Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:57:14 (14130): wrapper (7.7.26015): starting
10:57:14 (14130): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 10:57:14] Arguments: --nthreads 8
[2025-11-22 10:57:14] Threads: 8
[2025-11-22 10:57:14] Checking for CVMFS
[2025-11-22 10:57:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 10:57:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 10:57:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 10:57:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 10:57:15] 2.11.2.0 2802 67748 80040 153176 3 82 11181976 20275201 1 130560 0 19095243 99.914 3312612 20720 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 10:57:15] CVMFS is ok
[2025-11-22 10:57:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 10:57:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 10:57:15] Further information can be found at the LHC@home message board.
[2025-11-22 10:57:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 10:57:15] Checking for apptainer binary...
[2025-11-22 10:57:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 10:57:15] Running /usr/bin/apptainer --version
[2025-11-22 10:57:15] apptainer version 1.3.2-1.el7
[2025-11-22 10:57:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 10:57:16] c-204-8.aglt2.org
[2025-11-22 10:57:16] apptainer works
[2025-11-22 10:57:16] Set ATHENA_PROC_NUMBER=8
[2025-11-22 10:57:16] Set ATHENA_CORE_NUMBER=8
[2025-11-22 10:57:16] Starting ATLAS job with PandaID=6895328673
[2025-11-22 10:57:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:39:06]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:39:06] 2025-11-23 04:38:34,386 | INFO     | monitor loop #3358: job 0:6895328673 is in state 'finished'
[2025-11-22 23:39:06] 2025-11-23 04:38:34,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:39:06] 2025-11-23 04:38:34,453 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 23:39:06] 2025-11-23 04:38:34,456 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-22 23:39:06] 2025-11-23 04:38:34,458 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895328673/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 23:39:06] 2025-11-23 04:38:34,459 | INFO     | extracted standard info from prmon json
[2025-11-22 23:39:06] 2025-11-23 04:38:34,459 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 23:39:06] 2025-11-23 04:38:34,460 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 23:39:06] 2025-11-23 04:38:34,473 | INFO     | fitting pss+swap vs Time
[2025-11-22 23:39:06] 2025-11-23 04:38:34,474 | INFO     | sum of square deviations: 129772415226.96658
[2025-11-22 23:39:06] 2025-11-23 04:38:34,485 | INFO     | sum of deviations: 902849984654.1624
[2025-11-22 23:39:06] 2025-11-23 04:38:34,486 | INFO     | mean x: 1763849871.9933155
[2025-11-22 23:39:06] 2025-11-23 04:38:34,486 | INFO     | mean y: 2863250.8328877008
[2025-11-22 23:39:06] 2025-11-23 04:38:34,486 | INFO     | intersect: -12268556889.388815
[2025-11-22 23:39:06] 2025-11-23 04:38:34,487 | INFO     | chi2: 5.303031954213029
[2025-11-22 23:39:06] 2025-11-23 04:38:34,488 | INFO     | sum of square deviations: 127187493255.74168
[2025-11-22 23:39:06] 2025-11-23 04:38:34,499 | INFO     | sum of deviations: 1126069944052.4197
[2025-11-22 23:39:06] 2025-11-23 04:38:34,499 | INFO     | mean x: 1763849719.4966352
[2025-11-22 23:39:06] 2025-11-23 04:38:34,499 | INFO     | mean y: 2876414.5679676984
[2025-11-22 23:39:06] 2025-11-23 04:38:34,499 | INFO     | intersect: -15613581651.451721
[2025-11-22 23:39:06] 2025-11-23 04:38:34,500 | INFO     | chi2: 2.6834605168473216
[2025-11-22 23:39:06] 2025-11-23 04:38:34,500 | INFO     | current chi2=2.6834605168473216 (change=49.3976174381633 %)
[2025-11-22 23:39:06] 2025-11-23 04:38:34,501 | INFO     | sum of square deviations: 124637130072.0
[2025-11-22 23:39:06] 2025-11-23 04:38:34,512 | INFO     | sum of deviations: 1199471095660.0002
[2025-11-22 23:39:06] 2025-11-23 04:38:34,512 | INFO     | mean x: 1763849567.0
[2025-11-22 23:39:06] 2025-11-23 04:38:34,513 | INFO     | mean y: 2880797.0067750677
[2025-11-22 23:39:06] 2025-11-23 04:38:34,513 | INFO     | intersect: -16971888852.18784
[2025-11-22 23:39:06] 2025-11-23 04:38:34,513 | INFO     | chi2: 2.2649205906950853
[2025-11-22 23:39:06] 2025-11-23 04:38:34,514 | INFO     | current chi2=2.2649205906950853 (change=15.597021961924007 %)
[2025-11-22 23:39:06] 2025-11-23 04:38:34,514 | INFO     | right removable region: 737
[2025-11-22 23:39:06] 2025-11-23 04:38:34,514 | INFO     | sum of square deviations: 127187268165.74167
[2025-11-22 23:39:06] 2025-11-23 04:38:34,526 | INFO     | sum of deviations: 705597422462.7792
[2025-11-22 23:39:06] 2025-11-23 04:38:34,526 | INFO     | mean x: 1763850024.4966352
[2025-11-22 23:39:06] 2025-11-23 04:38:34,526 | INFO     | mean y: 2874868.1117092865
[2025-11-22 23:39:06] 2025-11-23 04:38:34,526 | INFO     | intersect: -9782444439.744644
[2025-11-22 23:39:06] 2025-11-23 04:38:34,527 | INFO     | chi2: 3.2187574689460448
[2025-11-22 23:39:06] 2025-11-23 04:38:34,527 | INFO     | current chi2=3.2187574689460448 (change=39.30344948442407 %)
[2025-11-22 23:39:06] 2025-11-23 04:38:34,528 | INFO     | sum of square deviations: 124636725214.99847
[2025-11-22 23:39:06] 2025-11-23 04:38:34,539 | INFO     | sum of deviations: 662445323178.0465
[2025-11-22 23:39:06] 2025-11-23 04:38:34,539 | INFO     | mean x: 1763850176.998645
[2025-11-22 23:39:06] 2025-11-23 04:38:34,539 | INFO     | mean y: 2877447.0460704607
[2025-11-22 23:39:06] 2025-11-23 04:38:34,539 | INFO     | intersect: -9372002216.423403
[2025-11-22 23:39:06] 2025-11-23 04:38:34,540 | INFO     | chi2: 3.180746256860732
[2025-11-22 23:39:06] 2025-11-23 04:38:34,540 | INFO     | current chi2=3.180746256860732 (change=1.1809281206191449 %)
[2025-11-22 23:39:06] 2025-11-23 04:38:34,540 | INFO     | left removable region: 20
[2025-11-22 23:39:06] 2025-11-23 04:38:34,541 | INFO     | sum of square deviations: 114297193215.24203
[2025-11-22 23:39:06] 2025-11-23 04:38:34,551 | INFO     | sum of deviations: 909052163039.914
[2025-11-22 23:39:06] 2025-11-23 04:38:34,552 | INFO     | mean x: 1763850146.5034866
[2025-11-22 23:39:06] 2025-11-23 04:38:34,552 | INFO     | mean y: 2898659.6345885633
[2025-11-22 23:39:06] 2025-11-23 04:38:34,552 | INFO     | intersect: -14025720467.851027
[2025-11-22 23:39:06] 2025-11-23 04:38:34,553 | INFO     | chi2: 0.11497453132321998
[2025-11-22 23:39:06] 2025-11-23 04:38:34,553 | INFO     | current memory leak: 7.95 B/s (using 717 data points, chi2=0.11)
[2025-11-22 23:39:06] 2025-11-23 04:38:34,553 | INFO     | could have reported an average CPU frequency of 2176 MHz (28 samples)
[2025-11-22 23:39:06] 2025-11-23 04:38:34,554 | INFO     | ..............................
[2025-11-22 23:39:06] 2025-11-23 04:38:34,554 | INFO     | . Timing measurements:
[2025-11-22 23:39:06] 2025-11-23 04:38:34,554 | INFO     | . get job = 0 s
[2025-11-22 23:39:06] 2025-11-23 04:38:34,554 | INFO     | . initial setup = 2 s
[2025-11-22 23:39:06] 2025-11-23 04:38:34,554 | INFO     | . payload setup = 9 s
[2025-11-22 23:39:06] 2025-11-23 04:38:34,554 | INFO     | . stage-in = 0 s
[2025-11-22 23:39:06] 2025-11-23 04:38:34,554 | INFO     | . payload execution = 45615 s
[2025-11-22 23:39:06] 2025-11-23 04:38:34,554 | INFO     | . stage-out = 3 s
[2025-11-22 23:39:06] 2025-11-23 04:38:34,554 | INFO     | . log creation = 0 s
[2025-11-22 23:39:06] 2025-11-23 04:38:34,555 | INFO     | ..............................
[2025-11-22 23:39:06] 2025-11-23 04:38:34,855 | INFO     | 
[2025-11-22 23:39:06] 2025-11-23 04:38:34,855 | INFO     | job summary report
[2025-11-22 23:39:06] 2025-11-23 04:38:34,856 | INFO     | --------------------------------------------------
[2025-11-22 23:39:06] 2025-11-23 04:38:34,856 | INFO     | PanDA job id: 6895328673
[2025-11-22 23:39:06] 2025-11-23 04:38:34,856 | INFO     | task id: 47556137
[2025-11-22 23:39:06] 2025-11-23 04:38:34,856 | INFO     | errors: (none)
[2025-11-22 23:39:06] 2025-11-23 04:38:34,856 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:39:06] 2025-11-23 04:38:34,857 | INFO     | pilot state: finished 
[2025-11-22 23:39:06] 2025-11-23 04:38:34,857 | INFO     | transexitcode: 0
[2025-11-22 23:39:06] 2025-11-23 04:38:34,857 | INFO     | exeerrorcode: 0
[2025-11-22 23:39:06] 2025-11-23 04:38:34,857 | INFO     | exeerrordiag: 
[2025-11-22 23:39:06] 2025-11-23 04:38:34,857 | INFO     | exitcode: 0
[2025-11-22 23:39:06] 2025-11-23 04:38:34,857 | INFO     | exitmsg: OK
[2025-11-22 23:39:06] 2025-11-23 04:38:34,858 | INFO     | cpuconsumptiontime: 353124 s
[2025-11-22 23:39:06] 2025-11-23 04:38:34,858 | INFO     | nevents: 1000
[2025-11-22 23:39:06] 2025-11-23 04:38:34,858 | INFO     | neventsw: 0
[2025-11-22 23:39:06] 2025-11-23 04:38:34,858 | INFO     | pid: 24640
[2025-11-22 23:39:06] 2025-11-23 04:38:34,858 | INFO     | pgrp: 24640
[2025-11-22 23:39:06] 2025-11-23 04:38:34,859 | INFO     | corecount: 8
[2025-11-22 23:39:06] 2025-11-23 04:38:34,859 | INFO     | event service: False
[2025-11-22 23:39:06] 2025-11-23 04:38:34,859 | INFO     | sizes: {0: 2298802, 1: 2298802, 6: 2299092, 11: 2299120, 45628: 2345267, 45633: 2354261, 45635: 2354445, 45642: 2354691}
[2025-11-22 23:39:06] 2025-11-23 04:38:34,859 | INFO     | --------------------------------------------------
[2025-11-22 23:39:06] 2025-11-23 04:38:34,859 | INFO     | 
[2025-11-22 23:39:06] 2025-11-23 04:38:34,859 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 23:39:06] 2025-11-23 04:38:34,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,889 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,889 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,889 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:39:06] 2025-11-23 04:38:34,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:39:06] 2025-11-23 04:38:34,893 | INFO     | job 6895328673 has completed (purged errors)
[2025-11-22 23:39:06] 2025-11-23 04:38:34,893 | INFO     | overall cleanup function is called
[2025-11-22 23:39:06] 2025-11-23 04:38:35,909 | INFO     | --- collectZombieJob: --- 10, [24640]
[2025-11-22 23:39:06] 2025-11-23 04:38:35,909 | INFO     | zombie collector waiting for pid 24640
[2025-11-22 23:39:06] 2025-11-23 04:38:35,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:39:06] 2025-11-23 04:38:35,909 | INFO     | collected zombie processes
[2025-11-22 23:39:06] 2025-11-23 04:38:35,909 | INFO     | will attempt to kill all subprocesses of pid=24640
[2025-11-22 23:39:06] 2025-11-23 04:38:35,999 | INFO     | process IDs to be killed: [24640] (in reverse order)
[2025-11-22 23:39:06] 2025-11-23 04:38:36,057 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:39:06] 2025-11-23 04:38:36,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:39:06] 2025-11-23 04:38:36,062 | INFO     | did not find any defunct processes belonging to 24640
[2025-11-22 23:39:06] 2025-11-23 04:38:36,065 | INFO     | did not find any defunct processes belonging to 24640
[2025-11-22 23:39:06] 2025-11-23 04:38:36,068 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:39:06] 2025-11-23 04:38:36,068 | INFO     | ready for new job
[2025-11-22 23:39:06] 2025-11-23 04:38:36,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:39:06] 2025-11-23 04:38:36,072 | INFO     | ***************************************
[2025-11-22 23:39:06] 2025-11-23 04:38:36,072 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:39:06] 2025-11-23 04:38:36,072 | INFO     | ***************************************
[2025-11-22 23:39:06] 2025-11-23 04:38:36,072 | INFO     | 
[2025-11-22 23:39:06] 2025-11-23 04:38:36,073 | INFO     | architecture information:
[2025-11-22 23:39:06] 2025-11-23 04:38:36,074 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:39:06] 2025-11-23 04:38:36,091 | INFO     | cat /etc/os-release:
[2025-11-22 23:39:06] NAME="CentOS Linux"
[2025-11-22 23:39:06] VERSION="7 (Core)"
[2025-11-22 23:39:06] ID="centos"
[2025-11-22 23:39:06] ID_LIKE="rhel fedora"
[2025-11-22 23:39:06] VERSION_ID="7"
[2025-11-22 23:39:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:39:06] ANSI_COLOR="0;31"
[2025-11-22 23:39:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:39:06] HOME_URL="https://www.centos.org/"
[2025-11-22 23:39:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:39:06] 
[2025-11-22 23:39:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:39:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:39:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:39:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:39:06] 
[2025-11-22 23:39:06] 2025-11-23 04:38:36,092 | INFO     | ***************************************
[2025-11-22 23:39:06] 2025-11-23 04:38:36,595 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 23:39:06] 2025-11-23 04:38:36,616 | INFO     | sufficient remaining disk space (17472421888 B)
[2025-11-22 23:39:06] 2025-11-23 04:38:36,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:39:06] 2025-11-23 04:38:36,616 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:39:06] 2025-11-23 04:38:36,617 | INFO     | update_server=False
[2025-11-22 23:39:06] 2025-11-23 04:38:36,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:39:06] 2025-11-23 04:38:36,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:39:06] 2025-11-23 04:38:36,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:39:06] 2025-11-23 04:38:36,728 | INFO     | all payload control threads have been joined
[2025-11-22 23:39:06] 2025-11-23 04:38:36,916 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 23:39:06] 2025-11-23 04:38:36,917 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 23:39:06] 2025-11-23 04:38:36,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:39:06] 2025-11-23 04:38:36,917 | INFO     | will abort loop
[2025-11-22 23:39:06] 2025-11-23 04:38:37,197 | INFO     | all data control threads have been joined
[2025-11-22 23:39:06] 2025-11-23 04:38:37,623 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:37,623 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:37,733 | INFO     | [payload] control thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:37,796 | INFO     | all job control threads have been joined
[2025-11-22 23:39:06] 2025-11-23 04:38:37,920 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:38,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:38,203 | INFO     | [data] control thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:38,272 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:38,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:39:06] 2025-11-23 04:38:38,363 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:38,375 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:38,574 | INFO     | [job] validate thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:38,592 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:38,623 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:38,801 | INFO     | [job] control thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:38,862 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:38,896 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:42,315 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:39:06] 2025-11-23 04:38:50,845 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:39:06] 2025-11-23 04:38:50,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267353610048)>', '<ExcThread(monitor, started 140266233124608)>']
[2025-11-22 23:39:06] 2025-11-23 04:38:55,978 | INFO     | all workflow threads have been joined
[2025-11-22 23:39:06] 2025-11-23 04:38:55,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:39:06] 2025-11-23 04:38:55,979 | INFO     | traces error code: 0
[2025-11-22 23:39:06] 2025-11-23 04:38:55,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:39:06] 2025-11-23 04:39:06,348 | INFO     | PID=18171 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 23:39:06] 2025-11-23 04:39:06,349 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:39:06] 2025-11-23 04:39:06,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:39:06] 2025-11-23 04:39:06,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:39:06] 2025-11-23 04:39:06,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:39:06] 2025-11-23 04:39:06,349 | INFO     | [monitor] control thread has ended
[2025-11-22 23:39:06] 2025-11-23 04:39:06,463 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:39:06] 2025-11-23 04:39:06,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:39:06] 2025-11-23 04:39:06,471 [wrapper] pilotpid: 18171
[2025-11-22 23:39:06] 2025-11-23 04:39:06,476 [wrapper] Pilot exit status: 0
[2025-11-22 23:39:06] 2025-11-23 04:39:06,494 [wrapper] pandaids: 6895328673
[2025-11-22 23:39:06] 2025-11-23 04:39:06,537 [wrapper] cleanup supervisor_pilot 19190 18172
[2025-11-22 23:39:06] 2025-11-23 04:39:06,541 [wrapper] Test setup, not cleaning
[2025-11-22 23:39:06] 2025-11-23 04:39:06,546 [wrapper] apfmon messages muted
[2025-11-22 23:39:06] 2025-11-23 04:39:06,551 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:39:06] 2025-11-23 04:39:06,555 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:39:06]  *** Error codes and diagnostics ***
[2025-11-22 23:39:06]     "exeErrorCode": 0,
[2025-11-22 23:39:06]     "exeErrorDiag": "",
[2025-11-22 23:39:06]     "pilotErrorCode": 0,
[2025-11-22 23:39:06]     "pilotErrorDiag": "",
[2025-11-22 23:39:06]  *** Listing of results directory ***
[2025-11-22 23:39:06] total 1318800
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 12:05 pilot3.tar.gz
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 12:46 queuedata.json
[2025-11-22 23:39:06] -rwx------ 1 boincer umatlas     36292 Nov 21 12:48 runpilot2-wrapper.sh
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas       100 Nov 22 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:39:06] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 10:57 run_atlas
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas       105 Nov 22 10:57 job.xml
[2025-11-22 23:39:06] -rw-r--r-- 2 boincer umatlas 408209242 Nov 22 10:57 EVNT.47483658._000085.pool.root.1
[2025-11-22 23:39:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 10:57 start_atlas.sh
[2025-11-22 23:39:06] drwxrwx--x 2 boincer umatlas      4096 Nov 22 10:57 shared
[2025-11-22 23:39:06] -rw-r--r-- 2 boincer umatlas    590102 Nov 22 10:57 input.tar.gz
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas         0 Nov 22 10:57 boinc_lockfile
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas      2783 Nov 22 10:57 pandaJob.out
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas        57 Nov 22 10:57 setup.sh.local
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas    989768 Nov 22 10:57 agis_schedconf.cvmfs.json
[2025-11-22 23:39:06] drwx------ 5 boincer umatlas      4096 Nov 22 10:57 pilot3
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas       532 Nov 22 23:26 boinc_task_state.xml
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas      5911 Nov 22 23:36 init_data.xml
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas 921753772 Nov 22 23:37 HITS.47556137._000844.pool.root.1
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas      1062 Nov 22 23:38 memory_monitor_summary.json
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas   1526164 Nov 22 23:38 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas   1998840 Nov 22 23:38 log.47556137._000844.job.log.tgz.1
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas      8653 Nov 22 23:38 heartbeat.json
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 23:38 boinc_mmap_file
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas        29 Nov 22 23:38 wrapper_checkpoint.txt
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas        95 Nov 22 23:39 pilot_heartbeat.json
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas       745 Nov 22 23:39 pilotlog.txt
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas   6282284 Nov 22 23:39 log.47556137._000844.job.log.1
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas       353 Nov 22 23:39 output.list
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas       620 Nov 22 23:39 runtime_log
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas   8304640 Nov 22 23:39 result.tar.gz
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas       667 Nov 22 23:39 TuINDmvPkg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQbJKDmbHEjmn.diag
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas      9338 Nov 22 23:39 runtime_log.err
[2025-11-22 23:39:06] -rw-r--r-- 1 boincer umatlas     21299 Nov 22 23:39 stderr.txt
[2025-11-22 23:39:06] HITS file was successfully produced:
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas 921753772 Nov 22 23:37 shared/HITS.pool.root.1
[2025-11-22 23:39:06]  *** Contents of shared directory: ***
[2025-11-22 23:39:06] total 1307512
[2025-11-22 23:39:06] -rw-r--r-- 2 boincer umatlas 408209242 Nov 22 10:57 ATLAS.root_0
[2025-11-22 23:39:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 10:57 start_atlas.sh
[2025-11-22 23:39:06] -rw-r--r-- 2 boincer umatlas    590102 Nov 22 10:57 input.tar.gz
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas 921753772 Nov 22 23:37 HITS.pool.root.1
[2025-11-22 23:39:06] -rw------- 1 boincer umatlas   8304640 Nov 22 23:39 result.tar.gz
23:39:07 (14130): run_atlas exited; CPU time 348346.027549
23:39:07 (14130): called boinc_finish(0)

</stderr_txt>
]]>

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