-22 23:54:19,543 | INFO     | sum of deviations: 519631637652.94574
[2025-11-22 18:55:10] 2025-11-22 23:54:19,543 | INFO     | mean x: 1763842523.2399049
[2025-11-22 18:55:10] 2025-11-22 23:54:19,543 | INFO     | mean y: 3461411.6342042754
[2025-11-22 18:55:10] 2025-11-22 23:54:19,543 | INFO     | intersect: -39608996767.6186
[2025-11-22 18:55:10] 2025-11-22 23:54:19,543 | INFO     | chi2: 2.642284478337172
[2025-11-22 18:55:10] 2025-11-22 23:54:19,544 | INFO     | current chi2=2.642284478337172 (change=54.725405359600344 %)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,544 | INFO     | sum of square deviations: 22323274169.478313
[2025-11-22 18:55:10] 2025-11-22 23:54:19,548 | INFO     | sum of deviations: 555285943856.9203
[2025-11-22 18:55:10] 2025-11-22 23:54:19,548 | INFO     | mean x: 1763842370.7427886
[2025-11-22 18:55:10] 2025-11-22 23:54:19,548 | INFO     | mean y: 3468045.2235576925
[2025-11-22 18:55:10] 2025-11-22 23:54:19,548 | INFO     | intersect: -43871676264.56057
[2025-11-22 18:55:10] 2025-11-22 23:54:19,549 | INFO     | chi2: 2.3004855304798815
[2025-11-22 18:55:10] 2025-11-22 23:54:19,549 | INFO     | current chi2=2.3004855304798815 (change=12.935736127564498 %)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,549 | INFO     | right removable region: 415
[2025-11-22 18:55:10] 2025-11-22 23:54:19,549 | INFO     | sum of square deviations: 23137820284.769714
[2025-11-22 18:55:10] 2025-11-22 23:54:19,553 | INFO     | sum of deviations: 222085293039.12106
[2025-11-22 18:55:10] 2025-11-22 23:54:19,553 | INFO     | mean x: 1763842828.2399049
[2025-11-22 18:55:10] 2025-11-22 23:54:19,553 | INFO     | mean y: 3454570.028503563
[2025-11-22 18:55:10] 2025-11-22 23:54:19,553 | INFO     | intersect: -16926556406.090118
[2025-11-22 18:55:10] 2025-11-22 23:54:19,554 | INFO     | chi2: 3.6936297869920582
[2025-11-22 18:55:10] 2025-11-22 23:54:19,554 | INFO     | current chi2=3.6936297869920582 (change=36.71098145230377 %)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,554 | INFO     | sum of square deviations: 22323150949.478302
[2025-11-22 18:55:10] 2025-11-22 23:54:19,558 | INFO     | sum of deviations: 189136675036.7475
[2025-11-22 18:55:10] 2025-11-22 23:54:19,558 | INFO     | mean x: 1763842980.7427886
[2025-11-22 18:55:10] 2025-11-22 23:54:19,558 | INFO     | mean y: 3460731.1658653845
[2025-11-22 18:55:10] 2025-11-22 23:54:19,558 | INFO     | intersect: -14940997487.103424
[2025-11-22 18:55:10] 2025-11-22 23:54:19,559 | INFO     | chi2: 3.6375407077275788
[2025-11-22 18:55:10] 2025-11-22 23:54:19,559 | INFO     | current chi2=3.6375407077275788 (change=1.5185354921603051 %)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,559 | INFO     | left removable region: 20
[2025-11-22 18:55:10] 2025-11-22 23:54:19,560 | INFO     | sum of square deviations: 19110309921.179672
[2025-11-22 18:55:10] 2025-11-22 23:54:19,563 | INFO     | sum of deviations: 350721080488.3775
[2025-11-22 18:55:10] 2025-11-22 23:54:19,563 | INFO     | mean x: 1763842950.2455697
[2025-11-22 18:55:10] 2025-11-22 23:54:19,563 | INFO     | mean y: 3507017.501265823
[2025-11-22 18:55:10] 2025-11-22 23:54:19,563 | INFO     | intersect: -32367339288.676624
[2025-11-22 18:55:10] 2025-11-22 23:54:19,564 | INFO     | chi2: 0.05101282045570831
[2025-11-22 18:55:10] 2025-11-22 23:54:19,564 | INFO     | current memory leak: 18.35 B/s (using 395 data points, chi2=0.05)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,564 | INFO     | could have reported an average CPU frequency of 2411 MHz (18 samples)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,565 | INFO     | ..............................
[2025-11-22 18:55:10] 2025-11-22 23:54:19,565 | INFO     | . Timing measurements:
[2025-11-22 18:55:10] 2025-11-22 23:54:19,565 | INFO     | . get job = 0 s
[2025-11-22 18:55:10] 2025-11-22 23:54:19,565 | INFO     | . initial setup = 2 s
[2025-11-22 18:55:10] 2025-11-22 23:54:19,565 | INFO     | . payload setup = 7 s
[2025-11-22 18:55:10] 2025-11-22 23:54:19,565 | INFO     | . stage-in = 0 s
[2025-11-22 18:55:10] 2025-11-22 23:54:19,565 | INFO     | . payload execution = 25935 s
[2025-11-22 18:55:10] 2025-11-22 23:54:19,565 | INFO     | . stage-out = 3 s
[2025-11-22 18:55:10] 2025-11-22 23:54:19,565 | INFO     | . log creation = 0 s
[2025-11-22 18:55:10] 2025-11-22 23:54:19,565 | INFO     | ..............................
[2025-11-22 18:55:10] 2025-11-22 23:54:19,646 | INFO     | 
[2025-11-22 18:55:10] 2025-11-22 23:54:19,646 | INFO     | job summary report
[2025-11-22 18:55:10] 2025-11-22 23:54:19,646 | INFO     | --------------------------------------------------
[2025-11-22 18:55:10] 2025-11-22 23:54:19,646 | INFO     | PanDA job id: 6895328970
[2025-11-22 18:55:10] 2025-11-22 23:54:19,646 | INFO     | task id: 47556137
[2025-11-22 18:55:10] 2025-11-22 23:54:19,646 | INFO     | errors: (none)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,647 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 18:55:10] 2025-11-22 23:54:19,647 | INFO     | pilot state: finished 
[2025-11-22 18:55:10] 2025-11-22 23:54:19,647 | INFO     | transexitcode: 0
[2025-11-22 18:55:10] 2025-11-22 23:54:19,647 | INFO     | exeerrorcode: 0
[2025-11-22 18:55:10] 2025-11-22 23:54:19,647 | INFO     | exeerrordiag: 
[2025-11-22 18:55:10] 2025-11-22 23:54:19,647 | INFO     | exitcode: 0
[2025-11-22 18:55:10] 2025-11-22 23:54:19,648 | INFO     | exitmsg: OK
[2025-11-22 18:55:10] 2025-11-22 23:54:19,648 | INFO     | cpuconsumptiontime: 297918 s
[2025-11-22 18:55:10] 2025-11-22 23:54:19,648 | INFO     | nevents: 1000
[2025-11-22 18:55:10] 2025-11-22 23:54:19,648 | INFO     | neventsw: 0
[2025-11-22 18:55:10] 2025-11-22 23:54:19,648 | INFO     | pid: 9080
[2025-11-22 18:55:10] 2025-11-22 23:54:19,648 | INFO     | pgrp: 9080
[2025-11-22 18:55:10] 2025-11-22 23:54:19,649 | INFO     | corecount: 12
[2025-11-22 18:55:10] 2025-11-22 23:54:19,649 | INFO     | event service: False
[2025-11-22 18:55:10] 2025-11-22 23:54:19,649 | INFO     | sizes: {0: 2298803, 5: 2299065, 11: 2299121, 25946: 2336412, 25947: 2336411, 25952: 2345645, 25960: 2345835}
[2025-11-22 18:55:10] 2025-11-22 23:54:19,649 | INFO     | --------------------------------------------------
[2025-11-22 18:55:10] 2025-11-22 23:54:19,649 | INFO     | 
[2025-11-22 18:55:10] 2025-11-22 23:54:19,649 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 18:55:10] 2025-11-22 23:54:19,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,674 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,674 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,677 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,677 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 18:55:10] 2025-11-22 23:54:19,677 | INFO     | job 6895328970 has completed (purged errors)
[2025-11-22 18:55:10] 2025-11-22 23:54:19,677 | INFO     | overall cleanup function is called
[2025-11-22 18:55:10] 2025-11-22 23:54:20,693 | INFO     | --- collectZombieJob: --- 10, [9080]
[2025-11-22 18:55:10] 2025-11-22 23:54:20,693 | INFO     | zombie collector waiting for pid 9080
[2025-11-22 18:55:10] 2025-11-22 23:54:20,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 18:55:10] 2025-11-22 23:54:20,693 | INFO     | collected zombie processes
[2025-11-22 18:55:10] 2025-11-22 23:54:20,694 | INFO     | will attempt to kill all subprocesses of pid=9080
[2025-11-22 18:55:10] 2025-11-22 23:54:20,789 | INFO     | process IDs to be killed: [9080] (in reverse order)
[2025-11-22 18:55:10] 2025-11-22 23:54:20,842 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 18:55:10] 2025-11-22 23:54:20,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 18:55:10] 2025-11-22 23:54:20,846 | INFO     | did not find any defunct processes belonging to 9080
[2025-11-22 18:55:10] 2025-11-22 23:54:20,849 | INFO     | did not find any defunct processes belonging to 9080
[2025-11-22 18:55:10] 2025-11-22 23:54:20,852 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 18:55:10] 2025-11-22 23:54:20,852 | INFO     | ready for new job
[2025-11-22 18:55:10] 2025-11-22 23:54:20,852 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 18:55:10] 2025-11-22 23:54:20,854 | INFO     | ***************************************
[2025-11-22 18:55:10] 2025-11-22 23:54:20,854 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 18:55:10] 2025-11-22 23:54:20,855 | INFO     | ***************************************
[2025-11-22 18:55:10] 2025-11-22 23:54:20,855 | INFO     | 
[2025-11-22 18:55:10] 2025-11-22 23:54:20,855 | INFO     | architecture information:
[2025-11-22 18:55:10] 2025-11-22 23:54:20,856 | INFO     | executing command: cat /etc/os-release
[2025-11-22 18:55:10] 2025-11-22 23:54:20,871 | INFO     | cat /etc/os-release:
[2025-11-22 18:55:10] NAME="CentOS Linux"
[2025-11-22 18:55:10] VERSION="7 (Core)"
[2025-11-22 18:55:10] ID="centos"
[2025-11-22 18:55:10] ID_LIKE="rhel fedora"
[2025-11-22 18:55:10] VERSION_ID="7"
[2025-11-22 18:55:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 18:55:10] ANSI_COLOR="0;31"
[2025-11-22 18:55:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 18:55:10] HOME_URL="https://www.centos.org/"
[2025-11-22 18:55:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 18:55:10] 
[2025-11-22 18:55:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 18:55:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 18:55:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 18:55:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 18:55:10] 
[2025-11-22 18:55:10] 2025-11-22 23:54:20,871 | INFO     | ***************************************
[2025-11-22 18:55:10] 2025-11-22 23:54:21,374 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 18:55:10] 2025-11-22 23:54:21,453 | INFO     | sufficient remaining disk space (28390195200 B)
[2025-11-22 18:55:10] 2025-11-22 23:54:21,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 18:55:10] 2025-11-22 23:54:21,453 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 18:55:10] 2025-11-22 23:54:21,453 | INFO     | update_server=False
[2025-11-22 18:55:10] 2025-11-22 23:54:21,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 18:55:10] 2025-11-22 23:54:21,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:55:10] 2025-11-22 23:54:21,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:55:10] 2025-11-22 23:54:21,454 | INFO     | aborting loop
[2025-11-22 18:55:10] 2025-11-22 23:54:21,774 | INFO     | all payload control threads have been joined
[2025-11-22 18:55:10] 2025-11-22 23:54:21,889 | INFO     | all data control threads have been joined
[2025-11-22 18:55:10] 2025-11-22 23:54:21,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 18:55:10] 2025-11-22 23:54:22,141 | INFO     | all job control threads have been joined
[2025-11-22 18:55:10] 2025-11-22 23:54:22,459 | INFO     | [job] retrieve thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:22,460 | INFO     | [job] queue monitor thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:22,461 | INFO     | [job] job monitor thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:22,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 18:55:10] 2025-11-22 23:54:22,779 | INFO     | [payload] control thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:22,895 | INFO     | [data] control thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:23,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:23,146 | INFO     | [job] control thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:23,258 | INFO     | [data] copytool_in thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:23,446 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:23,446 | INFO     | [job] validate thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:23,503 | INFO     | [payload] failed_post thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:23,870 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:23,897 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:23,919 | INFO     | [data] copytool_out thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:24,004 | INFO     | [payload] validate_post thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:26,647 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 18:55:10] 2025-11-22 23:54:51,691 | INFO     | PID=2699 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 18:55:10] 2025-11-22 23:54:51,691 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 18:55:10] 2025-11-22 23:54:51,691 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 18:55:10] 2025-11-22 23:54:51,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 18:55:10] 2025-11-22 23:55:05,589 | INFO     | [monitor] cgroup control has ended
[2025-11-22 18:55:10] 2025-11-22 23:55:05,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699517781824)>', '<ExcThread(monitor, started 139698626352896)>']
[2025-11-22 18:55:10] 2025-11-22 23:55:05,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 18:55:10] 2025-11-22 23:55:05,762 | INFO     | [monitor] control thread has ended
[2025-11-22 18:55:10] 2025-11-22 23:55:10,670 | INFO     | all workflow threads have been joined
[2025-11-22 18:55:10] 2025-11-22 23:55:10,671 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 18:55:10] 2025-11-22 23:55:10,671 | INFO     | traces error code: 0
[2025-11-22 18:55:10] 2025-11-22 23:55:10,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 18:55:10] 2025-11-22 23:55:10,755 [wrapper] ==== pilot stdout END ====
[2025-11-22 18:55:10] 2025-11-22 23:55:10,758 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 18:55:10] 2025-11-22 23:55:10,762 [wrapper] pilotpid: 2699
[2025-11-22 18:55:10] 2025-11-22 23:55:10,766 [wrapper] Pilot exit status: 0
[2025-11-22 18:55:10] 2025-11-22 23:55:10,780 [wrapper] pandaids: 6895328970
[2025-11-22 18:55:10] 2025-11-22 23:55:10,826 [wrapper] cleanup supervisor_pilot  7346 2700
[2025-11-22 18:55:10] 2025-11-22 23:55:10,829 [wrapper] Test setup, not cleaning
[2025-11-22 18:55:10] 2025-11-22 23:55:10,833 [wrapper] apfmon messages muted
[2025-11-22 18:55:10] 2025-11-22 23:55:10,837 [wrapper] ==== wrapper stdout END ====
[2025-11-22 18:55:10] 2025-11-22 23:55:10,841 [wrapper] ==== wrapper stderr END ====
[2025-11-22 18:55:10]  *** Error codes and diagnostics ***
[2025-11-22 18:55:10]     "exeErrorCode": 0,
[2025-11-22 18:55:10]     "exeErrorDiag": "",
[2025-11-22 18:55:10]     "pilotErrorCode": 0,
[2025-11-22 18:55:10]     "pilotErrorDiag": "",
[2025-11-22 18:55:10]  *** Listing of results directory ***
[2025-11-22 18:55:10] total 1307696
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 13:11 pilot3.tar.gz
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 13:25 queuedata.json
[2025-11-22 18:55:10] -rwx------ 1 boincer umatlas     36292 Nov 21 13:26 runpilot2-wrapper.sh
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas       100 Nov 22 11:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 18:55:10] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 11:41 run_atlas
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas       105 Nov 22 11:41 job.xml
[2025-11-22 18:55:10] -rw-r--r-- 2 boincer umatlas 410505467 Nov 22 11:41 EVNT.47483658._000099.pool.root.1
[2025-11-22 18:55:10] drwxrwx--x 2 boincer umatlas      4096 Nov 22 11:41 shared
[2025-11-22 18:55:10] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 11:41 input.tar.gz
[2025-11-22 18:55:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 11:41 start_atlas.sh
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas         0 Nov 22 11:41 boinc_lockfile
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 11:41 pandaJob.out
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas        57 Nov 22 11:41 setup.sh.local
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas    989768 Nov 22 11:41 agis_schedconf.cvmfs.json
[2025-11-22 18:55:10] drwx------ 5 boincer umatlas      4096 Nov 22 11:41 pilot3
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas       532 Nov 22 18:44 boinc_task_state.xml
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas 913058055 Nov 22 18:53 HITS.47556137._000989.pool.root.1
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas      1064 Nov 22 18:54 memory_monitor_summary.json
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas   1526164 Nov 22 18:54 agis_ddmendpoints.agis.ALL.json
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas   2170239 Nov 22 18:54 log.47556137._000989.job.log.tgz.1
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas      8662 Nov 22 18:54 heartbeat.json
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas      5956 Nov 22 18:54 init_data.xml
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas        95 Nov 22 18:54 pilot_heartbeat.json
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 18:55 boinc_mmap_file
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas        29 Nov 22 18:55 wrapper_checkpoint.txt
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas      4745 Nov 22 18:55 pilotlog.txt
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas   3628523 Nov 22 18:55 log.47556137._000989.job.log.1
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas       353 Nov 22 18:55 output.list
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas       620 Nov 22 18:55 runtime_log
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas   5816320 Nov 22 18:55 result.tar.gz
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 18:55 runtime_log.err
[2025-11-22 18:55:10] -rw------- 1 boincer umatlas       670 Nov 22 18:55 klnNDmm0kg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2cJKDmaB18hm.diag
[2025-11-22 18:55:10] -rw-r--r-- 1 boincer umatlas     21339 Nov 22 18:55 stderr.txt
[2025-11-22 18:55:11] HITS file was successfully produced:
[2025-11-22 18:55:11] -rw------- 1 boincer umatlas 913058055 Nov 22 18:53 shared/HITS.pool.root.1
[2025-11-22 18:55:11]  *** Contents of shared directory: ***
[2025-11-22 18:55:11] total 1298828
[2025-11-22 18:55:11] -rw-r--r-- 2 boincer umatlas 410505467 Nov 22 11:41 ATLAS.root_0
[2025-11-22 18:55:11] -rw-r--r-- 2 boincer umatlas    590100 Nov 22 11:41 input.tar.gz
[2025-11-22 18:55:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 11:41 start_atlas.sh
[2025-11-22 18:55:11] -rw------- 1 boincer umatlas 913058055 Nov 22 18:53 HITS.pool.root.1
[2025-11-22 18:55:11] -rw------- 1 boincer umatlas   5816320 Nov 22 18:55 result.tar.gz
18:55:12 (31296): run_atlas exited; CPU time 291169.848172
18:55:12 (31296): called boinc_finish(0)

</stderr_txt>
]]>

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