Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:33:42 (1207261): wrapper (7.7.26015): starting
07:33:42 (1207261): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 07:33:42] Arguments: --nthreads 3
[2025-11-25 07:33:42] Threads: 3
[2025-11-25 07:33:42] Checking for CVMFS
[2025-11-25 07:33:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 07:33:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 07:33:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 07:33:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 07:33:43] 2.9.2.0 4065016 9440 86432 153273 1 81 34426187 36864000 0 130560 0 3522682 99.922 495253 7550 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 07:33:43] CVMFS is ok
[2025-11-25 07:33:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 07:33:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 07:33:43] Further information can be found at the LHC@home message board.
[2025-11-25 07:33:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 07:33:43] Checking for apptainer binary...
[2025-11-25 07:33:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 07:33:43] Running /usr/bin/apptainer --version
[2025-11-25 07:33:43] apptainer version 1.4.1-1.1
[2025-11-25 07:33:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 07:33:43] thA312a
[2025-11-25 07:33:43] apptainer works
[2025-11-25 07:33:43] Set ATHENA_PROC_NUMBER=3
[2025-11-25 07:33:43] Set ATHENA_CORE_NUMBER=3
[2025-11-25 07:33:43] Starting ATLAS job with PandaID=6895328009
[2025-11-25 07:33:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:33:25]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:33:25] 2025-11-25 14:32:30,571 | INFO     | 
[2025-11-25 15:33:25] 2025-11-25 14:32:30,571 | INFO     | architecture information:
[2025-11-25 15:33:25] 2025-11-25 14:32:30,572 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:33:25] 2025-11-25 14:32:30,581 | INFO     | cat /etc/os-release:
[2025-11-25 15:33:25] NAME="CentOS Linux"
[2025-11-25 15:33:25] VERSION="7 (Core)"
[2025-11-25 15:33:25] ID="centos"
[2025-11-25 15:33:25] ID_LIKE="rhel fedora"
[2025-11-25 15:33:25] VERSION_ID="7"
[2025-11-25 15:33:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:33:25] ANSI_COLOR="0;31"
[2025-11-25 15:33:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:33:25] HOME_URL="https://www.centos.org/"
[2025-11-25 15:33:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:33:25] 
[2025-11-25 15:33:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:33:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:33:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:33:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:33:25] 
[2025-11-25 15:33:25] 2025-11-25 14:32:30,581 | INFO     | ***************************************
[2025-11-25 15:33:25] 2025-11-25 14:32:31,085 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 15:33:25] 2025-11-25 14:32:31,099 | INFO     | sufficient remaining disk space (266689576960 B)
[2025-11-25 15:33:25] 2025-11-25 14:32:31,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:33:25] 2025-11-25 14:32:31,099 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:33:25] 2025-11-25 14:32:31,099 | INFO     | update_server=False
[2025-11-25 15:33:25] 2025-11-25 14:32:31,099 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:33:25] 2025-11-25 14:32:31,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:33:25] 2025-11-25 14:32:31,099 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:33:25] 2025-11-25 14:32:31,100 | INFO     | aborting loop
[2025-11-25 15:33:25] 2025-11-25 14:32:31,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:33:25] 2025-11-25 14:32:31,435 | INFO     | all payload control threads have been joined
[2025-11-25 15:33:25] 2025-11-25 14:32:32,068 | INFO     | all data control threads have been joined
[2025-11-25 15:33:25] 2025-11-25 14:32:32,105 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:32,105 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:32,105 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:32,139 | INFO     | all job control threads have been joined
[2025-11-25 15:33:25] 2025-11-25 14:32:32,239 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:32,440 | INFO     | [payload] control thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:32,580 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:32,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:33:25] 2025-11-25 14:32:32,703 | INFO     | [job] validate thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:32,766 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:32,898 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:33,053 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:33,074 | INFO     | [data] control thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:33,106 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:33,145 | INFO     | [job] control thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:33,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:33,573 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:32:36,598 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:33:25] 2025-11-25 14:33:01,460 | INFO     | PID=1210985 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 15:33:25] 2025-11-25 14:33:01,461 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:33:25] 2025-11-25 14:33:01,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:33:25] 2025-11-25 14:33:01,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:33:25] 2025-11-25 14:33:19,365 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:33:25] 2025-11-25 14:33:20,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047076267840)>', '<ExcThread(monitor, started 140045973440256)>']
[2025-11-25 15:33:25] 2025-11-25 14:33:20,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:33:25] 2025-11-25 14:33:20,559 | INFO     | [monitor] control thread has ended
[2025-11-25 15:33:25] 2025-11-25 14:33:25,397 | INFO     | all workflow threads have been joined
[2025-11-25 15:33:25] 2025-11-25 14:33:25,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:33:25] 2025-11-25 14:33:25,397 | INFO     | traces error code: 0
[2025-11-25 15:33:25] 2025-11-25 14:33:25,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:33:25] 2025-11-25 14:33:25,451 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:33:25] 2025-11-25 14:33:25,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:33:25] 2025-11-25 14:33:25,456 [wrapper] pilotpid: 1210985
[2025-11-25 15:33:25] 2025-11-25 14:33:25,459 [wrapper] Pilot exit status: 0
[2025-11-25 15:33:25] 2025-11-25 14:33:25,466 [wrapper] pandaids: 6895328009
[2025-11-25 15:33:25] 2025-11-25 14:33:25,485 [wrapper] cleanup supervisor_pilot 1271443 1210986
[2025-11-25 15:33:25] 2025-11-25 14:33:25,488 [wrapper] Test setup, not cleaning
[2025-11-25 15:33:25] 2025-11-25 14:33:25,491 [wrapper] apfmon messages muted
[2025-11-25 15:33:25] 2025-11-25 14:33:25,493 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:33:25] 2025-11-25 14:33:25,495 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:33:25]  *** Error codes and diagnostics ***
[2025-11-25 15:33:25]     "exeErrorCode": 0,
[2025-11-25 15:33:25]     "exeErrorDiag": "",
[2025-11-25 15:33:25]     "pilotErrorCode": 0,
[2025-11-25 15:33:25]     "pilotErrorDiag": "",
[2025-11-25 15:33:25]  *** Listing of results directory ***
[2025-11-25 15:33:25] total 1319268
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc    576529 Nov 21 16:53 pilot3.tar.gz
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc      5112 Nov 21 17:11 queuedata.json
[2025-11-25 15:33:25] -rwx------ 1 boinc boinc     36292 Nov 21 17:14 runpilot2-wrapper.sh
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc       100 Nov 25 07:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:33:25] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 07:33 run_atlas
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc       105 Nov 25 07:33 job.xml
[2025-11-25 15:33:25] -rw-r--r-- 2 boinc boinc 411796506 Nov 25 07:33 EVNT.47483658._000059.pool.root.1
[2025-11-25 15:33:25] -rw-r--r-- 2 boinc boinc    590100 Nov 25 07:33 input.tar.gz
[2025-11-25 15:33:25] -rw-r--r-- 2 boinc boinc     15847 Nov 25 07:33 start_atlas.sh
[2025-11-25 15:33:25] drwxrwx--x 2 boinc boinc      4096 Nov 25 07:33 shared
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc         0 Nov 25 07:33 boinc_setup_complete
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc      6448 Nov 25 07:33 init_data.xml
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc         0 Nov 25 07:33 boinc_lockfile
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc      2783 Nov 25 07:33 pandaJob.out
[2025-11-25 15:33:25] -rw------- 1 boinc boinc    991801 Nov 25 07:33 agis_schedconf.cvmfs.json
[2025-11-25 15:33:25] drwx------ 5 boinc boinc      4096 Nov 25 07:33 pilot3
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc       532 Nov 25 15:29 boinc_task_state.xml
[2025-11-25 15:33:25] -rw------- 1 boinc boinc 924803712 Nov 25 15:32 HITS.47556137._000588.pool.root.1
[2025-11-25 15:33:25] -rw------- 1 boinc boinc      1022 Nov 25 15:32 memory_monitor_summary.json
[2025-11-25 15:33:25] -rw------- 1 boinc boinc   1516240 Nov 25 15:32 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:33:25] -rw------- 1 boinc boinc   1171174 Nov 25 15:32 log.47556137._000588.job.log.tgz.1
[2025-11-25 15:33:25] -rw------- 1 boinc boinc        95 Nov 25 15:32 pilot_heartbeat.json
[2025-11-25 15:33:25] -rw------- 1 boinc boinc      8558 Nov 25 15:32 heartbeat.json
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc      8192 Nov 25 15:33 boinc_mmap_file
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc        28 Nov 25 15:33 wrapper_checkpoint.txt
[2025-11-25 15:33:25] -rw------- 1 boinc boinc      4752 Nov 25 15:33 pilotlog.txt
[2025-11-25 15:33:25] -rw------- 1 boinc boinc   4040188 Nov 25 15:33 log.47556137._000588.job.log.1
[2025-11-25 15:33:25] -rw------- 1 boinc boinc       353 Nov 25 15:33 output.list
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc       620 Nov 25 15:33 runtime_log
[2025-11-25 15:33:25] -rw------- 1 boinc boinc   5232640 Nov 25 15:33 result.tar.gz
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc      8903 Nov 25 15:33 runtime_log.err
[2025-11-25 15:33:25] -rw------- 1 boinc boinc       666 Nov 25 15:33 6GdLDmFxig8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMjHKDm2j26Do.diag
[2025-11-25 15:33:25] -rw-r--r-- 1 boinc boinc      9031 Nov 25 15:33 stderr.txt
[2025-11-25 15:33:25] HITS file was successfully produced:
[2025-11-25 15:33:25] -rw------- 1 boinc boinc 924803712 Nov 25 15:32 shared/HITS.pool.root.1
[2025-11-25 15:33:25]  *** Contents of shared directory: ***
[2025-11-25 15:33:25] total 1310992
[2025-11-25 15:33:25] -rw-r--r-- 2 boinc boinc 411796506 Nov 25 07:33 ATLAS.root_0
[2025-11-25 15:33:25] -rw-r--r-- 2 boinc boinc    590100 Nov 25 07:33 input.tar.gz
[2025-11-25 15:33:25] -rw-r--r-- 2 boinc boinc     15847 Nov 25 07:33 start_atlas.sh
[2025-11-25 15:33:25] -rw------- 1 boinc boinc 924803712 Nov 25 15:32 HITS.pool.root.1
[2025-11-25 15:33:25] -rw------- 1 boinc boinc   5232640 Nov 25 15:33 result.tar.gz
15:33:26 (1207261): run_atlas exited; CPU time 84843.388233
15:33:26 (1207261): called boinc_finish(0)

</stderr_txt>
]]>

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