Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:33:13 (2626224): wrapper (7.7.26015): starting
04:33:13 (2626224): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 04:33:13] Arguments: --nthreads 4
[2025-11-25 04:33:13] Threads: 4
[2025-11-25 04:33:13] Checking for CVMFS
[2025-11-25 04:33:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:33:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:33:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:33:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:33:13] 2.9.2.0 1682378 6461 94956 153268 3 81 26999465 36864001 0 130560 0 2726639 99.982 212824 5797 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 04:33:13] CVMFS is ok
[2025-11-25 04:33:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:33:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:33:13] Further information can be found at the LHC@home message board.
[2025-11-25 04:33:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:33:13] Checking for apptainer binary...
[2025-11-25 04:33:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:33:13] Running /usr/bin/apptainer --version
[2025-11-25 04:33:13] apptainer version 1.4.1-1.1
[2025-11-25 04:33:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:33:14] thA315b
[2025-11-25 04:33:14] apptainer works
[2025-11-25 04:33:14] Set ATHENA_PROC_NUMBER=4
[2025-11-25 04:33:14] Set ATHENA_CORE_NUMBER=4
[2025-11-25 04:33:14] Starting ATLAS job with PandaID=6895328187
[2025-11-25 04:33:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 10:34:54]  *** The last 200 lines of the pilot log: ***
[2025-11-25 10:34:54] 2025-11-25 09:34:08,400 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 10:34:54] 2025-11-25 09:34:08,401 | INFO     | did not find any defunct processes belonging to 2636589
[2025-11-25 10:34:54] 2025-11-25 09:34:08,402 | INFO     | did not find any defunct processes belonging to 2636589
[2025-11-25 10:34:54] 2025-11-25 09:34:08,403 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 10:34:54] 2025-11-25 09:34:08,403 | INFO     | ready for new job
[2025-11-25 10:34:54] 2025-11-25 09:34:08,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 10:34:54] 2025-11-25 09:34:08,404 | INFO     | ***************************************
[2025-11-25 10:34:54] 2025-11-25 09:34:08,404 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 10:34:54] 2025-11-25 09:34:08,404 | INFO     | ***************************************
[2025-11-25 10:34:54] 2025-11-25 09:34:08,404 | INFO     | 
[2025-11-25 10:34:54] 2025-11-25 09:34:08,404 | INFO     | architecture information:
[2025-11-25 10:34:54] 2025-11-25 09:34:08,405 | INFO     | executing command: cat /etc/os-release
[2025-11-25 10:34:54] 2025-11-25 09:34:08,414 | INFO     | cat /etc/os-release:
[2025-11-25 10:34:54] NAME="CentOS Linux"
[2025-11-25 10:34:54] VERSION="7 (Core)"
[2025-11-25 10:34:54] ID="centos"
[2025-11-25 10:34:54] ID_LIKE="rhel fedora"
[2025-11-25 10:34:54] VERSION_ID="7"
[2025-11-25 10:34:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 10:34:54] ANSI_COLOR="0;31"
[2025-11-25 10:34:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 10:34:54] HOME_URL="https://www.centos.org/"
[2025-11-25 10:34:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 10:34:54] 
[2025-11-25 10:34:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 10:34:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 10:34:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 10:34:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 10:34:54] 
[2025-11-25 10:34:54] 2025-11-25 09:34:08,414 | INFO     | ***************************************
[2025-11-25 10:34:54] 2025-11-25 09:34:08,917 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 10:34:54] 2025-11-25 09:34:08,931 | INFO     | sufficient remaining disk space (328993865728 B)
[2025-11-25 10:34:54] 2025-11-25 09:34:08,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 10:34:54] 2025-11-25 09:34:08,931 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 10:34:54] 2025-11-25 09:34:08,931 | INFO     | update_server=False
[2025-11-25 10:34:54] 2025-11-25 09:34:08,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 10:34:54] 2025-11-25 09:34:08,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:34:54] 2025-11-25 09:34:08,932 | INFO     | aborting loop
[2025-11-25 10:34:54] 2025-11-25 09:34:08,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:34:54] 2025-11-25 09:34:08,932 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 10:34:54] 2025-11-25 09:34:08,932 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 10:34:54] 2025-11-25 09:34:08,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 10:34:54] 2025-11-25 09:34:08,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 10:34:54] 2025-11-25 09:34:09,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 10:34:54] 2025-11-25 09:34:09,292 | INFO     | all data control threads have been joined
[2025-11-25 10:34:54] 2025-11-25 09:34:09,434 | INFO     | all job control threads have been joined
[2025-11-25 10:34:54] 2025-11-25 09:34:09,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 10:34:54] 2025-11-25 09:34:09,937 | INFO     | [job] job monitor thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:09,938 | INFO     | [job] queue monitor thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:09,938 | INFO     | [job] retrieve thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:09,986 | INFO     | all payload control threads have been joined
[2025-11-25 10:34:54] 2025-11-25 09:34:10,237 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:10,297 | INFO     | [data] control thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:10,440 | INFO     | [job] control thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:10,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:10,771 | INFO     | [payload] validate_post thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:10,992 | INFO     | [payload] control thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:11,083 | INFO     | [data] copytool_out thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:11,163 | INFO     | [data] copytool_in thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:11,166 | INFO     | [job] validate thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:11,329 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:11,329 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:11,430 | INFO     | [payload] failed_post thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:13,768 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 10:34:54] 2025-11-25 09:34:47,518 | INFO     | [monitor] cgroup control has ended
[2025-11-25 10:34:54] 2025-11-25 09:34:49,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140078982285120)>', '<ExcThread(monitor, started 140078244411136)>']
[2025-11-25 10:34:54] 2025-11-25 09:34:50,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 10:34:54] 2025-11-25 09:34:50,152 | INFO     | [monitor] control thread has ended
[2025-11-25 10:34:54] 2025-11-25 09:34:54,237 | INFO     | all workflow threads have been joined
[2025-11-25 10:34:54] 2025-11-25 09:34:54,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 10:34:54] 2025-11-25 09:34:54,237 | INFO     | traces error code: 0
[2025-11-25 10:34:54] 2025-11-25 09:34:54,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 10:34:54] 2025-11-25 09:34:54,292 [wrapper] ==== pilot stdout END ====
[2025-11-25 10:34:54] 2025-11-25 09:34:54,295 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 10:34:54] 2025-11-25 09:34:54,298 [wrapper] pilotpid: 2630025
[2025-11-25 10:34:54] 2025-11-25 09:34:54,300 [wrapper] Pilot exit status: 0
[2025-11-25 10:34:54] 2025-11-25 09:34:54,308 [wrapper] pandaids: 6895328187
[2025-11-25 10:34:54] 2025-11-25 09:34:54,326 [wrapper] cleanup supervisor_pilot 2675115 2630026
[2025-11-25 10:34:54] 2025-11-25 09:34:54,329 [wrapper] Test setup, not cleaning
[2025-11-25 10:34:54] 2025-11-25 09:34:54,332 [wrapper] apfmon messages muted
[2025-11-25 10:34:54] 2025-11-25 09:34:54,334 [wrapper] ==== wrapper stdout END ====
[2025-11-25 10:34:54] 2025-11-25 09:34:54,337 [wrapper] ==== wrapper stderr END ====
[2025-11-25 10:34:54]  *** Error codes and diagnostics ***
[2025-11-25 10:34:54]     "exeErrorCode": 0,
[2025-11-25 10:34:54]     "exeErrorDiag": "",
[2025-11-25 10:34:54]     "pilotErrorCode": 0,
[2025-11-25 10:34:54]     "pilotErrorDiag": "",
[2025-11-25 10:34:54]  *** Listing of results directory ***
[2025-11-25 10:34:54] total 1300956
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc    576529 Nov 21 17:36 pilot3.tar.gz
[2025-11-25 10:34:54] -rwx------ 1 boinc boinc     36292 Nov 21 17:39 runpilot2-wrapper.sh
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc      5112 Nov 21 17:39 queuedata.json
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc       100 Nov 25 04:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 10:34:54] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 04:33 run_atlas
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc       105 Nov 25 04:33 job.xml
[2025-11-25 10:34:54] -rw-r--r-- 2 boinc boinc 410094547 Nov 25 04:33 EVNT.47483658._000069.pool.root.1
[2025-11-25 10:34:54] -rw-r--r-- 2 boinc boinc    590095 Nov 25 04:33 input.tar.gz
[2025-11-25 10:34:54] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:33 start_atlas.sh
[2025-11-25 10:34:54] drwxrwx--x 2 boinc boinc      4096 Nov 25 04:33 shared
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:33 boinc_setup_complete
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc      6444 Nov 25 04:33 init_data.xml
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:33 boinc_lockfile
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc      2783 Nov 25 04:33 pandaJob.out
[2025-11-25 10:34:54] -rw------- 1 boinc boinc    991801 Nov 25 04:33 agis_schedconf.cvmfs.json
[2025-11-25 10:34:54] drwx------ 5 boinc boinc      4096 Nov 25 04:33 pilot3
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc       531 Nov 25 10:30 boinc_task_state.xml
[2025-11-25 10:34:54] -rw------- 1 boinc boinc        95 Nov 25 10:33 pilot_heartbeat.json
[2025-11-25 10:34:54] -rw------- 1 boinc boinc 909647952 Nov 25 10:33 HITS.47556137._000686.pool.root.1
[2025-11-25 10:34:54] -rw------- 1 boinc boinc      1024 Nov 25 10:33 memory_monitor_summary.json
[2025-11-25 10:34:54] -rw------- 1 boinc boinc   1516240 Nov 25 10:34 agis_ddmendpoints.agis.ALL.json
[2025-11-25 10:34:54] -rw------- 1 boinc boinc   1209324 Nov 25 10:34 log.47556137._000686.job.log.tgz.1
[2025-11-25 10:34:54] -rw------- 1 boinc boinc      8561 Nov 25 10:34 heartbeat.json
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc      8192 Nov 25 10:34 boinc_mmap_file
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc        28 Nov 25 10:34 wrapper_checkpoint.txt
[2025-11-25 10:34:54] -rw------- 1 boinc boinc      4556 Nov 25 10:34 pilotlog.txt
[2025-11-25 10:34:54] -rw------- 1 boinc boinc   3056057 Nov 25 10:34 log.47556137._000686.job.log.1
[2025-11-25 10:34:54] -rw------- 1 boinc boinc       353 Nov 25 10:34 output.list
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc       620 Nov 25 10:34 runtime_log
[2025-11-25 10:34:54] -rw------- 1 boinc boinc   4280320 Nov 25 10:34 result.tar.gz
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc      8903 Nov 25 10:34 runtime_log.err
[2025-11-25 10:34:54] -rw------- 1 boinc boinc       666 Nov 25 10:34 3FoKDmZLjg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpjHKDmct2DWm.diag
[2025-11-25 10:34:54] -rw-r--r-- 1 boinc boinc     10008 Nov 25 10:34 stderr.txt
[2025-11-25 10:34:54] HITS file was successfully produced:
[2025-11-25 10:34:54] -rw------- 1 boinc boinc 909647952 Nov 25 10:33 shared/HITS.pool.root.1
[2025-11-25 10:34:54]  *** Contents of shared directory: ***
[2025-11-25 10:34:54] total 1293600
[2025-11-25 10:34:54] -rw-r--r-- 2 boinc boinc 410094547 Nov 25 04:33 ATLAS.root_0
[2025-11-25 10:34:54] -rw-r--r-- 2 boinc boinc    590095 Nov 25 04:33 input.tar.gz
[2025-11-25 10:34:54] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:33 start_atlas.sh
[2025-11-25 10:34:54] -rw------- 1 boinc boinc 909647952 Nov 25 10:33 HITS.pool.root.1
[2025-11-25 10:34:54] -rw------- 1 boinc boinc   4280320 Nov 25 10:34 result.tar.gz
10:34:55 (2626224): run_atlas exited; CPU time 84556.320510
10:34:55 (2626224): called boinc_finish(0)

</stderr_txt>
]]>

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