Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:53:09 (23569): wrapper (7.7.26015): starting
10:53:09 (23569): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 10:53:09] Arguments: --nthreads 12
[2025-11-22 10:53:09] Threads: 12
[2025-11-22 10:53:09] Checking for CVMFS
[2025-11-22 10:53:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 10:53:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 10:53:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 10:53:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 10:53:09] 2.11.2.0 2933 282127 92292 153176 2 82 12342429 20275201 1 130560 2 126406012 99.962 17008135 14602 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 10:53:09] CVMFS is ok
[2025-11-22 10:53:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 10:53:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 10:53:09] Further information can be found at the LHC@home message board.
[2025-11-22 10:53:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 10:53:09] Checking for apptainer binary...
[2025-11-22 10:53:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 10:53:09] Running /usr/bin/apptainer --version
[2025-11-22 10:53:09] apptainer version 1.3.2-1.el7
[2025-11-22 10:53:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 10:53:11] c-205-15.aglt2.org
[2025-11-22 10:53:11] apptainer works
[2025-11-22 10:53:11] Set ATHENA_PROC_NUMBER=12
[2025-11-22 10:53:11] Set ATHENA_CORE_NUMBER=12
[2025-11-22 10:53:11] Starting ATLAS job with PandaID=6895328342
[2025-11-22 10:53:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 18:03:14]  *** The last 200 lines of the pilot log: ***
[2025-11-22 18:03:14] 2025-11-22 23:02:38,683 | INFO     | monitor loop #1918: job 0:6895328342 is in state 'finished'
[2025-11-22 18:03:14] 2025-11-22 23:02:38,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 18:03:14] 2025-11-22 23:02:39,256 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 18:03:14] 2025-11-22 23:02:39,260 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2025-11-22 18:03:14] 2025-11-22 23:02:39,263 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895328342/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 18:03:14] 2025-11-22 23:02:39,264 | INFO     | extracted standard info from prmon json
[2025-11-22 18:03:14] 2025-11-22 23:02:39,264 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 18:03:14] 2025-11-22 23:02:39,264 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 18:03:14] 2025-11-22 23:02:39,272 | INFO     | fitting pss+swap vs Time
[2025-11-22 18:03:14] 2025-11-22 23:02:39,272 | INFO     | sum of square deviations: 23303052244.80574
[2025-11-22 18:03:14] 2025-11-22 23:02:39,276 | INFO     | sum of deviations: 370542648572.6676
[2025-11-22 18:03:14] 2025-11-22 23:02:39,276 | INFO     | mean x: 1763839675.7867298
[2025-11-22 18:03:14] 2025-11-22 23:02:39,276 | INFO     | mean y: 3426776.440758294
[2025-11-22 18:03:14] 2025-11-22 23:02:39,277 | INFO     | intersect: -28043449583.682964
[2025-11-22 18:03:14] 2025-11-22 23:02:39,277 | INFO     | chi2: 5.866332343366929
[2025-11-22 18:03:14] 2025-11-22 23:02:39,278 | INFO     | sum of square deviations: 22484552871.88985
[2025-11-22 18:03:14] 2025-11-22 23:02:39,281 | INFO     | sum of deviations: 537856233236.048
[2025-11-22 18:03:14] 2025-11-22 23:02:39,281 | INFO     | mean x: 1763839523.2901678
[2025-11-22 18:03:14] 2025-11-22 23:02:39,281 | INFO     | mean y: 3457936.743405276
[2025-11-22 18:03:14] 2025-11-22 23:02:39,282 | INFO     | intersect: -42189601780.07976
[2025-11-22 18:03:14] 2025-11-22 23:02:39,282 | INFO     | chi2: 2.6607533893969304
[2025-11-22 18:03:14] 2025-11-22 23:02:39,282 | INFO     | current chi2=2.6607533893969304 (change=54.643664326221675 %)
[2025-11-22 18:03:14] 2025-11-22 23:02:39,283 | INFO     | sum of square deviations: 21685449211.463547
[2025-11-22 18:03:14] 2025-11-22 23:02:39,286 | INFO     | sum of deviations: 572824138400.3636
[2025-11-22 18:03:14] 2025-11-22 23:02:39,287 | INFO     | mean x: 1763839370.7936893
[2025-11-22 18:03:14] 2025-11-22 23:02:39,287 | INFO     | mean y: 3464561.0631067962
[2025-11-22 18:03:14] 2025-11-22 23:02:39,287 | INFO     | intersect: -46588596225.82732
[2025-11-22 18:03:14] 2025-11-22 23:02:39,287 | INFO     | chi2: 2.2804467124358756
[2025-11-22 18:03:14] 2025-11-22 23:02:39,287 | INFO     | current chi2=2.2804467124358756 (change=14.293195245999582 %)
[2025-11-22 18:03:14] 2025-11-22 23:02:39,288 | INFO     | right removable region: 411
[2025-11-22 18:03:14] 2025-11-22 23:02:39,288 | INFO     | sum of square deviations: 22484479061.889854
[2025-11-22 18:03:14] 2025-11-22 23:02:39,292 | INFO     | sum of deviations: 241231548579.602
[2025-11-22 18:03:14] 2025-11-22 23:02:39,292 | INFO     | mean x: 1763839828.2901678
[2025-11-22 18:03:14] 2025-11-22 23:02:39,292 | INFO     | mean y: 3450781.829736211
[2025-11-22 18:03:14] 2025-11-22 23:02:39,292 | INFO     | intersect: -18920439429.44088
[2025-11-22 18:03:14] 2025-11-22 23:02:39,293 | INFO     | chi2: 3.7429589570239368
[2025-11-22 18:03:14] 2025-11-22 23:02:39,293 | INFO     | current chi2=3.7429589570239368 (change=36.19592723456751 %)
[2025-11-22 18:03:14] 2025-11-22 23:02:39,293 | INFO     | sum of square deviations: 21685326784.04869
[2025-11-22 18:03:14] 2025-11-22 23:02:39,297 | INFO     | sum of deviations: 210185234093.63583
[2025-11-22 18:03:14] 2025-11-22 23:02:39,297 | INFO     | mean x: 1763839980.7912621
[2025-11-22 18:03:14] 2025-11-22 23:02:39,297 | INFO     | mean y: 3456700.0655339807
[2025-11-22 18:03:14] 2025-11-22 23:02:39,297 | INFO     | intersect: -17092578926.154758
[2025-11-22 18:03:14] 2025-11-22 23:02:39,298 | INFO     | chi2: 3.6986590997853837
[2025-11-22 18:03:14] 2025-11-22 23:02:39,298 | INFO     | current chi2=3.6986590997853837 (change=1.1835517767412649 %)
[2025-11-22 18:03:14] 2025-11-22 23:02:39,298 | INFO     | left removable region: 20
[2025-11-22 18:03:14] 2025-11-22 23:02:39,299 | INFO     | sum of square deviations: 18535595623.58565
[2025-11-22 18:03:14] 2025-11-22 23:02:39,302 | INFO     | sum of deviations: 369933930852.1636
[2025-11-22 18:03:14] 2025-11-22 23:02:39,302 | INFO     | mean x: 1763839950.2966752
[2025-11-22 18:03:14] 2025-11-22 23:02:39,302 | INFO     | mean y: 3503899.895140665
[2025-11-22 18:03:14] 2025-11-22 23:02:39,302 | INFO     | intersect: -35199262682.74727
[2025-11-22 18:03:14] 2025-11-22 23:02:39,303 | INFO     | chi2: 0.06392757351518483
[2025-11-22 18:03:14] 2025-11-22 23:02:39,303 | INFO     | current memory leak: 19.96 B/s (using 391 data points, chi2=0.06)
[2025-11-22 18:03:14] 2025-11-22 23:02:39,303 | INFO     | could have reported an average CPU frequency of 2399 MHz (18 samples)
[2025-11-22 18:03:14] 2025-11-22 23:02:39,303 | INFO     | ..............................
[2025-11-22 18:03:14] 2025-11-22 23:02:39,303 | INFO     | . Timing measurements:
[2025-11-22 18:03:14] 2025-11-22 23:02:39,303 | INFO     | . get job = 0 s
[2025-11-22 18:03:14] 2025-11-22 23:02:39,304 | INFO     | . initial setup = 3 s
[2025-11-22 18:03:14] 2025-11-22 23:02:39,304 | INFO     | . payload setup = 7 s
[2025-11-22 18:03:14] 2025-11-22 23:02:39,304 | INFO     | . stage-in = 0 s
[2025-11-22 18:03:14] 2025-11-22 23:02:39,304 | INFO     | . payload execution = 25716 s
[2025-11-22 18:03:14] 2025-11-22 23:02:39,304 | INFO     | . stage-out = 3 s
[2025-11-22 18:03:14] 2025-11-22 23:02:39,304 | INFO     | . log creation = 0 s
[2025-11-22 18:03:14] 2025-11-22 23:02:39,304 | INFO     | ..............................
[2025-11-22 18:03:14] 2025-11-22 23:02:39,385 | INFO     | 
[2025-11-22 18:03:14] 2025-11-22 23:02:39,385 | INFO     | job summary report
[2025-11-22 18:03:14] 2025-11-22 23:02:39,386 | INFO     | --------------------------------------------------
[2025-11-22 18:03:14] 2025-11-22 23:02:39,386 | INFO     | PanDA job id: 6895328342
[2025-11-22 18:03:14] 2025-11-22 23:02:39,386 | INFO     | task id: 47556137
[2025-11-22 18:03:14] 2025-11-22 23:02:39,386 | INFO     | errors: (none)
[2025-11-22 18:03:14] 2025-11-22 23:02:39,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 18:03:14] 2025-11-22 23:02:39,386 | INFO     | pilot state: finished 
[2025-11-22 18:03:14] 2025-11-22 23:02:39,387 | INFO     | transexitcode: 0
[2025-11-22 18:03:14] 2025-11-22 23:02:39,387 | INFO     | exeerrorcode: 0
[2025-11-22 18:03:14] 2025-11-22 23:02:39,387 | INFO     | exeerrordiag: 
[2025-11-22 18:03:14] 2025-11-22 23:02:39,387 | INFO     | exitcode: 0
[2025-11-22 18:03:14] 2025-11-22 23:02:39,387 | INFO     | exitmsg: OK
[2025-11-22 18:03:14] 2025-11-22 23:02:39,387 | INFO     | cpuconsumptiontime: 296079 s
[2025-11-22 18:03:14] 2025-11-22 23:02:39,388 | INFO     | nevents: 1000
[2025-11-22 18:03:14] 2025-11-22 23:02:39,388 | INFO     | neventsw: 0
[2025-11-22 18:03:14] 2025-11-22 23:02:39,388 | INFO     | pid: 1192
[2025-11-22 18:03:14] 2025-11-22 23:02:39,388 | INFO     | pgrp: 1192
[2025-11-22 18:03:14] 2025-11-22 23:02:39,388 | INFO     | corecount: 12
[2025-11-22 18:03:14] 2025-11-22 23:02:39,388 | INFO     | event service: False
[2025-11-22 18:03:14] 2025-11-22 23:02:39,389 | INFO     | sizes: {0: 2298803, 5: 2299065, 11: 2299121, 25726: 2336328, 25727: 2336327, 25730: 2345561, 25736: 2345751}
[2025-11-22 18:03:14] 2025-11-22 23:02:39,389 | INFO     | --------------------------------------------------
[2025-11-22 18:03:14] 2025-11-22 23:02:39,389 | INFO     | 
[2025-11-22 18:03:14] 2025-11-22 23:02:39,389 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 18:03:14] 2025-11-22 23:02:39,413 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,416 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 18:03:14] 2025-11-22 23:02:39,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 18:03:14] 2025-11-22 23:02:39,416 | INFO     | job 6895328342 has completed (purged errors)
[2025-11-22 18:03:14] 2025-11-22 23:02:39,417 | INFO     | overall cleanup function is called
[2025-11-22 18:03:14] 2025-11-22 23:02:40,433 | INFO     | --- collectZombieJob: --- 10, [1192]
[2025-11-22 18:03:14] 2025-11-22 23:02:40,433 | INFO     | zombie collector waiting for pid 1192
[2025-11-22 18:03:14] 2025-11-22 23:02:40,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 18:03:14] 2025-11-22 23:02:40,434 | INFO     | collected zombie processes
[2025-11-22 18:03:14] 2025-11-22 23:02:40,434 | INFO     | will attempt to kill all subprocesses of pid=1192
[2025-11-22 18:03:14] 2025-11-22 23:02:40,526 | INFO     | process IDs to be killed: [1192] (in reverse order)
[2025-11-22 18:03:14] 2025-11-22 23:02:40,579 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 18:03:14] 2025-11-22 23:02:40,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 18:03:14] 2025-11-22 23:02:40,583 | INFO     | did not find any defunct processes belonging to 1192
[2025-11-22 18:03:14] 2025-11-22 23:02:40,586 | INFO     | did not find any defunct processes belonging to 1192
[2025-11-22 18:03:14] 2025-11-22 23:02:40,588 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 18:03:14] 2025-11-22 23:02:40,588 | INFO     | ready for new job
[2025-11-22 18:03:14] 2025-11-22 23:02:40,588 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 18:03:14] 2025-11-22 23:02:40,590 | INFO     | ***************************************
[2025-11-22 18:03:14] 2025-11-22 23:02:40,590 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 18:03:14] 2025-11-22 23:02:40,591 | INFO     | ***************************************
[2025-11-22 18:03:14] 2025-11-22 23:02:40,591 | INFO     | 
[2025-11-22 18:03:14] 2025-11-22 23:02:40,591 | INFO     | architecture information:
[2025-11-22 18:03:14] 2025-11-22 23:02:40,592 | INFO     | executing command: cat /etc/os-release
[2025-11-22 18:03:14] 2025-11-22 23:02:40,608 | INFO     | cat /etc/os-release:
[2025-11-22 18:03:14] NAME="CentOS Linux"
[2025-11-22 18:03:14] VERSION="7 (Core)"
[2025-11-22 18:03:14] ID="centos"
[2025-11-22 18:03:14] ID_LIKE="rhel fedora"
[2025-11-22 18:03:14] VERSION_ID="7"
[2025-11-22 18:03:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 18:03:14] ANSI_COLOR="0;31"
[2025-11-22 18:03:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 18:03:14] HOME_URL="https://www.centos.org/"
[2025-11-22 18:03:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 18:03:14] 
[2025-11-22 18:03:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 18:03:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 18:03:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 18:03:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 18:03:14] 
[2025-11-22 18:03:14] 2025-11-22 23:02:40,608 | INFO     | ***************************************
[2025-11-22 18:03:14] 2025-11-22 23:02:41,111 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 18:03:14] 2025-11-22 23:02:41,128 | INFO     | sufficient remaining disk space (28247588864 B)
[2025-11-22 18:03:14] 2025-11-22 23:02:41,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 18:03:14] 2025-11-22 23:02:41,129 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 18:03:14] 2025-11-22 23:02:41,129 | INFO     | update_server=False
[2025-11-22 18:03:14] 2025-11-22 23:02:41,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 18:03:14] 2025-11-22 23:02:41,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:03:14] 2025-11-22 23:02:41,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 18:03:14] 2025-11-22 23:02:41,187 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 18:03:14] 2025-11-22 23:02:41,187 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 18:03:14] 2025-11-22 23:02:41,187 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:03:14] 2025-11-22 23:02:41,187 | INFO     | will abort loop
[2025-11-22 18:03:14] 2025-11-22 23:02:41,267 | INFO     | all job control threads have been joined
[2025-11-22 18:03:14] 2025-11-22 23:02:41,661 | INFO     | all data control threads have been joined
[2025-11-22 18:03:14] 2025-11-22 23:02:42,134 | INFO     | [job] retrieve thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:42,135 | INFO     | [job] queue monitor thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:42,193 | INFO     | [job] job monitor thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:42,273 | INFO     | [job] control thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:42,321 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:42,632 | INFO     | all payload control threads have been joined
[2025-11-22 18:03:14] 2025-11-22 23:02:42,666 | INFO     | [data] control thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:42,725 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:42,746 | INFO     | [job] validate thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:42,858 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:43,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:43,094 | INFO     | [payload] failed_post thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:43,135 | INFO     | [data] copytool_out thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:43,301 | INFO     | [payload] validate_post thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:43,342 | INFO     | [data] copytool_in thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:43,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 18:03:14] 2025-11-22 23:02:43,635 | INFO     | [payload] control thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:02:47,486 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 18:03:14] 2025-11-22 23:03:08,080 | INFO     | [monitor] cgroup control has ended
[2025-11-22 18:03:14] 2025-11-22 23:03:08,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140147666147136)>', '<ExcThread(monitor, started 140146762561280)>']
[2025-11-22 18:03:14] 2025-11-22 23:03:11,615 | INFO     | PID=27249 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 18:03:14] 2025-11-22 23:03:11,615 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 18:03:14] 2025-11-22 23:03:11,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 18:03:14] 2025-11-22 23:03:11,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 18:03:14] 2025-11-22 23:03:11,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 18:03:14] 2025-11-22 23:03:11,616 | INFO     | [monitor] control thread has ended
[2025-11-22 18:03:14] 2025-11-22 23:03:13,973 | INFO     | all workflow threads have been joined
[2025-11-22 18:03:14] 2025-11-22 23:03:13,976 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 18:03:14] 2025-11-22 23:03:13,976 | INFO     | traces error code: 0
[2025-11-22 18:03:14] 2025-11-22 23:03:13,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 18:03:14] 2025-11-22 23:03:14,064 [wrapper] ==== pilot stdout END ====
[2025-11-22 18:03:14] 2025-11-22 23:03:14,068 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 18:03:14] 2025-11-22 23:03:14,072 [wrapper] pilotpid: 27249
[2025-11-22 18:03:14] 2025-11-22 23:03:14,076 [wrapper] Pilot exit status: 0
[2025-11-22 18:03:14] 2025-11-22 23:03:14,089 [wrapper] pandaids: 6895328342
[2025-11-22 18:03:14] 2025-11-22 23:03:14,128 [wrapper] cleanup supervisor_pilot 29847 27250
[2025-11-22 18:03:14] 2025-11-22 23:03:14,132 [wrapper] Test setup, not cleaning
[2025-11-22 18:03:14] 2025-11-22 23:03:14,136 [wrapper] apfmon messages muted
[2025-11-22 18:03:14] 2025-11-22 23:03:14,140 [wrapper] ==== wrapper stdout END ====
[2025-11-22 18:03:14] 2025-11-22 23:03:14,144 [wrapper] ==== wrapper stderr END ====
[2025-11-22 18:03:14]  *** Error codes and diagnostics ***
[2025-11-22 18:03:14]     "exeErrorCode": 0,
[2025-11-22 18:03:14]     "exeErrorDiag": "",
[2025-11-22 18:03:14]     "pilotErrorCode": 0,
[2025-11-22 18:03:14]     "pilotErrorDiag": "",
[2025-11-22 18:03:14]  *** Listing of results directory ***
[2025-11-22 18:03:14] total 1313720
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 11:59 pilot3.tar.gz
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 12:01 queuedata.json
[2025-11-22 18:03:14] -rwx------ 1 boincer umatlas     36292 Nov 21 12:02 runpilot2-wrapper.sh
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas       100 Nov 22 10:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 18:03:14] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 10:53 run_atlas
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas       105 Nov 22 10:53 job.xml
[2025-11-22 18:03:14] -rw-r--r-- 2 boincer umatlas 410482842 Nov 22 10:53 EVNT.47483658._000073.pool.root.1
[2025-11-22 18:03:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 10:53 start_atlas.sh
[2025-11-22 18:03:14] drwxrwx--x 2 boincer umatlas      4096 Nov 22 10:53 shared
[2025-11-22 18:03:14] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 10:53 input.tar.gz
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas         0 Nov 22 10:53 boinc_lockfile
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 10:53 pandaJob.out
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas        57 Nov 22 10:53 setup.sh.local
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas    989768 Nov 22 10:53 agis_schedconf.cvmfs.json
[2025-11-22 18:03:14] drwx------ 5 boincer umatlas      4096 Nov 22 10:53 pilot3
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas       533 Nov 22 17:53 boinc_task_state.xml
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas      5956 Nov 22 18:00 init_data.xml
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas 919316609 Nov 22 18:01 HITS.47556137._000724.pool.root.1
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas      1062 Nov 22 18:02 memory_monitor_summary.json
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas   1526164 Nov 22 18:02 agis_ddmendpoints.agis.ALL.json
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas   2170148 Nov 22 18:02 log.47556137._000724.job.log.tgz.1
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas      8661 Nov 22 18:02 heartbeat.json
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas        29 Nov 22 18:03 wrapper_checkpoint.txt
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 18:03 boinc_mmap_file
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas        95 Nov 22 18:03 pilot_heartbeat.json
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas      4932 Nov 22 18:03 pilotlog.txt
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas   3591269 Nov 22 18:03 log.47556137._000724.job.log.1
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas       353 Nov 22 18:03 output.list
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas       620 Nov 22 18:03 runtime_log
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas   5785600 Nov 22 18:03 result.tar.gz
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 18:03 runtime_log.err
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas       670 Nov 22 18:03 PA8KDmjhjg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpZJKDmPaWmDm.diag
[2025-11-22 18:03:14] -rw-r--r-- 1 boincer umatlas     21305 Nov 22 18:03 stderr.txt
[2025-11-22 18:03:14] HITS file was successfully produced:
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas 919316609 Nov 22 18:01 shared/HITS.pool.root.1
[2025-11-22 18:03:14]  *** Contents of shared directory: ***
[2025-11-22 18:03:14] total 1304888
[2025-11-22 18:03:14] -rw-r--r-- 2 boincer umatlas 410482842 Nov 22 10:53 ATLAS.root_0
[2025-11-22 18:03:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 10:53 start_atlas.sh
[2025-11-22 18:03:14] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 10:53 input.tar.gz
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas 919316609 Nov 22 18:01 HITS.pool.root.1
[2025-11-22 18:03:14] -rw------- 1 boincer umatlas   5785600 Nov 22 18:03 result.tar.gz
18:03:15 (23569): run_atlas exited; CPU time 290204.147180
18:03:15 (23569): called boinc_finish(0)

</stderr_txt>
]]>

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