Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:26:26 (1702323): wrapper (7.7.26015): starting
02:26:26 (1702323): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 02:26:26] Arguments: --nthreads 12
[2025-11-25 02:26:26] Threads: 12
[2025-11-25 02:26:26] Checking for CVMFS
[2025-11-25 02:26:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:26:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:26:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:26:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:26:26] 2.13.3.0 11850 4955 81724 153265 2 81 3574722 4097025 851 130560 0 3864525 99.991 168747 22347 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 02:26:26] CVMFS is ok
[2025-11-25 02:26:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 02:26:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 02:26:26] Further information can be found at the LHC@home message board.
[2025-11-25 02:26:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:26:26] Checking for apptainer binary...
[2025-11-25 02:26:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 02:26:26] Running /usr/bin/apptainer --version
[2025-11-25 02:26:26] apptainer version 1.4.4-1.el9
[2025-11-25 02:26:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:26:26] pckelar1.cern.ch
[2025-11-25 02:26:26] apptainer works
[2025-11-25 02:26:26] Set ATHENA_PROC_NUMBER=12
[2025-11-25 02:26:26] Set ATHENA_CORE_NUMBER=12
[2025-11-25 02:26:26] Starting ATLAS job with PandaID=6894276350
[2025-11-25 02:26:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 14:16:50]  *** The last 200 lines of the pilot log: ***
[2025-11-25 14:16:50] 2025-11-25 13:15:55,748 | INFO     | monitor loop #3119: job 0:6894276350 is in state 'finished'
[2025-11-25 14:16:50] 2025-11-25 13:15:55,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 14:16:50] 2025-11-25 13:15:56,259 | INFO     | time since job start (42562s) is within the limit (172800.0s)
[2025-11-25 14:16:50] 2025-11-25 13:15:56,895 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 14:16:50] 2025-11-25 13:15:56,902 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2816.7094999999995
[2025-11-25 14:16:50] 2025-11-25 13:15:56,907 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6894276350/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 14:16:50] 2025-11-25 13:15:56,908 | INFO     | extracted standard info from prmon json
[2025-11-25 14:16:50] 2025-11-25 13:15:56,908 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 14:16:50] 2025-11-25 13:15:56,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 14:16:50] 2025-11-25 13:15:56,917 | INFO     | fitting pss+swap vs Time
[2025-11-25 14:16:50] 2025-11-25 13:15:56,918 | INFO     | sum of square deviations: 105449263618.13326
[2025-11-25 14:16:50] 2025-11-25 13:15:56,927 | INFO     | sum of deviations: 1288174678006.4353
[2025-11-25 14:16:50] 2025-11-25 13:15:56,927 | INFO     | mean x: 1764055277.4770772
[2025-11-25 14:16:50] 2025-11-25 13:15:56,927 | INFO     | mean y: 3628742.8395415475
[2025-11-25 14:16:50] 2025-11-25 13:15:56,927 | INFO     | intersect: -21546178824.131638
[2025-11-25 14:16:50] 2025-11-25 13:15:56,928 | INFO     | chi2: 5.5300886734101065
[2025-11-25 14:16:50] 2025-11-25 13:15:56,928 | INFO     | sum of square deviations: 103199559670.82568
[2025-11-25 14:16:50] 2025-11-25 13:15:56,937 | INFO     | sum of deviations: 1584408826277.8572
[2025-11-25 14:16:50] 2025-11-25 13:15:56,937 | INFO     | mean x: 1764055124.984127
[2025-11-25 14:16:50] 2025-11-25 13:15:56,937 | INFO     | mean y: 3648810.350649351
[2025-11-25 14:16:50] 2025-11-25 13:15:56,937 | INFO     | intersect: -27079649984.53438
[2025-11-25 14:16:50] 2025-11-25 13:15:56,938 | INFO     | chi2: 2.265041950842675
[2025-11-25 14:16:50] 2025-11-25 13:15:56,938 | INFO     | current chi2=2.265041950842675 (change=59.04148948400232 %)
[2025-11-25 14:16:50] 2025-11-25 13:15:56,939 | INFO     | sum of square deviations: 100982004707.9071
[2025-11-25 14:16:50] 2025-11-25 13:15:56,947 | INFO     | sum of deviations: 1621444889253.2092
[2025-11-25 14:16:50] 2025-11-25 13:15:56,947 | INFO     | mean x: 1764054972.488372
[2025-11-25 14:16:50] 2025-11-25 13:15:56,947 | INFO     | mean y: 3651341.0886627906
[2025-11-25 14:16:50] 2025-11-25 13:15:56,947 | INFO     | intersect: -28321374764.07255
[2025-11-25 14:16:50] 2025-11-25 13:15:56,948 | INFO     | chi2: 2.01945051202728
[2025-11-25 14:16:50] 2025-11-25 13:15:56,948 | INFO     | current chi2=2.01945051202728 (change=10.842688309769546 %)
[2025-11-25 14:16:50] 2025-11-25 13:15:56,948 | INFO     | right removable region: 687
[2025-11-25 14:16:50] 2025-11-25 13:15:56,949 | INFO     | sum of square deviations: 103199185985.79211
[2025-11-25 14:16:50] 2025-11-25 13:15:56,958 | INFO     | sum of deviations: 1076604846406.418
[2025-11-25 14:16:50] 2025-11-25 13:15:56,958 | INFO     | mean x: 1764055429.982684
[2025-11-25 14:16:50] 2025-11-25 13:15:56,958 | INFO     | mean y: 3643052.118326118
[2025-11-25 14:16:50] 2025-11-25 13:15:56,958 | INFO     | intersect: -18399512041.666862
[2025-11-25 14:16:50] 2025-11-25 13:15:56,959 | INFO     | chi2: 3.728387847193277
[2025-11-25 14:16:50] 2025-11-25 13:15:56,959 | INFO     | current chi2=3.728387847193277 (change=32.579962684501005 %)
[2025-11-25 14:16:50] 2025-11-25 13:15:56,959 | INFO     | sum of square deviations: 100981468581.82411
[2025-11-25 14:16:50] 2025-11-25 13:15:56,968 | INFO     | sum of deviations: 1018597659986.0981
[2025-11-25 14:16:50] 2025-11-25 13:15:56,968 | INFO     | mean x: 1764055582.4840117
[2025-11-25 14:16:50] 2025-11-25 13:15:56,968 | INFO     | mean y: 3647038.9636627906
[2025-11-25 14:16:50] 2025-11-25 13:15:56,968 | INFO     | intersect: -17790339458.149426
[2025-11-25 14:16:50] 2025-11-25 13:15:56,969 | INFO     | chi2: 3.688534499371671
[2025-11-25 14:16:50] 2025-11-25 13:15:56,969 | INFO     | current chi2=3.688534499371671 (change=1.0689163642566752 %)
[2025-11-25 14:16:50] 2025-11-25 13:15:56,969 | INFO     | left removable region: 20
[2025-11-25 14:16:50] 2025-11-25 13:15:56,970 | INFO     | sum of square deviations: 92014286976.98654
[2025-11-25 14:16:50] 2025-11-25 13:15:56,978 | INFO     | sum of deviations: 1250696560424.206
[2025-11-25 14:16:50] 2025-11-25 13:15:56,978 | INFO     | mean x: 1764055551.9955022
[2025-11-25 14:16:50] 2025-11-25 13:15:56,978 | INFO     | mean y: 3676855.0689655175
[2025-11-25 14:16:50] 2025-11-25 13:15:56,978 | INFO     | intersect: -23974101854.772152
[2025-11-25 14:16:50] 2025-11-25 13:15:56,979 | INFO     | chi2: 0.12955226605047343
[2025-11-25 14:16:50] 2025-11-25 13:15:56,979 | INFO     | current memory leak: 13.59 B/s (using 667 data points, chi2=0.13)
[2025-11-25 14:16:50] 2025-11-25 13:15:56,980 | INFO     | could have reported an average CPU frequency of 2805 MHz (27 samples)
[2025-11-25 14:16:50] 2025-11-25 13:15:56,980 | INFO     | ..............................
[2025-11-25 14:16:50] 2025-11-25 13:15:56,980 | INFO     | . Timing measurements:
[2025-11-25 14:16:50] 2025-11-25 13:15:56,980 | INFO     | . get job = 0 s
[2025-11-25 14:16:50] 2025-11-25 13:15:56,980 | INFO     | . initial setup = 1 s
[2025-11-25 14:16:50] 2025-11-25 13:15:56,980 | INFO     | . payload setup = 5 s
[2025-11-25 14:16:50] 2025-11-25 13:15:56,980 | INFO     | . stage-in = 0 s
[2025-11-25 14:16:50] 2025-11-25 13:15:56,980 | INFO     | . payload execution = 42528 s
[2025-11-25 14:16:50] 2025-11-25 13:15:56,980 | INFO     | . stage-out = 2 s
[2025-11-25 14:16:50] 2025-11-25 13:15:56,980 | INFO     | . log creation = 0 s
[2025-11-25 14:16:50] 2025-11-25 13:15:56,980 | INFO     | ..............................
[2025-11-25 14:16:50] 2025-11-25 13:15:57,220 | INFO     | 
[2025-11-25 14:16:50] 2025-11-25 13:15:57,220 | INFO     | job summary report
[2025-11-25 14:16:50] 2025-11-25 13:15:57,220 | INFO     | --------------------------------------------------
[2025-11-25 14:16:50] 2025-11-25 13:15:57,220 | INFO     | PanDA job id: 6894276350
[2025-11-25 14:16:50] 2025-11-25 13:15:57,221 | INFO     | task id: 47533967
[2025-11-25 14:16:50] 2025-11-25 13:15:57,221 | INFO     | errors: (none)
[2025-11-25 14:16:50] 2025-11-25 13:15:57,221 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 14:16:50] 2025-11-25 13:15:57,221 | INFO     | pilot state: finished 
[2025-11-25 14:16:50] 2025-11-25 13:15:57,221 | INFO     | transexitcode: 0
[2025-11-25 14:16:50] 2025-11-25 13:15:57,221 | INFO     | exeerrorcode: 0
[2025-11-25 14:16:50] 2025-11-25 13:15:57,222 | INFO     | exeerrordiag: 
[2025-11-25 14:16:50] 2025-11-25 13:15:57,222 | INFO     | exitcode: 0
[2025-11-25 14:16:50] 2025-11-25 13:15:57,222 | INFO     | exitmsg: OK
[2025-11-25 14:16:50] 2025-11-25 13:15:57,222 | INFO     | cpuconsumptiontime: 497978 s
[2025-11-25 14:16:50] 2025-11-25 13:15:57,222 | INFO     | nevents: 1000
[2025-11-25 14:16:50] 2025-11-25 13:15:57,222 | INFO     | neventsw: 0
[2025-11-25 14:16:50] 2025-11-25 13:15:57,223 | INFO     | pid: 1713705
[2025-11-25 14:16:50] 2025-11-25 13:15:57,223 | INFO     | pgrp: 1713705
[2025-11-25 14:16:50] 2025-11-25 13:15:57,223 | INFO     | corecount: 12
[2025-11-25 14:16:50] 2025-11-25 13:15:57,223 | INFO     | event service: False
[2025-11-25 14:16:50] 2025-11-25 13:15:57,223 | INFO     | sizes: {0: 2284310, 4: 2284572, 11: 2284600, 42538: 2329650, 42542: 2338649, 42543: 2338705, 42549: 2339079}
[2025-11-25 14:16:50] 2025-11-25 13:15:57,223 | INFO     | --------------------------------------------------
[2025-11-25 14:16:50] 2025-11-25 13:15:57,224 | INFO     | 
[2025-11-25 14:16:50] 2025-11-25 13:15:57,224 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-25 14:16:50] 2025-11-25 13:15:57,239 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,240 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,242 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,242 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,242 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 14:16:50] 2025-11-25 13:15:57,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,242 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 14:16:50] 2025-11-25 13:15:57,243 | INFO     | job 6894276350 has completed (purged errors)
[2025-11-25 14:16:50] 2025-11-25 13:15:57,243 | INFO     | overall cleanup function is called
[2025-11-25 14:16:50] 2025-11-25 13:15:58,260 | INFO     | --- collectZombieJob: --- 10, [1713705]
[2025-11-25 14:16:50] 2025-11-25 13:15:58,260 | INFO     | zombie collector waiting for pid 1713705
[2025-11-25 14:16:50] 2025-11-25 13:15:58,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 14:16:50] 2025-11-25 13:15:58,261 | INFO     | collected zombie processes
[2025-11-25 14:16:50] 2025-11-25 13:15:58,261 | INFO     | will attempt to kill all subprocesses of pid=1713705
[2025-11-25 14:16:50] 2025-11-25 13:15:58,450 | INFO     | process IDs to be killed: [1713705] (in reverse order)
[2025-11-25 14:16:50] 2025-11-25 13:15:58,509 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 14:16:50] 2025-11-25 13:15:58,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 14:16:50] 2025-11-25 13:15:58,517 | INFO     | did not find any defunct processes belonging to 1713705
[2025-11-25 14:16:50] 2025-11-25 13:15:58,524 | INFO     | did not find any defunct processes belonging to 1713705
[2025-11-25 14:16:50] 2025-11-25 13:15:58,526 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 14:16:50] 2025-11-25 13:15:58,526 | INFO     | ready for new job
[2025-11-25 14:16:50] 2025-11-25 13:15:58,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 14:16:50] 2025-11-25 13:15:58,529 | INFO     | ***************************************
[2025-11-25 14:16:50] 2025-11-25 13:15:58,530 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 14:16:50] 2025-11-25 13:15:58,530 | INFO     | ***************************************
[2025-11-25 14:16:50] 2025-11-25 13:15:58,530 | INFO     | 
[2025-11-25 14:16:50] 2025-11-25 13:15:58,531 | INFO     | architecture information:
[2025-11-25 14:16:50] 2025-11-25 13:15:58,532 | INFO     | executing command: cat /etc/os-release
[2025-11-25 14:16:50] 2025-11-25 13:15:58,547 | INFO     | cat /etc/os-release:
[2025-11-25 14:16:50] NAME="CentOS Linux"
[2025-11-25 14:16:50] VERSION="7 (Core)"
[2025-11-25 14:16:50] ID="centos"
[2025-11-25 14:16:50] ID_LIKE="rhel fedora"
[2025-11-25 14:16:50] VERSION_ID="7"
[2025-11-25 14:16:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 14:16:50] ANSI_COLOR="0;31"
[2025-11-25 14:16:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 14:16:50] HOME_URL="https://www.centos.org/"
[2025-11-25 14:16:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 14:16:50] 
[2025-11-25 14:16:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 14:16:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 14:16:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 14:16:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 14:16:50] 
[2025-11-25 14:16:50] 2025-11-25 13:15:58,548 | INFO     | ***************************************
[2025-11-25 14:16:50] 2025-11-25 13:15:59,050 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-25 14:16:50] 2025-11-25 13:15:59,067 | INFO     | sufficient remaining disk space (776697020416 B)
[2025-11-25 14:16:50] 2025-11-25 13:15:59,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 14:16:50] 2025-11-25 13:15:59,068 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 14:16:50] 2025-11-25 13:15:59,068 | INFO     | update_server=False
[2025-11-25 14:16:50] 2025-11-25 13:15:59,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 14:16:50] 2025-11-25 13:15:59,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:16:50] 2025-11-25 13:15:59,255 | INFO     | aborting loop
[2025-11-25 14:16:50] 2025-11-25 13:15:59,301 | INFO     | all payload control threads have been joined
[2025-11-25 14:16:50] 2025-11-25 13:15:59,669 | INFO     | all data control threads have been joined
[2025-11-25 14:16:50] 2025-11-25 13:16:00,071 | INFO     | [job] retrieve thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:00,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:00,171 | INFO     | [data] copytool_in thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:00,177 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:00,260 | INFO     | [job] job monitor thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:00,304 | INFO     | [payload] control thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:00,313 | INFO     | all job control threads have been joined
[2025-11-25 14:16:50] 2025-11-25 13:16:00,345 | INFO     | [payload] validate_post thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:00,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 14:16:50] 2025-11-25 13:16:00,674 | INFO     | [data] control thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:00,688 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:01,258 | INFO     | [job] validate thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:01,265 | INFO     | [payload] failed_post thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:01,318 | INFO     | [job] control thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:01,439 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:01,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 14:16:50] 2025-11-25 13:16:02,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:16:50] 2025-11-25 13:16:02,358 | INFO     | [data] copytool_out thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:03,066 | INFO     | [job] queue monitor thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:05,643 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 14:16:50] 2025-11-25 13:16:29,503 | INFO     | PID=1706196 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 14:16:50] 2025-11-25 13:16:29,503 | INFO     | .. there are 2 such processes running
[2025-11-25 14:16:50] 2025-11-25 13:16:29,504 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 14:16:50] 2025-11-25 13:16:29,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 14:16:50] 2025-11-25 13:16:29,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 14:16:50] 2025-11-25 13:16:44,428 | INFO     | [monitor] cgroup control has ended
[2025-11-25 14:16:50] 2025-11-25 13:16:45,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566248826688)>', '<ExcThread(monitor, started 140565968553728)>']
[2025-11-25 14:16:50] 2025-11-25 13:16:46,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 14:16:50] 2025-11-25 13:16:46,581 | INFO     | [monitor] control thread has ended
[2025-11-25 14:16:50] 2025-11-25 13:16:50,796 | INFO     | all workflow threads have been joined
[2025-11-25 14:16:50] 2025-11-25 13:16:50,796 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 14:16:50] 2025-11-25 13:16:50,797 | INFO     | traces error code: 0
[2025-11-25 14:16:50] 2025-11-25 13:16:50,797 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 14:16:50] 2025-11-25 13:16:50,889 [wrapper] ==== pilot stdout END ====
[2025-11-25 14:16:50] 2025-11-25 13:16:50,891 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 14:16:50] 2025-11-25 13:16:50,893 [wrapper] pilotpid: 1706196
[2025-11-25 14:16:50] 2025-11-25 13:16:50,895 [wrapper] Pilot exit status: 0
[2025-11-25 14:16:50] 2025-11-25 13:16:50,902 [wrapper] pandaids: 6894276350
[2025-11-25 14:16:50] 2025-11-25 13:16:50,926 [wrapper] cleanup supervisor_pilot 1943696 1706197
[2025-11-25 14:16:50] 2025-11-25 13:16:50,929 [wrapper] Test setup, not cleaning
[2025-11-25 14:16:50] 2025-11-25 13:16:50,930 [wrapper] apfmon messages muted
[2025-11-25 14:16:50] 2025-11-25 13:16:50,932 [wrapper] ==== wrapper stdout END ====
[2025-11-25 14:16:50] 2025-11-25 13:16:50,934 [wrapper] ==== wrapper stderr END ====
[2025-11-25 14:16:50]  *** Error codes and diagnostics ***
[2025-11-25 14:16:50]     "exeErrorCode": 0,
[2025-11-25 14:16:50]     "exeErrorDiag": "",
[2025-11-25 14:16:50]     "pilotErrorCode": 0,
[2025-11-25 14:16:50]     "pilotErrorDiag": "",
[2025-11-25 14:16:50]  *** Listing of results directory ***
[2025-11-25 14:16:50] total 1327348
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc      5112 Nov 21 08:44 queuedata.json
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc    576529 Nov 21 08:44 pilot3.tar.gz
[2025-11-25 14:16:50] -rwx------ 1 boinc boinc     36292 Nov 21 08:45 runpilot2-wrapper.sh
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc       100 Nov 25 02:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 14:16:50] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 02:26 run_atlas
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc       105 Nov 25 02:26 job.xml
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc      6295 Nov 25 02:26 init_data.xml
[2025-11-25 14:16:50] -rw-r--r-- 2 boinc boinc 411757236 Nov 25 02:26 EVNT.47493127._002314.pool.root.1
[2025-11-25 14:16:50] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:26 start_atlas.sh
[2025-11-25 14:16:50] drwxrwx--x 2 boinc boinc        68 Nov 25 02:26 shared
[2025-11-25 14:16:50] -rw-r--r-- 2 boinc boinc    590104 Nov 25 02:26 input.tar.gz
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc         0 Nov 25 02:26 boinc_lockfile
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc      2786 Nov 25 02:26 pandaJob.out
[2025-11-25 14:16:50] -rw------- 1 boinc boinc    991801 Nov 25 02:26 agis_schedconf.cvmfs.json
[2025-11-25 14:16:50] drwx------ 5 boinc boinc      4096 Nov 25 02:26 pilot3
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc       533 Nov 25 14:07 boinc_task_state.xml
[2025-11-25 14:16:50] -rw------- 1 boinc boinc 926743199 Nov 25 14:15 HITS.47533967._002856.pool.root.1
[2025-11-25 14:16:50] -rw------- 1 boinc boinc      1038 Nov 25 14:15 memory_monitor_summary.json
[2025-11-25 14:16:50] -rw------- 1 boinc boinc   1516240 Nov 25 14:15 agis_ddmendpoints.agis.ALL.json
[2025-11-25 14:16:50] -rw------- 1 boinc boinc   2387494 Nov 25 14:15 log.47533967._002856.job.log.tgz.1
[2025-11-25 14:16:50] -rw------- 1 boinc boinc      8627 Nov 25 14:15 heartbeat.json
[2025-11-25 14:16:50] -rw------- 1 boinc boinc        95 Nov 25 14:16 pilot_heartbeat.json
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc      8192 Nov 25 14:16 boinc_mmap_file
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc        29 Nov 25 14:16 wrapper_checkpoint.txt
[2025-11-25 14:16:50] -rw------- 1 boinc boinc      4824 Nov 25 14:16 pilotlog.txt
[2025-11-25 14:16:50] -rw------- 1 boinc boinc   6014255 Nov 25 14:16 log.47533967._002856.job.log.1
[2025-11-25 14:16:50] -rw------- 1 boinc boinc       353 Nov 25 14:16 output.list
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc       620 Nov 25 14:16 runtime_log
[2025-11-25 14:16:50] -rw------- 1 boinc boinc   8417280 Nov 25 14:16 result.tar.gz
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc      8842 Nov 25 14:16 runtime_log.err
[2025-11-25 14:16:50] -rw------- 1 boinc boinc       665 Nov 25 14:16 3lzLDme0ag8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3RHKDmZr60wm.diag
[2025-11-25 14:16:50] -rw-r--r-- 1 boinc boinc     21310 Nov 25 14:16 stderr.txt
[2025-11-25 14:16:51] HITS file was successfully produced:
[2025-11-25 14:16:51] -rw------- 1 boinc boinc 926743199 Nov 25 14:15 shared/HITS.pool.root.1
[2025-11-25 14:16:51]  *** Contents of shared directory: ***
[2025-11-25 14:16:51] total 1315948
[2025-11-25 14:16:51] -rw-r--r-- 2 boinc boinc 411757236 Nov 25 02:26 ATLAS.root_0
[2025-11-25 14:16:51] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:26 start_atlas.sh
[2025-11-25 14:16:51] -rw-r--r-- 2 boinc boinc    590104 Nov 25 02:26 input.tar.gz
[2025-11-25 14:16:51] -rw------- 1 boinc boinc 926743199 Nov 25 14:15 HITS.pool.root.1
[2025-11-25 14:16:51] -rw------- 1 boinc boinc   8417280 Nov 25 14:16 result.tar.gz
14:16:52 (1702323): run_atlas exited; CPU time 498204.452502
14:16:52 (1702323): called boinc_finish(0)

</stderr_txt>
]]>

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