Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:01:55 (1208824): wrapper (7.7.26015): starting
03:01:55 (1208824): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 03:01:55] Arguments: --nthreads 12
[2025-11-24 03:01:55] Threads: 12
[2025-11-24 03:01:55] Checking for CVMFS
[2025-11-24 03:01:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 03:01:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 03:01:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 03:01:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 03:01:55] 2.13.3.0 14095 3550 82660 153228 1 90 2921049 4097024 863 130560 0 2801755 99.991 119995 22001 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-24 03:01:55] CVMFS is ok
[2025-11-24 03:01:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 03:01:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 03:01:55] Further information can be found at the LHC@home message board.
[2025-11-24 03:01:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 03:01:55] Checking for apptainer binary...
[2025-11-24 03:01:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 03:01:55] Running /usr/bin/apptainer --version
[2025-11-24 03:01:55] apptainer version 1.4.4-1.el9
[2025-11-24 03:01:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 03:01:55] pckelar7.cern.ch
[2025-11-24 03:01:55] apptainer works
[2025-11-24 03:01:55] Set ATHENA_PROC_NUMBER=12
[2025-11-24 03:01:55] Set ATHENA_CORE_NUMBER=12
[2025-11-24 03:01:55] Starting ATLAS job with PandaID=6895328311
[2025-11-24 03:01:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 14:49:22]  *** The last 200 lines of the pilot log: ***
[2025-11-24 14:49:22] 2025-11-24 13:48:21,514 | INFO     | monitor loop #2979: job 0:6895328311 is in state 'finished'
[2025-11-24 14:49:22] 2025-11-24 13:48:21,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:49:22] 2025-11-24 13:48:22,708 | INFO     | time since job start (42376s) is within the limit (172800.0s)
[2025-11-24 14:49:22] 2025-11-24 13:48:23,165 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 14:49:22] 2025-11-24 13:48:23,170 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2808.55025
[2025-11-24 14:49:22] 2025-11-24 13:48:23,175 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6895328311/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 14:49:22] 2025-11-24 13:48:23,176 | INFO     | extracted standard info from prmon json
[2025-11-24 14:49:22] 2025-11-24 13:48:23,176 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 14:49:22] 2025-11-24 13:48:23,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 14:49:22] 2025-11-24 13:48:23,196 | INFO     | fitting pss+swap vs Time
[2025-11-24 14:49:22] 2025-11-24 13:48:23,197 | INFO     | sum of square deviations: 103646560201.21745
[2025-11-24 14:49:22] 2025-11-24 13:48:23,213 | INFO     | sum of deviations: 1856312213904.6113
[2025-11-24 14:49:22] 2025-11-24 13:48:23,213 | INFO     | mean x: 1763970894.4798272
[2025-11-24 14:49:22] 2025-11-24 13:48:23,213 | INFO     | mean y: 3591749.757925072
[2025-11-24 14:49:22] 2025-11-24 13:48:23,213 | INFO     | intersect: -31589166466.60865
[2025-11-24 14:49:22] 2025-11-24 13:48:23,214 | INFO     | chi2: 5.921268821221688
[2025-11-24 14:49:22] 2025-11-24 13:48:23,216 | INFO     | sum of square deviations: 101422660778.88245
[2025-11-24 14:49:22] 2025-11-24 13:48:23,231 | INFO     | sum of deviations: 2118980512789.715
[2025-11-24 14:49:22] 2025-11-24 13:48:23,232 | INFO     | mean x: 1763970741.9869375
[2025-11-24 14:49:22] 2025-11-24 13:48:23,232 | INFO     | mean y: 3609747.3018867923
[2025-11-24 14:49:22] 2025-11-24 13:48:23,232 | INFO     | intersect: -36850280682.082306
[2025-11-24 14:49:22] 2025-11-24 13:48:23,233 | INFO     | chi2: 3.116073544340726
[2025-11-24 14:49:22] 2025-11-24 13:48:23,233 | INFO     | current chi2=3.116073544340726 (change=47.37490158911902 %)
[2025-11-24 14:49:22] 2025-11-24 13:48:23,234 | INFO     | sum of square deviations: 99230766684.96342
[2025-11-24 14:49:22] 2025-11-24 13:48:23,249 | INFO     | sum of deviations: 2166636551679.3262
[2025-11-24 14:49:22] 2025-11-24 13:48:23,250 | INFO     | mean x: 1763970589.49269
[2025-11-24 14:49:22] 2025-11-24 13:48:23,250 | INFO     | mean y: 3613046.165204678
[2025-11-24 14:49:22] 2025-11-24 13:48:23,250 | INFO     | intersect: -38511489506.81472
[2025-11-24 14:49:22] 2025-11-24 13:48:23,251 | INFO     | chi2: 2.776957336092488
[2025-11-24 14:49:22] 2025-11-24 13:48:23,251 | INFO     | current chi2=2.776957336092488 (change=10.882805024423307 %)
[2025-11-24 14:49:22] 2025-11-24 13:48:23,251 | INFO     | right removable region: 683
[2025-11-24 14:49:22] 2025-11-24 13:48:23,252 | INFO     | sum of square deviations: 101422288069.85483
[2025-11-24 14:49:22] 2025-11-24 13:48:23,268 | INFO     | sum of deviations: 1597167650026.977
[2025-11-24 14:49:22] 2025-11-24 13:48:23,268 | INFO     | mean x: 1763971046.9854863
[2025-11-24 14:49:22] 2025-11-24 13:48:23,268 | INFO     | mean y: 3609491.497822932
[2025-11-24 14:49:22] 2025-11-24 13:48:23,268 | INFO     | intersect: -27774875350.896725
[2025-11-24 14:49:22] 2025-11-24 13:48:23,269 | INFO     | chi2: 3.4605636537322404
[2025-11-24 14:49:22] 2025-11-24 13:48:23,270 | INFO     | current chi2=3.4605636537322404 (change=41.557058829525495 %)
[2025-11-24 14:49:22] 2025-11-24 13:48:23,271 | INFO     | sum of square deviations: 99230231414.85387
[2025-11-24 14:49:22] 2025-11-24 13:48:23,286 | INFO     | sum of deviations: 1513189286559.7605
[2025-11-24 14:49:22] 2025-11-24 13:48:23,286 | INFO     | mean x: 1763971199.4853802
[2025-11-24 14:49:22] 2025-11-24 13:48:23,287 | INFO     | mean y: 3615331.826023392
[2025-11-24 14:49:22] 2025-11-24 13:48:23,287 | INFO     | intersect: -26895670125.868565
[2025-11-24 14:49:22] 2025-11-24 13:48:23,288 | INFO     | chi2: 3.368887063608979
[2025-11-24 14:49:22] 2025-11-24 13:48:23,288 | INFO     | current chi2=3.368887063608979 (change=2.6491808646371138 %)
[2025-11-24 14:49:22] 2025-11-24 13:48:23,288 | INFO     | left removable region: 20
[2025-11-24 14:49:22] 2025-11-24 13:48:23,289 | INFO     | sum of square deviations: 90368657156.99855
[2025-11-24 14:49:22] 2025-11-24 13:48:23,303 | INFO     | sum of deviations: 1696547747633.7627
[2025-11-24 14:49:22] 2025-11-24 13:48:23,304 | INFO     | mean x: 1763971168.9984918
[2025-11-24 14:49:22] 2025-11-24 13:48:23,304 | INFO     | mean y: 3645780.763197587
[2025-11-24 14:49:22] 2025-11-24 13:48:23,304 | INFO     | intersect: -33112496561.11204
[2025-11-24 14:49:22] 2025-11-24 13:48:23,305 | INFO     | chi2: 0.16243188210039314
[2025-11-24 14:49:22] 2025-11-24 13:48:23,305 | INFO     | current memory leak: 18.77 B/s (using 663 data points, chi2=0.16)
[2025-11-24 14:49:22] 2025-11-24 13:48:23,307 | INFO     | could have reported an average CPU frequency of 2803 MHz (26 samples)
[2025-11-24 14:49:22] 2025-11-24 13:48:23,307 | INFO     | ..............................
[2025-11-24 14:49:22] 2025-11-24 13:48:23,307 | INFO     | . Timing measurements:
[2025-11-24 14:49:22] 2025-11-24 13:48:23,307 | INFO     | . get job = 0 s
[2025-11-24 14:49:22] 2025-11-24 13:48:23,308 | INFO     | . initial setup = 1 s
[2025-11-24 14:49:22] 2025-11-24 13:48:23,308 | INFO     | . payload setup = 8 s
[2025-11-24 14:49:22] 2025-11-24 13:48:23,308 | INFO     | . stage-in = 0 s
[2025-11-24 14:49:22] 2025-11-24 13:48:23,308 | INFO     | . payload execution = 42334 s
[2025-11-24 14:49:22] 2025-11-24 13:48:23,308 | INFO     | . stage-out = 2 s
[2025-11-24 14:49:22] 2025-11-24 13:48:23,308 | INFO     | . log creation = 0 s
[2025-11-24 14:49:22] 2025-11-24 13:48:23,309 | INFO     | ..............................
[2025-11-24 14:49:22] 2025-11-24 13:48:23,620 | INFO     | 
[2025-11-24 14:49:22] 2025-11-24 13:48:23,621 | INFO     | job summary report
[2025-11-24 14:49:22] 2025-11-24 13:48:23,621 | INFO     | --------------------------------------------------
[2025-11-24 14:49:22] 2025-11-24 13:48:23,621 | INFO     | PanDA job id: 6895328311
[2025-11-24 14:49:22] 2025-11-24 13:48:23,621 | INFO     | task id: 47556137
[2025-11-24 14:49:22] 2025-11-24 13:48:23,621 | INFO     | errors: (none)
[2025-11-24 14:49:22] 2025-11-24 13:48:23,621 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 14:49:22] 2025-11-24 13:48:23,622 | INFO     | pilot state: finished 
[2025-11-24 14:49:22] 2025-11-24 13:48:23,622 | INFO     | transexitcode: 0
[2025-11-24 14:49:22] 2025-11-24 13:48:23,622 | INFO     | exeerrorcode: 0
[2025-11-24 14:49:22] 2025-11-24 13:48:23,622 | INFO     | exeerrordiag: 
[2025-11-24 14:49:22] 2025-11-24 13:48:23,622 | INFO     | exitcode: 0
[2025-11-24 14:49:22] 2025-11-24 13:48:23,622 | INFO     | exitmsg: OK
[2025-11-24 14:49:22] 2025-11-24 13:48:23,623 | INFO     | cpuconsumptiontime: 495394 s
[2025-11-24 14:49:22] 2025-11-24 13:48:23,623 | INFO     | nevents: 1000
[2025-11-24 14:49:22] 2025-11-24 13:48:23,623 | INFO     | neventsw: 0
[2025-11-24 14:49:22] 2025-11-24 13:48:23,623 | INFO     | pid: 1220130
[2025-11-24 14:49:22] 2025-11-24 13:48:23,623 | INFO     | pgrp: 1220130
[2025-11-24 14:49:22] 2025-11-24 13:48:23,623 | INFO     | corecount: 12
[2025-11-24 14:49:22] 2025-11-24 13:48:23,623 | INFO     | event service: False
[2025-11-24 14:49:22] 2025-11-24 13:48:23,624 | INFO     | sizes: {0: 2298632, 1: 2298831, 6: 2299093, 12: 2299121, 42346: 2341501, 42350: 2351286, 42353: 2351470, 42360: 2351716}
[2025-11-24 14:49:22] 2025-11-24 13:48:23,624 | INFO     | --------------------------------------------------
[2025-11-24 14:49:22] 2025-11-24 13:48:23,624 | INFO     | 
[2025-11-24 14:49:22] 2025-11-24 13:48:23,624 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-24 14:49:22] 2025-11-24 13:48:23,642 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,642 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,642 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,642 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,644 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,645 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 14:49:22] 2025-11-24 13:48:23,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 14:49:22] 2025-11-24 13:48:23,645 | INFO     | job 6895328311 has completed (purged errors)
[2025-11-24 14:49:22] 2025-11-24 13:48:23,646 | INFO     | overall cleanup function is called
[2025-11-24 14:49:22] 2025-11-24 13:48:24,667 | INFO     | --- collectZombieJob: --- 10, [1220130]
[2025-11-24 14:49:22] 2025-11-24 13:48:24,668 | INFO     | zombie collector waiting for pid 1220130
[2025-11-24 14:49:22] 2025-11-24 13:48:24,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 14:49:22] 2025-11-24 13:48:24,668 | INFO     | collected zombie processes
[2025-11-24 14:49:22] 2025-11-24 13:48:24,668 | INFO     | will attempt to kill all subprocesses of pid=1220130
[2025-11-24 14:49:22] 2025-11-24 13:48:24,852 | INFO     | process IDs to be killed: [1220130] (in reverse order)
[2025-11-24 14:49:22] 2025-11-24 13:48:24,909 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 14:49:22] 2025-11-24 13:48:24,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 14:49:22] 2025-11-24 13:48:24,916 | INFO     | did not find any defunct processes belonging to 1220130
[2025-11-24 14:49:22] 2025-11-24 13:48:24,921 | INFO     | did not find any defunct processes belonging to 1220130
[2025-11-24 14:49:22] 2025-11-24 13:48:24,923 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 14:49:22] 2025-11-24 13:48:24,923 | INFO     | ready for new job
[2025-11-24 14:49:22] 2025-11-24 13:48:24,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 14:49:22] 2025-11-24 13:48:24,927 | INFO     | ***************************************
[2025-11-24 14:49:22] 2025-11-24 13:48:24,928 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 14:49:22] 2025-11-24 13:48:24,928 | INFO     | ***************************************
[2025-11-24 14:49:22] 2025-11-24 13:48:24,928 | INFO     | 
[2025-11-24 14:49:22] 2025-11-24 13:48:24,929 | INFO     | architecture information:
[2025-11-24 14:49:22] 2025-11-24 13:48:24,930 | INFO     | executing command: cat /etc/os-release
[2025-11-24 14:49:22] 2025-11-24 13:48:24,945 | INFO     | cat /etc/os-release:
[2025-11-24 14:49:22] NAME="CentOS Linux"
[2025-11-24 14:49:22] VERSION="7 (Core)"
[2025-11-24 14:49:22] ID="centos"
[2025-11-24 14:49:22] ID_LIKE="rhel fedora"
[2025-11-24 14:49:22] VERSION_ID="7"
[2025-11-24 14:49:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 14:49:22] ANSI_COLOR="0;31"
[2025-11-24 14:49:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 14:49:22] HOME_URL="https://www.centos.org/"
[2025-11-24 14:49:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 14:49:22] 
[2025-11-24 14:49:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 14:49:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 14:49:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 14:49:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 14:49:22] 
[2025-11-24 14:49:22] 2025-11-24 13:48:24,945 | INFO     | ***************************************
[2025-11-24 14:49:22] 2025-11-24 13:48:25,449 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-24 14:49:22] 2025-11-24 13:48:25,465 | INFO     | sufficient remaining disk space (1784629166080 B)
[2025-11-24 14:49:22] 2025-11-24 13:48:25,465 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 14:49:22] 2025-11-24 13:48:25,466 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 14:49:22] 2025-11-24 13:48:25,466 | INFO     | update_server=False
[2025-11-24 14:49:22] 2025-11-24 13:48:25,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 14:49:22] 2025-11-24 13:48:25,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:49:22] 2025-11-24 13:48:25,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:49:22] 2025-11-24 13:48:25,467 | INFO     | aborting loop
[2025-11-24 14:49:22] 2025-11-24 13:48:25,661 | INFO     | all data control threads have been joined
[2025-11-24 14:49:22] 2025-11-24 13:48:25,671 | INFO     | all payload control threads have been joined
[2025-11-24 14:49:22] 2025-11-24 13:48:25,776 | INFO     | all job control threads have been joined
[2025-11-24 14:49:22] 2025-11-24 13:48:26,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 14:49:22] 2025-11-24 13:48:26,472 | INFO     | [job] retrieve thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:26,473 | INFO     | [job] queue monitor thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:26,473 | INFO     | [job] job monitor thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:26,478 | INFO     | [payload] validate_post thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:26,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 14:49:22] 2025-11-24 13:48:26,666 | INFO     | [data] control thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:26,677 | INFO     | [payload] control thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:26,782 | INFO     | [job] control thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:26,804 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:26,812 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:26,940 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:27,216 | INFO     | [job] validate thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:27,417 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:27,509 | INFO     | [payload] failed_post thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:27,551 | INFO     | [data] copytool_in thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:28,319 | INFO     | [data] copytool_out thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:30,542 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 14:49:22] 2025-11-24 13:48:56,016 | INFO     | PID=1212650 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 14:49:22] 2025-11-24 13:48:56,017 | INFO     | .. there are 2 such processes running
[2025-11-24 14:49:22] 2025-11-24 13:48:56,017 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 14:49:22] 2025-11-24 13:48:56,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 14:49:22] 2025-11-24 13:48:56,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 14:49:22] 2025-11-24 13:49:16,634 | INFO     | [monitor] cgroup control has ended
[2025-11-24 14:49:22] 2025-11-24 13:49:17,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678480910144)>', '<ExcThread(monitor, started 140677979543296)>']
[2025-11-24 14:49:22] 2025-11-24 13:49:18,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 14:49:22] 2025-11-24 13:49:18,128 | INFO     | [monitor] control thread has ended
[2025-11-24 14:49:22] 2025-11-24 13:49:22,394 | INFO     | all workflow threads have been joined
[2025-11-24 14:49:22] 2025-11-24 13:49:22,395 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 14:49:22] 2025-11-24 13:49:22,395 | INFO     | traces error code: 0
[2025-11-24 14:49:22] 2025-11-24 13:49:22,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 14:49:22] 2025-11-24 13:49:22,504 [wrapper] ==== pilot stdout END ====
[2025-11-24 14:49:22] 2025-11-24 13:49:22,507 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 14:49:22] 2025-11-24 13:49:22,509 [wrapper] pilotpid: 1212650
[2025-11-24 14:49:22] 2025-11-24 13:49:22,512 [wrapper] Pilot exit status: 0
[2025-11-24 14:49:22] 2025-11-24 13:49:22,522 [wrapper] pandaids: 6895328311
[2025-11-24 14:49:22] 2025-11-24 13:49:22,560 [wrapper] cleanup supervisor_pilot 1440490 1212651
[2025-11-24 14:49:22] 2025-11-24 13:49:22,563 [wrapper] Test setup, not cleaning
[2025-11-24 14:49:22] 2025-11-24 13:49:22,566 [wrapper] apfmon messages muted
[2025-11-24 14:49:22] 2025-11-24 13:49:22,569 [wrapper] ==== wrapper stdout END ====
[2025-11-24 14:49:22] 2025-11-24 13:49:22,572 [wrapper] ==== wrapper stderr END ====
[2025-11-24 14:49:22]  *** Error codes and diagnostics ***
[2025-11-24 14:49:22]     "exeErrorCode": 0,
[2025-11-24 14:49:22]     "exeErrorDiag": "",
[2025-11-24 14:49:22]     "pilotErrorCode": 0,
[2025-11-24 14:49:22]     "pilotErrorDiag": "",
[2025-11-24 14:49:22]  *** Listing of results directory ***
[2025-11-24 14:49:22] total 1311668
[2025-11-24 14:49:22] -rwx------ 1 boinc boinc     36292 Nov 21 17:49 runpilot2-wrapper.sh
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc      5112 Nov 21 17:49 queuedata.json
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc    576529 Nov 21 17:49 pilot3.tar.gz
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc       100 Nov 24 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 14:49:22] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 03:01 run_atlas
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc       105 Nov 24 03:01 job.xml
[2025-11-24 14:49:22] -rw-r--r-- 2 boinc boinc 409766489 Nov 24 03:01 EVNT.47483658._000070.pool.root.1
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc      6252 Nov 24 03:01 init_data.xml
[2025-11-24 14:49:22] -rw-r--r-- 2 boinc boinc     15847 Nov 24 03:01 start_atlas.sh
[2025-11-24 14:49:22] drwxrwx--x 2 boinc boinc      4096 Nov 24 03:01 shared
[2025-11-24 14:49:22] -rw-r--r-- 2 boinc boinc    590087 Nov 24 03:01 input.tar.gz
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc         0 Nov 24 03:01 boinc_lockfile
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc      2784 Nov 24 03:01 pandaJob.out
[2025-11-24 14:49:22] -rw------- 1 boinc boinc    989786 Nov 24 03:02 agis_schedconf.cvmfs.json
[2025-11-24 14:49:22] drwx------ 5 boinc boinc      4096 Nov 24 03:02 pilot3
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc       533 Nov 24 14:38 boinc_task_state.xml
[2025-11-24 14:49:22] -rw------- 1 boinc boinc 912968820 Nov 24 14:47 HITS.47556137._000693.pool.root.1
[2025-11-24 14:49:22] -rw------- 1 boinc boinc      1036 Nov 24 14:48 memory_monitor_summary.json
[2025-11-24 14:49:22] -rw------- 1 boinc boinc   1516227 Nov 24 14:48 agis_ddmendpoints.agis.ALL.json
[2025-11-24 14:49:22] -rw------- 1 boinc boinc   2383216 Nov 24 14:48 log.47556137._000693.job.log.tgz.1
[2025-11-24 14:49:22] -rw------- 1 boinc boinc        95 Nov 24 14:48 pilot_heartbeat.json
[2025-11-24 14:49:22] -rw------- 1 boinc boinc      7945 Nov 24 14:48 heartbeat.json
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc      8192 Nov 24 14:49 boinc_mmap_file
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc        29 Nov 24 14:49 wrapper_checkpoint.txt
[2025-11-24 14:49:22] -rw------- 1 boinc boinc      4825 Nov 24 14:49 pilotlog.txt
[2025-11-24 14:49:22] -rw------- 1 boinc boinc   5867084 Nov 24 14:49 log.47556137._000693.job.log.1
[2025-11-24 14:49:22] -rw------- 1 boinc boinc       353 Nov 24 14:49 output.list
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc       620 Nov 24 14:49 runtime_log
[2025-11-24 14:49:22] -rw------- 1 boinc boinc   8273920 Nov 24 14:49 result.tar.gz
[2025-11-24 14:49:22] -rw------- 1 boinc boinc       665 Nov 24 14:49 zs4NDmLVjg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIZJKDmizfnQm.diag
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc      8842 Nov 24 14:49 runtime_log.err
[2025-11-24 14:49:22] -rw-r--r-- 1 boinc boinc     21314 Nov 24 14:49 stderr.txt
[2025-11-24 14:49:22] HITS file was successfully produced:
[2025-11-24 14:49:22] -rw------- 1 boinc boinc 912968820 Nov 24 14:47 shared/HITS.pool.root.1
[2025-11-24 14:49:22]  *** Contents of shared directory: ***
[2025-11-24 14:49:22] total 1300420
[2025-11-24 14:49:22] -rw-r--r-- 2 boinc boinc 409766489 Nov 24 03:01 ATLAS.root_0
[2025-11-24 14:49:22] -rw-r--r-- 2 boinc boinc     15847 Nov 24 03:01 start_atlas.sh
[2025-11-24 14:49:22] -rw-r--r-- 2 boinc boinc    590087 Nov 24 03:01 input.tar.gz
[2025-11-24 14:49:22] -rw------- 1 boinc boinc 912968820 Nov 24 14:47 HITS.pool.root.1
[2025-11-24 14:49:22] -rw------- 1 boinc boinc   8273920 Nov 24 14:49 result.tar.gz
14:49:24 (1208824): run_atlas exited; CPU time 495649.224126
14:49:24 (1208824): called boinc_finish(0)

</stderr_txt>
]]>

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