Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:29:37 (1297137): wrapper (7.7.26015): starting
18:29:37 (1297137): wrapper: running run_atlas (--nthreads 3)
[2025-11-22 18:29:37] Arguments: --nthreads 3
[2025-11-22 18:29:37] Threads: 3
[2025-11-22 18:29:37] Checking for CVMFS
[2025-11-22 18:29:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 18:29:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 18:29:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 18:29:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 18:29:37] 2.9.2.0 1027257 298 65784 153180 2 128 34718897 36864000 0 130560 0 788960 99.997 13175 13810 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-22 18:29:37] CVMFS is ok
[2025-11-22 18:29:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 18:29:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 18:29:37] Further information can be found at the LHC@home message board.
[2025-11-22 18:29:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 18:29:37] Checking for apptainer binary...
[2025-11-22 18:29:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 18:29:37] Running /usr/bin/apptainer --version
[2025-11-22 18:29:37] apptainer version 1.4.1-1.1
[2025-11-22 18:29:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 18:29:37] thA335
[2025-11-22 18:29:37] apptainer works
[2025-11-22 18:29:37] Set ATHENA_PROC_NUMBER=3
[2025-11-22 18:29:37] Set ATHENA_CORE_NUMBER=3
[2025-11-22 18:29:38] Starting ATLAS job with PandaID=6895327965
[2025-11-22 18:29:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 18:33:56]  *** The last 200 lines of the pilot log: ***
[2025-11-22 18:33:56] 2025-11-22 17:33:04,162 | INFO     | ***************************************
[2025-11-22 18:33:56] 2025-11-22 17:33:04,666 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-22 18:33:56] 2025-11-22 17:33:04,679 | INFO     | sufficient remaining disk space (826619723776 B)
[2025-11-22 18:33:56] 2025-11-22 17:33:04,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 18:33:56] 2025-11-22 17:33:04,680 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 18:33:56] 2025-11-22 17:33:04,680 | INFO     | update_server=False
[2025-11-22 18:33:56] 2025-11-22 17:33:04,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 18:33:56] 2025-11-22 17:33:04,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:33:56] 2025-11-22 17:33:04,680 | INFO     | aborting loop
[2025-11-22 18:33:56] 2025-11-22 17:33:04,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:33:56] 2025-11-22 17:33:04,834 | INFO     | all job control threads have been joined
[2025-11-22 18:33:56] 2025-11-22 17:33:04,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 18:33:56] 2025-11-22 17:33:05,685 | INFO     | [job] job monitor thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:05,686 | INFO     | [job] retrieve thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:05,686 | INFO     | [job] queue monitor thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:05,719 | INFO     | all data control threads have been joined
[2025-11-22 18:33:56] 2025-11-22 17:33:05,839 | INFO     | [job] control thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:05,868 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:06,003 | INFO     | all payload control threads have been joined
[2025-11-22 18:33:56] 2025-11-22 17:33:06,034 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:06,506 | INFO     | [payload] failed_post thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:06,628 | INFO     | [payload] validate_post thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:06,669 | INFO     | [data] copytool_in thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:06,725 | INFO     | [data] control thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:06,937 | INFO     | [data] copytool_out thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:06,983 | INFO     | [job] validate thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:07,009 | INFO     | [payload] control thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:07,069 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:07,117 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:07,679 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 18:33:56] 2025-11-22 17:33:11,686 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 18:33:56] 2025-11-22 17:33:35,088 | INFO     | PID=1300873 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 18:33:56] 2025-11-22 17:33:35,088 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 18:33:56] 2025-11-22 17:33:35,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 18:33:56] 2025-11-22 17:33:35,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 18:33:56] 2025-11-22 17:33:50,288 | INFO     | [monitor] cgroup control has ended
[2025-11-22 18:33:56] 2025-11-22 17:33:51,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163288500032)>', '<ExcThread(monitor, started 140162491213568)>']
[2025-11-22 18:33:56] 2025-11-22 17:33:52,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 18:33:56] 2025-11-22 17:33:52,179 | INFO     | [monitor] control thread has ended
[2025-11-22 18:33:56] 2025-11-22 17:33:56,465 | INFO     | all workflow threads have been joined
[2025-11-22 18:33:56] 2025-11-22 17:33:56,465 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 18:33:56] 2025-11-22 17:33:56,466 | INFO     | traces error code: 0
[2025-11-22 18:33:56] 2025-11-22 17:33:56,466 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 18:33:56] 2025-11-22 17:33:56,511 [wrapper] ==== pilot stdout END ====
[2025-11-22 18:33:56] 2025-11-22 17:33:56,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 18:33:56] 2025-11-22 17:33:56,517 [wrapper] pilotpid: 1300873
[2025-11-22 18:33:56] 2025-11-22 17:33:56,520 [wrapper] Pilot exit status: 0
[2025-11-22 18:33:56] 2025-11-22 17:33:56,527 [wrapper] pandaids: 6895327965
[2025-11-22 18:33:56] 2025-11-22 17:33:56,544 [wrapper] cleanup supervisor_pilot 1300879 1300874
[2025-11-22 18:33:56] 2025-11-22 17:33:56,547 [wrapper] Test setup, not cleaning
[2025-11-22 18:33:56] 2025-11-22 17:33:56,550 [wrapper] apfmon messages muted
[2025-11-22 18:33:56] 2025-11-22 17:33:56,552 [wrapper] ==== wrapper stdout END ====
[2025-11-22 18:33:56] 2025-11-22 17:33:56,555 [wrapper] ==== wrapper stderr END ====
[2025-11-22 18:33:56]  *** Error codes and diagnostics ***
[2025-11-22 18:33:56]     "exeErrorCode": 65,
[2025-11-22 18:33:56]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-22 18:33:56]     "pilotErrorCode": 1305,
[2025-11-22 18:33:56]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-22 18:33:56]  *** Listing of results directory ***
[2025-11-22 18:33:56] total 403508
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc    576529 Nov 21 16:53 pilot3.tar.gz
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc      5112 Nov 21 17:05 queuedata.json
[2025-11-22 18:33:56] -rwx------ 1 boinc boinc     36292 Nov 21 17:05 runpilot2-wrapper.sh
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc       100 Nov 22 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 18:33:56] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 18:29 run_atlas
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc       105 Nov 22 18:29 job.xml
[2025-11-22 18:33:56] -rw-r--r-- 2 boinc boinc 408982546 Nov 22 18:29 EVNT.47483658._000055.pool.root.1
[2025-11-22 18:33:56] -rw-r--r-- 2 boinc boinc    590096 Nov 22 18:29 input.tar.gz
[2025-11-22 18:33:56] -rw-r--r-- 2 boinc boinc     15847 Nov 22 18:29 start_atlas.sh
[2025-11-22 18:33:56] drwxrwx--x 2 boinc boinc      4096 Nov 22 18:29 shared
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc         0 Nov 22 18:29 boinc_setup_complete
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc      6194 Nov 22 18:29 init_data.xml
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc         0 Nov 22 18:29 boinc_lockfile
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc      2783 Nov 22 18:29 pandaJob.out
[2025-11-22 18:33:56] -rw------- 1 boinc boinc    989776 Nov 22 18:29 agis_schedconf.cvmfs.json
[2025-11-22 18:33:56] -rw------- 1 boinc boinc   1526164 Nov 22 18:29 agis_ddmendpoints.agis.ALL.json
[2025-11-22 18:33:56] drwx------ 5 boinc boinc      4096 Nov 22 18:29 pilot3
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc       522 Nov 22 18:30 boinc_task_state.xml
[2025-11-22 18:33:56] -rw------- 1 boinc boinc       953 Nov 22 18:30 memory_monitor_summary.json
[2025-11-22 18:33:56] -rw------- 1 boinc boinc     55880 Nov 22 18:30 log.47556137._000544.job.log.tgz.1
[2025-11-22 18:33:56] -rw------- 1 boinc boinc        95 Nov 22 18:32 pilot_heartbeat.json
[2025-11-22 18:33:56] -rw------- 1 boinc boinc      8413 Nov 22 18:33 heartbeat.json
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc      8192 Nov 22 18:33 boinc_mmap_file
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc        22 Nov 22 18:33 wrapper_checkpoint.txt
[2025-11-22 18:33:56] -rw------- 1 boinc boinc      4752 Nov 22 18:33 pilotlog.txt
[2025-11-22 18:33:56] -rw------- 1 boinc boinc     93441 Nov 22 18:33 log.47556137._000544.job.log.1
[2025-11-22 18:33:56] -rw------- 1 boinc boinc       186 Nov 22 18:33 output.list
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc       620 Nov 22 18:33 runtime_log
[2025-11-22 18:33:56] -rw------- 1 boinc boinc    174080 Nov 22 18:33 result.tar.gz
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc      8744 Nov 22 18:33 runtime_log.err
[2025-11-22 18:33:56] -rw------- 1 boinc boinc       649 Nov 22 18:33 U7SKDm0oig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGXJKDmBZVfFm.diag
[2025-11-22 18:33:56] -rw-r--r-- 1 boinc boinc      8337 Nov 22 18:33 stderr.txt
[2025-11-22 18:33:56] No HITS result produced
[2025-11-22 18:33:56]  *** Contents of shared directory: ***
[2025-11-22 18:33:56] total 400172
[2025-11-22 18:33:56] -rw-r--r-- 2 boinc boinc 408982546 Nov 22 18:29 ATLAS.root_0
[2025-11-22 18:33:56] -rw-r--r-- 2 boinc boinc    590096 Nov 22 18:29 input.tar.gz
[2025-11-22 18:33:56] -rw-r--r-- 2 boinc boinc     15847 Nov 22 18:29 start_atlas.sh
[2025-11-22 18:33:56] -rw------- 1 boinc boinc    174080 Nov 22 18:33 result.tar.gz
18:33:58 (1297137): run_atlas exited; CPU time 31.628606
18:33:58 (1297137): called boinc_finish(0)

</stderr_txt>
]]>

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