Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:57:53 (1029239): wrapper (7.7.26015): starting
11:57:53 (1029239): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 11:57:53] Arguments: --nthreads 3
[2025-11-25 11:57:53] Threads: 3
[2025-11-25 11:57:53] Checking for CVMFS
[2025-11-25 11:57:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:57:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:57:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:57:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:57:53] 2.9.2.0 3943730 9639 87132 153279 0 81 29820558 36864000 0 130560 0 3561002 99.929 502280 4637 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 11:57:53] CVMFS is ok
[2025-11-25 11:57:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:57:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:57:53] Further information can be found at the LHC@home message board.
[2025-11-25 11:57:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:57:53] Checking for apptainer binary...
[2025-11-25 11:57:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:57:53] Running /usr/bin/apptainer --version
[2025-11-25 11:57:53] apptainer version 1.4.1-1.1
[2025-11-25 11:57:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:57:53] thA331a
[2025-11-25 11:57:53] apptainer works
[2025-11-25 11:57:53] Set ATHENA_PROC_NUMBER=3
[2025-11-25 11:57:53] Set ATHENA_CORE_NUMBER=3
[2025-11-25 11:57:53] Starting ATLAS job with PandaID=6895328908
[2025-11-25 11:57:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:04:38]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:04:38] 2025-11-25 19:03:47,153 | INFO     | architecture information:
[2025-11-25 20:04:38] 2025-11-25 19:03:47,153 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:04:38] 2025-11-25 19:03:47,161 | INFO     | cat /etc/os-release:
[2025-11-25 20:04:38] NAME="CentOS Linux"
[2025-11-25 20:04:38] VERSION="7 (Core)"
[2025-11-25 20:04:38] ID="centos"
[2025-11-25 20:04:38] ID_LIKE="rhel fedora"
[2025-11-25 20:04:38] VERSION_ID="7"
[2025-11-25 20:04:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:04:38] ANSI_COLOR="0;31"
[2025-11-25 20:04:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:04:38] HOME_URL="https://www.centos.org/"
[2025-11-25 20:04:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:04:38] 
[2025-11-25 20:04:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:04:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:04:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:04:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:04:38] 
[2025-11-25 20:04:38] 2025-11-25 19:03:47,161 | INFO     | ***************************************
[2025-11-25 20:04:38] 2025-11-25 19:03:47,664 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 20:04:38] 2025-11-25 19:03:47,676 | INFO     | sufficient remaining disk space (326939705344 B)
[2025-11-25 20:04:38] 2025-11-25 19:03:47,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:04:38] 2025-11-25 19:03:47,676 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:04:38] 2025-11-25 19:03:47,676 | INFO     | update_server=False
[2025-11-25 20:04:38] 2025-11-25 19:03:47,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:04:38] 2025-11-25 19:03:47,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:04:38] 2025-11-25 19:03:47,677 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:04:38] 2025-11-25 19:03:47,677 | INFO     | aborting loop
[2025-11-25 20:04:38] 2025-11-25 19:03:47,735 | INFO     | all job control threads have been joined
[2025-11-25 20:04:38] 2025-11-25 19:03:47,812 | INFO     | all data control threads have been joined
[2025-11-25 20:04:38] 2025-11-25 19:03:47,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:04:38] 2025-11-25 19:03:48,126 | INFO     | all payload control threads have been joined
[2025-11-25 20:04:38] 2025-11-25 19:03:48,682 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:48,682 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:48,682 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:48,732 | INFO     | [job] validate thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:48,740 | INFO     | [job] control thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:48,818 | INFO     | [data] control thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:49,132 | INFO     | [payload] control thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:49,358 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:49,612 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:49,974 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:50,092 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:50,151 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:50,182 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:50,260 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:50,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:04:38] 2025-11-25 19:03:54,497 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:03:57,939 | INFO     | job.realtimelogging is not enabled
[2025-11-25 20:04:38] 2025-11-25 19:03:58,944 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:04:38] 2025-11-25 19:04:17,552 | INFO     | PID=1032959 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 20:04:38] 2025-11-25 19:04:17,552 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:04:38] 2025-11-25 19:04:17,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:04:38] 2025-11-25 19:04:17,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:04:38] 2025-11-25 19:04:32,353 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:04:38] 2025-11-25 19:04:33,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755392403264)>', '<ExcThread(monitor, started 139754536429312)>']
[2025-11-25 20:04:38] 2025-11-25 19:04:33,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:04:38] 2025-11-25 19:04:33,635 | INFO     | [monitor] control thread has ended
[2025-11-25 20:04:38] 2025-11-25 19:04:38,271 | INFO     | all workflow threads have been joined
[2025-11-25 20:04:38] 2025-11-25 19:04:38,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:04:38] 2025-11-25 19:04:38,272 | INFO     | traces error code: 0
[2025-11-25 20:04:38] 2025-11-25 19:04:38,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:04:38] 2025-11-25 19:04:38,321 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:04:38] 2025-11-25 19:04:38,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:04:38] 2025-11-25 19:04:38,325 [wrapper] pilotpid: 1032959
[2025-11-25 20:04:38] 2025-11-25 19:04:38,327 [wrapper] Pilot exit status: 0
[2025-11-25 20:04:38] 2025-11-25 19:04:38,334 [wrapper] pandaids: 6895328908
[2025-11-25 20:04:38] 2025-11-25 19:04:38,350 [wrapper] cleanup supervisor_pilot 1090195 1032960
[2025-11-25 20:04:38] 2025-11-25 19:04:38,353 [wrapper] Test setup, not cleaning
[2025-11-25 20:04:38] 2025-11-25 19:04:38,355 [wrapper] apfmon messages muted
[2025-11-25 20:04:38] 2025-11-25 19:04:38,358 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:04:38] 2025-11-25 19:04:38,360 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:04:38]  *** Error codes and diagnostics ***
[2025-11-25 20:04:38]     "exeErrorCode": 0,
[2025-11-25 20:04:38]     "exeErrorDiag": "",
[2025-11-25 20:04:38]     "pilotErrorCode": 0,
[2025-11-25 20:04:38]     "pilotErrorDiag": "",
[2025-11-25 20:04:38]  *** Listing of results directory ***
[2025-11-25 20:04:38] total 1323388
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc    576529 Nov 21 19:11 pilot3.tar.gz
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc      5112 Nov 21 19:14 queuedata.json
[2025-11-25 20:04:38] -rwx------ 1 boinc boinc     36292 Nov 21 19:14 runpilot2-wrapper.sh
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc       100 Nov 25 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:04:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 11:57 run_atlas
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc       105 Nov 25 11:57 job.xml
[2025-11-25 20:04:38] -rw-r--r-- 2 boinc boinc 411499546 Nov 25 11:57 EVNT.47483658._000094.pool.root.1
[2025-11-25 20:04:38] -rw-r--r-- 2 boinc boinc    590100 Nov 25 11:57 input.tar.gz
[2025-11-25 20:04:38] -rw-r--r-- 2 boinc boinc     15847 Nov 25 11:57 start_atlas.sh
[2025-11-25 20:04:38] drwxrwx--x 2 boinc boinc      4096 Nov 25 11:57 shared
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc         0 Nov 25 11:57 boinc_setup_complete
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc      6442 Nov 25 11:57 init_data.xml
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc         0 Nov 25 11:57 boinc_lockfile
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc      2783 Nov 25 11:57 pandaJob.out
[2025-11-25 20:04:38] -rw------- 1 boinc boinc    991894 Nov 25 11:57 agis_schedconf.cvmfs.json
[2025-11-25 20:04:38] drwx------ 5 boinc boinc      4096 Nov 25 11:57 pilot3
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc       532 Nov 25 19:59 boinc_task_state.xml
[2025-11-25 20:04:38] -rw------- 1 boinc boinc 929189729 Nov 25 20:03 HITS.47556137._000940.pool.root.1
[2025-11-25 20:04:38] -rw------- 1 boinc boinc        95 Nov 25 20:03 pilot_heartbeat.json
[2025-11-25 20:04:38] -rw------- 1 boinc boinc      1037 Nov 25 20:03 memory_monitor_summary.json
[2025-11-25 20:04:38] -rw------- 1 boinc boinc   1516240 Nov 25 20:03 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:04:38] -rw------- 1 boinc boinc   1172362 Nov 25 20:03 log.47556137._000940.job.log.tgz.1
[2025-11-25 20:04:38] -rw------- 1 boinc boinc      8568 Nov 25 20:03 heartbeat.json
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc        28 Nov 25 20:04 wrapper_checkpoint.txt
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc      8192 Nov 25 20:04 boinc_mmap_file
[2025-11-25 20:04:38] -rw------- 1 boinc boinc      4824 Nov 25 20:04 pilotlog.txt
[2025-11-25 20:04:38] -rw------- 1 boinc boinc   4105690 Nov 25 20:04 log.47556137._000940.job.log.1
[2025-11-25 20:04:38] -rw------- 1 boinc boinc       353 Nov 25 20:04 output.list
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc       620 Nov 25 20:04 runtime_log
[2025-11-25 20:04:38] -rw------- 1 boinc boinc   5294080 Nov 25 20:04 result.tar.gz
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc      8903 Nov 25 20:04 runtime_log.err
[2025-11-25 20:04:38] -rw------- 1 boinc boinc       666 Nov 25 20:04 PHGMDmzpkg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTcJKDmZ6KaGn.diag
[2025-11-25 20:04:38] -rw-r--r-- 1 boinc boinc      9065 Nov 25 20:04 stderr.txt
[2025-11-25 20:04:38] HITS file was successfully produced:
[2025-11-25 20:04:38] -rw------- 1 boinc boinc 929189729 Nov 25 20:03 shared/HITS.pool.root.1
[2025-11-25 20:04:38]  *** Contents of shared directory: ***
[2025-11-25 20:04:38] total 1315044
[2025-11-25 20:04:38] -rw-r--r-- 2 boinc boinc 411499546 Nov 25 11:57 ATLAS.root_0
[2025-11-25 20:04:38] -rw-r--r-- 2 boinc boinc    590100 Nov 25 11:57 input.tar.gz
[2025-11-25 20:04:38] -rw-r--r-- 2 boinc boinc     15847 Nov 25 11:57 start_atlas.sh
[2025-11-25 20:04:38] -rw------- 1 boinc boinc 929189729 Nov 25 20:03 HITS.pool.root.1
[2025-11-25 20:04:38] -rw------- 1 boinc boinc   5294080 Nov 25 20:04 result.tar.gz
20:04:40 (1029239): run_atlas exited; CPU time 86007.511225
20:04:40 (1029239): called boinc_finish(0)

</stderr_txt>
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