Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:07:40 (2146196): wrapper (7.7.26015): starting
13:07:40 (2146196): wrapper: running run_atlas (--nthreads 9)
[2025-11-22 13:07:40] Arguments: --nthreads 9
[2025-11-22 13:07:40] Threads: 9
[2025-11-22 13:07:40] Checking for CVMFS
[2025-11-22 13:07:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 13:07:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 13:07:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 13:07:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 13:07:40] 2.13.3.0 3025293 3532 89212 153180 3 97 10945488 37030912 1932 16776704 0 3975929 99.861 588350 15307 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 13:07:40] CVMFS is ok
[2025-11-22 13:07:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 13:07:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 13:07:40] Further information can be found at the LHC@home message board.
[2025-11-22 13:07:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 13:07:40] Checking for apptainer binary...
[2025-11-22 13:07:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 13:07:40] Running /usr/bin/apptainer --version
[2025-11-22 13:07:40] apptainer version 1.4.4-1.el9
[2025-11-22 13:07:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 13:07:40] c-205-37.aglt2.org
[2025-11-22 13:07:40] apptainer works
[2025-11-22 13:07:41] Set ATHENA_PROC_NUMBER=9
[2025-11-22 13:07:41] Set ATHENA_CORE_NUMBER=9
[2025-11-22 13:07:41] Starting ATLAS job with PandaID=6895328056
[2025-11-22 13:07:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 21:49:46]  *** The last 200 lines of the pilot log: ***
[2025-11-22 21:49:46] 2025-11-23 02:49:07,068 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 21:49:46] 2025-11-23 02:49:07,075 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2675.3629374999996
[2025-11-22 21:49:46] 2025-11-23 02:49:07,081 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895328056/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 21:49:46] 2025-11-23 02:49:07,082 | INFO     | extracted standard info from prmon json
[2025-11-22 21:49:46] 2025-11-23 02:49:07,082 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 21:49:46] 2025-11-23 02:49:07,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 21:49:46] 2025-11-23 02:49:07,092 | INFO     | fitting pss+swap vs Time
[2025-11-22 21:49:46] 2025-11-23 02:49:07,093 | INFO     | sum of square deviations: 41862857472.0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,100 | INFO     | sum of deviations: 573389829409.0001
[2025-11-22 21:49:46] 2025-11-23 02:49:07,100 | INFO     | mean x: 1763850511.0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,100 | INFO     | mean y: 3095883.7076023393
[2025-11-22 21:49:46] 2025-11-23 02:49:07,100 | INFO     | intersect: -24156123163.432835
[2025-11-22 21:49:46] 2025-11-23 02:49:07,101 | INFO     | chi2: 5.220295904999977
[2025-11-22 21:49:46] 2025-11-23 02:49:07,102 | INFO     | sum of square deviations: 40650685907.0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,109 | INFO     | sum of deviations: 750601401457.4999
[2025-11-22 21:49:46] 2025-11-23 02:49:07,109 | INFO     | mean x: 1763850358.5
[2025-11-22 21:49:46] 2025-11-23 02:49:07,109 | INFO     | mean y: 3118160.994094488
[2025-11-22 21:49:46] 2025-11-23 02:49:07,110 | INFO     | intersect: -32565792338.580803
[2025-11-22 21:49:46] 2025-11-23 02:49:07,110 | INFO     | chi2: 2.2292713110639073
[2025-11-22 21:49:46] 2025-11-23 02:49:07,111 | INFO     | monitor loop #2324: job 0:6895328056 is in state 'finished'
[2025-11-22 21:49:46] 2025-11-23 02:49:07,111 | INFO     | current chi2=2.2292713110639073 (change=57.29607379289131 %)
[2025-11-22 21:49:46] 2025-11-23 02:49:07,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:49:46] 2025-11-23 02:49:07,112 | INFO     | sum of square deviations: 39462142692.0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,118 | INFO     | sum of deviations: 769192271264.9996
[2025-11-22 21:49:46] 2025-11-23 02:49:07,119 | INFO     | mean x: 1763850206.0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,119 | INFO     | mean y: 3120520.97415507
[2025-11-22 21:49:46] 2025-11-23 02:49:07,119 | INFO     | intersect: -34377677215.065254
[2025-11-22 21:49:46] 2025-11-23 02:49:07,120 | INFO     | chi2: 2.0030129608166476
[2025-11-22 21:49:46] 2025-11-23 02:49:07,120 | INFO     | current chi2=2.0030129608166476 (change=10.149430853227065 %)
[2025-11-22 21:49:46] 2025-11-23 02:49:07,120 | INFO     | right removable region: 502
[2025-11-22 21:49:46] 2025-11-23 02:49:07,121 | INFO     | sum of square deviations: 40650685907.0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,127 | INFO     | sum of deviations: 444076659640.0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,128 | INFO     | mean x: 1763850663.5
[2025-11-22 21:49:46] 2025-11-23 02:49:07,128 | INFO     | mean y: 3112100.3385826773
[2025-11-22 21:49:46] 2025-11-23 02:49:07,128 | INFO     | intersect: -19265564264.504673
[2025-11-22 21:49:46] 2025-11-23 02:49:07,129 | INFO     | chi2: 3.4123886623321282
[2025-11-22 21:49:46] 2025-11-23 02:49:07,129 | INFO     | current chi2=3.4123886623321282 (change=34.63227517306525 %)
[2025-11-22 21:49:46] 2025-11-23 02:49:07,130 | INFO     | sum of square deviations: 39462142692.0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,137 | INFO     | sum of deviations: 405632102234.00006
[2025-11-22 21:49:46] 2025-11-23 02:49:07,137 | INFO     | mean x: 1763850816.0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,137 | INFO     | mean y: 3117032.9562624255
[2025-11-22 21:49:46] 2025-11-23 02:49:07,137 | INFO     | intersect: -18127538469.089798
[2025-11-22 21:49:46] 2025-11-23 02:49:07,138 | INFO     | chi2: 3.3619250862146624
[2025-11-22 21:49:46] 2025-11-23 02:49:07,138 | INFO     | current chi2=3.3619250862146624 (change=1.4788343624075215 %)
[2025-11-22 21:49:46] 2025-11-23 02:49:07,138 | INFO     | left removable region: 20
[2025-11-22 21:49:46] 2025-11-23 02:49:07,139 | INFO     | sum of square deviations: 34723034300.5
[2025-11-22 21:49:46] 2025-11-23 02:49:07,145 | INFO     | sum of deviations: 538346944933.0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,145 | INFO     | mean x: 1763850785.5
[2025-11-22 21:49:46] 2025-11-23 02:49:07,145 | INFO     | mean y: 3150542.730290456
[2025-11-22 21:49:46] 2025-11-23 02:49:07,146 | INFO     | intersect: -27343643907.140812
[2025-11-22 21:49:46] 2025-11-23 02:49:07,146 | INFO     | chi2: 0.08973140251144286
[2025-11-22 21:49:46] 2025-11-23 02:49:07,147 | INFO     | current memory leak: 15.50 B/s (using 482 data points, chi2=0.09)
[2025-11-22 21:49:46] 2025-11-23 02:49:07,147 | INFO     | could have reported an average CPU frequency of 2622 MHz (21 samples)
[2025-11-22 21:49:46] 2025-11-23 02:49:07,148 | INFO     | ..............................
[2025-11-22 21:49:46] 2025-11-23 02:49:07,148 | INFO     | . Timing measurements:
[2025-11-22 21:49:46] 2025-11-23 02:49:07,148 | INFO     | . get job = 0 s
[2025-11-22 21:49:46] 2025-11-23 02:49:07,148 | INFO     | . initial setup = 2 s
[2025-11-22 21:49:46] 2025-11-23 02:49:07,148 | INFO     | . payload setup = 5 s
[2025-11-22 21:49:46] 2025-11-23 02:49:07,148 | INFO     | . stage-in = 0 s
[2025-11-22 21:49:46] 2025-11-23 02:49:07,148 | INFO     | . payload execution = 31240 s
[2025-11-22 21:49:46] 2025-11-23 02:49:07,148 | INFO     | . stage-out = 4 s
[2025-11-22 21:49:46] 2025-11-23 02:49:07,148 | INFO     | . log creation = 0 s
[2025-11-22 21:49:46] 2025-11-23 02:49:07,149 | INFO     | ..............................
[2025-11-22 21:49:46] 2025-11-23 02:49:07,254 | INFO     | 
[2025-11-22 21:49:46] 2025-11-23 02:49:07,254 | INFO     | job summary report
[2025-11-22 21:49:46] 2025-11-23 02:49:07,254 | INFO     | --------------------------------------------------
[2025-11-22 21:49:46] 2025-11-23 02:49:07,254 | INFO     | PanDA job id: 6895328056
[2025-11-22 21:49:46] 2025-11-23 02:49:07,254 | INFO     | task id: 47556149
[2025-11-22 21:49:46] 2025-11-23 02:49:07,255 | INFO     | errors: (none)
[2025-11-22 21:49:46] 2025-11-23 02:49:07,255 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 21:49:46] 2025-11-23 02:49:07,255 | INFO     | pilot state: finished 
[2025-11-22 21:49:46] 2025-11-23 02:49:07,255 | INFO     | transexitcode: 0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,255 | INFO     | exeerrorcode: 0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,255 | INFO     | exeerrordiag: 
[2025-11-22 21:49:46] 2025-11-23 02:49:07,255 | INFO     | exitcode: 0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,255 | INFO     | exitmsg: OK
[2025-11-22 21:49:46] 2025-11-23 02:49:07,255 | INFO     | cpuconsumptiontime: 276342 s
[2025-11-22 21:49:46] 2025-11-23 02:49:07,256 | INFO     | nevents: 1000
[2025-11-22 21:49:46] 2025-11-23 02:49:07,256 | INFO     | neventsw: 0
[2025-11-22 21:49:46] 2025-11-23 02:49:07,256 | INFO     | pid: 2156265
[2025-11-22 21:49:46] 2025-11-23 02:49:07,256 | INFO     | pgrp: 2156265
[2025-11-22 21:49:46] 2025-11-23 02:49:07,256 | INFO     | corecount: 9
[2025-11-22 21:49:46] 2025-11-23 02:49:07,256 | INFO     | event service: False
[2025-11-22 21:49:46] 2025-11-23 02:49:07,256 | INFO     | sizes: {0: 2298633, 1: 2298832, 5: 2299094, 12: 2299150, 31249: 2338484, 31250: 2338483, 31254: 2347661, 31257: 2347717, 31261: 2347963}
[2025-11-22 21:49:46] 2025-11-23 02:49:07,256 | INFO     | --------------------------------------------------
[2025-11-22 21:49:46] 2025-11-23 02:49:07,257 | INFO     | 
[2025-11-22 21:49:46] 2025-11-23 02:49:07,257 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 21:49:46] 2025-11-23 02:49:07,273 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,273 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,273 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,273 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,273 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,275 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,275 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,275 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,275 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 21:49:46] 2025-11-23 02:49:07,275 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,275 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 21:49:46] 2025-11-23 02:49:07,276 | INFO     | job 6895328056 has completed (purged errors)
[2025-11-22 21:49:46] 2025-11-23 02:49:07,276 | INFO     | overall cleanup function is called
[2025-11-22 21:49:46] 2025-11-23 02:49:08,293 | INFO     | --- collectZombieJob: --- 10, [2156265]
[2025-11-22 21:49:46] 2025-11-23 02:49:08,293 | INFO     | zombie collector waiting for pid 2156265
[2025-11-22 21:49:46] 2025-11-23 02:49:08,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 21:49:46] 2025-11-23 02:49:08,293 | INFO     | collected zombie processes
[2025-11-22 21:49:46] 2025-11-23 02:49:08,293 | INFO     | will attempt to kill all subprocesses of pid=2156265
[2025-11-22 21:49:46] 2025-11-23 02:49:08,496 | INFO     | process IDs to be killed: [2156265] (in reverse order)
[2025-11-22 21:49:46] 2025-11-23 02:49:08,552 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 21:49:46] 2025-11-23 02:49:08,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 21:49:46] 2025-11-23 02:49:08,557 | INFO     | did not find any defunct processes belonging to 2156265
[2025-11-22 21:49:46] 2025-11-23 02:49:08,562 | INFO     | did not find any defunct processes belonging to 2156265
[2025-11-22 21:49:46] 2025-11-23 02:49:08,563 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 21:49:46] 2025-11-23 02:49:08,563 | INFO     | ready for new job
[2025-11-22 21:49:46] 2025-11-23 02:49:08,564 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 21:49:46] 2025-11-23 02:49:08,566 | INFO     | ***************************************
[2025-11-22 21:49:46] 2025-11-23 02:49:08,567 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 21:49:46] 2025-11-23 02:49:08,567 | INFO     | ***************************************
[2025-11-22 21:49:46] 2025-11-23 02:49:08,567 | INFO     | 
[2025-11-22 21:49:46] 2025-11-23 02:49:08,569 | INFO     | architecture information:
[2025-11-22 21:49:46] 2025-11-23 02:49:08,569 | INFO     | executing command: cat /etc/os-release
[2025-11-22 21:49:46] 2025-11-23 02:49:08,582 | INFO     | cat /etc/os-release:
[2025-11-22 21:49:46] NAME="CentOS Linux"
[2025-11-22 21:49:46] VERSION="7 (Core)"
[2025-11-22 21:49:46] ID="centos"
[2025-11-22 21:49:46] ID_LIKE="rhel fedora"
[2025-11-22 21:49:46] VERSION_ID="7"
[2025-11-22 21:49:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 21:49:46] ANSI_COLOR="0;31"
[2025-11-22 21:49:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 21:49:46] HOME_URL="https://www.centos.org/"
[2025-11-22 21:49:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 21:49:46] 
[2025-11-22 21:49:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 21:49:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 21:49:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 21:49:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 21:49:46] 
[2025-11-22 21:49:46] 2025-11-23 02:49:08,582 | INFO     | ***************************************
[2025-11-22 21:49:46] 2025-11-23 02:49:09,084 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 21:49:46] 2025-11-23 02:49:09,097 | INFO     | sufficient remaining disk space (38847643648 B)
[2025-11-22 21:49:46] 2025-11-23 02:49:09,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 21:49:46] 2025-11-23 02:49:09,097 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 21:49:46] 2025-11-23 02:49:09,097 | INFO     | update_server=False
[2025-11-22 21:49:46] 2025-11-23 02:49:09,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 21:49:46] 2025-11-23 02:49:09,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:49:46] 2025-11-23 02:49:09,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:49:46] 2025-11-23 02:49:09,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 21:49:46] 2025-11-23 02:49:09,099 | INFO     | aborting loop
[2025-11-22 21:49:46] 2025-11-23 02:49:09,270 | INFO     | all job control threads have been joined
[2025-11-22 21:49:46] 2025-11-23 02:49:09,471 | INFO     | all data control threads have been joined
[2025-11-22 21:49:46] 2025-11-23 02:49:09,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 21:49:46] 2025-11-23 02:49:10,016 | INFO     | all payload control threads have been joined
[2025-11-22 21:49:46] 2025-11-23 02:49:10,103 | INFO     | [job] retrieve thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:10,104 | INFO     | [job] queue monitor thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:10,104 | INFO     | [job] job monitor thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:10,171 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:10,275 | INFO     | [job] control thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:10,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:10,476 | INFO     | [data] control thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:10,481 | INFO     | [payload] failed_post thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:10,495 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:10,636 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:11,021 | INFO     | [payload] control thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:11,104 | INFO     | [data] copytool_out thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:11,206 | INFO     | [payload] validate_post thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:11,590 | INFO     | [job] validate thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:11,601 | INFO     | [data] copytool_in thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:13,718 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 21:49:46] 2025-11-23 02:49:38,214 | INFO     | 31279s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-22 21:49:46] 2025-11-23 02:49:39,469 | INFO     | PID=2149887 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 21:49:46] 2025-11-23 02:49:39,470 | INFO     | .. there are 3 such processes running
[2025-11-22 21:49:46] 2025-11-23 02:49:39,470 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 21:49:46] 2025-11-23 02:49:39,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 21:49:46] 2025-11-23 02:49:39,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 21:49:46] 2025-11-23 02:49:39,553 | INFO     | [monitor] cgroup control has ended
[2025-11-22 21:49:46] 2025-11-23 02:49:41,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643493435200)>', '<ExcThread(monitor, started 140642713851648)>']
[2025-11-22 21:49:46] 2025-11-23 02:49:41,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 21:49:46] 2025-11-23 02:49:41,481 | INFO     | [monitor] control thread has ended
[2025-11-22 21:49:46] 2025-11-23 02:49:46,218 | INFO     | all workflow threads have been joined
[2025-11-22 21:49:46] 2025-11-23 02:49:46,218 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 21:49:46] 2025-11-23 02:49:46,219 | INFO     | traces error code: 0
[2025-11-22 21:49:46] 2025-11-23 02:49:46,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 21:49:46] 2025-11-23 02:49:46,319 [wrapper] ==== pilot stdout END ====
[2025-11-22 21:49:46] 2025-11-23 02:49:46,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 21:49:46] 2025-11-23 02:49:46,324 [wrapper] pilotpid: 2149887
[2025-11-22 21:49:46] 2025-11-23 02:49:46,326 [wrapper] Pilot exit status: 0
[2025-11-22 21:49:46] 2025-11-23 02:49:46,334 [wrapper] pandaids: 6895328056
[2025-11-22 21:49:46] 2025-11-23 02:49:46,369 [wrapper] cleanup supervisor_pilot 2599166 2149888
[2025-11-22 21:49:46] 2025-11-23 02:49:46,371 [wrapper] Test setup, not cleaning
[2025-11-22 21:49:46] 2025-11-23 02:49:46,373 [wrapper] apfmon messages muted
[2025-11-22 21:49:46] 2025-11-23 02:49:46,376 [wrapper] ==== wrapper stdout END ====
[2025-11-22 21:49:46] 2025-11-23 02:49:46,378 [wrapper] ==== wrapper stderr END ====
[2025-11-22 21:49:46]  *** Error codes and diagnostics ***
[2025-11-22 21:49:46]     "exeErrorCode": 0,
[2025-11-22 21:49:46]     "exeErrorDiag": "",
[2025-11-22 21:49:46]     "pilotErrorCode": 0,
[2025-11-22 21:49:46]     "pilotErrorDiag": "",
[2025-11-22 21:49:46]  *** Listing of results directory ***
[2025-11-22 21:49:46] total 1298680
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 10:53 pilot3.tar.gz
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 11:14 queuedata.json
[2025-11-22 21:49:46] -rwx------. 1 boincer umatlas     36292 Nov 21 11:15 runpilot2-wrapper.sh
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas       100 Nov 22 13:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 21:49:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 13:07 run_atlas
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas       105 Nov 22 13:07 job.xml
[2025-11-22 21:49:46] -rw-r--r--. 2 boincer umatlas 406933988 Nov 22 13:07 EVNT.47483658._001026.pool.root.1
[2025-11-22 21:49:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 13:07 start_atlas.sh
[2025-11-22 21:49:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 13:07 shared
[2025-11-22 21:49:46] -rw-r--r--. 2 boincer umatlas    590105 Nov 22 13:07 input.tar.gz
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas         0 Nov 22 13:07 boinc_lockfile
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas      2784 Nov 22 13:07 pandaJob.out
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas    989776 Nov 22 13:07 agis_schedconf.cvmfs.json
[2025-11-22 21:49:46] drwx------. 5 boincer umatlas      4096 Nov 22 13:07 pilot3
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas       532 Nov 22 21:41 boinc_task_state.xml
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas      6530 Nov 22 21:46 init_data.xml
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas 906214096 Nov 22 21:48 HITS.47556149._000127.pool.root.1
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas      1045 Nov 22 21:48 memory_monitor_summary.json
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas   1526164 Nov 22 21:48 agis_ddmendpoints.agis.ALL.json
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas   1920426 Nov 22 21:49 log.47556149._000127.job.log.tgz.1
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas        95 Nov 22 21:49 pilot_heartbeat.json
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas      8614 Nov 22 21:49 heartbeat.json
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 21:49 boinc_mmap_file
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas        29 Nov 22 21:49 wrapper_checkpoint.txt
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas      4939 Nov 22 21:49 pilotlog.txt
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas   4470695 Nov 22 21:49 log.47556149._000127.job.log.1
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas       353 Nov 22 21:49 output.list
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas       620 Nov 22 21:49 runtime_log
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas   6410240 Nov 22 21:49 result.tar.gz
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas      8818 Nov 22 21:49 runtime_log.err
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas       659 Nov 22 21:49 kBlKDmjyig8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQjHKDmqMVE1m.diag
[2025-11-22 21:49:46] -rw-r--r--. 1 boincer umatlas     21307 Nov 22 21:49 stderr.txt
[2025-11-22 21:49:46] HITS file was successfully produced:
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas 906214096 Nov 22 21:48 shared/HITS.pool.root.1
[2025-11-22 21:49:46]  *** Contents of shared directory: ***
[2025-11-22 21:49:46] total 1289236
[2025-11-22 21:49:46] -rw-r--r--. 2 boincer umatlas 406933988 Nov 22 13:07 ATLAS.root_0
[2025-11-22 21:49:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 13:07 start_atlas.sh
[2025-11-22 21:49:46] -rw-r--r--. 2 boincer umatlas    590105 Nov 22 13:07 input.tar.gz
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas 906214096 Nov 22 21:48 HITS.pool.root.1
[2025-11-22 21:49:46] -rw-------. 1 boincer umatlas   6410240 Nov 22 21:49 result.tar.gz
21:49:48 (2146196): run_atlas exited; CPU time 276707.212173
21:49:48 (2146196): called boinc_finish(0)

</stderr_txt>
]]>

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