Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:19:42 (654516): wrapper (7.7.26015): starting
05:19:42 (654516): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 05:19:42] Arguments: --nthreads 3
[2025-11-25 05:19:42] Threads: 3
[2025-11-25 05:19:42] Checking for CVMFS
[2025-11-25 05:19:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:19:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:19:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:19:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:19:42] 2.9.2.0 3581133 9418 100720 153270 1 80 27799350 36864001 0 130560 0 3501803 99.844 601576 7052 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 05:19:42] CVMFS is ok
[2025-11-25 05:19:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 05:19:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 05:19:42] Further information can be found at the LHC@home message board.
[2025-11-25 05:19:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:19:42] Checking for apptainer binary...
[2025-11-25 05:19:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:19:42] Running /usr/bin/apptainer --version
[2025-11-25 05:19:42] apptainer version 1.4.1-1.1
[2025-11-25 05:19:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:19:42] magicA250a
[2025-11-25 05:19:42] apptainer works
[2025-11-25 05:19:42] Set ATHENA_PROC_NUMBER=3
[2025-11-25 05:19:42] Set ATHENA_CORE_NUMBER=3
[2025-11-25 05:19:42] Starting ATLAS job with PandaID=6895327979
[2025-11-25 05:19:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 13:28:25]  *** The last 200 lines of the pilot log: ***
[2025-11-25 13:28:25] 2025-11-25 12:27:48,298 | INFO     | ***************************************
[2025-11-25 13:28:25] 2025-11-25 12:27:48,298 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 13:28:25] 2025-11-25 12:27:48,298 | INFO     | ***************************************
[2025-11-25 13:28:25] 2025-11-25 12:27:48,298 | INFO     | 
[2025-11-25 13:28:25] 2025-11-25 12:27:48,299 | INFO     | architecture information:
[2025-11-25 13:28:25] 2025-11-25 12:27:48,299 | INFO     | executing command: cat /etc/os-release
[2025-11-25 13:28:25] 2025-11-25 12:27:48,307 | INFO     | cat /etc/os-release:
[2025-11-25 13:28:25] NAME="CentOS Linux"
[2025-11-25 13:28:25] VERSION="7 (Core)"
[2025-11-25 13:28:25] ID="centos"
[2025-11-25 13:28:25] ID_LIKE="rhel fedora"
[2025-11-25 13:28:25] VERSION_ID="7"
[2025-11-25 13:28:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 13:28:25] ANSI_COLOR="0;31"
[2025-11-25 13:28:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 13:28:25] HOME_URL="https://www.centos.org/"
[2025-11-25 13:28:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 13:28:25] 
[2025-11-25 13:28:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 13:28:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 13:28:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 13:28:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 13:28:25] 
[2025-11-25 13:28:25] 2025-11-25 12:27:48,308 | INFO     | ***************************************
[2025-11-25 13:28:25] 2025-11-25 12:27:48,811 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 13:28:25] 2025-11-25 12:27:48,822 | INFO     | sufficient remaining disk space (329365061632 B)
[2025-11-25 13:28:25] 2025-11-25 12:27:48,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 13:28:25] 2025-11-25 12:27:48,823 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 13:28:25] 2025-11-25 12:27:48,823 | INFO     | update_server=False
[2025-11-25 13:28:25] 2025-11-25 12:27:48,823 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 13:28:25] 2025-11-25 12:27:48,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:28:25] 2025-11-25 12:27:49,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 13:28:25] 2025-11-25 12:27:49,160 | INFO     | all payload control threads have been joined
[2025-11-25 13:28:25] 2025-11-25 12:27:49,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 13:28:25] 2025-11-25 12:27:49,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:28:25] 2025-11-25 12:27:49,618 | INFO     | aborting loop
[2025-11-25 13:28:25] 2025-11-25 12:27:49,661 | INFO     | all data control threads have been joined
[2025-11-25 13:28:25] 2025-11-25 12:27:49,828 | INFO     | [job] queue monitor thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:49,829 | INFO     | [job] retrieve thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:49,958 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:50,036 | INFO     | [payload] validate_post thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:50,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:50,166 | INFO     | [payload] control thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:50,436 | INFO     | all job control threads have been joined
[2025-11-25 13:28:25] 2025-11-25 12:27:50,577 | INFO     | [data] copytool_in thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:50,623 | INFO     | [job] job monitor thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:50,667 | INFO     | [data] control thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:50,911 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:51,152 | INFO     | [data] copytool_out thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:51,197 | INFO     | [job] validate thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:51,215 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:51,375 | INFO     | [payload] failed_post thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:51,442 | INFO     | [job] control thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:27:53,359 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 13:28:25] 2025-11-25 12:28:18,499 | INFO     | PID=658240 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 13:28:25] 2025-11-25 12:28:18,500 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 13:28:25] 2025-11-25 12:28:18,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 13:28:25] 2025-11-25 12:28:18,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 13:28:25] 2025-11-25 12:28:20,535 | INFO     | [monitor] cgroup control has ended
[2025-11-25 13:28:25] 2025-11-25 12:28:20,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140551227320128)>', '<ExcThread(monitor, started 140550472701696)>']
[2025-11-25 13:28:25] 2025-11-25 12:28:21,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 13:28:25] 2025-11-25 12:28:21,516 | INFO     | [monitor] control thread has ended
[2025-11-25 13:28:25] 2025-11-25 12:28:25,699 | INFO     | all workflow threads have been joined
[2025-11-25 13:28:25] 2025-11-25 12:28:25,699 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 13:28:25] 2025-11-25 12:28:25,700 | INFO     | traces error code: 0
[2025-11-25 13:28:25] 2025-11-25 12:28:25,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 13:28:25] 2025-11-25 12:28:25,750 [wrapper] ==== pilot stdout END ====
[2025-11-25 13:28:25] 2025-11-25 12:28:25,752 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 13:28:25] 2025-11-25 12:28:25,755 [wrapper] pilotpid: 658240
[2025-11-25 13:28:25] 2025-11-25 12:28:25,757 [wrapper] Pilot exit status: 0
[2025-11-25 13:28:25] 2025-11-25 12:28:25,765 [wrapper] pandaids: 6895327979
[2025-11-25 13:28:25] 2025-11-25 12:28:25,780 [wrapper] cleanup supervisor_pilot  716051 658241
[2025-11-25 13:28:25] 2025-11-25 12:28:25,782 [wrapper] Test setup, not cleaning
[2025-11-25 13:28:25] 2025-11-25 12:28:25,785 [wrapper] apfmon messages muted
[2025-11-25 13:28:25] 2025-11-25 12:28:25,787 [wrapper] ==== wrapper stdout END ====
[2025-11-25 13:28:25] 2025-11-25 12:28:25,789 [wrapper] ==== wrapper stderr END ====
[2025-11-25 13:28:25]  *** Error codes and diagnostics ***
[2025-11-25 13:28:25]     "exeErrorCode": 0,
[2025-11-25 13:28:25]     "exeErrorDiag": "",
[2025-11-25 13:28:25]     "pilotErrorCode": 0,
[2025-11-25 13:28:25]     "pilotErrorDiag": "",
[2025-11-25 13:28:25]  *** Listing of results directory ***
[2025-11-25 13:28:25] total 1312604
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc    576529 Nov 21 16:53 pilot3.tar.gz
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc      5112 Nov 21 17:05 queuedata.json
[2025-11-25 13:28:25] -rwx------ 1 boinc boinc     36292 Nov 21 17:05 runpilot2-wrapper.sh
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc       100 Nov 25 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 13:28:25] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 05:19 run_atlas
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc       105 Nov 25 05:19 job.xml
[2025-11-25 13:28:25] -rw-r--r-- 2 boinc boinc 411509342 Nov 25 05:19 EVNT.47483658._000056.pool.root.1
[2025-11-25 13:28:25] -rw-r--r-- 2 boinc boinc    590096 Nov 25 05:19 input.tar.gz
[2025-11-25 13:28:25] -rw-r--r-- 2 boinc boinc     15847 Nov 25 05:19 start_atlas.sh
[2025-11-25 13:28:25] drwxrwx--x 2 boinc boinc      4096 Nov 25 05:19 shared
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc         0 Nov 25 05:19 boinc_setup_complete
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc      6443 Nov 25 05:19 init_data.xml
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc         0 Nov 25 05:19 boinc_lockfile
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc      2783 Nov 25 05:19 pandaJob.out
[2025-11-25 13:28:25] -rw------- 1 boinc boinc    991801 Nov 25 05:19 agis_schedconf.cvmfs.json
[2025-11-25 13:28:25] drwx------ 5 boinc boinc      4096 Nov 25 05:19 pilot3
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc       531 Nov 25 13:23 boinc_task_state.xml
[2025-11-25 13:28:25] -rw------- 1 boinc boinc 918183643 Nov 25 13:27 HITS.47556137._000558.pool.root.1
[2025-11-25 13:28:25] -rw------- 1 boinc boinc      1028 Nov 25 13:27 memory_monitor_summary.json
[2025-11-25 13:28:25] -rw------- 1 boinc boinc   1516240 Nov 25 13:27 agis_ddmendpoints.agis.ALL.json
[2025-11-25 13:28:25] -rw------- 1 boinc boinc   1176775 Nov 25 13:27 log.47556137._000558.job.log.tgz.1
[2025-11-25 13:28:25] -rw------- 1 boinc boinc      8563 Nov 25 13:27 heartbeat.json
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc        28 Nov 25 13:28 wrapper_checkpoint.txt
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc      8192 Nov 25 13:28 boinc_mmap_file
[2025-11-25 13:28:25] -rw------- 1 boinc boinc        95 Nov 25 13:28 pilot_heartbeat.json
[2025-11-25 13:28:25] -rw------- 1 boinc boinc      4751 Nov 25 13:28 pilotlog.txt
[2025-11-25 13:28:25] -rw------- 1 boinc boinc   4072502 Nov 25 13:28 log.47556137._000558.job.log.1
[2025-11-25 13:28:25] -rw------- 1 boinc boinc       353 Nov 25 13:28 output.list
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc       620 Nov 25 13:28 runtime_log
[2025-11-25 13:28:25] -rw------- 1 boinc boinc   5273600 Nov 25 13:28 result.tar.gz
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc      8918 Nov 25 13:28 runtime_log.err
[2025-11-25 13:28:25] -rw------- 1 boinc boinc       669 Nov 25 13:28 3OWKDm0oig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJXJKDmdCLFVo.diag
[2025-11-25 13:28:25] -rw-r--r-- 1 boinc boinc      9328 Nov 25 13:28 stderr.txt
[2025-11-25 13:28:25] HITS file was successfully produced:
[2025-11-25 13:28:25] -rw------- 1 boinc boinc 918183643 Nov 25 13:27 shared/HITS.pool.root.1
[2025-11-25 13:28:25]  *** Contents of shared directory: ***
[2025-11-25 13:28:25] total 1304288
[2025-11-25 13:28:25] -rw-r--r-- 2 boinc boinc 411509342 Nov 25 05:19 ATLAS.root_0
[2025-11-25 13:28:25] -rw-r--r-- 2 boinc boinc    590096 Nov 25 05:19 input.tar.gz
[2025-11-25 13:28:25] -rw-r--r-- 2 boinc boinc     15847 Nov 25 05:19 start_atlas.sh
[2025-11-25 13:28:25] -rw------- 1 boinc boinc 918183643 Nov 25 13:27 HITS.pool.root.1
[2025-11-25 13:28:25] -rw------- 1 boinc boinc   5273600 Nov 25 13:28 result.tar.gz
13:28:26 (654516): run_atlas exited; CPU time 86386.883040
13:28:26 (654516): called boinc_finish(0)

</stderr_txt>
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