Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:26:13 (1943889): wrapper (7.7.26015): starting
09:26:13 (1943889): wrapper: running run_atlas (--nthreads 9)
[2025-11-22 09:26:13] Arguments: --nthreads 9
[2025-11-22 09:26:13] Threads: 9
[2025-11-22 09:26:13] Checking for CVMFS
[2025-11-22 09:26:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 09:26:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 09:26:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 09:26:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 09:26:13] 2.13.3.0 3025293 3310 89696 153174 0 83 10666343 37030913 1882 16776704 0 3763987 99.854 580325 15203 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 09:26:13] CVMFS is ok
[2025-11-22 09:26:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 09:26:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 09:26:13] Further information can be found at the LHC@home message board.
[2025-11-22 09:26:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 09:26:13] Checking for apptainer binary...
[2025-11-22 09:26:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 09:26:13] Running /usr/bin/apptainer --version
[2025-11-22 09:26:13] apptainer version 1.4.4-1.el9
[2025-11-22 09:26:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 09:26:13] c-205-37.aglt2.org
[2025-11-22 09:26:13] apptainer works
[2025-11-22 09:26:13] Set ATHENA_PROC_NUMBER=9
[2025-11-22 09:26:13] Set ATHENA_CORE_NUMBER=9
[2025-11-22 09:26:13] Starting ATLAS job with PandaID=6891596288
[2025-11-22 09:26:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 18:06:19]  *** The last 200 lines of the pilot log: ***
[2025-11-22 18:06:19] 2025-11-22 23:05:20,317 | INFO     | monitor loop #2312: job 0:6891596288 is in state 'finished'
[2025-11-22 18:06:19] 2025-11-22 23:05:20,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 18:06:19] 2025-11-22 23:05:21,395 | INFO     | time since job start (31138s) is within the limit (172800.0s)
[2025-11-22 18:06:19] 2025-11-22 23:05:22,524 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 18:06:19] 2025-11-22 23:05:22,530 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2617.8528125000003
[2025-11-22 18:06:19] 2025-11-22 23:05:22,536 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891596288/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 18:06:19] 2025-11-22 23:05:22,537 | INFO     | extracted standard info from prmon json
[2025-11-22 18:06:19] 2025-11-22 23:05:22,537 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 18:06:19] 2025-11-22 23:05:22,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 18:06:19] 2025-11-22 23:05:22,542 | INFO     | fitting pss+swap vs Time
[2025-11-22 18:06:19] 2025-11-22 23:05:22,543 | INFO     | sum of square deviations: 41132210080.17442
[2025-11-22 18:06:19] 2025-11-22 23:05:22,547 | INFO     | sum of deviations: 600832661325.8348
[2025-11-22 18:06:19] 2025-11-22 23:05:22,547 | INFO     | mean x: 1763837131.5509803
[2025-11-22 18:06:19] 2025-11-22 23:05:22,547 | INFO     | mean y: 3115559.9294117647
[2025-11-22 18:06:19] 2025-11-22 23:05:22,547 | INFO     | intersect: -25761873868.778866
[2025-11-22 18:06:19] 2025-11-22 23:05:22,547 | INFO     | chi2: 4.206271241024533
[2025-11-22 18:06:19] 2025-11-22 23:05:22,548 | INFO     | sum of square deviations: 39934251362.66155
[2025-11-22 18:06:19] 2025-11-22 23:05:22,551 | INFO     | sum of deviations: 745309426660.5228
[2025-11-22 18:06:19] 2025-11-22 23:05:22,552 | INFO     | mean x: 1763836979.051485
[2025-11-22 18:06:19] 2025-11-22 23:05:22,552 | INFO     | mean y: 3133918.9029702973
[2025-11-22 18:06:19] 2025-11-22 23:05:22,552 | INFO     | intersect: -32916084113.781708
[2025-11-22 18:06:19] 2025-11-22 23:05:22,552 | INFO     | chi2: 1.9670373343318626
[2025-11-22 18:06:19] 2025-11-22 23:05:22,552 | INFO     | current chi2=1.9670373343318626 (change=53.235604134441274 %)
[2025-11-22 18:06:19] 2025-11-22 23:05:22,553 | INFO     | sum of square deviations: 38759781457.647606
[2025-11-22 18:06:19] 2025-11-22 23:05:22,556 | INFO     | sum of deviations: 733849978768.4559
[2025-11-22 18:06:19] 2025-11-22 23:05:22,556 | INFO     | mean x: 1763836826.552
[2025-11-22 18:06:19] 2025-11-22 23:05:22,556 | INFO     | mean y: 3132427.944
[2025-11-22 18:06:19] 2025-11-22 23:05:22,557 | INFO     | intersect: -33392092442.727
[2025-11-22 18:06:19] 2025-11-22 23:05:22,557 | INFO     | chi2: 1.9583599662034528
[2025-11-22 18:06:19] 2025-11-22 23:05:22,557 | INFO     | current chi2=1.9583599662034528 (change=0.4411389645208344 %)
[2025-11-22 18:06:19] 2025-11-22 23:05:22,557 | INFO     | right removable region: 499
[2025-11-22 18:06:19] 2025-11-22 23:05:22,557 | INFO     | sum of square deviations: 39934235502.66155
[2025-11-22 18:06:19] 2025-11-22 23:05:22,561 | INFO     | sum of deviations: 470426909928.1622
[2025-11-22 18:06:19] 2025-11-22 23:05:22,561 | INFO     | mean x: 1763837284.051485
[2025-11-22 18:06:19] 2025-11-22 23:05:22,561 | INFO     | mean y: 3132107.9168316834
[2025-11-22 18:06:19] 2025-11-22 23:05:22,561 | INFO     | intersect: -20774942461.63691
[2025-11-22 18:06:19] 2025-11-22 23:05:22,562 | INFO     | chi2: 2.37355998189924
[2025-11-22 18:06:19] 2025-11-22 23:05:22,562 | INFO     | current chi2=2.37355998189924 (change=43.570924320108624 %)
[2025-11-22 18:06:19] 2025-11-22 23:05:22,562 | INFO     | sum of square deviations: 38759749737.647606
[2025-11-22 18:06:19] 2025-11-22 23:05:22,566 | INFO     | sum of deviations: 437354397581.31256
[2025-11-22 18:06:19] 2025-11-22 23:05:22,566 | INFO     | mean x: 1763837436.552
[2025-11-22 18:06:19] 2025-11-22 23:05:22,566 | INFO     | mean y: 3136397.988
[2025-11-22 18:06:19] 2025-11-22 23:05:22,566 | INFO     | intersect: -19899522022.566227
[2025-11-22 18:06:19] 2025-11-22 23:05:22,567 | INFO     | chi2: 2.3411935561138426
[2025-11-22 18:06:19] 2025-11-22 23:05:22,567 | INFO     | current chi2=2.3411935561138426 (change=1.3636236721306194 %)
[2025-11-22 18:06:19] 2025-11-22 23:05:22,567 | INFO     | left removable region: 20
[2025-11-22 18:06:19] 2025-11-22 23:05:22,567 | INFO     | sum of square deviations: 34078283689.895676
[2025-11-22 18:06:19] 2025-11-22 23:05:22,570 | INFO     | sum of deviations: 530796436699.0378
[2025-11-22 18:06:19] 2025-11-22 23:05:22,571 | INFO     | mean x: 1763837406.0480168
[2025-11-22 18:06:19] 2025-11-22 23:05:22,571 | INFO     | mean y: 3158944.3027139874
[2025-11-22 18:06:19] 2025-11-22 23:05:22,571 | INFO     | intersect: -27470014838.928596
[2025-11-22 18:06:19] 2025-11-22 23:05:22,571 | INFO     | chi2: 0.07191883822238647
[2025-11-22 18:06:19] 2025-11-22 23:05:22,571 | INFO     | current memory leak: 15.58 B/s (using 479 data points, chi2=0.07)
[2025-11-22 18:06:19] 2025-11-22 23:05:22,572 | INFO     | could have reported an average CPU frequency of 2616 MHz (21 samples)
[2025-11-22 18:06:19] 2025-11-22 23:05:22,572 | INFO     | ..............................
[2025-11-22 18:06:19] 2025-11-22 23:05:22,572 | INFO     | . Timing measurements:
[2025-11-22 18:06:19] 2025-11-22 23:05:22,572 | INFO     | . get job = 0 s
[2025-11-22 18:06:19] 2025-11-22 23:05:22,572 | INFO     | . initial setup = 2 s
[2025-11-22 18:06:19] 2025-11-22 23:05:22,572 | INFO     | . payload setup = 4 s
[2025-11-22 18:06:19] 2025-11-22 23:05:22,572 | INFO     | . stage-in = 0 s
[2025-11-22 18:06:19] 2025-11-22 23:05:22,572 | INFO     | . payload execution = 31108 s
[2025-11-22 18:06:19] 2025-11-22 23:05:22,572 | INFO     | . stage-out = 3 s
[2025-11-22 18:06:19] 2025-11-22 23:05:22,572 | INFO     | . log creation = 0 s
[2025-11-22 18:06:19] 2025-11-22 23:05:22,572 | INFO     | ..............................
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | 
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | job summary report
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | --------------------------------------------------
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | PanDA job id: 6891596288
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | task id: 47493068
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | errors: (none)
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | pilot state: finished 
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | transexitcode: 0
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | exeerrorcode: 0
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | exeerrordiag: 
[2025-11-22 18:06:19] 2025-11-22 23:05:22,626 | INFO     | exitcode: 0
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | exitmsg: OK
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | cpuconsumptiontime: 275579 s
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | nevents: 1000
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | neventsw: 0
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | pid: 1954048
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | pgrp: 1954048
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | corecount: 9
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | event service: False
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | sizes: {0: 2298795, 1: 2298795, 4: 2299085, 11: 2299113, 31113: 2338380, 31118: 2347558, 31123: 2347748}
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | --------------------------------------------------
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | 
[2025-11-22 18:06:19] 2025-11-22 23:05:22,627 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 18:06:19] 2025-11-22 23:05:22,638 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,640 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 18:06:19] 2025-11-22 23:05:22,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,640 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 18:06:19] 2025-11-22 23:05:22,640 | INFO     | job 6891596288 has completed (purged errors)
[2025-11-22 18:06:19] 2025-11-22 23:05:22,641 | INFO     | overall cleanup function is called
[2025-11-22 18:06:19] 2025-11-22 23:05:23,656 | INFO     | --- collectZombieJob: --- 10, [1954048]
[2025-11-22 18:06:19] 2025-11-22 23:05:23,656 | INFO     | zombie collector waiting for pid 1954048
[2025-11-22 18:06:19] 2025-11-22 23:05:23,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 18:06:19] 2025-11-22 23:05:23,657 | INFO     | collected zombie processes
[2025-11-22 18:06:19] 2025-11-22 23:05:23,657 | INFO     | will attempt to kill all subprocesses of pid=1954048
[2025-11-22 18:06:19] 2025-11-22 23:05:23,848 | INFO     | process IDs to be killed: [1954048] (in reverse order)
[2025-11-22 18:06:19] 2025-11-22 23:05:23,904 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 18:06:19] 2025-11-22 23:05:23,904 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 18:06:19] 2025-11-22 23:05:23,911 | INFO     | did not find any defunct processes belonging to 1954048
[2025-11-22 18:06:19] 2025-11-22 23:05:23,917 | INFO     | did not find any defunct processes belonging to 1954048
[2025-11-22 18:06:19] 2025-11-22 23:05:23,918 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 18:06:19] 2025-11-22 23:05:23,919 | INFO     | ready for new job
[2025-11-22 18:06:19] 2025-11-22 23:05:23,919 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 18:06:19] 2025-11-22 23:05:23,922 | INFO     | ***************************************
[2025-11-22 18:06:19] 2025-11-22 23:05:23,922 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 18:06:19] 2025-11-22 23:05:23,922 | INFO     | ***************************************
[2025-11-22 18:06:19] 2025-11-22 23:05:23,922 | INFO     | 
[2025-11-22 18:06:19] 2025-11-22 23:05:23,924 | INFO     | architecture information:
[2025-11-22 18:06:19] 2025-11-22 23:05:23,925 | INFO     | executing command: cat /etc/os-release
[2025-11-22 18:06:19] 2025-11-22 23:05:23,938 | INFO     | cat /etc/os-release:
[2025-11-22 18:06:19] NAME="CentOS Linux"
[2025-11-22 18:06:19] VERSION="7 (Core)"
[2025-11-22 18:06:19] ID="centos"
[2025-11-22 18:06:19] ID_LIKE="rhel fedora"
[2025-11-22 18:06:19] VERSION_ID="7"
[2025-11-22 18:06:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 18:06:19] ANSI_COLOR="0;31"
[2025-11-22 18:06:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 18:06:19] HOME_URL="https://www.centos.org/"
[2025-11-22 18:06:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 18:06:19] 
[2025-11-22 18:06:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 18:06:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 18:06:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 18:06:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 18:06:19] 
[2025-11-22 18:06:19] 2025-11-22 23:05:23,938 | INFO     | ***************************************
[2025-11-22 18:06:19] 2025-11-22 23:05:24,441 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 18:06:19] 2025-11-22 23:05:24,450 | INFO     | sufficient remaining disk space (39107690496 B)
[2025-11-22 18:06:19] 2025-11-22 23:05:24,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 18:06:19] 2025-11-22 23:05:24,451 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 18:06:19] 2025-11-22 23:05:24,451 | INFO     | update_server=False
[2025-11-22 18:06:19] 2025-11-22 23:05:24,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 18:06:19] 2025-11-22 23:05:24,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 18:06:19] 2025-11-22 23:05:24,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:06:19] 2025-11-22 23:05:24,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:06:19] 2025-11-22 23:05:24,452 | INFO     | aborting loop
[2025-11-22 18:06:19] 2025-11-22 23:05:24,626 | INFO     | all job control threads have been joined
[2025-11-22 18:06:19] 2025-11-22 23:05:24,998 | INFO     | all data control threads have been joined
[2025-11-22 18:06:19] 2025-11-22 23:05:25,331 | INFO     | all payload control threads have been joined
[2025-11-22 18:06:19] 2025-11-22 23:05:25,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 18:06:19] 2025-11-22 23:05:25,456 | INFO     | [job] queue monitor thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:25,456 | INFO     | [job] retrieve thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:25,457 | INFO     | [job] job monitor thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:25,631 | INFO     | [job] control thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:25,765 | INFO     | [data] copytool_in thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:25,984 | INFO     | [job] validate thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:25,991 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:26,004 | INFO     | [data] control thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:26,280 | INFO     | [payload] validate_post thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:26,337 | INFO     | [payload] control thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:26,468 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:26,515 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:26,722 | INFO     | [payload] failed_post thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:26,859 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:27,360 | INFO     | [data] copytool_out thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:28,457 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 18:06:19] 2025-11-22 23:05:54,706 | INFO     | PID=1947589 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 18:06:19] 2025-11-22 23:05:54,706 | INFO     | .. there are 3 such processes running
[2025-11-22 18:06:19] 2025-11-22 23:05:54,707 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 18:06:19] 2025-11-22 23:05:54,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 18:06:19] 2025-11-22 23:05:54,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 18:06:19] 2025-11-22 23:06:12,637 | INFO     | [monitor] cgroup control has ended
[2025-11-22 18:06:19] 2025-11-22 23:06:13,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139994898048832)>', '<ExcThread(monitor, started 139994182182656)>']
[2025-11-22 18:06:19] 2025-11-22 23:06:14,803 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 18:06:19] 2025-11-22 23:06:14,804 | INFO     | [monitor] control thread has ended
[2025-11-22 18:06:19] 2025-11-22 23:06:18,869 | INFO     | all workflow threads have been joined
[2025-11-22 18:06:19] 2025-11-22 23:06:18,869 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 18:06:19] 2025-11-22 23:06:18,870 | INFO     | traces error code: 0
[2025-11-22 18:06:19] 2025-11-22 23:06:18,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 18:06:19] 2025-11-22 23:06:18,979 [wrapper] ==== pilot stdout END ====
[2025-11-22 18:06:19] 2025-11-22 23:06:18,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 18:06:19] 2025-11-22 23:06:18,984 [wrapper] pilotpid: 1947589
[2025-11-22 18:06:19] 2025-11-22 23:06:18,986 [wrapper] Pilot exit status: 0
[2025-11-22 18:06:19] 2025-11-22 23:06:18,994 [wrapper] pandaids: 6891596288
[2025-11-22 18:06:19] 2025-11-22 23:06:19,032 [wrapper] cleanup supervisor_pilot 2404393 1947590
[2025-11-22 18:06:19] 2025-11-22 23:06:19,035 [wrapper] Test setup, not cleaning
[2025-11-22 18:06:19] 2025-11-22 23:06:19,037 [wrapper] apfmon messages muted
[2025-11-22 18:06:19] 2025-11-22 23:06:19,039 [wrapper] ==== wrapper stdout END ====
[2025-11-22 18:06:19] 2025-11-22 23:06:19,042 [wrapper] ==== wrapper stderr END ====
[2025-11-22 18:06:19]  *** Error codes and diagnostics ***
[2025-11-22 18:06:19]     "exeErrorCode": 0,
[2025-11-22 18:06:19]     "exeErrorDiag": "",
[2025-11-22 18:06:19]     "pilotErrorCode": 0,
[2025-11-22 18:06:19]     "pilotErrorDiag": "",
[2025-11-22 18:06:19]  *** Listing of results directory ***
[2025-11-22 18:06:19] total 1312248
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 13:36 pilot3.tar.gz
[2025-11-22 18:06:19] -rwx------. 1 boincer umatlas     36292 Nov 18 13:43 runpilot2-wrapper.sh
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 13:43 queuedata.json
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas       100 Nov 22 09:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 18:06:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 09:26 run_atlas
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas       105 Nov 22 09:26 job.xml
[2025-11-22 18:06:19] -rw-r--r--. 2 boincer umatlas 409034890 Nov 22 09:26 EVNT.47493065._000774.pool.root.1
[2025-11-22 18:06:19] -rw-r--r--. 2 boincer umatlas     15120 Nov 22 09:26 start_atlas.sh
[2025-11-22 18:06:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 09:26 shared
[2025-11-22 18:06:19] -rw-r--r--. 2 boincer umatlas    590093 Nov 22 09:26 input.tar.gz
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas         0 Nov 22 09:26 boinc_lockfile
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas      2772 Nov 22 09:26 pandaJob.out
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas    989768 Nov 22 09:26 agis_schedconf.cvmfs.json
[2025-11-22 18:06:19] drwx------. 5 boincer umatlas      4096 Nov 22 09:26 pilot3
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas       532 Nov 22 17:59 boinc_task_state.xml
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas      6530 Nov 22 18:02 init_data.xml
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas 918059793 Nov 22 18:04 HITS.47493068._006390.pool.root.1
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas      1044 Nov 22 18:05 memory_monitor_summary.json
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas   1526164 Nov 22 18:05 agis_ddmendpoints.agis.ALL.json
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas   1917729 Nov 22 18:05 log.47493068._006390.job.log.tgz.1
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas      8632 Nov 22 18:05 heartbeat.json
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas        95 Nov 22 18:05 pilot_heartbeat.json
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 18:06 boinc_mmap_file
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas      4823 Nov 22 18:06 pilotlog.txt
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas        29 Nov 22 18:06 wrapper_checkpoint.txt
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas   4440439 Nov 22 18:06 log.47493068._006390.job.log.1
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas       353 Nov 22 18:06 output.list
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas       620 Nov 22 18:06 runtime_log
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas   6379520 Nov 22 18:06 result.tar.gz
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas      8704 Nov 22 18:06 runtime_log.err
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas       659 Nov 22 18:06 g0jMDm6qff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZJGKDmIbaiUo.diag
[2025-11-22 18:06:19] -rw-r--r--. 1 boincer umatlas     21301 Nov 22 18:06 stderr.txt
[2025-11-22 18:06:19] HITS file was successfully produced:
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas 918059793 Nov 22 18:04 shared/HITS.pool.root.1
[2025-11-22 18:06:19]  *** Contents of shared directory: ***
[2025-11-22 18:06:19] total 1302832
[2025-11-22 18:06:19] -rw-r--r--. 2 boincer umatlas 409034890 Nov 22 09:26 ATLAS.root_0
[2025-11-22 18:06:19] -rw-r--r--. 2 boincer umatlas     15120 Nov 22 09:26 start_atlas.sh
[2025-11-22 18:06:19] -rw-r--r--. 2 boincer umatlas    590093 Nov 22 09:26 input.tar.gz
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas 918059793 Nov 22 18:04 HITS.pool.root.1
[2025-11-22 18:06:19] -rw-------. 1 boincer umatlas   6379520 Nov 22 18:06 result.tar.gz
18:06:20 (1943889): run_atlas exited; CPU time 275889.426980
18:06:20 (1943889): called boinc_finish(0)

</stderr_txt>
]]>

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