Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:31:33 (3946864): wrapper (7.7.26015): starting
00:31:33 (3946864): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 00:31:33] Arguments: --nthreads 3
[2025-11-25 00:31:33] Threads: 3
[2025-11-25 00:31:33] Checking for CVMFS
[2025-11-25 00:31:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:31:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:31:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:31:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:31:33] 2.9.2.0 2771396 8882 86392 153263 0 81 18621461 36864000 0 130560 0 3276502 99.918 477995 4697 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 00:31:33] CVMFS is ok
[2025-11-25 00:31:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:31:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:31:33] Further information can be found at the LHC@home message board.
[2025-11-25 00:31:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:31:33] Checking for apptainer binary...
[2025-11-25 00:31:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:31:33] Running /usr/bin/apptainer --version
[2025-11-25 00:31:33] apptainer version 1.4.1-1.1
[2025-11-25 00:31:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:31:33] atlasA217a
[2025-11-25 00:31:33] apptainer works
[2025-11-25 00:31:33] Set ATHENA_PROC_NUMBER=3
[2025-11-25 00:31:33] Set ATHENA_CORE_NUMBER=3
[2025-11-25 00:31:33] Starting ATLAS job with PandaID=6893935601
[2025-11-25 00:31:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 03:58:59]  *** The last 200 lines of the pilot log: ***
[2025-11-25 03:58:59] 2025-11-25 02:58:22,418 | INFO     | total number of processed events: 400 (read)
[2025-11-25 03:58:59] 2025-11-25 02:58:22,418 | INFO     | executing command: lscpu
[2025-11-25 03:58:59] 2025-11-25 02:58:22,433 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-25 03:58:59] 2025-11-25 02:58:24,155 | INFO     | time since job start (12406s) is within the limit (172800.0s)
[2025-11-25 03:58:59] 2025-11-25 02:58:24,500 | INFO     | monitor loop #949: job 0:6893935601 is in state 'finished'
[2025-11-25 03:58:59] 2025-11-25 02:58:24,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 03:58:59] 2025-11-25 02:58:26,160 | INFO     | time since job start (12408s) is within the limit (172800.0s)
[2025-11-25 03:58:59] 2025-11-25 02:58:26,638 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 03:58:59] 2025-11-25 02:58:26,639 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3588.0866666666666
[2025-11-25 03:58:59] 2025-11-25 02:58:26,640 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6893935601/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 03:58:59] 2025-11-25 02:58:26,640 | INFO     | extracted standard info from prmon json
[2025-11-25 03:58:59] 2025-11-25 02:58:26,640 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 03:58:59] 2025-11-25 02:58:26,640 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 03:58:59] 2025-11-25 02:58:26,640 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 03:58:59] 2025-11-25 02:58:26,640 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 03:58:59] 2025-11-25 02:58:26,642 | INFO     | fitting pss+swap vs Time
[2025-11-25 03:58:59] 2025-11-25 02:58:26,642 | INFO     | sum of square deviations: 2593916542.0
[2025-11-25 03:58:59] 2025-11-25 02:58:26,642 | INFO     | sum of deviations: -31609872734.999996
[2025-11-25 03:58:59] 2025-11-25 02:58:26,642 | INFO     | mean x: 1764033279.0
[2025-11-25 03:58:59] 2025-11-25 02:58:26,642 | INFO     | mean y: 2429968.724137931
[2025-11-25 03:58:59] 2025-11-25 02:58:26,642 | INFO     | intersect: 21499215446.063038
[2025-11-25 03:58:59] 2025-11-25 02:58:26,642 | INFO     | chi2: 1.783604203075946
[2025-11-25 03:58:59] 2025-11-25 02:58:26,643 | INFO     | sum of square deviations: 2406926989.5
[2025-11-25 03:58:59] 2025-11-25 02:58:26,643 | INFO     | sum of deviations: -30488092037.499996
[2025-11-25 03:58:59] 2025-11-25 02:58:26,643 | INFO     | mean x: 1764033126.5
[2025-11-25 03:58:59] 2025-11-25 02:58:26,643 | INFO     | mean y: 2430883.8434343436
[2025-11-25 03:58:59] 2025-11-25 02:58:26,643 | INFO     | intersect: 22347107125.60314
[2025-11-25 03:58:59] 2025-11-25 02:58:26,643 | INFO     | chi2: 1.779763475946032
[2025-11-25 03:58:59] 2025-11-25 02:58:26,643 | INFO     | current chi2=1.779763475946032 (change=0.21533516927637475 %)
[2025-11-25 03:58:59] 2025-11-25 02:58:26,643 | INFO     | right removable region: 197
[2025-11-25 03:58:59] 2025-11-25 02:58:26,643 | INFO     | sum of square deviations: 2406926989.5
[2025-11-25 03:58:59] 2025-11-25 02:58:26,644 | INFO     | sum of deviations: -60034930559.5
[2025-11-25 03:58:59] 2025-11-25 02:58:26,644 | INFO     | mean x: 1764033431.5
[2025-11-25 03:58:59] 2025-11-25 02:58:26,644 | INFO     | mean y: 2452854.378787879
[2025-11-25 03:58:59] 2025-11-25 02:58:26,644 | INFO     | intersect: 44001969676.756004
[2025-11-25 03:58:59] 2025-11-25 02:58:26,644 | INFO     | chi2: 0.2778430424438828
[2025-11-25 03:58:59] 2025-11-25 02:58:26,644 | INFO     | current chi2=0.2778430424438828 (change=84.422382389281 %)
[2025-11-25 03:58:59] 2025-11-25 02:58:26,644 | INFO     | sum of square deviations: 2229146912.0
[2025-11-25 03:58:59] 2025-11-25 02:58:26,644 | INFO     | sum of deviations: -53492313065.00001
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | mean x: 1764033584.0
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | mean y: 2447235.0103626945
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | intersect: 42333545389.43384
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | chi2: 0.27348695708536797
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | current chi2=0.27348695708536797 (change=1.5678223648139964 %)
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | left removable region: 20
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | sum of square deviations: 1719429448.0
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | sum of deviations: -36732585452.00001
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | mean x: 1764033706.0
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | mean y: 2434201.451977401
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | intersect: 37687911160.814415
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | chi2: 0.2375259763691095
[2025-11-25 03:58:59] 2025-11-25 02:58:26,645 | INFO     | current memory leak: -21.36 B/s (using 177 data points, chi2=0.24)
[2025-11-25 03:58:59] 2025-11-25 02:58:26,646 | INFO     | could have reported an average CPU frequency of 3832 MHz (10 samples)
[2025-11-25 03:58:59] 2025-11-25 02:58:26,646 | INFO     | ..............................
[2025-11-25 03:58:59] 2025-11-25 02:58:26,646 | INFO     | . Timing measurements:
[2025-11-25 03:58:59] 2025-11-25 02:58:26,646 | INFO     | . get job = 0 s
[2025-11-25 03:58:59] 2025-11-25 02:58:26,646 | INFO     | . initial setup = 1 s
[2025-11-25 03:58:59] 2025-11-25 02:58:26,646 | INFO     | . payload setup = 2 s
[2025-11-25 03:58:59] 2025-11-25 02:58:26,646 | INFO     | . stage-in = 0 s
[2025-11-25 03:58:59] 2025-11-25 02:58:26,646 | INFO     | . payload execution = 12378 s
[2025-11-25 03:58:59] 2025-11-25 02:58:26,646 | INFO     | . stage-out = 0 s
[2025-11-25 03:58:59] 2025-11-25 02:58:26,646 | INFO     | . log creation = 0 s
[2025-11-25 03:58:59] 2025-11-25 02:58:26,646 | INFO     | ..............................
[2025-11-25 03:58:59] 2025-11-25 02:58:27,040 | INFO     | 
[2025-11-25 03:58:59] 2025-11-25 02:58:27,040 | INFO     | job summary report
[2025-11-25 03:58:59] 2025-11-25 02:58:27,040 | INFO     | --------------------------------------------------
[2025-11-25 03:58:59] 2025-11-25 02:58:27,040 | INFO     | PanDA job id: 6893935601
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | task id: 47523634
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | errors: (none)
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | pilot state: finished 
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | transexitcode: 0
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | exeerrorcode: 0
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | exeerrordiag: 
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | exitcode: 0
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | exitmsg: OK
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | cpuconsumptiontime: 36403 s
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | nevents: 400
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | neventsw: 0
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | pid: 3957036
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | pgrp: 3957036
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | corecount: 3
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | event service: False
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | sizes: {0: 2283968, 2: 2284230, 11: 2284258, 12385: 2314366, 12387: 2323370, 12390: 2323426, 12395: 2323748}
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | --------------------------------------------------
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | 
[2025-11-25 03:58:59] 2025-11-25 02:58:27,041 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,057 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 03:58:59] 2025-11-25 02:58:27,058 | INFO     | job 6893935601 has completed (purged errors)
[2025-11-25 03:58:59] 2025-11-25 02:58:27,058 | INFO     | overall cleanup function is called
[2025-11-25 03:58:59] 2025-11-25 02:58:28,064 | INFO     | --- collectZombieJob: --- 10, [3957036]
[2025-11-25 03:58:59] 2025-11-25 02:58:28,064 | INFO     | zombie collector waiting for pid 3957036
[2025-11-25 03:58:59] 2025-11-25 02:58:28,065 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 03:58:59] 2025-11-25 02:58:28,065 | INFO     | collected zombie processes
[2025-11-25 03:58:59] 2025-11-25 02:58:28,065 | INFO     | will attempt to kill all subprocesses of pid=3957036
[2025-11-25 03:58:59] 2025-11-25 02:58:28,107 | INFO     | process IDs to be killed: [3957036] (in reverse order)
[2025-11-25 03:58:59] 2025-11-25 02:58:28,130 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 03:58:59] 2025-11-25 02:58:28,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 03:58:59] 2025-11-25 02:58:28,132 | INFO     | did not find any defunct processes belonging to 3957036
[2025-11-25 03:58:59] 2025-11-25 02:58:28,133 | INFO     | did not find any defunct processes belonging to 3957036
[2025-11-25 03:58:59] 2025-11-25 02:58:28,133 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 03:58:59] 2025-11-25 02:58:28,133 | INFO     | ready for new job
[2025-11-25 03:58:59] 2025-11-25 02:58:28,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 03:58:59] 2025-11-25 02:58:28,134 | INFO     | ***************************************
[2025-11-25 03:58:59] 2025-11-25 02:58:28,134 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 03:58:59] 2025-11-25 02:58:28,134 | INFO     | ***************************************
[2025-11-25 03:58:59] 2025-11-25 02:58:28,134 | INFO     | 
[2025-11-25 03:58:59] 2025-11-25 02:58:28,135 | INFO     | architecture information:
[2025-11-25 03:58:59] 2025-11-25 02:58:28,135 | INFO     | executing command: cat /etc/os-release
[2025-11-25 03:58:59] 2025-11-25 02:58:28,144 | INFO     | cat /etc/os-release:
[2025-11-25 03:58:59] NAME="CentOS Linux"
[2025-11-25 03:58:59] VERSION="7 (Core)"
[2025-11-25 03:58:59] ID="centos"
[2025-11-25 03:58:59] ID_LIKE="rhel fedora"
[2025-11-25 03:58:59] VERSION_ID="7"
[2025-11-25 03:58:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 03:58:59] ANSI_COLOR="0;31"
[2025-11-25 03:58:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 03:58:59] HOME_URL="https://www.centos.org/"
[2025-11-25 03:58:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 03:58:59] 
[2025-11-25 03:58:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 03:58:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 03:58:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 03:58:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 03:58:59] 
[2025-11-25 03:58:59] 2025-11-25 02:58:28,144 | INFO     | ***************************************
[2025-11-25 03:58:59] 2025-11-25 02:58:28,647 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 03:58:59] 2025-11-25 02:58:28,660 | INFO     | sufficient remaining disk space (340454801408 B)
[2025-11-25 03:58:59] 2025-11-25 02:58:28,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 03:58:59] 2025-11-25 02:58:28,660 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 03:58:59] 2025-11-25 02:58:28,660 | INFO     | update_server=False
[2025-11-25 03:58:59] 2025-11-25 02:58:28,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 03:58:59] 2025-11-25 02:58:28,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 03:58:59] 2025-11-25 02:58:28,661 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 03:58:59] 2025-11-25 02:58:28,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 03:58:59] 2025-11-25 02:58:28,661 | INFO     | aborting loop
[2025-11-25 03:58:59] 2025-11-25 02:58:28,769 | INFO     | all payload control threads have been joined
[2025-11-25 03:58:59] 2025-11-25 02:58:29,071 | INFO     | all job control threads have been joined
[2025-11-25 03:58:59] 2025-11-25 02:58:29,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 03:58:59] 2025-11-25 02:58:29,666 | INFO     | [job] retrieve thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:29,666 | INFO     | [job] queue monitor thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:29,667 | INFO     | [job] job monitor thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:29,674 | INFO     | all data control threads have been joined
[2025-11-25 03:58:59] 2025-11-25 02:58:29,706 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:29,726 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:29,770 | INFO     | [payload] control thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:30,077 | INFO     | [job] control thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:30,339 | INFO     | [payload] failed_post thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:30,522 | INFO     | [data] copytool_in thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:30,680 | INFO     | [data] control thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:30,929 | INFO     | [payload] validate_post thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:31,035 | INFO     | [job] validate thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:31,129 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:31,440 | INFO     | [data] copytool_out thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:32,667 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:39,712 | INFO     | job.realtimelogging is not enabled
[2025-11-25 03:58:59] 2025-11-25 02:58:40,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 03:58:59] 2025-11-25 02:58:52,072 | INFO     | [monitor] cgroup control has ended
[2025-11-25 03:58:59] 2025-11-25 02:58:52,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110841050944)>', '<ExcThread(monitor, started 140110045619968)>']
[2025-11-25 03:58:59] 2025-11-25 02:58:57,435 | INFO     | all workflow threads have been joined
[2025-11-25 03:58:59] 2025-11-25 02:58:57,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 03:58:59] 2025-11-25 02:58:57,436 | INFO     | traces error code: 0
[2025-11-25 03:58:59] 2025-11-25 02:58:57,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 03:58:59] 2025-11-25 02:58:59,272 | INFO     | PID=3950589 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 03:58:59] 2025-11-25 02:58:59,272 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 03:58:59] 2025-11-25 02:58:59,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 03:58:59] 2025-11-25 02:58:59,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 03:58:59] 2025-11-25 02:58:59,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 03:58:59] 2025-11-25 02:58:59,272 | CRITICAL | thread 'MainThread' is not alive
[2025-11-25 03:58:59] 2025-11-25 02:58:59,272 | INFO     | [monitor] control thread has ended
[2025-11-25 03:58:59] 2025-11-25 02:58:59,320 [wrapper] ==== pilot stdout END ====
[2025-11-25 03:58:59] 2025-11-25 02:58:59,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 03:58:59] 2025-11-25 02:58:59,324 [wrapper] pilotpid: 3950589
[2025-11-25 03:58:59] 2025-11-25 02:58:59,326 [wrapper] Pilot exit status: 0
[2025-11-25 03:58:59] 2025-11-25 02:58:59,334 [wrapper] pandaids: 6893935601
[2025-11-25 03:58:59] 2025-11-25 02:58:59,349 [wrapper] cleanup supervisor_pilot 3979632 3950590
[2025-11-25 03:58:59] 2025-11-25 02:58:59,351 [wrapper] Test setup, not cleaning
[2025-11-25 03:58:59] 2025-11-25 02:58:59,353 [wrapper] apfmon messages muted
[2025-11-25 03:58:59] 2025-11-25 02:58:59,356 [wrapper] ==== wrapper stdout END ====
[2025-11-25 03:58:59] 2025-11-25 02:58:59,358 [wrapper] ==== wrapper stderr END ====
[2025-11-25 03:58:59]  *** Error codes and diagnostics ***
[2025-11-25 03:58:59]     "exeErrorCode": 0,
[2025-11-25 03:58:59]     "exeErrorDiag": "",
[2025-11-25 03:58:59]     "pilotErrorCode": 0,
[2025-11-25 03:58:59]     "pilotErrorDiag": "",
[2025-11-25 03:58:59]  *** Listing of results directory ***
[2025-11-25 03:58:59] total 626768
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc    576529 Nov 21 10:27 pilot3.tar.gz
[2025-11-25 03:58:59] -rwx------ 1 boinc boinc     36292 Nov 21 10:32 runpilot2-wrapper.sh
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc      5112 Nov 21 10:32 queuedata.json
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc       100 Nov 25 00:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 03:58:59] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 00:31 run_atlas
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc       105 Nov 25 00:31 job.xml
[2025-11-25 03:58:59] -rw-r--r-- 2 boinc boinc 301644512 Nov 25 00:31 EVNT.47523632._000005.pool.root.1
[2025-11-25 03:58:59] drwxrwx--x 2 boinc boinc      4096 Nov 25 00:31 shared
[2025-11-25 03:58:59] -rw-r--r-- 2 boinc boinc    589947 Nov 25 00:31 input.tar.gz
[2025-11-25 03:58:59] -rw-r--r-- 2 boinc boinc     15847 Nov 25 00:31 start_atlas.sh
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc         0 Nov 25 00:31 boinc_setup_complete
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc      6445 Nov 25 00:31 init_data.xml
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc         0 Nov 25 00:31 boinc_lockfile
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc      2631 Nov 25 00:31 pandaJob.out
[2025-11-25 03:58:59] -rw------- 1 boinc boinc    991801 Nov 25 00:31 agis_schedconf.cvmfs.json
[2025-11-25 03:58:59] drwx------ 5 boinc boinc      4096 Nov 25 00:31 pilot3
[2025-11-25 03:58:59] -rw------- 1 boinc boinc 332032183 Nov 25 03:57 HITS.47523634._000111.pool.root.1
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc       530 Nov 25 03:57 boinc_task_state.xml
[2025-11-25 03:58:59] -rw------- 1 boinc boinc      1020 Nov 25 03:58 memory_monitor_summary.json
[2025-11-25 03:58:59] -rw------- 1 boinc boinc   1516227 Nov 25 03:58 agis_ddmendpoints.agis.ALL.json
[2025-11-25 03:58:59] -rw------- 1 boinc boinc    357977 Nov 25 03:58 log.47523634._000111.job.log.tgz.1
[2025-11-25 03:58:59] -rw------- 1 boinc boinc      7768 Nov 25 03:58 heartbeat.json
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc        28 Nov 25 03:58 wrapper_checkpoint.txt
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc      8192 Nov 25 03:58 boinc_mmap_file
[2025-11-25 03:58:59] -rw------- 1 boinc boinc       817 Nov 25 03:58 pilotlog.txt
[2025-11-25 03:58:59] -rw------- 1 boinc boinc        95 Nov 25 03:58 pilot_heartbeat.json
[2025-11-25 03:58:59] -rw------- 1 boinc boinc   1755809 Nov 25 03:58 log.47523634._000111.job.log.1
[2025-11-25 03:58:59] -rw------- 1 boinc boinc       357 Nov 25 03:58 output.list
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc       620 Nov 25 03:58 runtime_log
[2025-11-25 03:58:59] -rw------- 1 boinc boinc   2129920 Nov 25 03:58 result.tar.gz
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc      8918 Nov 25 03:58 runtime_log.err
[2025-11-25 03:58:59] -rw------- 1 boinc boinc       665 Nov 25 03:58 EyoLDmDgcg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgFJKDmCrHLdm.diag
[2025-11-25 03:58:59] -rw-r--r-- 1 boinc boinc     21409 Nov 25 03:58 stderr.txt
[2025-11-25 03:58:59] HITS file was successfully produced:
[2025-11-25 03:58:59] -rw------- 1 boinc boinc 332032183 Nov 25 03:57 shared/HITS.pool.root.1
[2025-11-25 03:58:59]  *** Contents of shared directory: ***
[2025-11-25 03:58:59] total 621512
[2025-11-25 03:58:59] -rw-r--r-- 2 boinc boinc 301644512 Nov 25 00:31 ATLAS.root_0
[2025-11-25 03:58:59] -rw-r--r-- 2 boinc boinc    589947 Nov 25 00:31 input.tar.gz
[2025-11-25 03:58:59] -rw-r--r-- 2 boinc boinc     15847 Nov 25 00:31 start_atlas.sh
[2025-11-25 03:58:59] -rw------- 1 boinc boinc 332032183 Nov 25 03:57 HITS.pool.root.1
[2025-11-25 03:58:59] -rw------- 1 boinc boinc   2129920 Nov 25 03:58 result.tar.gz
03:59:01 (3946864): run_atlas exited; CPU time 36452.481871
03:59:01 (3946864): called boinc_finish(0)

</stderr_txt>
]]>

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