Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:57:17 (9249): wrapper (7.7.26015): starting
10:57:17 (9249): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 10:57:17] Arguments: --nthreads 8
[2025-11-22 10:57:17] Threads: 8
[2025-11-22 10:57:17] Checking for CVMFS
[2025-11-22 10:57:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 10:57:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 10:57:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 10:57:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 10:57:18] 2.11.2.0 2918 136934 89548 153176 0 82 11152563 20275201 1 130560 0 51359829 99.933 6287151 34992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 10:57:18] CVMFS is ok
[2025-11-22 10:57:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 10:57:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 10:57:18] Further information can be found at the LHC@home message board.
[2025-11-22 10:57:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 10:57:18] Checking for apptainer binary...
[2025-11-22 10:57:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 10:57:18] Running /usr/bin/apptainer --version
[2025-11-22 10:57:18] apptainer version 1.3.2-1.el7
[2025-11-22 10:57:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 10:57:19] c-115-8.aglt2.org
[2025-11-22 10:57:19] apptainer works
[2025-11-22 10:57:19] Set ATHENA_PROC_NUMBER=8
[2025-11-22 10:57:19] Set ATHENA_CORE_NUMBER=8
[2025-11-22 10:57:19] Starting ATLAS job with PandaID=6895328303
[2025-11-22 10:57:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 22:03:48]  *** The last 200 lines of the pilot log: ***
[2025-11-22 22:03:48] 2025-11-23 03:03:04,896 | INFO     | time since job start (39928s) is within the limit (172800.0s)
[2025-11-22 22:03:48] 2025-11-23 03:03:06,211 | INFO     | monitor loop #2948: job 0:6895328303 is in state 'finished'
[2025-11-22 22:03:48] 2025-11-23 03:03:06,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:03:48] 2025-11-23 03:03:06,901 | INFO     | time since job start (39930s) is within the limit (172800.0s)
[2025-11-22 22:03:48] 2025-11-23 03:03:08,359 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 22:03:48] 2025-11-23 03:03:08,362 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-22 22:03:48] 2025-11-23 03:03:08,363 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895328303/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 22:03:48] 2025-11-23 03:03:08,364 | INFO     | extracted standard info from prmon json
[2025-11-22 22:03:48] 2025-11-23 03:03:08,364 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 22:03:48] 2025-11-23 03:03:08,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 22:03:48] 2025-11-23 03:03:08,374 | INFO     | fitting pss+swap vs Time
[2025-11-22 22:03:48] 2025-11-23 03:03:08,375 | INFO     | sum of square deviations: 86738479140.15887
[2025-11-22 22:03:48] 2025-11-23 03:03:08,383 | INFO     | sum of deviations: 617931042945.4479
[2025-11-22 22:03:48] 2025-11-23 03:03:08,383 | INFO     | mean x: 1763847004.1345565
[2025-11-22 22:03:48] 2025-11-23 03:03:08,383 | INFO     | mean y: 3111446.108562691
[2025-11-22 22:03:48] 2025-11-23 03:03:08,383 | INFO     | intersect: -12562659013.157457
[2025-11-22 22:03:48] 2025-11-23 03:03:08,384 | INFO     | chi2: 6.075413992266371
[2025-11-22 22:03:48] 2025-11-23 03:03:08,384 | INFO     | sum of square deviations: 84764364045.63045
[2025-11-22 22:03:48] 2025-11-23 03:03:08,392 | INFO     | sum of deviations: 852087315428.7896
[2025-11-22 22:03:48] 2025-11-23 03:03:08,392 | INFO     | mean x: 1763846851.6394453
[2025-11-22 22:03:48] 2025-11-23 03:03:08,392 | INFO     | mean y: 3129528.969183359
[2025-11-22 22:03:48] 2025-11-23 03:03:08,393 | INFO     | intersect: -17727806644.065826
[2025-11-22 22:03:48] 2025-11-23 03:03:08,393 | INFO     | chi2: 2.8899034869238345
[2025-11-22 22:03:48] 2025-11-23 03:03:08,393 | INFO     | current chi2=2.8899034869238345 (change=52.43281378680524 %)
[2025-11-22 22:03:48] 2025-11-23 03:03:08,394 | INFO     | sum of square deviations: 82820435563.56992
[2025-11-22 22:03:48] 2025-11-23 03:03:08,402 | INFO     | sum of deviations: 938132396790.1884
[2025-11-22 22:03:48] 2025-11-23 03:03:08,402 | INFO     | mean x: 1763846699.14441
[2025-11-22 22:03:48] 2025-11-23 03:03:08,402 | INFO     | mean y: 3136272.954968944
[2025-11-22 22:03:48] 2025-11-23 03:03:08,402 | INFO     | intersect: -19976494601.706444
[2025-11-22 22:03:48] 2025-11-23 03:03:08,403 | INFO     | chi2: 2.3536199810436518
[2025-11-22 22:03:48] 2025-11-23 03:03:08,403 | INFO     | current chi2=2.3536199810436518 (change=18.55714242038689 %)
[2025-11-22 22:03:48] 2025-11-23 03:03:08,403 | INFO     | right removable region: 643
[2025-11-22 22:03:48] 2025-11-23 03:03:08,404 | INFO     | sum of square deviations: 84764110895.63045
[2025-11-22 22:03:48] 2025-11-23 03:03:08,412 | INFO     | sum of deviations: 428847956342.6803
[2025-11-22 22:03:48] 2025-11-23 03:03:08,412 | INFO     | mean x: 1763847156.6394453
[2025-11-22 22:03:48] 2025-11-23 03:03:08,412 | INFO     | mean y: 3126023.8875192604
[2025-11-22 22:03:48] 2025-11-23 03:03:08,412 | INFO     | intersect: -8920724417.451408
[2025-11-22 22:03:48] 2025-11-23 03:03:08,413 | INFO     | chi2: 3.9321688089442173
[2025-11-22 22:03:48] 2025-11-23 03:03:08,413 | INFO     | current chi2=3.9321688089442173 (change=35.27735206276269 %)
[2025-11-22 22:03:48] 2025-11-23 03:03:08,413 | INFO     | sum of square deviations: 82820008320.14128
[2025-11-22 22:03:48] 2025-11-23 03:03:08,421 | INFO     | sum of deviations: 394079074139.2501
[2025-11-22 22:03:48] 2025-11-23 03:03:08,421 | INFO     | mean x: 1763847309.1413043
[2025-11-22 22:03:48] 2025-11-23 03:03:08,421 | INFO     | mean y: 3128749.3928571427
[2025-11-22 22:03:48] 2025-11-23 03:03:08,422 | INFO     | intersect: -8389714098.708744
[2025-11-22 22:03:48] 2025-11-23 03:03:08,422 | INFO     | chi2: 3.904171450812805
[2025-11-22 22:03:48] 2025-11-23 03:03:08,422 | INFO     | current chi2=3.904171450812805 (change=0.7120080416621124 %)
[2025-11-22 22:03:48] 2025-11-23 03:03:08,423 | INFO     | left removable region: 20
[2025-11-22 22:03:48] 2025-11-23 03:03:08,423 | INFO     | sum of square deviations: 74979623291.11081
[2025-11-22 22:03:48] 2025-11-23 03:03:08,431 | INFO     | sum of deviations: 670666700633.6658
[2025-11-22 22:03:48] 2025-11-23 03:03:08,431 | INFO     | mean x: 1763847278.6532905
[2025-11-22 22:03:48] 2025-11-23 03:03:08,431 | INFO     | mean y: 3159378.4799357946
[2025-11-22 22:03:48] 2025-11-23 03:03:08,431 | INFO     | intersect: -15773842197.044346
[2025-11-22 22:03:48] 2025-11-23 03:03:08,432 | INFO     | chi2: 0.0983089704698882
[2025-11-22 22:03:48] 2025-11-23 03:03:08,432 | INFO     | current memory leak: 8.94 B/s (using 623 data points, chi2=0.10)
[2025-11-22 22:03:48] 2025-11-23 03:03:08,432 | INFO     | could have reported an average CPU frequency of 2395 MHz (25 samples)
[2025-11-22 22:03:48] 2025-11-23 03:03:08,433 | INFO     | ..............................
[2025-11-22 22:03:48] 2025-11-23 03:03:08,433 | INFO     | . Timing measurements:
[2025-11-22 22:03:48] 2025-11-23 03:03:08,433 | INFO     | . get job = 0 s
[2025-11-22 22:03:48] 2025-11-23 03:03:08,433 | INFO     | . initial setup = 2 s
[2025-11-22 22:03:48] 2025-11-23 03:03:08,433 | INFO     | . payload setup = 8 s
[2025-11-22 22:03:48] 2025-11-23 03:03:08,433 | INFO     | . stage-in = 0 s
[2025-11-22 22:03:48] 2025-11-23 03:03:08,433 | INFO     | . payload execution = 39887 s
[2025-11-22 22:03:48] 2025-11-23 03:03:08,433 | INFO     | . stage-out = 3 s
[2025-11-22 22:03:48] 2025-11-23 03:03:08,434 | INFO     | . log creation = 0 s
[2025-11-22 22:03:48] 2025-11-23 03:03:08,434 | INFO     | ..............................
[2025-11-22 22:03:48] 2025-11-23 03:03:08,514 | INFO     | 
[2025-11-22 22:03:48] 2025-11-23 03:03:08,514 | INFO     | job summary report
[2025-11-22 22:03:48] 2025-11-23 03:03:08,514 | INFO     | --------------------------------------------------
[2025-11-22 22:03:48] 2025-11-23 03:03:08,514 | INFO     | PanDA job id: 6895328303
[2025-11-22 22:03:48] 2025-11-23 03:03:08,515 | INFO     | task id: 47556149
[2025-11-22 22:03:48] 2025-11-23 03:03:08,515 | INFO     | errors: (none)
[2025-11-22 22:03:48] 2025-11-23 03:03:08,515 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 22:03:48] 2025-11-23 03:03:08,515 | INFO     | pilot state: finished 
[2025-11-22 22:03:48] 2025-11-23 03:03:08,515 | INFO     | transexitcode: 0
[2025-11-22 22:03:48] 2025-11-23 03:03:08,515 | INFO     | exeerrorcode: 0
[2025-11-22 22:03:48] 2025-11-23 03:03:08,515 | INFO     | exeerrordiag: 
[2025-11-22 22:03:48] 2025-11-23 03:03:08,515 | INFO     | exitcode: 0
[2025-11-22 22:03:48] 2025-11-23 03:03:08,516 | INFO     | exitmsg: OK
[2025-11-22 22:03:48] 2025-11-23 03:03:08,516 | INFO     | cpuconsumptiontime: 309294 s
[2025-11-22 22:03:48] 2025-11-23 03:03:08,516 | INFO     | nevents: 1000
[2025-11-22 22:03:48] 2025-11-23 03:03:08,516 | INFO     | neventsw: 0
[2025-11-22 22:03:48] 2025-11-23 03:03:08,516 | INFO     | pid: 19401
[2025-11-22 22:03:48] 2025-11-23 03:03:08,516 | INFO     | pgrp: 19401
[2025-11-22 22:03:48] 2025-11-23 03:03:08,516 | INFO     | corecount: 8
[2025-11-22 22:03:48] 2025-11-23 03:03:08,516 | INFO     | event service: False
[2025-11-22 22:03:48] 2025-11-23 03:03:08,517 | INFO     | sizes: {0: 2298583, 1: 2298782, 6: 2299044, 11: 2299072, 39899: 2342604, 39904: 2351626, 39906: 2351810, 39915: 2352120}
[2025-11-22 22:03:48] 2025-11-23 03:03:08,517 | INFO     | --------------------------------------------------
[2025-11-22 22:03:48] 2025-11-23 03:03:08,517 | INFO     | 
[2025-11-22 22:03:48] 2025-11-23 03:03:08,517 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 22:03:48] 2025-11-23 03:03:08,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,546 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 22:03:48] 2025-11-23 03:03:08,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 22:03:48] 2025-11-23 03:03:08,550 | INFO     | job 6895328303 has completed (purged errors)
[2025-11-22 22:03:48] 2025-11-23 03:03:08,551 | INFO     | overall cleanup function is called
[2025-11-22 22:03:48] 2025-11-23 03:03:09,565 | INFO     | --- collectZombieJob: --- 10, [19401]
[2025-11-22 22:03:48] 2025-11-23 03:03:09,565 | INFO     | zombie collector waiting for pid 19401
[2025-11-22 22:03:48] 2025-11-23 03:03:09,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 22:03:48] 2025-11-23 03:03:09,566 | INFO     | collected zombie processes
[2025-11-22 22:03:48] 2025-11-23 03:03:09,566 | INFO     | will attempt to kill all subprocesses of pid=19401
[2025-11-22 22:03:48] 2025-11-23 03:03:09,650 | INFO     | process IDs to be killed: [19401] (in reverse order)
[2025-11-22 22:03:48] 2025-11-23 03:03:09,706 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 22:03:48] 2025-11-23 03:03:09,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 22:03:48] 2025-11-23 03:03:09,711 | INFO     | did not find any defunct processes belonging to 19401
[2025-11-22 22:03:48] 2025-11-23 03:03:09,714 | INFO     | did not find any defunct processes belonging to 19401
[2025-11-22 22:03:48] 2025-11-23 03:03:09,716 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 22:03:48] 2025-11-23 03:03:09,717 | INFO     | ready for new job
[2025-11-22 22:03:48] 2025-11-23 03:03:09,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 22:03:48] 2025-11-23 03:03:09,720 | INFO     | ***************************************
[2025-11-22 22:03:48] 2025-11-23 03:03:09,720 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 22:03:48] 2025-11-23 03:03:09,720 | INFO     | ***************************************
[2025-11-22 22:03:48] 2025-11-23 03:03:09,720 | INFO     | 
[2025-11-22 22:03:48] 2025-11-23 03:03:09,721 | INFO     | architecture information:
[2025-11-22 22:03:48] 2025-11-23 03:03:09,721 | INFO     | executing command: cat /etc/os-release
[2025-11-22 22:03:48] 2025-11-23 03:03:09,739 | INFO     | cat /etc/os-release:
[2025-11-22 22:03:48] NAME="CentOS Linux"
[2025-11-22 22:03:48] VERSION="7 (Core)"
[2025-11-22 22:03:48] ID="centos"
[2025-11-22 22:03:48] ID_LIKE="rhel fedora"
[2025-11-22 22:03:48] VERSION_ID="7"
[2025-11-22 22:03:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 22:03:48] ANSI_COLOR="0;31"
[2025-11-22 22:03:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 22:03:48] HOME_URL="https://www.centos.org/"
[2025-11-22 22:03:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 22:03:48] 
[2025-11-22 22:03:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 22:03:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 22:03:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 22:03:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 22:03:48] 
[2025-11-22 22:03:48] 2025-11-23 03:03:09,740 | INFO     | ***************************************
[2025-11-22 22:03:48] 2025-11-23 03:03:10,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 22:03:48] 2025-11-23 03:03:10,262 | INFO     | sufficient remaining disk space (17470324736 B)
[2025-11-22 22:03:48] 2025-11-23 03:03:10,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 22:03:48] 2025-11-23 03:03:10,263 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 22:03:48] 2025-11-23 03:03:10,263 | INFO     | update_server=False
[2025-11-22 22:03:48] 2025-11-23 03:03:10,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 22:03:48] 2025-11-23 03:03:10,264 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:03:48] 2025-11-23 03:03:10,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:03:48] 2025-11-23 03:03:10,264 | INFO     | aborting loop
[2025-11-22 22:03:48] 2025-11-23 03:03:10,442 | INFO     | all payload control threads have been joined
[2025-11-22 22:03:48] 2025-11-23 03:03:10,740 | INFO     | all job control threads have been joined
[2025-11-22 22:03:48] 2025-11-23 03:03:10,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 22:03:48] 2025-11-23 03:03:11,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 22:03:48] 2025-11-23 03:03:11,148 | INFO     | all data control threads have been joined
[2025-11-22 22:03:48] 2025-11-23 03:03:11,268 | INFO     | [job] queue monitor thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:11,269 | INFO     | [job] retrieve thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:11,270 | INFO     | [job] job monitor thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:11,323 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:11,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:11,436 | INFO     | [job] validate thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:11,451 | INFO     | [payload] control thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:11,745 | INFO     | [job] control thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:11,979 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:11,996 | INFO     | [payload] validate_post thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:12,154 | INFO     | [data] control thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:12,268 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:12,735 | INFO     | [payload] failed_post thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:12,755 | INFO     | [data] copytool_in thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:13,110 | INFO     | [data] copytool_out thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:14,845 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 22:03:48] 2025-11-23 03:03:40,117 | INFO     | PID=12929 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 22:03:48] 2025-11-23 03:03:40,118 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 22:03:48] 2025-11-23 03:03:40,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 22:03:48] 2025-11-23 03:03:40,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 22:03:48] 2025-11-23 03:03:42,564 | INFO     | [monitor] cgroup control has ended
[2025-11-22 22:03:48] 2025-11-23 03:03:43,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139834343937856)>', '<ExcThread(monitor, started 139833305450240)>']
[2025-11-22 22:03:48] 2025-11-23 03:03:44,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 22:03:48] 2025-11-23 03:03:44,139 | INFO     | [monitor] control thread has ended
[2025-11-22 22:03:48] 2025-11-23 03:03:48,595 | INFO     | all workflow threads have been joined
[2025-11-22 22:03:48] 2025-11-23 03:03:48,595 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 22:03:48] 2025-11-23 03:03:48,596 | INFO     | traces error code: 0
[2025-11-22 22:03:48] 2025-11-23 03:03:48,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 22:03:48] 2025-11-23 03:03:48,694 [wrapper] ==== pilot stdout END ====
[2025-11-22 22:03:48] 2025-11-23 03:03:48,699 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 22:03:48] 2025-11-23 03:03:48,703 [wrapper] pilotpid: 12929
[2025-11-22 22:03:48] 2025-11-23 03:03:48,708 [wrapper] Pilot exit status: 0
[2025-11-22 22:03:48] 2025-11-23 03:03:48,724 [wrapper] pandaids: 6895328303
[2025-11-22 22:03:48] 2025-11-23 03:03:48,776 [wrapper] cleanup supervisor_pilot 13433 12930
[2025-11-22 22:03:48] 2025-11-23 03:03:48,781 [wrapper] Test setup, not cleaning
[2025-11-22 22:03:48] 2025-11-23 03:03:48,787 [wrapper] apfmon messages muted
[2025-11-22 22:03:48] 2025-11-23 03:03:48,792 [wrapper] ==== wrapper stdout END ====
[2025-11-22 22:03:48] 2025-11-23 03:03:48,797 [wrapper] ==== wrapper stderr END ====
[2025-11-22 22:03:48]  *** Error codes and diagnostics ***
[2025-11-22 22:03:48]     "exeErrorCode": 0,
[2025-11-22 22:03:48]     "exeErrorDiag": "",
[2025-11-22 22:03:48]     "pilotErrorCode": 0,
[2025-11-22 22:03:48]     "pilotErrorDiag": "",
[2025-11-22 22:03:48]  *** Listing of results directory ***
[2025-11-22 22:03:48] total 1314548
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 11:36 pilot3.tar.gz
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 11:42 queuedata.json
[2025-11-22 22:03:48] -rwx------ 1 boincer umatlas     36292 Nov 21 11:45 runpilot2-wrapper.sh
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas       100 Nov 22 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 22:03:48] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 10:57 run_atlas
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas       105 Nov 22 10:57 job.xml
[2025-11-22 22:03:48] -rw-r--r-- 2 boincer umatlas 412368467 Nov 22 10:57 EVNT.47483658._001028.pool.root.1
[2025-11-22 22:03:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 10:57 start_atlas.sh
[2025-11-22 22:03:48] drwxrwx--x 2 boincer umatlas      4096 Nov 22 10:57 shared
[2025-11-22 22:03:48] -rw-r--r-- 2 boincer umatlas    590103 Nov 22 10:57 input.tar.gz
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas         0 Nov 22 10:57 boinc_lockfile
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas      2784 Nov 22 10:57 pandaJob.out
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas        57 Nov 22 10:57 setup.sh.local
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas    989768 Nov 22 10:57 agis_schedconf.cvmfs.json
[2025-11-22 22:03:48] drwx------ 5 boincer umatlas      4096 Nov 22 10:57 pilot3
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas       532 Nov 22 21:50 boinc_task_state.xml
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas      5910 Nov 22 22:01 init_data.xml
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas 914957148 Nov 22 22:02 HITS.47556149._000149.pool.root.1
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas      1061 Nov 22 22:02 memory_monitor_summary.json
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas        95 Nov 22 22:02 pilot_heartbeat.json
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas   1526164 Nov 22 22:02 agis_ddmendpoints.agis.ALL.json
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas   1908788 Nov 22 22:02 log.47556149._000149.job.log.tgz.1
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas      8656 Nov 22 22:03 heartbeat.json
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 22:03 boinc_mmap_file
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas        29 Nov 22 22:03 wrapper_checkpoint.txt
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas      4746 Nov 22 22:03 pilotlog.txt
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas   5510867 Nov 22 22:03 log.47556149._000149.job.log.1
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas       353 Nov 22 22:03 output.list
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas       620 Nov 22 22:03 runtime_log
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas   7444480 Nov 22 22:03 result.tar.gz
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas       667 Nov 22 22:03 SEqNDmLRjg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7YJKDmudGuTo.diag
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas      9338 Nov 22 22:03 runtime_log.err
[2025-11-22 22:03:48] -rw-r--r-- 1 boincer umatlas     21309 Nov 22 22:03 stderr.txt
[2025-11-22 22:03:48] HITS file was successfully produced:
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas 914957148 Nov 22 22:02 shared/HITS.pool.root.1
[2025-11-22 22:03:48]  *** Contents of shared directory: ***
[2025-11-22 22:03:48] total 1304092
[2025-11-22 22:03:48] -rw-r--r-- 2 boincer umatlas 412368467 Nov 22 10:57 ATLAS.root_0
[2025-11-22 22:03:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 10:57 start_atlas.sh
[2025-11-22 22:03:48] -rw-r--r-- 2 boincer umatlas    590103 Nov 22 10:57 input.tar.gz
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas 914957148 Nov 22 22:02 HITS.pool.root.1
[2025-11-22 22:03:48] -rw------- 1 boincer umatlas   7444480 Nov 22 22:03 result.tar.gz
22:03:50 (9249): run_atlas exited; CPU time 307388.933866
22:03:50 (9249): called boinc_finish(0)

</stderr_txt>
]]>

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