Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:48:49 (12818): wrapper (7.7.26015): starting
09:48:49 (12818): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 09:48:49] Arguments: --nthreads 12
[2025-11-22 09:48:49] Threads: 12
[2025-11-22 09:48:49] Checking for CVMFS
[2025-11-22 09:48:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 09:48:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 09:48:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 09:48:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 09:48:50] 2.11.2.0 6893 111976 93752 153174 1 81 14750447 20275201 1 130560 0 47922448 99.931 5820859 30828 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 09:48:50] CVMFS is ok
[2025-11-22 09:48:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 09:48:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 09:48:50] Further information can be found at the LHC@home message board.
[2025-11-22 09:48:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 09:48:50] Checking for apptainer binary...
[2025-11-22 09:48:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 09:48:50] Running /usr/bin/apptainer --version
[2025-11-22 09:48:50] apptainer version 1.3.2-1.el7
[2025-11-22 09:48:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 09:48:51] c-205-3.aglt2.org
[2025-11-22 09:48:51] apptainer works
[2025-11-22 09:48:51] Set ATHENA_PROC_NUMBER=12
[2025-11-22 09:48:51] Set ATHENA_CORE_NUMBER=12
[2025-11-22 09:48:51] Starting ATLAS job with PandaID=6895328184
[2025-11-22 09:48:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 17:06:54]  *** The last 200 lines of the pilot log: ***
[2025-11-22 17:06:54] 2025-11-22 22:05:52,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 17:06:54] 2025-11-22 22:05:54,306 | INFO     | time since job start (26207s) is within the limit (172800.0s)
[2025-11-22 17:06:54] 2025-11-22 22:05:54,828 | INFO     | monitor loop #1964: job 0:6895328184 is in state 'finished'
[2025-11-22 17:06:54] 2025-11-22 22:05:54,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 17:06:54] 2025-11-22 22:05:55,872 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 17:06:54] 2025-11-22 22:05:55,875 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1851.0833333333333
[2025-11-22 17:06:54] 2025-11-22 22:05:55,878 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895328184/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 17:06:54] 2025-11-22 22:05:55,879 | INFO     | extracted standard info from prmon json
[2025-11-22 17:06:54] 2025-11-22 22:05:55,879 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 17:06:54] 2025-11-22 22:05:55,879 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 17:06:54] 2025-11-22 22:05:55,890 | INFO     | fitting pss+swap vs Time
[2025-11-22 17:06:54] 2025-11-22 22:05:55,891 | INFO     | sum of square deviations: 24482162670.536087
[2025-11-22 17:06:54] 2025-11-22 22:05:55,895 | INFO     | sum of deviations: 410163679991.6599
[2025-11-22 17:06:54] 2025-11-22 22:05:55,895 | INFO     | mean x: 1763836030.1771562
[2025-11-22 17:06:54] 2025-11-22 22:05:55,895 | INFO     | mean y: 3431347.557109557
[2025-11-22 17:06:54] 2025-11-22 22:05:55,895 | INFO     | intersect: -29547122938.646446
[2025-11-22 17:06:54] 2025-11-22 22:05:55,896 | INFO     | chi2: 5.662838606100191
[2025-11-22 17:06:54] 2025-11-22 22:05:55,896 | INFO     | sum of square deviations: 23636104870.377357
[2025-11-22 17:06:54] 2025-11-22 22:05:55,900 | INFO     | sum of deviations: 556758853537.6044
[2025-11-22 17:06:54] 2025-11-22 22:05:55,900 | INFO     | mean x: 1763835877.6792452
[2025-11-22 17:06:54] 2025-11-22 22:05:55,900 | INFO     | mean y: 3457742.636792453
[2025-11-22 17:06:54] 2025-11-22 22:05:55,900 | INFO     | intersect: -41544472699.82584
[2025-11-22 17:06:54] 2025-11-22 22:05:55,901 | INFO     | chi2: 3.221780588803219
[2025-11-22 17:06:54] 2025-11-22 22:05:55,901 | INFO     | current chi2=3.221780588803219 (change=43.106614669670904 %)
[2025-11-22 17:06:54] 2025-11-22 22:05:55,902 | INFO     | sum of square deviations: 22809768370.214725
[2025-11-22 17:06:54] 2025-11-22 22:05:55,905 | INFO     | sum of deviations: 610434100224.1072
[2025-11-22 17:06:54] 2025-11-22 22:05:55,905 | INFO     | mean x: 1763835725.1813843
[2025-11-22 17:06:54] 2025-11-22 22:05:55,906 | INFO     | mean y: 3467599.0906921243
[2025-11-22 17:06:54] 2025-11-22 22:05:55,906 | INFO     | intersect: -47200232866.81185
[2025-11-22 17:06:54] 2025-11-22 22:05:55,906 | INFO     | chi2: 2.6278730921685285
[2025-11-22 17:06:54] 2025-11-22 22:05:55,906 | INFO     | current chi2=2.6278730921685285 (change=18.4341385226145 %)
[2025-11-22 17:06:54] 2025-11-22 22:05:55,907 | INFO     | right removable region: 418
[2025-11-22 17:06:54] 2025-11-22 22:05:55,907 | INFO     | sum of square deviations: 23636058510.377342
[2025-11-22 17:06:54] 2025-11-22 22:05:55,911 | INFO     | sum of deviations: 262628268109.45276
[2025-11-22 17:06:54] 2025-11-22 22:05:55,911 | INFO     | mean x: 1763836182.6792452
[2025-11-22 17:06:54] 2025-11-22 22:05:55,911 | INFO     | mean y: 3457866.5400943398
[2025-11-22 17:06:54] 2025-11-22 22:05:55,911 | INFO     | intersect: -19595124599.417896
[2025-11-22 17:06:54] 2025-11-22 22:05:55,912 | INFO     | chi2: 3.20604083980752
[2025-11-22 17:06:54] 2025-11-22 22:05:55,912 | INFO     | current chi2=3.20604083980752 (change=43.38456271111329 %)
[2025-11-22 17:06:54] 2025-11-22 22:05:55,913 | INFO     | sum of square deviations: 22809675650.214725
[2025-11-22 17:06:54] 2025-11-22 22:05:55,916 | INFO     | sum of deviations: 229677986952.2003
[2025-11-22 17:06:54] 2025-11-22 22:05:55,917 | INFO     | mean x: 1763836335.1813843
[2025-11-22 17:06:54] 2025-11-22 22:05:55,917 | INFO     | mean y: 3463940.1026252983
[2025-11-22 17:06:54] 2025-11-22 22:05:55,917 | INFO     | intersect: -17757173474.914413
[2025-11-22 17:06:54] 2025-11-22 22:05:55,917 | INFO     | chi2: 3.153627197275846
[2025-11-22 17:06:54] 2025-11-22 22:05:55,917 | INFO     | current chi2=3.153627197275846 (change=1.634840139304678 %)
[2025-11-22 17:06:54] 2025-11-22 22:05:55,917 | INFO     | left removable region: 20
[2025-11-22 17:06:54] 2025-11-22 22:05:55,918 | INFO     | sum of square deviations: 19549077754.987434
[2025-11-22 17:06:54] 2025-11-22 22:05:55,921 | INFO     | sum of deviations: 382609118562.1257
[2025-11-22 17:06:54] 2025-11-22 22:05:55,921 | INFO     | mean x: 1763836304.6909547
[2025-11-22 17:06:54] 2025-11-22 22:05:55,922 | INFO     | mean y: 3510433.0904522613
[2025-11-22 17:06:54] 2025-11-22 22:05:55,922 | INFO     | intersect: -34517803681.25493
[2025-11-22 17:06:54] 2025-11-22 22:05:55,922 | INFO     | chi2: 0.07300568501393766
[2025-11-22 17:06:54] 2025-11-22 22:05:55,922 | INFO     | current memory leak: 19.57 B/s (using 398 data points, chi2=0.07)
[2025-11-22 17:06:54] 2025-11-22 22:05:55,923 | INFO     | could have reported an average CPU frequency of 2396 MHz (18 samples)
[2025-11-22 17:06:54] 2025-11-22 22:05:55,923 | INFO     | ..............................
[2025-11-22 17:06:54] 2025-11-22 22:05:55,923 | INFO     | . Timing measurements:
[2025-11-22 17:06:54] 2025-11-22 22:05:55,923 | INFO     | . get job = 0 s
[2025-11-22 17:06:54] 2025-11-22 22:05:55,923 | INFO     | . initial setup = 2 s
[2025-11-22 17:06:54] 2025-11-22 22:05:55,923 | INFO     | . payload setup = 7 s
[2025-11-22 17:06:54] 2025-11-22 22:05:55,924 | INFO     | . stage-in = 0 s
[2025-11-22 17:06:54] 2025-11-22 22:05:55,924 | INFO     | . payload execution = 26171 s
[2025-11-22 17:06:54] 2025-11-22 22:05:55,924 | INFO     | . stage-out = 3 s
[2025-11-22 17:06:54] 2025-11-22 22:05:55,924 | INFO     | . log creation = 0 s
[2025-11-22 17:06:54] 2025-11-22 22:05:55,924 | INFO     | ..............................
[2025-11-22 17:06:54] 2025-11-22 22:05:56,007 | INFO     | 
[2025-11-22 17:06:54] 2025-11-22 22:05:56,007 | INFO     | job summary report
[2025-11-22 17:06:54] 2025-11-22 22:05:56,007 | INFO     | --------------------------------------------------
[2025-11-22 17:06:54] 2025-11-22 22:05:56,007 | INFO     | PanDA job id: 6895328184
[2025-11-22 17:06:54] 2025-11-22 22:05:56,007 | INFO     | task id: 47556137
[2025-11-22 17:06:54] 2025-11-22 22:05:56,008 | INFO     | errors: (none)
[2025-11-22 17:06:54] 2025-11-22 22:05:56,008 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 17:06:54] 2025-11-22 22:05:56,008 | INFO     | pilot state: finished 
[2025-11-22 17:06:54] 2025-11-22 22:05:56,008 | INFO     | transexitcode: 0
[2025-11-22 17:06:54] 2025-11-22 22:05:56,008 | INFO     | exeerrorcode: 0
[2025-11-22 17:06:54] 2025-11-22 22:05:56,008 | INFO     | exeerrordiag: 
[2025-11-22 17:06:54] 2025-11-22 22:05:56,009 | INFO     | exitcode: 0
[2025-11-22 17:06:54] 2025-11-22 22:05:56,009 | INFO     | exitmsg: OK
[2025-11-22 17:06:54] 2025-11-22 22:05:56,009 | INFO     | cpuconsumptiontime: 299840 s
[2025-11-22 17:06:54] 2025-11-22 22:05:56,009 | INFO     | nevents: 1000
[2025-11-22 17:06:54] 2025-11-22 22:05:56,009 | INFO     | neventsw: 0
[2025-11-22 17:06:54] 2025-11-22 22:05:56,009 | INFO     | pid: 24688
[2025-11-22 17:06:54] 2025-11-22 22:05:56,009 | INFO     | pgrp: 24688
[2025-11-22 17:06:54] 2025-11-22 22:05:56,010 | INFO     | corecount: 12
[2025-11-22 17:06:54] 2025-11-22 22:05:56,010 | INFO     | event service: False
[2025-11-22 17:06:54] 2025-11-22 22:05:56,010 | INFO     | sizes: {0: 2298631, 1: 2298830, 6: 2299092, 12: 2299120, 26183: 2336494, 26188: 2345700, 26193: 2345890}
[2025-11-22 17:06:54] 2025-11-22 22:05:56,010 | INFO     | --------------------------------------------------
[2025-11-22 17:06:54] 2025-11-22 22:05:56,010 | INFO     | 
[2025-11-22 17:06:54] 2025-11-22 22:05:56,011 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 17:06:54] 2025-11-22 22:05:56,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 17:06:54] 2025-11-22 22:05:56,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 17:06:54] 2025-11-22 22:05:56,038 | INFO     | job 6895328184 has completed (purged errors)
[2025-11-22 17:06:54] 2025-11-22 22:05:56,039 | INFO     | overall cleanup function is called
[2025-11-22 17:06:54] 2025-11-22 22:05:57,055 | INFO     | --- collectZombieJob: --- 10, [24688]
[2025-11-22 17:06:54] 2025-11-22 22:05:57,056 | INFO     | zombie collector waiting for pid 24688
[2025-11-22 17:06:54] 2025-11-22 22:05:57,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 17:06:54] 2025-11-22 22:05:57,056 | INFO     | collected zombie processes
[2025-11-22 17:06:54] 2025-11-22 22:05:57,056 | INFO     | will attempt to kill all subprocesses of pid=24688
[2025-11-22 17:06:54] 2025-11-22 22:05:57,149 | INFO     | process IDs to be killed: [24688] (in reverse order)
[2025-11-22 17:06:54] 2025-11-22 22:05:57,203 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 17:06:54] 2025-11-22 22:05:57,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 17:06:54] 2025-11-22 22:05:57,206 | INFO     | did not find any defunct processes belonging to 24688
[2025-11-22 17:06:54] 2025-11-22 22:05:57,208 | INFO     | did not find any defunct processes belonging to 24688
[2025-11-22 17:06:54] 2025-11-22 22:05:57,210 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 17:06:54] 2025-11-22 22:05:57,210 | INFO     | ready for new job
[2025-11-22 17:06:54] 2025-11-22 22:05:57,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 17:06:54] 2025-11-22 22:05:57,213 | INFO     | ***************************************
[2025-11-22 17:06:54] 2025-11-22 22:05:57,213 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 17:06:54] 2025-11-22 22:05:57,213 | INFO     | ***************************************
[2025-11-22 17:06:54] 2025-11-22 22:05:57,213 | INFO     | 
[2025-11-22 17:06:54] 2025-11-22 22:05:57,214 | INFO     | architecture information:
[2025-11-22 17:06:54] 2025-11-22 22:05:57,215 | INFO     | executing command: cat /etc/os-release
[2025-11-22 17:06:54] 2025-11-22 22:05:57,229 | INFO     | cat /etc/os-release:
[2025-11-22 17:06:54] NAME="CentOS Linux"
[2025-11-22 17:06:54] VERSION="7 (Core)"
[2025-11-22 17:06:54] ID="centos"
[2025-11-22 17:06:54] ID_LIKE="rhel fedora"
[2025-11-22 17:06:54] VERSION_ID="7"
[2025-11-22 17:06:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 17:06:54] ANSI_COLOR="0;31"
[2025-11-22 17:06:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 17:06:54] HOME_URL="https://www.centos.org/"
[2025-11-22 17:06:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 17:06:54] 
[2025-11-22 17:06:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 17:06:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 17:06:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 17:06:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 17:06:54] 
[2025-11-22 17:06:54] 2025-11-22 22:05:57,230 | INFO     | ***************************************
[2025-11-22 17:06:54] 2025-11-22 22:05:57,733 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 17:06:54] 2025-11-22 22:05:57,749 | INFO     | sufficient remaining disk space (28367126528 B)
[2025-11-22 17:06:54] 2025-11-22 22:05:57,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 17:06:54] 2025-11-22 22:05:57,750 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 17:06:54] 2025-11-22 22:05:57,750 | INFO     | update_server=False
[2025-11-22 17:06:54] 2025-11-22 22:05:57,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 17:06:54] 2025-11-22 22:05:57,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 17:06:54] 2025-11-22 22:05:57,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 17:06:54] 2025-11-22 22:05:58,007 | INFO     | all job control threads have been joined
[2025-11-22 17:06:54] 2025-11-22 22:05:58,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 17:06:54] 2025-11-22 22:05:58,337 | INFO     | aborting loop
[2025-11-22 17:06:54] 2025-11-22 22:05:58,619 | INFO     | all payload control threads have been joined
[2025-11-22 17:06:54] 2025-11-22 22:05:58,756 | INFO     | [job] retrieve thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:05:58,756 | INFO     | [job] queue monitor thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:05:58,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:05:58,818 | INFO     | all data control threads have been joined
[2025-11-22 17:06:54] 2025-11-22 22:05:58,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 17:06:54] 2025-11-22 22:05:58,911 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:05:58,950 | INFO     | [data] copytool_in thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:05:58,991 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:05:59,013 | INFO     | [job] control thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:05:59,104 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:05:59,342 | INFO     | [job] job monitor thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:05:59,624 | INFO     | [payload] control thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:05:59,822 | INFO     | [data] control thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:05:59,884 | INFO     | [payload] failed_post thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:06:00,005 | INFO     | [payload] validate_post thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:06:00,148 | INFO     | [job] validate thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:06:00,879 | INFO     | [data] copytool_out thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:06:01,756 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 17:06:54] 2025-11-22 22:06:27,507 | INFO     | PID=17549 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 17:06:54] 2025-11-22 22:06:27,507 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 17:06:54] 2025-11-22 22:06:27,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 17:06:54] 2025-11-22 22:06:27,508 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 17:06:54] 2025-11-22 22:06:49,053 | INFO     | [monitor] cgroup control has ended
[2025-11-22 17:06:54] 2025-11-22 22:06:49,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702393325376)>', '<ExcThread(monitor, started 140701434107648)>']
[2025-11-22 17:06:54] 2025-11-22 22:06:49,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 17:06:54] 2025-11-22 22:06:49,605 | INFO     | [monitor] control thread has ended
[2025-11-22 17:06:54] 2025-11-22 22:06:54,308 | INFO     | all workflow threads have been joined
[2025-11-22 17:06:54] 2025-11-22 22:06:54,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 17:06:54] 2025-11-22 22:06:54,316 | INFO     | traces error code: 0
[2025-11-22 17:06:54] 2025-11-22 22:06:54,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 17:06:54] 2025-11-22 22:06:54,406 [wrapper] ==== pilot stdout END ====
[2025-11-22 17:06:54] 2025-11-22 22:06:54,410 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 17:06:54] 2025-11-22 22:06:54,414 [wrapper] pilotpid: 17549
[2025-11-22 17:06:54] 2025-11-22 22:06:54,418 [wrapper] Pilot exit status: 0
[2025-11-22 17:06:54] 2025-11-22 22:06:54,434 [wrapper] pandaids: 6895328184
[2025-11-22 17:06:54] 2025-11-22 22:06:54,483 [wrapper] cleanup supervisor_pilot 20949 17550
[2025-11-22 17:06:54] 2025-11-22 22:06:54,487 [wrapper] Test setup, not cleaning
[2025-11-22 17:06:54] 2025-11-22 22:06:54,491 [wrapper] apfmon messages muted
[2025-11-22 17:06:54] 2025-11-22 22:06:54,495 [wrapper] ==== wrapper stdout END ====
[2025-11-22 17:06:54] 2025-11-22 22:06:54,499 [wrapper] ==== wrapper stderr END ====
[2025-11-22 17:06:54]  *** Error codes and diagnostics ***
[2025-11-22 17:06:54]     "exeErrorCode": 0,
[2025-11-22 17:06:54]     "exeErrorDiag": "",
[2025-11-22 17:06:54]     "pilotErrorCode": 0,
[2025-11-22 17:06:54]     "pilotErrorDiag": "",
[2025-11-22 17:06:54]  *** Listing of results directory ***
[2025-11-22 17:06:54] total 1319308
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 11:36 queuedata.json
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 11:36 pilot3.tar.gz
[2025-11-22 17:06:54] -rwx------ 1 boincer umatlas     36292 Nov 21 11:38 runpilot2-wrapper.sh
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas       100 Nov 22 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 17:06:54] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 09:48 run_atlas
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas       105 Nov 22 09:48 job.xml
[2025-11-22 17:06:54] -rw-r--r-- 2 boincer umatlas 410094547 Nov 22 09:48 EVNT.47483658._000069.pool.root.1
[2025-11-22 17:06:54] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 09:48 start_atlas.sh
[2025-11-22 17:06:54] drwxrwx--x 2 boincer umatlas      4096 Nov 22 09:48 shared
[2025-11-22 17:06:54] -rw-r--r-- 2 boincer umatlas    590099 Nov 22 09:48 input.tar.gz
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas         0 Nov 22 09:48 boinc_lockfile
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas      2783 Nov 22 09:48 pandaJob.out
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas        57 Nov 22 09:48 setup.sh.local
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas    989768 Nov 22 09:49 agis_schedconf.cvmfs.json
[2025-11-22 17:06:54] drwx------ 5 boincer umatlas      4096 Nov 22 09:49 pilot3
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas       532 Nov 22 16:56 boinc_task_state.xml
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas      5955 Nov 22 17:03 init_data.xml
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas 925235291 Nov 22 17:05 HITS.47556137._000683.pool.root.1
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas      1064 Nov 22 17:05 memory_monitor_summary.json
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas   1526164 Nov 22 17:05 agis_ddmendpoints.agis.ALL.json
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas   2190730 Nov 22 17:05 log.47556137._000683.job.log.tgz.1
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas      8675 Nov 22 17:05 heartbeat.json
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas        95 Nov 22 17:06 pilot_heartbeat.json
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas        29 Nov 22 17:06 wrapper_checkpoint.txt
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 17:06 boinc_mmap_file
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas      4746 Nov 22 17:06 pilotlog.txt
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas   3667711 Nov 22 17:06 log.47556137._000683.job.log.1
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas       353 Nov 22 17:06 output.list
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas       620 Nov 22 17:06 runtime_log
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas   5877760 Nov 22 17:06 result.tar.gz
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas      9340 Nov 22 17:06 runtime_log.err
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas       669 Nov 22 17:06 BTqMDm8Kjg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvYJKDmdYWHFn.diag
[2025-11-22 17:06:54] -rw-r--r-- 1 boincer umatlas     21334 Nov 22 17:06 stderr.txt
[2025-11-22 17:06:54] HITS file was successfully produced:
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas 925235291 Nov 22 17:05 shared/HITS.pool.root.1
[2025-11-22 17:06:54]  *** Contents of shared directory: ***
[2025-11-22 17:06:54] total 1310380
[2025-11-22 17:06:54] -rw-r--r-- 2 boincer umatlas 410094547 Nov 22 09:48 ATLAS.root_0
[2025-11-22 17:06:54] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 09:48 start_atlas.sh
[2025-11-22 17:06:54] -rw-r--r-- 2 boincer umatlas    590099 Nov 22 09:48 input.tar.gz
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas 925235291 Nov 22 17:05 HITS.pool.root.1
[2025-11-22 17:06:54] -rw------- 1 boincer umatlas   5877760 Nov 22 17:06 result.tar.gz
17:06:56 (12818): run_atlas exited; CPU time 292665.941511
17:06:56 (12818): called boinc_finish(0)

</stderr_txt>
]]>

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