Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:13:40 (281519): wrapper (7.7.26015): starting
05:13:40 (281519): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 05:13:40] Arguments: --nthreads 4
[2025-11-25 05:13:40] Threads: 4
[2025-11-25 05:13:40] Checking for CVMFS
[2025-11-25 05:13:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:13:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:13:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:13:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:13:40] 2.9.2.0 3127036 9403 91100 153269 2 58 34307466 36864001 0 130560 0 3750154 99.932 497316 6741 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 05:13:40] CVMFS is ok
[2025-11-25 05:13:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 05:13:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 05:13:40] Further information can be found at the LHC@home message board.
[2025-11-25 05:13:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:13:40] Checking for apptainer binary...
[2025-11-25 05:13:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:13:40] Running /usr/bin/apptainer --version
[2025-11-25 05:13:40] apptainer version 1.4.1-1.1
[2025-11-25 05:13:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:13:40] thA334
[2025-11-25 05:13:40] apptainer works
[2025-11-25 05:13:40] Set ATHENA_PROC_NUMBER=4
[2025-11-25 05:13:40] Set ATHENA_CORE_NUMBER=4
[2025-11-25 05:13:40] Starting ATLAS job with PandaID=6895328909
[2025-11-25 05:13:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:00:43]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:00:43] 2025-11-25 11:00:12,575 | INFO     | architecture information:
[2025-11-25 12:00:43] 2025-11-25 11:00:12,575 | INFO     | executing command: cat /etc/os-release
[2025-11-25 12:00:43] 2025-11-25 11:00:12,588 | INFO     | cat /etc/os-release:
[2025-11-25 12:00:43] NAME="CentOS Linux"
[2025-11-25 12:00:43] VERSION="7 (Core)"
[2025-11-25 12:00:43] ID="centos"
[2025-11-25 12:00:43] ID_LIKE="rhel fedora"
[2025-11-25 12:00:43] VERSION_ID="7"
[2025-11-25 12:00:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:00:43] ANSI_COLOR="0;31"
[2025-11-25 12:00:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:00:43] HOME_URL="https://www.centos.org/"
[2025-11-25 12:00:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:00:43] 
[2025-11-25 12:00:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:00:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:00:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:00:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:00:43] 
[2025-11-25 12:00:43] 2025-11-25 11:00:12,588 | INFO     | ***************************************
[2025-11-25 12:00:43] 2025-11-25 11:00:13,092 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 12:00:43] 2025-11-25 11:00:13,109 | INFO     | sufficient remaining disk space (221598711808 B)
[2025-11-25 12:00:43] 2025-11-25 11:00:13,109 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:00:43] 2025-11-25 11:00:13,109 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:00:43] 2025-11-25 11:00:13,109 | INFO     | update_server=False
[2025-11-25 12:00:43] 2025-11-25 11:00:13,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:00:43] 2025-11-25 11:00:13,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:00:43] 2025-11-25 11:00:13,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:00:43] 2025-11-25 11:00:13,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:00:43] 2025-11-25 11:00:13,705 | INFO     | aborting loop
[2025-11-25 12:00:43] 2025-11-25 11:00:14,080 | INFO     | all data control threads have been joined
[2025-11-25 12:00:43] 2025-11-25 11:00:14,115 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:14,115 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:14,366 | INFO     | all payload control threads have been joined
[2025-11-25 12:00:43] 2025-11-25 11:00:14,421 | INFO     | all job control threads have been joined
[2025-11-25 12:00:43] 2025-11-25 11:00:14,684 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:14,711 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:14,711 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:14,906 | INFO     | [job] validate thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:15,086 | INFO     | [data] control thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:15,134 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:15,177 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:15,324 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:15,364 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:15,372 | INFO     | [payload] control thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:15,427 | INFO     | [job] control thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:15,595 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:15,684 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:16,087 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:00:43] 2025-11-25 11:00:20,093 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:00:43] 2025-11-25 11:00:20,349 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:00:43] 2025-11-25 11:00:20,685 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140589356054336)>', '<ExcThread(monitor, started 140588523427584)>']
[2025-11-25 12:00:43] 2025-11-25 11:00:25,709 | INFO     | all workflow threads have been joined
[2025-11-25 12:00:43] 2025-11-25 11:00:25,710 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:00:43] 2025-11-25 11:00:25,710 | INFO     | traces error code: 0
[2025-11-25 12:00:43] 2025-11-25 11:00:25,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:00:43] 2025-11-25 11:00:43,687 | INFO     | PID=285307 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 12:00:43] 2025-11-25 11:00:43,687 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:00:43] 2025-11-25 11:00:43,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:00:43] 2025-11-25 11:00:43,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:00:43] 2025-11-25 11:00:43,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:00:43] 2025-11-25 11:00:43,687 | INFO     | [monitor] control thread has ended
[2025-11-25 12:00:43] 2025-11-25 11:00:43,752 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:00:43] 2025-11-25 11:00:43,756 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:00:43] 2025-11-25 11:00:43,759 [wrapper] pilotpid: 285307
[2025-11-25 12:00:43] 2025-11-25 11:00:43,763 [wrapper] Pilot exit status: 0
[2025-11-25 12:00:43] 2025-11-25 11:00:43,773 [wrapper] pandaids: 6895328909
[2025-11-25 12:00:43] 2025-11-25 11:00:43,794 [wrapper] cleanup supervisor_pilot  336998 285308
[2025-11-25 12:00:43] 2025-11-25 11:00:43,797 [wrapper] Test setup, not cleaning
[2025-11-25 12:00:43] 2025-11-25 11:00:43,801 [wrapper] apfmon messages muted
[2025-11-25 12:00:43] 2025-11-25 11:00:43,804 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:00:43] 2025-11-25 11:00:43,808 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:00:43]  *** Error codes and diagnostics ***
[2025-11-25 12:00:43]     "exeErrorCode": 0,
[2025-11-25 12:00:43]     "exeErrorDiag": "",
[2025-11-25 12:00:43]     "pilotErrorCode": 0,
[2025-11-25 12:00:43]     "pilotErrorDiag": "",
[2025-11-25 12:00:43]  *** Listing of results directory ***
[2025-11-25 12:00:43] total 1301300
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc    576529 Nov 21 19:11 pilot3.tar.gz
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc      5112 Nov 21 19:14 queuedata.json
[2025-11-25 12:00:43] -rwx------ 1 boinc boinc     36292 Nov 21 19:14 runpilot2-wrapper.sh
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc       100 Nov 25 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:00:43] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 05:13 run_atlas
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc       105 Nov 25 05:13 job.xml
[2025-11-25 12:00:43] -rw-r--r-- 2 boinc boinc 410880241 Nov 25 05:13 EVNT.47483658._000095.pool.root.1
[2025-11-25 12:00:43] -rw-r--r-- 2 boinc boinc    590099 Nov 25 05:13 input.tar.gz
[2025-11-25 12:00:43] -rw-r--r-- 2 boinc boinc     15847 Nov 25 05:13 start_atlas.sh
[2025-11-25 12:00:43] drwxrwx--x 2 boinc boinc      4096 Nov 25 05:13 shared
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc         0 Nov 25 05:13 boinc_setup_complete
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc      6369 Nov 25 05:13 init_data.xml
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc         0 Nov 25 05:13 boinc_lockfile
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc      2780 Nov 25 05:13 pandaJob.out
[2025-11-25 12:00:43] -rw------- 1 boinc boinc    991801 Nov 25 05:13 agis_schedconf.cvmfs.json
[2025-11-25 12:00:43] drwx------ 5 boinc boinc      4096 Nov 25 05:13 pilot3
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc       531 Nov 25 11:55 boinc_task_state.xml
[2025-11-25 12:00:43] -rw------- 1 boinc boinc 908381272 Nov 25 11:59 HITS.47556137._000941.pool.root.1
[2025-11-25 12:00:43] -rw------- 1 boinc boinc        95 Nov 25 11:59 pilot_heartbeat.json
[2025-11-25 12:00:43] -rw------- 1 boinc boinc      1028 Nov 25 11:59 memory_monitor_summary.json
[2025-11-25 12:00:43] -rw------- 1 boinc boinc   1516240 Nov 25 12:00 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:00:43] -rw------- 1 boinc boinc   1250699 Nov 25 12:00 log.47556137._000941.job.log.tgz.1
[2025-11-25 12:00:43] -rw------- 1 boinc boinc      8561 Nov 25 12:00 heartbeat.json
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc      8192 Nov 25 12:00 boinc_mmap_file
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc        28 Nov 25 12:00 wrapper_checkpoint.txt
[2025-11-25 12:00:43] -rw------- 1 boinc boinc       746 Nov 25 12:00 pilotlog.txt
[2025-11-25 12:00:43] -rw------- 1 boinc boinc   3434279 Nov 25 12:00 log.47556137._000941.job.log.1
[2025-11-25 12:00:43] -rw------- 1 boinc boinc       353 Nov 25 12:00 output.list
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc       620 Nov 25 12:00 runtime_log
[2025-11-25 12:00:43] -rw------- 1 boinc boinc   4700160 Nov 25 12:00 result.tar.gz
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc      8898 Nov 25 12:00 runtime_log.err
[2025-11-25 12:00:43] -rw------- 1 boinc boinc       665 Nov 25 12:00 isIMDmzpkg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUcJKDmp0UiMo.diag
[2025-11-25 12:00:43] -rw-r--r-- 1 boinc boinc      8966 Nov 25 12:00 stderr.txt
[2025-11-25 12:00:43] HITS file was successfully produced:
[2025-11-25 12:00:43] -rw------- 1 boinc boinc 908381272 Nov 25 11:59 shared/HITS.pool.root.1
[2025-11-25 12:00:43]  *** Contents of shared directory: ***
[2025-11-25 12:00:43] total 1293540
[2025-11-25 12:00:43] -rw-r--r-- 2 boinc boinc 410880241 Nov 25 05:13 ATLAS.root_0
[2025-11-25 12:00:43] -rw-r--r-- 2 boinc boinc    590099 Nov 25 05:13 input.tar.gz
[2025-11-25 12:00:43] -rw-r--r-- 2 boinc boinc     15847 Nov 25 05:13 start_atlas.sh
[2025-11-25 12:00:43] -rw------- 1 boinc boinc 908381272 Nov 25 11:59 HITS.pool.root.1
[2025-11-25 12:00:43] -rw------- 1 boinc boinc   4700160 Nov 25 12:00 result.tar.gz
12:00:45 (281519): run_atlas exited; CPU time 95300.981150
12:00:45 (281519): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN