Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:33:20 (1726590): wrapper (7.7.26015): starting
02:33:20 (1726590): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 02:33:20] Arguments: --nthreads 12
[2025-11-25 02:33:20] Threads: 12
[2025-11-25 02:33:20] Checking for CVMFS
[2025-11-25 02:33:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:33:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:33:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:33:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:33:21] 2.13.3.0 11850 4962 81296 153265 3 90 3575951 4097025 843 130560 0 3955429 99.991 168828 22311 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 02:33:21] CVMFS is ok
[2025-11-25 02:33:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 02:33:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 02:33:21] Further information can be found at the LHC@home message board.
[2025-11-25 02:33:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:33:21] Checking for apptainer binary...
[2025-11-25 02:33:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 02:33:21] Running /usr/bin/apptainer --version
[2025-11-25 02:33:21] apptainer version 1.4.4-1.el9
[2025-11-25 02:33:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:33:21] pckelar1.cern.ch
[2025-11-25 02:33:21] apptainer works
[2025-11-25 02:33:21] Set ATHENA_PROC_NUMBER=12
[2025-11-25 02:33:21] Set ATHENA_CORE_NUMBER=12
[2025-11-25 02:33:21] Starting ATLAS job with PandaID=6895328084
[2025-11-25 02:33:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 14:24:46]  *** The last 200 lines of the pilot log: ***
[2025-11-25 14:24:46] 2025-11-25 13:23:52,066 | INFO     | PID=1730442 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 14:24:46] 2025-11-25 13:23:52,066 | INFO     | .. there are 2 such processes running
[2025-11-25 14:24:46] 2025-11-25 13:23:52,452 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 14:24:46] 2025-11-25 13:23:52,458 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2816.6575833333322
[2025-11-25 14:24:46] 2025-11-25 13:23:52,463 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6895328084/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 14:24:46] 2025-11-25 13:23:52,464 | INFO     | extracted standard info from prmon json
[2025-11-25 14:24:46] 2025-11-25 13:23:52,464 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 14:24:46] 2025-11-25 13:23:52,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 14:24:46] 2025-11-25 13:23:52,485 | INFO     | fitting pss+swap vs Time
[2025-11-25 14:24:46] 2025-11-25 13:23:52,486 | INFO     | sum of square deviations: 105902549274.84396
[2025-11-25 14:24:46] 2025-11-25 13:23:52,502 | INFO     | sum of deviations: 1673347873528.8933
[2025-11-25 14:24:46] 2025-11-25 13:23:52,502 | INFO     | mean x: 1764055727.8855507
[2025-11-25 14:24:46] 2025-11-25 13:23:52,502 | INFO     | mean y: 3570608.573676681
[2025-11-25 14:24:46] 2025-11-25 13:23:52,503 | INFO     | intersect: -27869968992.280277
[2025-11-25 14:24:46] 2025-11-25 13:23:52,504 | INFO     | chi2: 6.2424229895698655
[2025-11-25 14:24:46] 2025-11-25 13:23:52,505 | INFO     | sum of square deviations: 103646351573.395
[2025-11-25 14:24:46] 2025-11-25 13:23:52,521 | INFO     | sum of deviations: 1969279372037.962
[2025-11-25 14:24:46] 2025-11-25 13:23:52,521 | INFO     | mean x: 1764055575.3919308
[2025-11-25 14:24:46] 2025-11-25 13:23:52,521 | INFO     | mean y: 3590597.886167147
[2025-11-25 14:24:46] 2025-11-25 13:23:52,521 | INFO     | intersect: -33513443074.90939
[2025-11-25 14:24:46] 2025-11-25 13:23:52,522 | INFO     | chi2: 2.8440186368407403
[2025-11-25 14:24:46] 2025-11-25 13:23:52,523 | INFO     | current chi2=2.8440186368407403 (change=54.44046900390024 %)
[2025-11-25 14:24:46] 2025-11-25 13:23:52,524 | INFO     | sum of square deviations: 101422349246.47604
[2025-11-25 14:24:46] 2025-11-25 13:23:52,540 | INFO     | sum of deviations: 1997780947294.6003
[2025-11-25 14:24:46] 2025-11-25 13:23:52,540 | INFO     | mean x: 1764055422.8955007
[2025-11-25 14:24:46] 2025-11-25 13:23:52,540 | INFO     | mean y: 3592534.3555878084
[2025-11-25 14:24:46] 2025-11-25 13:23:52,541 | INFO     | intersect: -34744136541.29289
[2025-11-25 14:24:46] 2025-11-25 13:23:52,542 | INFO     | chi2: 2.5654584016467137
[2025-11-25 14:24:46] 2025-11-25 13:23:52,542 | INFO     | current chi2=2.5654584016467137 (change=9.794599500355716 %)
[2025-11-25 14:24:46] 2025-11-25 13:23:52,542 | INFO     | right removable region: 688
[2025-11-25 14:24:46] 2025-11-25 13:23:52,543 | INFO     | sum of square deviations: 103646016379.17728
[2025-11-25 14:24:46] 2025-11-25 13:23:52,560 | INFO     | sum of deviations: 1423266833291.9592
[2025-11-25 14:24:46] 2025-11-25 13:23:52,560 | INFO     | mean x: 1764055880.3904898
[2025-11-25 14:24:46] 2025-11-25 13:23:52,560 | INFO     | mean y: 3587485.387608069
[2025-11-25 14:24:46] 2025-11-25 13:23:52,560 | INFO     | intersect: -24220423377.202976
[2025-11-25 14:24:46] 2025-11-25 13:23:52,561 | INFO     | chi2: 3.9742339954322268
[2025-11-25 14:24:46] 2025-11-25 13:23:52,561 | INFO     | current chi2=3.9742339954322268 (change=36.33507370339107 %)
[2025-11-25 14:24:46] 2025-11-25 13:23:52,563 | INFO     | sum of square deviations: 101421932741.61731
[2025-11-25 14:24:46] 2025-11-25 13:23:52,578 | INFO     | sum of deviations: 1338385395324.6626
[2025-11-25 14:24:46] 2025-11-25 13:23:52,578 | INFO     | mean x: 1764056032.8896952
[2025-11-25 14:24:46] 2025-11-25 13:23:52,578 | INFO     | mean y: 3593304.008708273
[2025-11-25 14:24:46] 2025-11-25 13:23:52,579 | INFO     | intersect: -23275265293.26122
[2025-11-25 14:24:46] 2025-11-25 13:23:52,580 | INFO     | chi2: 3.8672826000872953
[2025-11-25 14:24:46] 2025-11-25 13:23:52,580 | INFO     | current chi2=3.8672826000872953 (change=2.6911197344659556 %)
[2025-11-25 14:24:46] 2025-11-25 13:23:52,580 | INFO     | left removable region: 20
[2025-11-25 14:24:46] 2025-11-25 13:23:52,581 | INFO     | sum of square deviations: 92428298670.28015
[2025-11-25 14:24:46] 2025-11-25 13:23:52,596 | INFO     | sum of deviations: 1540804656421.4236
[2025-11-25 14:24:46] 2025-11-25 13:23:52,596 | INFO     | mean x: 1764056002.3997006
[2025-11-25 14:24:46] 2025-11-25 13:23:52,596 | INFO     | mean y: 3623931.125748503
[2025-11-25 14:24:46] 2025-11-25 13:23:52,597 | INFO     | intersect: -29403665197.734966
[2025-11-25 14:24:46] 2025-11-25 13:23:52,598 | INFO     | chi2: 0.11333596776696306
[2025-11-25 14:24:46] 2025-11-25 13:23:52,598 | INFO     | current memory leak: 16.67 B/s (using 668 data points, chi2=0.11)
[2025-11-25 14:24:46] 2025-11-25 13:23:52,599 | INFO     | could have reported an average CPU frequency of 2801 MHz (27 samples)
[2025-11-25 14:24:46] 2025-11-25 13:23:52,599 | INFO     | ..............................
[2025-11-25 14:24:46] 2025-11-25 13:23:52,599 | INFO     | . Timing measurements:
[2025-11-25 14:24:46] 2025-11-25 13:23:52,600 | INFO     | . get job = 0 s
[2025-11-25 14:24:46] 2025-11-25 13:23:52,600 | INFO     | . initial setup = 1 s
[2025-11-25 14:24:46] 2025-11-25 13:23:52,600 | INFO     | . payload setup = 7 s
[2025-11-25 14:24:46] 2025-11-25 13:23:52,600 | INFO     | . stage-in = 0 s
[2025-11-25 14:24:46] 2025-11-25 13:23:52,600 | INFO     | . payload execution = 42585 s
[2025-11-25 14:24:46] 2025-11-25 13:23:52,600 | INFO     | . stage-out = 1 s
[2025-11-25 14:24:46] 2025-11-25 13:23:52,600 | INFO     | . log creation = 0 s
[2025-11-25 14:24:46] 2025-11-25 13:23:52,601 | INFO     | ..............................
[2025-11-25 14:24:46] 2025-11-25 13:23:52,759 | INFO     | 
[2025-11-25 14:24:46] 2025-11-25 13:23:52,759 | INFO     | job summary report
[2025-11-25 14:24:46] 2025-11-25 13:23:52,759 | INFO     | --------------------------------------------------
[2025-11-25 14:24:46] 2025-11-25 13:23:52,759 | INFO     | PanDA job id: 6895328084
[2025-11-25 14:24:46] 2025-11-25 13:23:52,760 | INFO     | task id: 47556137
[2025-11-25 14:24:46] 2025-11-25 13:23:52,760 | INFO     | errors: (none)
[2025-11-25 14:24:46] 2025-11-25 13:23:52,760 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 14:24:46] 2025-11-25 13:23:52,760 | INFO     | pilot state: finished 
[2025-11-25 14:24:46] 2025-11-25 13:23:52,760 | INFO     | transexitcode: 0
[2025-11-25 14:24:46] 2025-11-25 13:23:52,760 | INFO     | exeerrorcode: 0
[2025-11-25 14:24:46] 2025-11-25 13:23:52,760 | INFO     | exeerrordiag: 
[2025-11-25 14:24:46] 2025-11-25 13:23:52,760 | INFO     | exitcode: 0
[2025-11-25 14:24:46] 2025-11-25 13:23:52,761 | INFO     | exitmsg: OK
[2025-11-25 14:24:46] 2025-11-25 13:23:52,761 | INFO     | cpuconsumptiontime: 498178 s
[2025-11-25 14:24:46] 2025-11-25 13:23:52,761 | INFO     | nevents: 1000
[2025-11-25 14:24:46] 2025-11-25 13:23:52,761 | INFO     | neventsw: 0
[2025-11-25 14:24:46] 2025-11-25 13:23:52,761 | INFO     | pid: 1737952
[2025-11-25 14:24:46] 2025-11-25 13:23:52,761 | INFO     | pgrp: 1737952
[2025-11-25 14:24:46] 2025-11-25 13:23:52,761 | INFO     | corecount: 12
[2025-11-25 14:24:46] 2025-11-25 13:23:52,761 | INFO     | event service: False
[2025-11-25 14:24:46] 2025-11-25 13:23:52,762 | INFO     | sizes: {0: 2284255, 1: 2284283, 5: 2284545, 12: 2284601, 42597: 2329541, 42599: 2338724, 42606: 2338914}
[2025-11-25 14:24:46] 2025-11-25 13:23:52,762 | INFO     | --------------------------------------------------
[2025-11-25 14:24:46] 2025-11-25 13:23:52,762 | INFO     | 
[2025-11-25 14:24:46] 2025-11-25 13:23:52,762 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-25 14:24:46] 2025-11-25 13:23:52,781 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,782 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,782 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,782 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,782 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,783 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,783 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,783 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,783 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,783 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,783 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,784 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,784 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,784 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,785 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 14:24:46] 2025-11-25 13:23:52,785 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,785 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 14:24:46] 2025-11-25 13:23:52,785 | INFO     | job 6895328084 has completed (purged errors)
[2025-11-25 14:24:46] 2025-11-25 13:23:52,785 | INFO     | overall cleanup function is called
[2025-11-25 14:24:46] 2025-11-25 13:23:53,806 | INFO     | --- collectZombieJob: --- 10, [1737952]
[2025-11-25 14:24:46] 2025-11-25 13:23:53,806 | INFO     | zombie collector waiting for pid 1737952
[2025-11-25 14:24:46] 2025-11-25 13:23:53,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 14:24:46] 2025-11-25 13:23:53,807 | INFO     | collected zombie processes
[2025-11-25 14:24:46] 2025-11-25 13:23:53,807 | INFO     | will attempt to kill all subprocesses of pid=1737952
[2025-11-25 14:24:46] 2025-11-25 13:23:53,994 | INFO     | process IDs to be killed: [1737952] (in reverse order)
[2025-11-25 14:24:46] 2025-11-25 13:23:54,050 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 14:24:46] 2025-11-25 13:23:54,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 14:24:46] 2025-11-25 13:23:54,059 | INFO     | did not find any defunct processes belonging to 1737952
[2025-11-25 14:24:46] 2025-11-25 13:23:54,066 | INFO     | did not find any defunct processes belonging to 1737952
[2025-11-25 14:24:46] 2025-11-25 13:23:54,068 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 14:24:46] 2025-11-25 13:23:54,068 | INFO     | ready for new job
[2025-11-25 14:24:46] 2025-11-25 13:23:54,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 14:24:46] 2025-11-25 13:23:54,071 | INFO     | ***************************************
[2025-11-25 14:24:46] 2025-11-25 13:23:54,071 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 14:24:46] 2025-11-25 13:23:54,072 | INFO     | ***************************************
[2025-11-25 14:24:46] 2025-11-25 13:23:54,072 | INFO     | 
[2025-11-25 14:24:46] 2025-11-25 13:23:54,073 | INFO     | architecture information:
[2025-11-25 14:24:46] 2025-11-25 13:23:54,074 | INFO     | executing command: cat /etc/os-release
[2025-11-25 14:24:46] 2025-11-25 13:23:54,089 | INFO     | cat /etc/os-release:
[2025-11-25 14:24:46] NAME="CentOS Linux"
[2025-11-25 14:24:46] VERSION="7 (Core)"
[2025-11-25 14:24:46] ID="centos"
[2025-11-25 14:24:46] ID_LIKE="rhel fedora"
[2025-11-25 14:24:46] VERSION_ID="7"
[2025-11-25 14:24:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 14:24:46] ANSI_COLOR="0;31"
[2025-11-25 14:24:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 14:24:46] HOME_URL="https://www.centos.org/"
[2025-11-25 14:24:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 14:24:46] 
[2025-11-25 14:24:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 14:24:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 14:24:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 14:24:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 14:24:46] 
[2025-11-25 14:24:46] 2025-11-25 13:23:54,090 | INFO     | ***************************************
[2025-11-25 14:24:46] 2025-11-25 13:23:54,593 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-25 14:24:46] 2025-11-25 13:23:54,609 | INFO     | sufficient remaining disk space (777623961600 B)
[2025-11-25 14:24:46] 2025-11-25 13:23:54,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 14:24:46] 2025-11-25 13:23:54,609 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 14:24:46] 2025-11-25 13:23:54,610 | INFO     | update_server=False
[2025-11-25 14:24:46] 2025-11-25 13:23:54,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 14:24:46] 2025-11-25 13:23:54,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:24:46] 2025-11-25 13:23:54,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:24:46] 2025-11-25 13:23:54,611 | INFO     | aborting loop
[2025-11-25 14:24:46] 2025-11-25 13:23:55,002 | INFO     | all payload control threads have been joined
[2025-11-25 14:24:46] 2025-11-25 13:23:55,155 | INFO     | all job control threads have been joined
[2025-11-25 14:24:46] 2025-11-25 13:23:55,558 | INFO     | all data control threads have been joined
[2025-11-25 14:24:46] 2025-11-25 13:23:55,613 | INFO     | [job] queue monitor thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:55,615 | INFO     | [job] retrieve thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:55,616 | INFO     | [job] job monitor thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:55,666 | INFO     | [payload] validate_post thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:55,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 14:24:46] 2025-11-25 13:23:55,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 14:24:46] 2025-11-25 13:23:55,943 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:55,943 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:56,007 | INFO     | [payload] control thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:56,024 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:56,134 | INFO     | [data] copytool_in thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:56,160 | INFO     | [job] control thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:56,563 | INFO     | [data] control thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:56,728 | INFO     | [payload] failed_post thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:56,945 | INFO     | [job] validate thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:57,687 | INFO     | [data] copytool_out thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:23:59,772 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:24:05,207 | INFO     | job.realtimelogging is not enabled
[2025-11-25 14:24:46] 2025-11-25 13:24:06,213 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 14:24:46] 2025-11-25 13:24:24,358 | INFO     | PID=1730442 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 14:24:46] 2025-11-25 13:24:24,358 | INFO     | .. there are 2 such processes running
[2025-11-25 14:24:46] 2025-11-25 13:24:24,359 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 14:24:46] 2025-11-25 13:24:24,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 14:24:46] 2025-11-25 13:24:24,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 14:24:46] 2025-11-25 13:24:40,323 | INFO     | [monitor] cgroup control has ended
[2025-11-25 14:24:46] 2025-11-25 13:24:41,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092818995008)>', '<ExcThread(monitor, started 140091959797504)>']
[2025-11-25 14:24:46] 2025-11-25 13:24:42,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 14:24:46] 2025-11-25 13:24:42,435 | INFO     | [monitor] control thread has ended
[2025-11-25 14:24:46] 2025-11-25 13:24:46,574 | INFO     | all workflow threads have been joined
[2025-11-25 14:24:46] 2025-11-25 13:24:46,574 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 14:24:46] 2025-11-25 13:24:46,575 | INFO     | traces error code: 0
[2025-11-25 14:24:46] 2025-11-25 13:24:46,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 14:24:46] 2025-11-25 13:24:46,692 [wrapper] ==== pilot stdout END ====
[2025-11-25 14:24:46] 2025-11-25 13:24:46,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 14:24:46] 2025-11-25 13:24:46,698 [wrapper] pilotpid: 1730442
[2025-11-25 14:24:46] 2025-11-25 13:24:46,701 [wrapper] Pilot exit status: 0
[2025-11-25 14:24:46] 2025-11-25 13:24:46,710 [wrapper] pandaids: 6895328084
[2025-11-25 14:24:46] 2025-11-25 13:24:46,748 [wrapper] cleanup supervisor_pilot 1968018 1730443
[2025-11-25 14:24:46] 2025-11-25 13:24:46,751 [wrapper] Test setup, not cleaning
[2025-11-25 14:24:46] 2025-11-25 13:24:46,753 [wrapper] apfmon messages muted
[2025-11-25 14:24:46] 2025-11-25 13:24:46,756 [wrapper] ==== wrapper stdout END ====
[2025-11-25 14:24:46] 2025-11-25 13:24:46,759 [wrapper] ==== wrapper stderr END ====
[2025-11-25 14:24:46]  *** Error codes and diagnostics ***
[2025-11-25 14:24:46]     "exeErrorCode": 0,
[2025-11-25 14:24:46]     "exeErrorDiag": "",
[2025-11-25 14:24:46]     "pilotErrorCode": 0,
[2025-11-25 14:24:46]     "pilotErrorDiag": "",
[2025-11-25 14:24:46]  *** Listing of results directory ***
[2025-11-25 14:24:46] total 1308236
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc      5112 Nov 21 17:14 queuedata.json
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc    576529 Nov 21 17:16 pilot3.tar.gz
[2025-11-25 14:24:46] -rwx------ 1 boinc boinc     36292 Nov 21 17:20 runpilot2-wrapper.sh
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc       100 Nov 25 02:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 14:24:46] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 02:33 run_atlas
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc       105 Nov 25 02:33 job.xml
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc      6295 Nov 25 02:33 init_data.xml
[2025-11-25 14:24:46] -rw-r--r-- 2 boinc boinc 411165397 Nov 25 02:33 EVNT.47483658._000062.pool.root.1
[2025-11-25 14:24:46] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:33 start_atlas.sh
[2025-11-25 14:24:46] drwxrwx--x 2 boinc boinc        68 Nov 25 02:33 shared
[2025-11-25 14:24:46] -rw-r--r-- 2 boinc boinc    590096 Nov 25 02:33 input.tar.gz
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc         0 Nov 25 02:33 boinc_lockfile
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc      2783 Nov 25 02:33 pandaJob.out
[2025-11-25 14:24:46] -rw------- 1 boinc boinc    991801 Nov 25 02:33 agis_schedconf.cvmfs.json
[2025-11-25 14:24:46] drwx------ 5 boinc boinc      4096 Nov 25 02:33 pilot3
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc       533 Nov 25 14:16 boinc_task_state.xml
[2025-11-25 14:24:46] -rw------- 1 boinc boinc 907684489 Nov 25 14:23 HITS.47556137._000612.pool.root.1
[2025-11-25 14:24:46] -rw------- 1 boinc boinc      1038 Nov 25 14:23 memory_monitor_summary.json
[2025-11-25 14:24:46] -rw------- 1 boinc boinc   1516240 Nov 25 14:23 agis_ddmendpoints.agis.ALL.json
[2025-11-25 14:24:46] -rw------- 1 boinc boinc   2392761 Nov 25 14:23 log.47556137._000612.job.log.tgz.1
[2025-11-25 14:24:46] -rw------- 1 boinc boinc      8607 Nov 25 14:23 heartbeat.json
[2025-11-25 14:24:46] -rw------- 1 boinc boinc        95 Nov 25 14:24 pilot_heartbeat.json
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc      8192 Nov 25 14:24 boinc_mmap_file
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc        29 Nov 25 14:24 wrapper_checkpoint.txt
[2025-11-25 14:24:46] -rw------- 1 boinc boinc      4896 Nov 25 14:24 pilotlog.txt
[2025-11-25 14:24:46] -rw------- 1 boinc boinc   6042274 Nov 25 14:24 log.47556137._000612.job.log.1
[2025-11-25 14:24:46] -rw------- 1 boinc boinc       353 Nov 25 14:24 output.list
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc       620 Nov 25 14:24 runtime_log
[2025-11-25 14:24:46] -rw------- 1 boinc boinc   8458240 Nov 25 14:24 result.tar.gz
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc      8842 Nov 25 14:24 runtime_log.err
[2025-11-25 14:24:46] -rw------- 1 boinc boinc       665 Nov 25 14:24 aj6LDmW3ig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0XJKDmXlyn1n.diag
[2025-11-25 14:24:46] -rw-r--r-- 1 boinc boinc     21348 Nov 25 14:24 stderr.txt
[2025-11-25 14:24:46] HITS file was successfully produced:
[2025-11-25 14:24:46] -rw------- 1 boinc boinc 907684489 Nov 25 14:23 shared/HITS.pool.root.1
[2025-11-25 14:24:46]  *** Contents of shared directory: ***
[2025-11-25 14:24:46] total 1296800
[2025-11-25 14:24:46] -rw-r--r-- 2 boinc boinc 411165397 Nov 25 02:33 ATLAS.root_0
[2025-11-25 14:24:46] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:33 start_atlas.sh
[2025-11-25 14:24:46] -rw-r--r-- 2 boinc boinc    590096 Nov 25 02:33 input.tar.gz
[2025-11-25 14:24:46] -rw------- 1 boinc boinc 907684489 Nov 25 14:23 HITS.pool.root.1
[2025-11-25 14:24:46] -rw------- 1 boinc boinc   8458240 Nov 25 14:24 result.tar.gz
14:24:48 (1726590): run_atlas exited; CPU time 498445.180653
14:24:48 (1726590): called boinc_finish(0)

</stderr_txt>
]]>

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