Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:56:27 (4169493): wrapper (7.7.26015): starting
08:56:27 (4169493): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 08:56:27] Arguments: --nthreads 12
[2025-11-22 08:56:27] Threads: 12
[2025-11-22 08:56:27] Checking for CVMFS
[2025-11-22 08:56:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 08:56:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 08:56:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 08:56:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 08:56:27] 2.11.3.0 2224448 22872 227188 153178 1 440 44626623 45568001 16392 130560 0 245232180 99.816 132390688 23434 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-22 08:56:27] CVMFS is ok
[2025-11-22 08:56:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 08:56:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 08:56:27] Further information can be found at the LHC@home message board.
[2025-11-22 08:56:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 08:56:27] Checking for apptainer binary...
[2025-11-22 08:56:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 08:56:27] Running /usr/bin/apptainer --version
[2025-11-22 08:56:27] apptainer version 1.4.1-1.el9
[2025-11-22 08:56:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 08:56:27] wns0170.triumf.lcg
[2025-11-22 08:56:27] apptainer works
[2025-11-22 08:56:27] Set ATHENA_PROC_NUMBER=12
[2025-11-22 08:56:27] Set ATHENA_CORE_NUMBER=12
[2025-11-22 08:56:27] Starting ATLAS job with PandaID=6894238059
[2025-11-22 08:56:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 09:00:40]  *** The last 200 lines of the pilot log: ***
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | INFO     | will not add max space = 0 B to job metrics
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | WARNING  | wrong length of table data, x=[1763830616.0], y=[1204.0] (must be same and length>=4)
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | could have reported an average CPU frequency of 2853 MHz (4 samples)
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | ..............................
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . Timing measurements:
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . get job = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . initial setup = 2 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . payload setup = 3 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . stage-in = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . payload execution = 43 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . stage-out = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | . log creation = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | ..............................
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894238059/pilotlog.txt
[2025-11-22 09:00:40] 2025-11-22 16:59:44,249 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-22 09:00:40] - Log from pilotlog.txt -
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | WARNING  | found no stored workdir sizes
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | INFO     | will not add max space = 0 B to job metrics
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | WARNING  | wrong length of table data, x=[1763830616.0], y=[1204.0] (must be same and length>=4)
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | could have reported an average CPU frequency of 2853 MHz (4 samples)
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | ..............................
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . Timing measurements:
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . get job = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . initial setup = 2 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . payload setup = 3 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . stage-in = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . payload execution = 43 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . stage-out = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | . log creation = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | ..............................
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894238059/pilotlog.txt
[2025-11-22 09:00:40] 2025-11-22 16:59:44,249 | WARNING  | 
[2025-11-22 09:00:40] [begin log extracts]
[2025-11-22 09:00:40] - Log from pilotlog.txt -
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | WARNING  | found no stored workdir sizes
[2025-11-22 09:00:40] 2025-11-22 16:59:44,239 | INFO     | will not add max space = 0 B to job metrics
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | WARNING  | wrong length of table data, x=[1763830616.0], y=[1204.0] (must be same and length>=4)
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | could have reported an average CPU frequency of 2853 MHz (4 samples)
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | ..............................
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . Timing measurements:
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . get job = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . initial setup = 2 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . payload setup = 3 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . stage-in = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . payload execution = 43 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,240 | INFO     | . stage-out = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | . log creation = 0 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | ..............................
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 09:00:40] 2025-11-22 16:59:44,241 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894238059/pilotlog.txt
[2025-11-22 09:00:40] [end log extracts]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,249 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-22 09:00:40] 2025-11-22 16:59:44,250 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | 
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | job summary report
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | --------------------------------------------------
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | PanDA job id: 6894238059
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | task id: 47533967
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-22 08:57:32,693 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | pilot state: failed 
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | transexitcode: 65
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | exeerrorcode: 65
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | exitcode: 65
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | cpuconsumptiontime: 36 s
[2025-11-22 09:00:40] 2025-11-22 16:59:44,300 | INFO     | nevents: 0
[2025-11-22 09:00:40] 2025-11-22 16:59:44,301 | INFO     | neventsw: 0
[2025-11-22 09:00:40] 2025-11-22 16:59:44,301 | INFO     | pid: 4179729
[2025-11-22 09:00:40] 2025-11-22 16:59:44,301 | INFO     | pgrp: 4179729
[2025-11-22 09:00:40] 2025-11-22 16:59:44,301 | INFO     | corecount: 12
[2025-11-22 09:00:40] 2025-11-22 16:59:44,301 | INFO     | event service: False
[2025-11-22 09:00:40] 2025-11-22 16:59:44,301 | INFO     | sizes: {0: 2298801, 3: 2299063, 11: 2299091, 51: 2324535, 53: 2328825, 56: 2328853, 176: 2329147}
[2025-11-22 09:00:40] 2025-11-22 16:59:44,301 | INFO     | --------------------------------------------------
[2025-11-22 09:00:40] 2025-11-22 16:59:44,301 | INFO     | 
[2025-11-22 09:00:40] 2025-11-22 16:59:44,301 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-22 09:00:40] 2025-11-22 16:59:44,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 09:00:40] 2025-11-22 16:59:44,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 09:00:40] 2025-11-22 16:59:44,314 | INFO     | job 6894238059 has completed (purged errors)
[2025-11-22 09:00:40] 2025-11-22 16:59:44,314 | INFO     | overall cleanup function is called
[2025-11-22 09:00:40] 2025-11-22 16:59:45,322 | INFO     | --- collectZombieJob: --- 10, [4179729]
[2025-11-22 09:00:40] 2025-11-22 16:59:45,322 | INFO     | zombie collector waiting for pid 4179729
[2025-11-22 09:00:40] 2025-11-22 16:59:45,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 09:00:40] 2025-11-22 16:59:45,322 | INFO     | collected zombie processes
[2025-11-22 09:00:40] 2025-11-22 16:59:45,322 | INFO     | will attempt to kill all subprocesses of pid=4179729
[2025-11-22 09:00:40] 2025-11-22 16:59:45,459 | INFO     | process IDs to be killed: [4179729] (in reverse order)
[2025-11-22 09:00:40] 2025-11-22 16:59:45,506 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 09:00:40] 2025-11-22 16:59:45,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 09:00:40] 2025-11-22 16:59:45,512 | INFO     | did not find any defunct processes belonging to 4179729
[2025-11-22 09:00:40] 2025-11-22 16:59:45,517 | INFO     | did not find any defunct processes belonging to 4179729
[2025-11-22 09:00:40] 2025-11-22 16:59:45,518 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 09:00:40] 2025-11-22 16:59:45,518 | INFO     | ready for new job
[2025-11-22 09:00:40] 2025-11-22 16:59:45,518 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 09:00:40] 2025-11-22 16:59:45,519 | INFO     | ***************************************
[2025-11-22 09:00:40] 2025-11-22 16:59:45,519 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 09:00:40] 2025-11-22 16:59:45,519 | INFO     | ***************************************
[2025-11-22 09:00:40] 2025-11-22 16:59:45,519 | INFO     | 
[2025-11-22 09:00:40] 2025-11-22 16:59:45,521 | INFO     | architecture information:
[2025-11-22 09:00:40] 2025-11-22 16:59:45,521 | INFO     | executing command: cat /etc/os-release
[2025-11-22 09:00:40] 2025-11-22 16:59:45,529 | INFO     | cat /etc/os-release:
[2025-11-22 09:00:40] NAME="CentOS Linux"
[2025-11-22 09:00:40] VERSION="7 (Core)"
[2025-11-22 09:00:40] ID="centos"
[2025-11-22 09:00:40] ID_LIKE="rhel fedora"
[2025-11-22 09:00:40] VERSION_ID="7"
[2025-11-22 09:00:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 09:00:40] ANSI_COLOR="0;31"
[2025-11-22 09:00:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 09:00:40] HOME_URL="https://www.centos.org/"
[2025-11-22 09:00:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 09:00:40] 
[2025-11-22 09:00:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 09:00:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 09:00:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 09:00:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 09:00:40] 
[2025-11-22 09:00:40] 2025-11-22 16:59:45,530 | INFO     | ***************************************
[2025-11-22 09:00:40] 2025-11-22 16:59:46,033 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-22 09:00:40] 2025-11-22 16:59:46,045 | INFO     | sufficient remaining disk space (2228869922816 B)
[2025-11-22 09:00:40] 2025-11-22 16:59:46,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 09:00:40] 2025-11-22 16:59:46,045 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 09:00:40] 2025-11-22 16:59:46,045 | INFO     | update_server=False
[2025-11-22 09:00:40] 2025-11-22 16:59:46,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 09:00:40] 2025-11-22 16:59:46,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 09:00:40] 2025-11-22 16:59:46,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 09:00:40] 2025-11-22 16:59:46,353 | INFO     | aborting loop
[2025-11-22 09:00:40] 2025-11-22 16:59:46,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 09:00:40] 2025-11-22 16:59:46,823 | INFO     | all data control threads have been joined
[2025-11-22 09:00:40] 2025-11-22 16:59:47,050 | INFO     | [job] queue monitor thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:47,050 | INFO     | [job] retrieve thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:47,179 | INFO     | [payload] failed_post thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:47,359 | INFO     | [job] job monitor thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:47,470 | INFO     | all payload control threads have been joined
[2025-11-22 09:00:40] 2025-11-22 16:59:47,540 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 09:00:40] 2025-11-22 16:59:47,691 | INFO     | all job control threads have been joined
[2025-11-22 09:00:40] 2025-11-22 16:59:47,714 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:47,754 | INFO     | [payload] validate_post thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:47,829 | INFO     | [data] control thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:48,092 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:48,295 | INFO     | [data] copytool_in thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:48,323 | INFO     | [job] validate thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:48,426 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:48,476 | INFO     | [payload] control thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:48,493 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:48,696 | INFO     | [job] control thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:48,810 | INFO     | [data] copytool_out thread has finished
[2025-11-22 09:00:40] 2025-11-22 16:59:51,545 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 09:00:40] 2025-11-22 17:00:16,497 | INFO     | PID=4173155 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 09:00:40] 2025-11-22 17:00:16,497 | INFO     | .. there are 21 such processes running
[2025-11-22 09:00:40] 2025-11-22 17:00:16,497 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 09:00:40] 2025-11-22 17:00:16,497 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 09:00:40] 2025-11-22 17:00:16,497 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 09:00:40] 2025-11-22 17:00:34,647 | INFO     | [monitor] cgroup control has ended
[2025-11-22 09:00:40] 2025-11-22 17:00:35,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725922756416)>', '<ExcThread(monitor, started 139725369218816)>']
[2025-11-22 09:00:40] 2025-11-22 17:00:35,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 09:00:40] 2025-11-22 17:00:35,591 | INFO     | [monitor] control thread has ended
[2025-11-22 09:00:40] 2025-11-22 17:00:40,580 | INFO     | all workflow threads have been joined
[2025-11-22 09:00:40] 2025-11-22 17:00:40,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 09:00:40] 2025-11-22 17:00:40,580 | INFO     | traces error code: 0
[2025-11-22 09:00:40] 2025-11-22 17:00:40,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 09:00:40] 2025-11-22 17:00:40,738 [wrapper] ==== pilot stdout END ====
[2025-11-22 09:00:40] 2025-11-22 17:00:40,740 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 09:00:40] 2025-11-22 17:00:40,742 [wrapper] pilotpid: 4173155
[2025-11-22 09:00:40] 2025-11-22 17:00:40,745 [wrapper] Pilot exit status: 0
[2025-11-22 09:00:40] 2025-11-22 17:00:40,757 [wrapper] pandaids: 6894238059
[2025-11-22 09:00:40] 2025-11-22 17:00:40,790 [wrapper] cleanup supervisor_pilot 4173161 4173156
[2025-11-22 09:00:40] 2025-11-22 17:00:40,792 [wrapper] Test setup, not cleaning
[2025-11-22 09:00:40] 2025-11-22 17:00:40,793 [wrapper] apfmon messages muted
[2025-11-22 09:00:40] 2025-11-22 17:00:40,795 [wrapper] ==== wrapper stdout END ====
[2025-11-22 09:00:40] 2025-11-22 17:00:40,797 [wrapper] ==== wrapper stderr END ====
[2025-11-22 09:00:40]  *** Error codes and diagnostics ***
[2025-11-22 09:00:40]     "exeErrorCode": 65,
[2025-11-22 09:00:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-22 09:00:40]     "pilotErrorCode": 1305,
[2025-11-22 09:00:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-22 09:00:40]  *** Listing of results directory ***
[2025-11-22 09:00:40] total 405152
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc    576529 Nov 20 16:06 pilot3.tar.gz
[2025-11-22 09:00:40] -rwx------. 1 boinc boinc     36292 Nov 20 16:19 runpilot2-wrapper.sh
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc      5112 Nov 20 16:19 queuedata.json
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc       100 Nov 22 08:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 09:00:40] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 08:56 run_atlas
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc       105 Nov 22 08:56 job.xml
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc      6628 Nov 22 08:56 init_data.xml
[2025-11-22 09:00:40] -rw-r--r--. 2 boinc boinc 410675667 Nov 22 08:56 EVNT.47493127._002043.pool.root.1
[2025-11-22 09:00:40] -rw-r--r--. 2 boinc boinc     15847 Nov 22 08:56 start_atlas.sh
[2025-11-22 09:00:40] drwxrwx--x. 2 boinc boinc      4096 Nov 22 08:56 shared
[2025-11-22 09:00:40] -rw-r--r--. 2 boinc boinc    590098 Nov 22 08:56 input.tar.gz
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc         0 Nov 22 08:56 boinc_lockfile
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc      2784 Nov 22 08:56 pandaJob.out
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc    989768 Nov 22 08:56 agis_schedconf.cvmfs.json
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc   1526164 Nov 22 08:56 agis_ddmendpoints.agis.ALL.json
[2025-11-22 09:00:40] drwx------. 5 boinc boinc      4096 Nov 22 08:56 pilot3
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc       523 Nov 22 08:57 boinc_task_state.xml
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc       980 Nov 22 08:57 memory_monitor_summary.json
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc     47077 Nov 22 08:57 log.47533967._000144.job.log.tgz.1
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc        95 Nov 22 08:59 pilot_heartbeat.json
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc     10301 Nov 22 08:59 heartbeat.json
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc        23 Nov 22 09:00 wrapper_checkpoint.txt
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc      8192 Nov 22 09:00 boinc_mmap_file
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc      4823 Nov 22 09:00 pilotlog.txt
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc     91099 Nov 22 09:00 log.47533967._000144.job.log.1
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc       186 Nov 22 09:00 output.list
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc       620 Nov 22 09:00 runtime_log
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc    163840 Nov 22 09:00 result.tar.gz
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc      8636 Nov 22 09:00 runtime_log.err
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc       645 Nov 22 09:00 5DdNDmJ3Tg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHjIKDm8WtJOo.diag
[2025-11-22 09:00:40] -rw-r--r--. 1 boinc boinc     22264 Nov 22 09:00 stderr.txt
[2025-11-22 09:00:40] No HITS result produced
[2025-11-22 09:00:40]  *** Contents of shared directory: ***
[2025-11-22 09:00:40] total 401812
[2025-11-22 09:00:40] -rw-r--r--. 2 boinc boinc 410675667 Nov 22 08:56 ATLAS.root_0
[2025-11-22 09:00:40] -rw-r--r--. 2 boinc boinc     15847 Nov 22 08:56 start_atlas.sh
[2025-11-22 09:00:40] -rw-r--r--. 2 boinc boinc    590098 Nov 22 08:56 input.tar.gz
[2025-11-22 09:00:40] -rw-------. 1 boinc boinc    163840 Nov 22 09:00 result.tar.gz
09:00:41 (4169493): run_atlas exited; CPU time 35.575215
09:00:41 (4169493): called boinc_finish(0)

</stderr_txt>
]]>

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