Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:48:39 (1480565): wrapper (7.7.26015): starting
14:48:39 (1480565): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 14:48:39] Arguments: --nthreads 12
[2025-11-24 14:48:39] Threads: 12
[2025-11-24 14:48:39] Checking for CVMFS
[2025-11-24 14:48:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 14:48:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 14:48:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 14:48:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 14:48:39] 2.13.3.0 11850 4257 79496 153247 3 90 3495223 4097024 1043 130560 0 3398940 99.990 145094 22195 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-24 14:48:39] CVMFS is ok
[2025-11-24 14:48:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 14:48:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 14:48:39] Further information can be found at the LHC@home message board.
[2025-11-24 14:48:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 14:48:39] Checking for apptainer binary...
[2025-11-24 14:48:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 14:48:39] Running /usr/bin/apptainer --version
[2025-11-24 14:48:39] apptainer version 1.4.4-1.el9
[2025-11-24 14:48:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 14:48:40] pckelar1.cern.ch
[2025-11-24 14:48:40] apptainer works
[2025-11-24 14:48:40] Set ATHENA_PROC_NUMBER=12
[2025-11-24 14:48:40] Set ATHENA_CORE_NUMBER=12
[2025-11-24 14:48:40] Starting ATLAS job with PandaID=6895328015
[2025-11-24 14:48:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:33:13]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:33:13] 2025-11-25 01:32:39,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:33:13] 2025-11-25 01:32:39,624 | INFO     | time since job start (42228s) is within the limit (172800.0s)
[2025-11-25 02:33:13] 2025-11-25 01:32:41,063 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 02:33:13] 2025-11-25 01:32:41,066 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2824.974083333333
[2025-11-25 02:33:13] 2025-11-25 01:32:41,069 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6895328015/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 02:33:13] 2025-11-25 01:32:41,070 | INFO     | extracted standard info from prmon json
[2025-11-25 02:33:13] 2025-11-25 01:32:41,070 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 02:33:13] 2025-11-25 01:32:41,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:33:13] 2025-11-25 01:32:41,079 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:33:13] 2025-11-25 01:32:41,080 | INFO     | sum of square deviations: 102753015272.75578
[2025-11-25 02:33:13] 2025-11-25 01:32:41,089 | INFO     | sum of deviations: 1736344972239.8
[2025-11-25 02:33:13] 2025-11-25 01:32:41,089 | INFO     | mean x: 1764013236.4812138
[2025-11-25 02:33:13] 2025-11-25 01:32:41,089 | INFO     | mean y: 3591219.907514451
[2025-11-25 02:33:13] 2025-11-25 01:32:41,089 | INFO     | intersect: -29805125400.214176
[2025-11-25 02:33:13] 2025-11-25 01:32:41,090 | INFO     | chi2: 5.538320973972024
[2025-11-25 02:33:13] 2025-11-25 01:32:41,090 | INFO     | sum of square deviations: 100541962297.90706
[2025-11-25 02:33:13] 2025-11-25 01:32:41,099 | INFO     | sum of deviations: 1993476449691.473
[2025-11-25 02:33:13] 2025-11-25 01:32:41,099 | INFO     | mean x: 1764013083.9883552
[2025-11-25 02:33:13] 2025-11-25 01:32:41,099 | INFO     | mean y: 3608939.809315866
[2025-11-25 02:33:13] 2025-11-25 01:32:41,099 | INFO     | intersect: -34972021727.30383
[2025-11-25 02:33:13] 2025-11-25 01:32:41,100 | INFO     | chi2: 2.8307662412591466
[2025-11-25 02:33:13] 2025-11-25 01:32:41,100 | INFO     | current chi2=2.8307662412591466 (change=48.887645649960376 %)
[2025-11-25 02:33:13] 2025-11-25 01:32:41,101 | INFO     | sum of square deviations: 98362863410.48662
[2025-11-25 02:33:13] 2025-11-25 01:32:41,109 | INFO     | sum of deviations: 2057414031992.6235
[2025-11-25 02:33:13] 2025-11-25 01:32:41,110 | INFO     | mean x: 1764012931.4956012
[2025-11-25 02:33:13] 2025-11-25 01:32:41,110 | INFO     | mean y: 3613398.2082111435
[2025-11-25 02:33:13] 2025-11-25 01:32:41,110 | INFO     | intersect: -36893492196.71255
[2025-11-25 02:33:13] 2025-11-25 01:32:41,110 | INFO     | chi2: 2.4083153003469655
[2025-11-25 02:33:13] 2025-11-25 01:32:41,110 | INFO     | current chi2=2.4083153003469655 (change=14.923554433949715 %)
[2025-11-25 02:33:13] 2025-11-25 01:32:41,111 | INFO     | right removable region: 681
[2025-11-25 02:33:13] 2025-11-25 01:32:41,111 | INFO     | sum of square deviations: 100541632167.85495
[2025-11-25 02:33:13] 2025-11-25 01:32:41,120 | INFO     | sum of deviations: 1506922813558.7173
[2025-11-25 02:33:13] 2025-11-25 01:32:41,120 | INFO     | mean x: 1764013388.985444
[2025-11-25 02:33:13] 2025-11-25 01:32:41,120 | INFO     | mean y: 3607010.4716157205
[2025-11-25 02:33:13] 2025-11-25 01:32:41,120 | INFO     | intersect: -26435510417.493515
[2025-11-25 02:33:13] 2025-11-25 01:32:41,121 | INFO     | chi2: 3.4324443353005614
[2025-11-25 02:33:13] 2025-11-25 01:32:41,121 | INFO     | current chi2=3.4324443353005614 (change=38.02373767371504 %)
[2025-11-25 02:33:13] 2025-11-25 01:32:41,121 | INFO     | sum of square deviations: 98362329240.35371
[2025-11-25 02:33:13] 2025-11-25 01:32:41,130 | INFO     | sum of deviations: 1423537911912.5142
[2025-11-25 02:33:13] 2025-11-25 01:32:41,130 | INFO     | mean x: 1764013541.4853373
[2025-11-25 02:33:13] 2025-11-25 01:32:41,130 | INFO     | mean y: 3612843.551319648
[2025-11-25 02:33:13] 2025-11-25 01:32:41,130 | INFO     | intersect: -25525877692.35627
[2025-11-25 02:33:13] 2025-11-25 01:32:41,131 | INFO     | chi2: 3.335990978311487
[2025-11-25 02:33:13] 2025-11-25 01:32:41,131 | INFO     | current chi2=3.335990978311487 (change=2.810048687377425 %)
[2025-11-25 02:33:13] 2025-11-25 01:32:41,131 | INFO     | left removable region: 20
[2025-11-25 02:33:13] 2025-11-25 01:32:41,132 | INFO     | sum of square deviations: 89553344210.0
[2025-11-25 02:33:13] 2025-11-25 01:32:41,140 | INFO     | sum of deviations: 1626039531055.0
[2025-11-25 02:33:13] 2025-11-25 01:32:41,140 | INFO     | mean x: 1764013511.0
[2025-11-25 02:33:13] 2025-11-25 01:32:41,140 | INFO     | mean y: 3643603.4417549167
[2025-11-25 02:33:13] 2025-11-25 01:32:41,140 | INFO     | intersect: -32025933041.67954
[2025-11-25 02:33:13] 2025-11-25 01:32:41,140 | INFO     | chi2: 0.15793926646414583
[2025-11-25 02:33:13] 2025-11-25 01:32:41,141 | INFO     | current memory leak: 18.16 B/s (using 661 data points, chi2=0.16)
[2025-11-25 02:33:13] 2025-11-25 01:32:41,141 | INFO     | could have reported an average CPU frequency of 2802 MHz (27 samples)
[2025-11-25 02:33:13] 2025-11-25 01:32:41,141 | INFO     | ..............................
[2025-11-25 02:33:13] 2025-11-25 01:32:41,141 | INFO     | . Timing measurements:
[2025-11-25 02:33:13] 2025-11-25 01:32:41,142 | INFO     | . get job = 0 s
[2025-11-25 02:33:13] 2025-11-25 01:32:41,142 | INFO     | . initial setup = 2 s
[2025-11-25 02:33:13] 2025-11-25 01:32:41,142 | INFO     | . payload setup = 8 s
[2025-11-25 02:33:13] 2025-11-25 01:32:41,142 | INFO     | . stage-in = 0 s
[2025-11-25 02:33:13] 2025-11-25 01:32:41,142 | INFO     | . payload execution = 42193 s
[2025-11-25 02:33:13] 2025-11-25 01:32:41,142 | INFO     | . stage-out = 2 s
[2025-11-25 02:33:13] 2025-11-25 01:32:41,142 | INFO     | . log creation = 0 s
[2025-11-25 02:33:13] 2025-11-25 01:32:41,142 | INFO     | ..............................
[2025-11-25 02:33:13] 2025-11-25 01:32:41,211 | INFO     | 
[2025-11-25 02:33:13] 2025-11-25 01:32:41,211 | INFO     | job summary report
[2025-11-25 02:33:13] 2025-11-25 01:32:41,211 | INFO     | --------------------------------------------------
[2025-11-25 02:33:13] 2025-11-25 01:32:41,211 | INFO     | PanDA job id: 6895328015
[2025-11-25 02:33:13] 2025-11-25 01:32:41,211 | INFO     | task id: 47556149
[2025-11-25 02:33:13] 2025-11-25 01:32:41,212 | INFO     | errors: (none)
[2025-11-25 02:33:13] 2025-11-25 01:32:41,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:33:13] 2025-11-25 01:32:41,212 | INFO     | pilot state: finished 
[2025-11-25 02:33:13] 2025-11-25 01:32:41,212 | INFO     | transexitcode: 0
[2025-11-25 02:33:13] 2025-11-25 01:32:41,212 | INFO     | exeerrorcode: 0
[2025-11-25 02:33:13] 2025-11-25 01:32:41,212 | INFO     | exeerrordiag: 
[2025-11-25 02:33:13] 2025-11-25 01:32:41,212 | INFO     | exitcode: 0
[2025-11-25 02:33:13] 2025-11-25 01:32:41,212 | INFO     | exitmsg: OK
[2025-11-25 02:33:13] 2025-11-25 01:32:41,213 | INFO     | cpuconsumptiontime: 492370 s
[2025-11-25 02:33:13] 2025-11-25 01:32:41,213 | INFO     | nevents: 1000
[2025-11-25 02:33:13] 2025-11-25 01:32:41,213 | INFO     | neventsw: 0
[2025-11-25 02:33:13] 2025-11-25 01:32:41,213 | INFO     | pid: 1491887
[2025-11-25 02:33:13] 2025-11-25 01:32:41,213 | INFO     | pgrp: 1491887
[2025-11-25 02:33:13] 2025-11-25 01:32:41,213 | INFO     | corecount: 12
[2025-11-25 02:33:13] 2025-11-25 01:32:41,213 | INFO     | event service: False
[2025-11-25 02:33:13] 2025-11-25 01:32:41,214 | INFO     | sizes: {0: 2284137, 1: 2284336, 6: 2284598, 12: 2284626, 42204: 2328880, 42205: 2328879, 42207: 2338057, 42208: 2338113, 42214: 2338359}
[2025-11-25 02:33:13] 2025-11-25 01:32:41,214 | INFO     | --------------------------------------------------
[2025-11-25 02:33:13] 2025-11-25 01:32:41,214 | INFO     | 
[2025-11-25 02:33:13] 2025-11-25 01:32:41,214 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-25 02:33:13] 2025-11-25 01:32:41,233 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,233 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,233 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,233 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,236 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:33:13] 2025-11-25 01:32:41,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,236 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:33:13] 2025-11-25 01:32:41,236 | INFO     | job 6895328015 has completed (purged errors)
[2025-11-25 02:33:13] 2025-11-25 01:32:41,237 | INFO     | overall cleanup function is called
[2025-11-25 02:33:13] 2025-11-25 01:32:42,256 | INFO     | --- collectZombieJob: --- 10, [1491887]
[2025-11-25 02:33:13] 2025-11-25 01:32:42,257 | INFO     | zombie collector waiting for pid 1491887
[2025-11-25 02:33:13] 2025-11-25 01:32:42,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:33:13] 2025-11-25 01:32:42,257 | INFO     | collected zombie processes
[2025-11-25 02:33:13] 2025-11-25 01:32:42,257 | INFO     | will attempt to kill all subprocesses of pid=1491887
[2025-11-25 02:33:13] 2025-11-25 01:32:42,453 | INFO     | process IDs to be killed: [1491887] (in reverse order)
[2025-11-25 02:33:13] 2025-11-25 01:32:42,513 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:33:13] 2025-11-25 01:32:42,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:33:13] 2025-11-25 01:32:42,522 | INFO     | did not find any defunct processes belonging to 1491887
[2025-11-25 02:33:13] 2025-11-25 01:32:42,529 | INFO     | did not find any defunct processes belonging to 1491887
[2025-11-25 02:33:13] 2025-11-25 01:32:42,531 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:33:13] 2025-11-25 01:32:42,531 | INFO     | ready for new job
[2025-11-25 02:33:13] 2025-11-25 01:32:42,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:33:13] 2025-11-25 01:32:42,535 | INFO     | ***************************************
[2025-11-25 02:33:13] 2025-11-25 01:32:42,535 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:33:13] 2025-11-25 01:32:42,535 | INFO     | ***************************************
[2025-11-25 02:33:13] 2025-11-25 01:32:42,536 | INFO     | 
[2025-11-25 02:33:13] 2025-11-25 01:32:42,537 | INFO     | architecture information:
[2025-11-25 02:33:13] 2025-11-25 01:32:42,538 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:33:13] 2025-11-25 01:32:42,552 | INFO     | cat /etc/os-release:
[2025-11-25 02:33:13] NAME="CentOS Linux"
[2025-11-25 02:33:13] VERSION="7 (Core)"
[2025-11-25 02:33:13] ID="centos"
[2025-11-25 02:33:13] ID_LIKE="rhel fedora"
[2025-11-25 02:33:13] VERSION_ID="7"
[2025-11-25 02:33:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:33:13] ANSI_COLOR="0;31"
[2025-11-25 02:33:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:33:13] HOME_URL="https://www.centos.org/"
[2025-11-25 02:33:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:33:13] 
[2025-11-25 02:33:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:33:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:33:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:33:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:33:13] 
[2025-11-25 02:33:13] 2025-11-25 01:32:42,553 | INFO     | ***************************************
[2025-11-25 02:33:13] 2025-11-25 01:32:43,056 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-25 02:33:13] 2025-11-25 01:32:43,072 | INFO     | sufficient remaining disk space (777355526144 B)
[2025-11-25 02:33:13] 2025-11-25 01:32:43,072 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:33:13] 2025-11-25 01:32:43,073 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:33:13] 2025-11-25 01:32:43,073 | INFO     | update_server=False
[2025-11-25 02:33:13] 2025-11-25 01:32:43,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:33:13] 2025-11-25 01:32:43,074 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:33:13] 2025-11-25 01:32:43,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:33:13] 2025-11-25 01:32:43,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:33:13] 2025-11-25 01:32:43,074 | INFO     | aborting loop
[2025-11-25 02:33:13] 2025-11-25 01:32:43,499 | INFO     | all data control threads have been joined
[2025-11-25 02:33:13] 2025-11-25 01:32:43,721 | INFO     | all payload control threads have been joined
[2025-11-25 02:33:13] 2025-11-25 01:32:44,075 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:44,078 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:44,079 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:44,121 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:44,245 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:44,298 | INFO     | all job control threads have been joined
[2025-11-25 02:33:13] 2025-11-25 01:32:44,352 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:44,489 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:44,505 | INFO     | [data] control thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:44,628 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:44,725 | INFO     | [payload] control thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:44,894 | INFO     | [job] validate thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:45,080 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:45,195 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:45,304 | INFO     | [job] control thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:45,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:33:13] 2025-11-25 01:32:49,395 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:32:54,080 | INFO     | job.realtimelogging is not enabled
[2025-11-25 02:33:13] 2025-11-25 01:32:55,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:33:13] 2025-11-25 01:33:00,439 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:33:13] 2025-11-25 01:33:02,053 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850143450944)>', '<ExcThread(monitor, started 139849428363008)>']
[2025-11-25 02:33:13] 2025-11-25 01:33:07,078 | INFO     | all workflow threads have been joined
[2025-11-25 02:33:13] 2025-11-25 01:33:07,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:33:13] 2025-11-25 01:33:07,079 | INFO     | traces error code: 0
[2025-11-25 02:33:13] 2025-11-25 01:33:07,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:33:13] 2025-11-25 01:33:12,950 | INFO     | PID=1484408 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 02:33:13] 2025-11-25 01:33:12,951 | INFO     | .. there are 2 such processes running
[2025-11-25 02:33:13] 2025-11-25 01:33:12,952 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:33:13] 2025-11-25 01:33:12,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:33:13] 2025-11-25 01:33:12,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:33:13] 2025-11-25 01:33:12,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:33:13] 2025-11-25 01:33:12,953 | INFO     | [monitor] control thread has ended
[2025-11-25 02:33:13] 2025-11-25 01:33:13,073 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:33:13] 2025-11-25 01:33:13,075 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:33:13] 2025-11-25 01:33:13,078 [wrapper] pilotpid: 1484408
[2025-11-25 02:33:13] 2025-11-25 01:33:13,080 [wrapper] Pilot exit status: 0
[2025-11-25 02:33:13] 2025-11-25 01:33:13,090 [wrapper] pandaids: 6895328015
[2025-11-25 02:33:13] 2025-11-25 01:33:13,128 [wrapper] cleanup supervisor_pilot 1698376 1484409
[2025-11-25 02:33:13] 2025-11-25 01:33:13,131 [wrapper] Test setup, not cleaning
[2025-11-25 02:33:13] 2025-11-25 01:33:13,134 [wrapper] apfmon messages muted
[2025-11-25 02:33:13] 2025-11-25 01:33:13,137 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:33:13] 2025-11-25 01:33:13,140 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:33:13]  *** Error codes and diagnostics ***
[2025-11-25 02:33:13]     "exeErrorCode": 0,
[2025-11-25 02:33:13]     "exeErrorDiag": "",
[2025-11-25 02:33:13]     "pilotErrorCode": 0,
[2025-11-25 02:33:13]     "pilotErrorDiag": "",
[2025-11-25 02:33:13]  *** Listing of results directory ***
[2025-11-25 02:33:13] total 1315260
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc    576529 Nov 21 16:53 pilot3.tar.gz
[2025-11-25 02:33:13] -rwx------ 1 boinc boinc     36292 Nov 21 17:11 runpilot2-wrapper.sh
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc      5112 Nov 21 17:11 queuedata.json
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc       100 Nov 24 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:33:13] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 14:48 run_atlas
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc       105 Nov 24 14:48 job.xml
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc      6295 Nov 24 14:48 init_data.xml
[2025-11-25 02:33:13] -rw-r--r-- 2 boinc boinc 412005441 Nov 24 14:48 EVNT.47483658._001025.pool.root.1
[2025-11-25 02:33:13] -rw-r--r-- 2 boinc boinc     15847 Nov 24 14:48 start_atlas.sh
[2025-11-25 02:33:13] drwxrwx--x 2 boinc boinc        68 Nov 24 14:48 shared
[2025-11-25 02:33:13] -rw-r--r-- 2 boinc boinc    590102 Nov 24 14:48 input.tar.gz
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc         0 Nov 24 14:48 boinc_lockfile
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc      2785 Nov 24 14:48 pandaJob.out
[2025-11-25 02:33:13] -rw------- 1 boinc boinc    988280 Nov 24 14:48 agis_schedconf.cvmfs.json
[2025-11-25 02:33:13] drwx------ 5 boinc boinc      4096 Nov 24 14:48 pilot3
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc       533 Nov 25 02:23 boinc_task_state.xml
[2025-11-25 02:33:13] -rw------- 1 boinc boinc 914188281 Nov 25 02:31 HITS.47556149._000116.pool.root.1
[2025-11-25 02:33:13] -rw------- 1 boinc boinc      1037 Nov 25 02:32 memory_monitor_summary.json
[2025-11-25 02:33:13] -rw------- 1 boinc boinc   1516227 Nov 25 02:32 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:33:13] -rw------- 1 boinc boinc   2388753 Nov 25 02:32 log.47556149._000116.job.log.tgz.1
[2025-11-25 02:33:13] -rw------- 1 boinc boinc      8611 Nov 25 02:32 heartbeat.json
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc      8192 Nov 25 02:32 boinc_mmap_file
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc        29 Nov 25 02:32 wrapper_checkpoint.txt
[2025-11-25 02:33:13] -rw------- 1 boinc boinc        95 Nov 25 02:33 pilot_heartbeat.json
[2025-11-25 02:33:13] -rw------- 1 boinc boinc       822 Nov 25 02:33 pilotlog.txt
[2025-11-25 02:33:13] -rw------- 1 boinc boinc   5979001 Nov 25 02:33 log.47556149._000116.job.log.1
[2025-11-25 02:33:13] -rw------- 1 boinc boinc       353 Nov 25 02:33 output.list
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc       620 Nov 25 02:33 runtime_log
[2025-11-25 02:33:13] -rw------- 1 boinc boinc   8386560 Nov 25 02:33 result.tar.gz
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc      8842 Nov 25 02:33 runtime_log.err
[2025-11-25 02:33:13] -rw------- 1 boinc boinc       665 Nov 25 02:33 n97MDmRuig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTXJKDmXd8Yyn.diag
[2025-11-25 02:33:13] -rw-r--r-- 1 boinc boinc     21302 Nov 25 02:33 stderr.txt
[2025-11-25 02:33:13] HITS file was successfully produced:
[2025-11-25 02:33:13] -rw------- 1 boinc boinc 914188281 Nov 25 02:31 shared/HITS.pool.root.1
[2025-11-25 02:33:13]  *** Contents of shared directory: ***
[2025-11-25 02:33:13] total 1303904
[2025-11-25 02:33:13] -rw-r--r-- 2 boinc boinc 412005441 Nov 24 14:48 ATLAS.root_0
[2025-11-25 02:33:13] -rw-r--r-- 2 boinc boinc     15847 Nov 24 14:48 start_atlas.sh
[2025-11-25 02:33:13] -rw-r--r-- 2 boinc boinc    590102 Nov 24 14:48 input.tar.gz
[2025-11-25 02:33:13] -rw------- 1 boinc boinc 914188281 Nov 25 02:31 HITS.pool.root.1
[2025-11-25 02:33:13] -rw------- 1 boinc boinc   8386560 Nov 25 02:33 result.tar.gz
02:33:14 (1480565): run_atlas exited; CPU time 492606.548191
02:33:14 (1480565): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN