Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:07:40 (22785): wrapper (7.7.26015): starting
08:07:40 (22785): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 08:07:41] Arguments: --nthreads 8
[2025-11-25 08:07:41] Threads: 8
[2025-11-25 08:07:41] Checking for CVMFS
[2025-11-25 08:07:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:07:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:07:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:07:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:07:43] 2.11.2.0 2946 283543 140636 153273 2 85 13413242 25165824 4632 130560 11 134588606 99.887 78270987 2776 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 08:07:43] CVMFS is ok
[2025-11-25 08:07:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:07:43] Checking for apptainer binary...
[2025-11-25 08:07:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:07:43] Running /usr/bin/apptainer --version
[2025-11-25 08:07:44] apptainer version 1.3.2-1.el7
[2025-11-25 08:07:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:07:56] cg-vwn485.simple-grid.lan
[2025-11-25 08:07:56] apptainer works
[2025-11-25 08:07:56] Set ATHENA_PROC_NUMBER=8
[2025-11-25 08:07:56] Set ATHENA_CORE_NUMBER=8
[2025-11-25 08:07:56] Starting ATLAS job with PandaID=6895329011
[2025-11-25 08:07:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:23:11]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:23:11] 2025-11-26 06:22:14,446 | INFO     | monitor loop #5650: job 0:6895329011 is in state 'finished'
[2025-11-26 07:23:11] 2025-11-26 06:22:14,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:23:11] 2025-11-26 06:22:14,521 | INFO     | time since job start (83438s) is within the limit (172800.0s)
[2025-11-26 07:23:11] 2025-11-26 06:22:16,537 | INFO     | time since job start (83440s) is within the limit (172800.0s)
[2025-11-26 07:23:11] 2025-11-26 06:22:16,954 | INFO     | monitor loop #5651: job 0:6895329011 is in state 'finished'
[2025-11-26 07:23:11] 2025-11-26 06:22:16,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:23:11] 2025-11-26 06:22:18,542 | INFO     | time since job start (83442s) is within the limit (172800.0s)
[2025-11-26 07:23:11] 2025-11-26 06:22:19,465 | INFO     | monitor loop #5652: job 0:6895329011 is in state 'finished'
[2025-11-26 07:23:11] 2025-11-26 06:22:19,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:23:11] 2025-11-26 06:22:19,731 | INFO     | PID=26673 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 07:23:11] 2025-11-26 06:22:19,731 | INFO     | .. there are 9 such processes running
[2025-11-26 07:23:11] 2025-11-26 06:22:20,733 | INFO     | time since job start (83444s) is within the limit (172800.0s)
[2025-11-26 07:23:11] 2025-11-26 06:22:21,970 | INFO     | monitor loop #5653: job 0:6895329011 is in state 'finished'
[2025-11-26 07:23:11] 2025-11-26 06:22:21,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:23:11] 2025-11-26 06:22:22,743 | INFO     | time since job start (83446s) is within the limit (172800.0s)
[2025-11-26 07:23:11] 2025-11-26 06:22:23,651 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 07:23:11] 2025-11-26 06:22:23,654 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-26 07:23:11] 2025-11-26 06:22:23,656 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6895329011/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:23:11] 2025-11-26 06:22:23,657 | INFO     | extracted standard info from prmon json
[2025-11-26 07:23:11] 2025-11-26 06:22:23,657 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:23:11] 2025-11-26 06:22:23,657 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:23:11] 2025-11-26 06:22:23,698 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:23:11] 2025-11-26 06:22:23,700 | INFO     | sum of square deviations: 776562924449.3372
[2025-11-26 07:23:11] 2025-11-26 06:22:23,774 | INFO     | sum of deviations: 2857221986079.6777
[2025-11-26 07:23:11] 2025-11-26 06:22:23,775 | INFO     | mean x: 1764096618.6921945
[2025-11-26 07:23:11] 2025-11-26 06:22:23,775 | INFO     | mean y: 2828721.8365243003
[2025-11-26 07:23:11] 2025-11-26 06:22:23,775 | INFO     | intersect: -6487843811.97048
[2025-11-26 07:23:11] 2025-11-26 06:22:23,777 | INFO     | chi2: 26.920679748565075
[2025-11-26 07:23:11] 2025-11-26 06:22:23,778 | INFO     | sum of square deviations: 768017295209.7042
[2025-11-26 07:23:11] 2025-11-26 06:22:23,832 | INFO     | sum of deviations: 3318174028596.787
[2025-11-26 07:23:11] 2025-11-26 06:22:23,832 | INFO     | mean x: 1764096466.1966002
[2025-11-26 07:23:11] 2025-11-26 06:22:23,832 | INFO     | mean y: 2836946.779009608
[2025-11-26 07:23:11] 2025-11-26 06:22:23,832 | INFO     | intersect: -7618839172.473787
[2025-11-26 07:23:11] 2025-11-26 06:22:23,834 | INFO     | chi2: 23.513962337803285
[2025-11-26 07:23:11] 2025-11-26 06:22:23,834 | INFO     | current chi2=23.513962337803285 (change=12.654648554865611 %)
[2025-11-26 07:23:11] 2025-11-26 06:22:23,834 | INFO     | right removable region: 1352
[2025-11-26 07:23:11] 2025-11-26 06:22:23,836 | INFO     | sum of square deviations: 768016307619.7047
[2025-11-26 07:23:11] 2025-11-26 06:22:23,908 | INFO     | sum of deviations: 2286411843572.9014
[2025-11-26 07:23:11] 2025-11-26 06:22:23,909 | INFO     | mean x: 1764096771.1966002
[2025-11-26 07:23:11] 2025-11-26 06:22:23,909 | INFO     | mean y: 2838906.7184035475
[2025-11-26 07:23:11] 2025-11-26 06:22:23,909 | INFO     | intersect: -5248939878.257406
[2025-11-26 07:23:11] 2025-11-26 06:22:23,911 | INFO     | chi2: 22.126186893461206
[2025-11-26 07:23:11] 2025-11-26 06:22:23,911 | INFO     | current chi2=22.126186893461206 (change=17.809702057613997 %)
[2025-11-26 07:23:11] 2025-11-26 06:22:23,911 | INFO     | left removable region: 10
[2025-11-26 07:23:11] 2025-11-26 06:22:23,913 | INFO     | sum of square deviations: 749436126826.3256
[2025-11-26 07:23:11] 2025-11-26 06:22:23,970 | INFO     | sum of deviations: 2346812999468.5396
[2025-11-26 07:23:11] 2025-11-26 06:22:23,970 | INFO     | mean x: 1764096740.7064083
[2025-11-26 07:23:11] 2025-11-26 06:22:23,971 | INFO     | mean y: 2858046.9836065574
[2025-11-26 07:23:11] 2025-11-26 06:22:23,971 | INFO     | intersect: -5521302071.827006
[2025-11-26 07:23:11] 2025-11-26 06:22:23,972 | INFO     | chi2: 14.307080201369011
[2025-11-26 07:23:11] 2025-11-26 06:22:23,973 | INFO     | current memory leak: 3.13 B/s (using 1342 data points, chi2=14.31)
[2025-11-26 07:23:11] 2025-11-26 06:22:23,974 | INFO     | could have reported an average CPU frequency of 2249 MHz (46 samples)
[2025-11-26 07:23:11] 2025-11-26 06:22:23,975 | INFO     | ..............................
[2025-11-26 07:23:11] 2025-11-26 06:22:23,975 | INFO     | . Timing measurements:
[2025-11-26 07:23:11] 2025-11-26 06:22:23,975 | INFO     | . get job = 0 s
[2025-11-26 07:23:11] 2025-11-26 06:22:23,975 | INFO     | . initial setup = 5 s
[2025-11-26 07:23:11] 2025-11-26 06:22:23,975 | INFO     | . payload setup = 179 s
[2025-11-26 07:23:11] 2025-11-26 06:22:23,975 | INFO     | . stage-in = 0 s
[2025-11-26 07:23:11] 2025-11-26 06:22:23,975 | INFO     | . payload execution = 82985 s
[2025-11-26 07:23:11] 2025-11-26 06:22:23,975 | INFO     | . stage-out = 3 s
[2025-11-26 07:23:11] 2025-11-26 06:22:23,976 | INFO     | . log creation = 1 s
[2025-11-26 07:23:11] 2025-11-26 06:22:23,976 | INFO     | ..............................
[2025-11-26 07:23:11] 2025-11-26 06:22:24,506 | INFO     | 
[2025-11-26 07:23:11] 2025-11-26 06:22:24,507 | INFO     | job summary report
[2025-11-26 07:23:11] 2025-11-26 06:22:24,507 | INFO     | --------------------------------------------------
[2025-11-26 07:23:11] 2025-11-26 06:22:24,507 | INFO     | PanDA job id: 6895329011
[2025-11-26 07:23:11] 2025-11-26 06:22:24,507 | INFO     | task id: 47556137
[2025-11-26 07:23:11] 2025-11-26 06:22:24,507 | INFO     | errors: (none)
[2025-11-26 07:23:11] 2025-11-26 06:22:24,507 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:23:11] 2025-11-26 06:22:24,507 | INFO     | pilot state: finished 
[2025-11-26 07:23:11] 2025-11-26 06:22:24,507 | INFO     | transexitcode: 0
[2025-11-26 07:23:11] 2025-11-26 06:22:24,508 | INFO     | exeerrorcode: 0
[2025-11-26 07:23:11] 2025-11-26 06:22:24,508 | INFO     | exeerrordiag: 
[2025-11-26 07:23:11] 2025-11-26 06:22:24,508 | INFO     | exitcode: 0
[2025-11-26 07:23:11] 2025-11-26 06:22:24,508 | INFO     | exitmsg: OK
[2025-11-26 07:23:11] 2025-11-26 06:22:24,508 | INFO     | cpuconsumptiontime: 308009 s
[2025-11-26 07:23:11] 2025-11-26 06:22:24,508 | INFO     | nevents: 1000
[2025-11-26 07:23:11] 2025-11-26 06:22:24,508 | INFO     | neventsw: 0
[2025-11-26 07:23:11] 2025-11-26 06:22:24,508 | INFO     | pid: 798
[2025-11-26 07:23:11] 2025-11-26 06:22:24,508 | INFO     | pgrp: 798
[2025-11-26 07:23:11] 2025-11-26 06:22:24,508 | INFO     | corecount: 8
[2025-11-26 07:23:11] 2025-11-26 06:22:24,508 | INFO     | event service: False
[2025-11-26 07:23:11] 2025-11-26 06:22:24,509 | INFO     | sizes: {0: 2284079, 1: 2284278, 12: 2284278, 23: 2284306, 33: 2284334, 44: 2284390, 55: 2284546, 66: 2284574, 76: 2284602, 87: 2284658, 93: 2284948, 98: 2285256, 8
[2025-11-26 07:23:11] 2025-11-26 06:22:24,509 | INFO     | --------------------------------------------------
[2025-11-26 07:23:11] 2025-11-26 06:22:24,509 | INFO     | 
[2025-11-26 07:23:11] 2025-11-26 06:22:24,509 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-26 07:23:11] 2025-11-26 06:22:24,753 | INFO     | time since job start (83448s) is within the limit (172800.0s)
[2025-11-26 07:23:11] 2025-11-26 06:22:24,922 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,922 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,924 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:23:11] 2025-11-26 06:22:24,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:23:11] 2025-11-26 06:22:24,924 | INFO     | job 6895329011 has completed (purged errors)
[2025-11-26 07:23:11] 2025-11-26 06:22:24,924 | INFO     | overall cleanup function is called
[2025-11-26 07:23:11] 2025-11-26 06:22:25,945 | INFO     | --- collectZombieJob: --- 10, [798]
[2025-11-26 07:23:11] 2025-11-26 06:22:25,946 | INFO     | zombie collector waiting for pid 798
[2025-11-26 07:23:11] 2025-11-26 06:22:25,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:23:11] 2025-11-26 06:22:25,946 | INFO     | collected zombie processes
[2025-11-26 07:23:11] 2025-11-26 06:22:25,946 | INFO     | will attempt to kill all subprocesses of pid=798
[2025-11-26 07:23:11] 2025-11-26 06:22:26,081 | INFO     | process IDs to be killed: [798] (in reverse order)
[2025-11-26 07:23:11] 2025-11-26 06:22:26,882 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:23:11] 2025-11-26 06:22:26,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:23:11] 2025-11-26 06:22:26,885 | INFO     | did not find any defunct processes belonging to 798
[2025-11-26 07:23:11] 2025-11-26 06:22:26,888 | INFO     | did not find any defunct processes belonging to 798
[2025-11-26 07:23:11] 2025-11-26 06:22:26,953 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:23:11] 2025-11-26 06:22:26,953 | INFO     | ready for new job
[2025-11-26 07:23:11] 2025-11-26 06:22:26,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:23:11] 2025-11-26 06:22:26,958 | INFO     | ***************************************
[2025-11-26 07:23:11] 2025-11-26 06:22:26,959 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:23:11] 2025-11-26 06:22:26,959 | INFO     | ***************************************
[2025-11-26 07:23:11] 2025-11-26 06:22:26,959 | INFO     | 
[2025-11-26 07:23:11] 2025-11-26 06:22:26,964 | INFO     | pilot is running in a VM
[2025-11-26 07:23:11] 2025-11-26 06:22:26,965 | INFO     | architecture information:
[2025-11-26 07:23:11] 2025-11-26 06:22:26,971 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:23:11] 2025-11-26 06:22:27,101 | INFO     | cat /etc/os-release:
[2025-11-26 07:23:11] NAME="CentOS Linux"
[2025-11-26 07:23:11] VERSION="7 (Core)"
[2025-11-26 07:23:11] ID="centos"
[2025-11-26 07:23:11] ID_LIKE="rhel fedora"
[2025-11-26 07:23:11] VERSION_ID="7"
[2025-11-26 07:23:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:23:11] ANSI_COLOR="0;31"
[2025-11-26 07:23:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:23:11] HOME_URL="https://www.centos.org/"
[2025-11-26 07:23:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:23:11] 
[2025-11-26 07:23:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:23:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:23:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:23:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:23:11] 
[2025-11-26 07:23:11] 2025-11-26 06:22:27,101 | INFO     | ***************************************
[2025-11-26 07:23:11] 2025-11-26 06:22:27,605 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-26 07:23:11] 2025-11-26 06:22:27,772 | INFO     | sufficient remaining disk space (494971912192 B)
[2025-11-26 07:23:11] 2025-11-26 06:22:27,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:23:11] 2025-11-26 06:22:27,773 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:23:11] 2025-11-26 06:22:27,773 | INFO     | update_server=False
[2025-11-26 07:23:11] 2025-11-26 06:22:27,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:23:11] 2025-11-26 06:22:27,776 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:23:11] 2025-11-26 06:22:27,968 | INFO     | all data control threads have been joined
[2025-11-26 07:23:11] 2025-11-26 06:22:28,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:23:11] 2025-11-26 06:22:28,007 | INFO     | aborting loop
[2025-11-26 07:23:11] 2025-11-26 06:22:28,461 | INFO     | all job control threads have been joined
[2025-11-26 07:23:11] 2025-11-26 06:22:28,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:23:11] 2025-11-26 06:22:28,779 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:28,862 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:28,880 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:28,975 | INFO     | [data] control thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:29,013 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:29,068 | INFO     | all payload control threads have been joined
[2025-11-26 07:23:11] 2025-11-26 06:22:29,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:23:11] 2025-11-26 06:22:29,136 | INFO     | [job] validate thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:29,365 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:29,467 | INFO     | [job] control thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:29,588 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:29,783 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:29,877 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:30,065 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:30,075 | INFO     | [payload] control thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:30,123 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:30,148 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:32,755 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:23:11] 2025-11-26 06:22:57,928 | INFO     | PID=26673 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 07:23:11] 2025-11-26 06:22:57,928 | INFO     | .. there are 9 such processes running
[2025-11-26 07:23:11] 2025-11-26 06:22:57,929 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:23:11] 2025-11-26 06:22:57,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:23:11] 2025-11-26 06:22:57,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:23:11] 2025-11-26 06:23:01,761 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:23:11] 2025-11-26 06:23:01,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648829507392)>', '<ExcThread(monitor, started 140648518752000)>']
[2025-11-26 07:23:11] 2025-11-26 06:23:01,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:23:11] 2025-11-26 06:23:01,954 | INFO     | [monitor] control thread has ended
[2025-11-26 07:23:11] 2025-11-26 06:23:06,975 | INFO     | all workflow threads have been joined
[2025-11-26 07:23:11] 2025-11-26 06:23:06,976 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:23:11] 2025-11-26 06:23:06,976 | INFO     | traces error code: 0
[2025-11-26 07:23:11] 2025-11-26 06:23:06,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:23:11] 2025-11-26 06:23:07,310 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:23:11] 2025-11-26 06:23:07,380 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:23:11] 2025-11-26 06:23:07,448 [wrapper] pilotpid: 26673
[2025-11-26 07:23:11] 2025-11-26 06:23:07,542 [wrapper] Pilot exit status: 0
[2025-11-26 07:23:11] 2025-11-26 06:23:07,815 [wrapper] pandaids: 6895329011
[2025-11-26 07:23:11] 2025-11-26 06:23:08,385 [wrapper] cleanup supervisor_pilot 18496 26674
[2025-11-26 07:23:11] 2025-11-26 06:23:08,451 [wrapper] Test setup, not cleaning
[2025-11-26 07:23:11] 2025-11-26 06:23:08,561 [wrapper] apfmon messages muted
[2025-11-26 07:23:11] 2025-11-26 06:23:08,623 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:23:11] 2025-11-26 06:23:08,693 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:23:11]  *** Error codes and diagnostics ***
[2025-11-26 07:23:11]     "exeErrorCode": 0,
[2025-11-26 07:23:11]     "exeErrorDiag": "",
[2025-11-26 07:23:11]     "pilotErrorCode": 0,
[2025-11-26 07:23:11]     "pilotErrorDiag": "",
[2025-11-26 07:23:11]  *** Listing of results directory ***
[2025-11-26 07:23:11] total 1342172
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc    576529 Nov 21 19:11 pilot3.tar.gz
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc      5112 Nov 21 19:27 queuedata.json
[2025-11-26 07:23:11] -rwx------. 1 boinc boinc     36292 Nov 21 19:29 runpilot2-wrapper.sh
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc       100 Nov 25 08:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:23:11] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 08:07 run_atlas
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc       105 Nov 25 08:07 job.xml
[2025-11-26 07:23:11] -rw-r--r--. 2 boinc boinc 412400684 Nov 25 08:07 EVNT.47483658._000100.pool.root.1
[2025-11-26 07:23:11] drwxrwx--x. 2 boinc boinc        68 Nov 25 08:07 shared
[2025-11-26 07:23:11] -rw-r--r--. 2 boinc boinc    590100 Nov 25 08:07 input.tar.gz
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc      6393 Nov 25 08:07 init_data.xml
[2025-11-26 07:23:11] -rw-r--r--. 2 boinc boinc     15847 Nov 25 08:07 start_atlas.sh
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc         0 Nov 25 08:07 boinc_lockfile
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc      2780 Nov 25 08:07 pandaJob.out
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc    991801 Nov 25 08:11 agis_schedconf.cvmfs.json
[2025-11-26 07:23:11] drwx------. 5 boinc boinc      4096 Nov 25 08:11 pilot3
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc       533 Nov 26 06:55 boinc_task_state.xml
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc 930885344 Nov 26 07:19 HITS.47556137._000991.pool.root.1
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc      1030 Nov 26 07:20 memory_monitor_summary.json
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc   1516240 Nov 26 07:20 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc   2450001 Nov 26 07:20 log.47556137._000991.job.log.tgz.1
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc      8623 Nov 26 07:22 heartbeat.json
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc        95 Nov 26 07:22 pilot_heartbeat.json
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc      8192 Nov 26 07:22 boinc_mmap_file
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc        29 Nov 26 07:22 wrapper_checkpoint.txt
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc      4885 Nov 26 07:23 pilotlog.txt
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc  11144414 Nov 26 07:23 log.47556137._000991.job.log.1
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc       353 Nov 26 07:23 output.list
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc       620 Nov 26 07:23 runtime_log
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc  13619200 Nov 26 07:23 result.tar.gz
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc      8833 Nov 26 07:23 runtime_log.err
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc       662 Nov 26 07:23 idyMDml3kg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDdJKDmWqXzrn.diag
[2025-11-26 07:23:11] -rw-r--r--. 1 boinc boinc     21436 Nov 26 07:23 stderr.txt
[2025-11-26 07:23:11] HITS file was successfully produced:
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc 930885344 Nov 26 07:19 shared/HITS.pool.root.1
[2025-11-26 07:23:11]  *** Contents of shared directory: ***
[2025-11-26 07:23:11] total 1325700
[2025-11-26 07:23:11] -rw-r--r--. 2 boinc boinc 412400684 Nov 25 08:07 ATLAS.root_0
[2025-11-26 07:23:11] -rw-r--r--. 2 boinc boinc    590100 Nov 25 08:07 input.tar.gz
[2025-11-26 07:23:11] -rw-r--r--. 2 boinc boinc     15847 Nov 25 08:07 start_atlas.sh
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc 930885344 Nov 26 07:19 HITS.pool.root.1
[2025-11-26 07:23:11] -rw-------. 1 boinc boinc  13619200 Nov 26 07:23 result.tar.gz
07:23:12 (22785): run_atlas exited; CPU time 308457.872894
07:23:12 (22785): called boinc_finish(0)

</stderr_txt>
]]>

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