Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:01 (1531560): wrapper (7.7.26015): starting
00:04:01 (1531560): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 00:04:01] Arguments: --nthreads 12
[2025-11-23 00:04:01] Threads: 12
[2025-11-23 00:04:01] Checking for CVMFS
[2025-11-23 00:04:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:04:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:04:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:04:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:04:02] 2.13.2.0 4057 28137 177200 153197 2 64 37114200 39288833 8173 16776704 0 18667235 99.635 16968971 39118 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 00:04:02] CVMFS is ok
[2025-11-23 00:04:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 00:04:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 00:04:02] Further information can be found at the LHC@home message board.
[2025-11-23 00:04:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:04:02] Checking for apptainer binary...
[2025-11-23 00:04:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:04:02] Running /usr/bin/apptainer --version
[2025-11-23 00:04:02] apptainer version 1.4.4-1.el9
[2025-11-23 00:04:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:04:02] c-210-24.aglt2.org
[2025-11-23 00:04:02] apptainer works
[2025-11-23 00:04:02] Set ATHENA_PROC_NUMBER=12
[2025-11-23 00:04:02] Set ATHENA_CORE_NUMBER=12
[2025-11-23 00:04:02] Starting ATLAS job with PandaID=6895327504
[2025-11-23 00:04:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 23:07:55]  *** The last 200 lines of the pilot log: ***
[2025-11-23 23:07:55] 2025-11-24 01:34:59,610 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 23:07:55] 2025-11-24 01:34:59,618 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.0509749999997
[2025-11-23 23:07:55] 2025-11-24 01:34:59,624 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895327504/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 23:07:55] 2025-11-24 01:34:59,625 | INFO     | extracted standard info from prmon json
[2025-11-23 23:07:55] 2025-11-24 01:34:59,626 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 23:07:55] 2025-11-24 01:34:59,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 23:07:55] 2025-11-24 01:34:59,650 | INFO     | fitting pss+swap vs Time
[2025-11-23 23:07:55] 2025-11-24 01:34:59,652 | INFO     | sum of square deviations: 549293518111.5086
[2025-11-23 23:07:55] 2025-11-24 01:34:59,693 | INFO     | sum of deviations: 3481778908361.851
[2025-11-23 23:07:55] 2025-11-24 01:34:59,694 | INFO     | mean x: 1763911177.053719
[2025-11-23 23:07:55] 2025-11-24 01:34:59,694 | INFO     | mean y: 3593883.3867768594
[2025-11-23 23:07:55] 2025-11-24 01:34:59,694 | INFO     | intersect: -11177220253.295988
[2025-11-23 23:07:55] 2025-11-24 01:34:59,696 | INFO     | chi2: 12.055932110226301
[2025-11-23 23:07:55] 2025-11-24 01:34:59,698 | INFO     | sum of square deviations: 542514144273.3608
[2025-11-23 23:07:55] 2025-11-24 01:34:59,738 | INFO     | sum of deviations: 4017492585161.2476
[2025-11-23 23:07:55] 2025-11-24 01:34:59,739 | INFO     | mean x: 1763911024.5809128
[2025-11-23 23:07:55] 2025-11-24 01:34:59,739 | INFO     | mean y: 3605931.141078838
[2025-11-23 23:07:55] 2025-11-24 01:34:59,739 | INFO     | intersect: -13058725322.230387
[2025-11-23 23:07:55] 2025-11-24 01:34:59,741 | INFO     | chi2: 8.497626067292419
[2025-11-23 23:07:55] 2025-11-24 01:34:59,741 | INFO     | current chi2=8.497626067292419 (change=29.514980761343136 %)
[2025-11-23 23:07:55] 2025-11-24 01:34:59,743 | INFO     | sum of square deviations: 535790524264.77045
[2025-11-23 23:07:55] 2025-11-24 01:34:59,785 | INFO     | sum of deviations: 4444306990272.727
[2025-11-23 23:07:55] 2025-11-24 01:34:59,785 | INFO     | mean x: 1763910872.105
[2025-11-23 23:07:55] 2025-11-24 01:34:59,785 | INFO     | mean y: 3615605.946666667
[2025-11-23 23:07:55] 2025-11-24 01:34:59,785 | INFO     | intersect: -14627776820.919683
[2025-11-23 23:07:55] 2025-11-24 01:34:59,787 | INFO     | chi2: 6.0606740365322755
[2025-11-23 23:07:55] 2025-11-24 01:34:59,787 | INFO     | current chi2=6.0606740365322755 (change=28.678033270256908 %)
[2025-11-23 23:07:55] 2025-11-24 01:34:59,789 | INFO     | sum of square deviations: 529122426619.796
[2025-11-23 23:07:55] 2025-11-24 01:34:59,826 | INFO     | sum of deviations: 4765204103457.23
[2025-11-23 23:07:55] 2025-11-24 01:34:59,826 | INFO     | mean x: 1763910719.6259415
[2025-11-23 23:07:55] 2025-11-24 01:34:59,826 | INFO     | mean y: 3622943.1280334727
[2025-11-23 23:07:55] 2025-11-24 01:34:59,826 | INFO     | intersect: -15881915405.70003
[2025-11-23 23:07:55] 2025-11-24 01:34:59,828 | INFO     | chi2: 4.646767184883068
[2025-11-23 23:07:55] 2025-11-24 01:34:59,828 | INFO     | current chi2=4.646767184883068 (change=23.32920139123998 %)
[2025-11-23 23:07:55] 2025-11-24 01:34:59,828 | INFO     | right removable region: 1194
[2025-11-23 23:07:55] 2025-11-24 01:34:59,830 | INFO     | sum of square deviations: 542509306973.3616
[2025-11-23 23:07:55] 2025-11-24 01:34:59,866 | INFO     | sum of deviations: 2963812435844.4253
[2025-11-23 23:07:55] 2025-11-24 01:34:59,867 | INFO     | mean x: 1763911329.5809128
[2025-11-23 23:07:55] 2025-11-24 01:34:59,867 | INFO     | mean y: 3605523.6008298756
[2025-11-23 23:07:55] 2025-11-24 01:34:59,867 | INFO     | intersect: -9632915485.605536
[2025-11-23 23:07:55] 2025-11-24 01:34:59,869 | INFO     | chi2: 9.05025202184277
[2025-11-23 23:07:55] 2025-11-24 01:34:59,869 | INFO     | current chi2=9.05025202184277 (change=24.931129844651323 %)
[2025-11-23 23:07:55] 2025-11-24 01:34:59,869 | INFO     | left removable region: 10
[2025-11-23 23:07:55] 2025-11-24 01:34:59,871 | INFO     | sum of square deviations: 514640283310.1589
[2025-11-23 23:07:55] 2025-11-24 01:34:59,907 | INFO     | sum of deviations: 4167659502104.082
[2025-11-23 23:07:55] 2025-11-24 01:34:59,908 | INFO     | mean x: 1763910994.1739864
[2025-11-23 23:07:55] 2025-11-24 01:34:59,908 | INFO     | mean y: 3639586.5092905406
[2025-11-23 23:07:55] 2025-11-24 01:34:59,908 | INFO     | intersect: -14280862917.746885
[2025-11-23 23:07:55] 2025-11-24 01:34:59,910 | INFO     | chi2: 1.225576703042869
[2025-11-23 23:07:55] 2025-11-24 01:34:59,910 | INFO     | current memory leak: 8.10 B/s (using 1184 data points, chi2=1.23)
[2025-11-23 23:07:55] 2025-11-24 01:34:59,912 | INFO     | could have reported an average CPU frequency of 2600 MHz (44 samples)
[2025-11-23 23:07:55] 2025-11-24 01:34:59,912 | INFO     | ..............................
[2025-11-23 23:07:55] 2025-11-24 01:34:59,912 | INFO     | . Timing measurements:
[2025-11-23 23:07:55] 2025-11-24 01:34:59,912 | INFO     | . get job = 0 s
[2025-11-23 23:07:55] 2025-11-24 01:34:59,912 | INFO     | . initial setup = 3 s
[2025-11-23 23:07:55] 2025-11-24 01:34:59,912 | INFO     | . payload setup = 9 s
[2025-11-23 23:07:55] 2025-11-24 01:34:59,912 | INFO     | . stage-in = 0 s
[2025-11-23 23:07:55] 2025-11-24 01:34:59,913 | INFO     | . payload execution = 73776 s
[2025-11-23 23:07:55] 2025-11-24 01:34:59,913 | INFO     | . stage-out = 14 s
[2025-11-23 23:07:55] 2025-11-24 01:34:59,913 | INFO     | . log creation = 1 s
[2025-11-23 23:07:55] 2025-11-24 01:34:59,913 | INFO     | ..............................
[2025-11-23 23:07:55] 2025-11-24 01:35:00,148 | INFO     | time since job start (73840s) is within the limit (172800.0s)
[2025-11-23 23:07:55] 2025-11-24 01:35:00,206 | INFO     | 
[2025-11-23 23:07:55] 2025-11-24 01:35:00,207 | INFO     | job summary report
[2025-11-23 23:07:55] 2025-11-24 01:35:00,207 | INFO     | --------------------------------------------------
[2025-11-23 23:07:55] 2025-11-24 01:35:00,207 | INFO     | PanDA job id: 6895327504
[2025-11-23 23:07:55] 2025-11-24 01:35:00,207 | INFO     | task id: 47556137
[2025-11-23 23:07:55] 2025-11-24 01:35:00,207 | INFO     | errors: (none)
[2025-11-23 23:07:55] 2025-11-24 01:35:00,207 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 23:07:55] 2025-11-24 01:35:00,207 | INFO     | pilot state: finished 
[2025-11-23 23:07:55] 2025-11-24 01:35:00,207 | INFO     | transexitcode: 0
[2025-11-23 23:07:55] 2025-11-24 01:35:00,207 | INFO     | exeerrorcode: 0
[2025-11-23 23:07:55] 2025-11-24 01:35:00,208 | INFO     | exeerrordiag: 
[2025-11-23 23:07:55] 2025-11-24 01:35:00,208 | INFO     | exitcode: 0
[2025-11-23 23:07:55] 2025-11-24 01:35:00,208 | INFO     | exitmsg: OK
[2025-11-23 23:07:55] 2025-11-24 01:35:00,208 | INFO     | cpuconsumptiontime: 304884 s
[2025-11-23 23:07:55] 2025-11-24 01:35:00,208 | INFO     | nevents: 1000
[2025-11-23 23:07:55] 2025-11-24 01:35:00,208 | INFO     | neventsw: 0
[2025-11-23 23:07:55] 2025-11-24 01:35:00,208 | INFO     | pid: 1541658
[2025-11-23 23:07:55] 2025-11-24 01:35:00,208 | INFO     | pgrp: 1541658
[2025-11-23 23:07:55] 2025-11-24 01:35:00,208 | INFO     | corecount: 12
[2025-11-23 23:07:55] 2025-11-24 01:35:00,208 | INFO     | event service: False
[2025-11-23 23:07:55] 2025-11-24 01:35:00,209 | INFO     | sizes: {0: 2298803, 1: 2298803, 7: 2299093, 11: 2299121, 73790: 2358624, 73791: 2358623, 73806: 2368103, 73821: 2368071}
[2025-11-23 23:07:55] 2025-11-24 01:35:00,209 | INFO     | --------------------------------------------------
[2025-11-23 23:07:55] 2025-11-24 01:35:00,209 | INFO     | 
[2025-11-23 23:07:55] 2025-11-24 01:35:00,209 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 23:07:55] 2025-11-24 01:35:00,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,606 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,606 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,606 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,608 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 23:07:55] 2025-11-24 01:35:00,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,608 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 23:07:55] 2025-11-24 01:35:00,608 | INFO     | job 6895327504 has completed (purged errors)
[2025-11-23 23:07:55] 2025-11-24 01:35:00,609 | INFO     | overall cleanup function is called
[2025-11-23 23:07:55] 2025-11-24 01:35:01,761 | INFO     | --- collectZombieJob: --- 10, [1541658]
[2025-11-23 23:07:55] 2025-11-24 01:35:01,761 | INFO     | zombie collector waiting for pid 1541658
[2025-11-23 23:07:55] 2025-11-24 01:35:01,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 23:07:55] 2025-11-24 01:35:01,762 | INFO     | collected zombie processes
[2025-11-23 23:07:55] 2025-11-24 01:35:01,762 | INFO     | will attempt to kill all subprocesses of pid=1541658
[2025-11-23 23:07:55] 2025-11-24 01:35:02,007 | INFO     | process IDs to be killed: [1541658] (in reverse order)
[2025-11-23 23:07:55] 2025-11-24 01:35:02,128 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 23:07:55] 2025-11-24 01:35:02,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 23:07:55] 2025-11-24 01:35:02,147 | INFO     | did not find any defunct processes belonging to 1541658
[2025-11-23 23:07:55] 2025-11-24 01:35:02,160 | INFO     | did not find any defunct processes belonging to 1541658
[2025-11-23 23:07:55] 2025-11-24 01:35:02,161 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 23:07:55] 2025-11-24 01:35:02,161 | INFO     | ready for new job
[2025-11-23 23:07:55] 2025-11-24 01:35:02,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 23:07:55] 2025-11-24 01:35:02,168 | INFO     | ***************************************
[2025-11-23 23:07:55] 2025-11-24 01:35:02,168 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 23:07:55] 2025-11-24 01:35:02,168 | INFO     | ***************************************
[2025-11-23 23:07:55] 2025-11-24 01:35:02,169 | INFO     | 
[2025-11-23 23:07:55] 2025-11-24 01:35:02,171 | INFO     | architecture information:
[2025-11-23 23:07:55] 2025-11-24 01:35:02,171 | INFO     | executing command: cat /etc/os-release
[2025-11-23 23:07:55] 2025-11-24 01:35:02,283 | INFO     | cat /etc/os-release:
[2025-11-23 23:07:55] NAME="CentOS Linux"
[2025-11-23 23:07:55] VERSION="7 (Core)"
[2025-11-23 23:07:55] ID="centos"
[2025-11-23 23:07:55] ID_LIKE="rhel fedora"
[2025-11-23 23:07:55] VERSION_ID="7"
[2025-11-23 23:07:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 23:07:55] ANSI_COLOR="0;31"
[2025-11-23 23:07:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 23:07:55] HOME_URL="https://www.centos.org/"
[2025-11-23 23:07:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 23:07:55] 
[2025-11-23 23:07:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 23:07:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 23:07:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 23:07:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 23:07:55] 
[2025-11-23 23:07:55] 2025-11-24 01:35:02,284 | INFO     | ***************************************
[2025-11-23 23:07:55] 2025-11-24 01:35:02,797 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 23:07:55] 2025-11-24 01:35:03,045 | INFO     | sufficient remaining disk space (48861544448 B)
[2025-11-23 23:07:55] 2025-11-24 01:35:03,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 23:07:55] 2025-11-24 01:35:03,045 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 23:07:55] 2025-11-24 01:35:03,045 | INFO     | update_server=False
[2025-11-23 23:07:55] 2025-11-24 01:35:03,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 23:07:55] 2025-11-24 01:35:03,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 23:07:55] 2025-11-24 01:35:03,407 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 23:07:55] 2025-11-24 01:35:03,407 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 23:07:55] 2025-11-24 01:35:03,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:07:55] 2025-11-24 01:35:03,408 | INFO     | will abort loop
[2025-11-23 23:07:55] 2025-11-24 01:35:03,848 | INFO     | all data control threads have been joined
[2025-11-23 23:07:55] 2025-11-24 01:35:04,051 | INFO     | [job] retrieve thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:04,062 | INFO     | all payload control threads have been joined
[2025-11-23 23:07:55] 2025-11-24 01:35:04,210 | INFO     | [data] copytool_in thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:04,220 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:04,228 | INFO     | [job] validate thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:04,259 | INFO     | all job control threads have been joined
[2025-11-23 23:07:55] 2025-11-24 01:35:04,413 | INFO     | [job] job monitor thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:04,674 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:04,854 | INFO     | [data] control thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:05,016 | INFO     | [payload] validate_post thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:05,068 | INFO     | [payload] control thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:05,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 23:07:55] 2025-11-24 01:35:05,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:07:55] 2025-11-24 01:35:05,265 | INFO     | [job] control thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:05,373 | INFO     | [data] copytool_out thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:05,457 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:05,482 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:05,608 | INFO     | [payload] failed_post thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:06,249 | INFO     | [job] queue monitor thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:09,083 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 23:07:55] 2025-11-24 01:35:33,653 | INFO     | PID=1535222 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 23:07:55] 2025-11-24 01:35:33,654 | INFO     | .. there are 8 such processes running
[2025-11-23 23:07:55] 2025-11-24 01:35:33,655 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 23:07:55] 2025-11-24 01:35:33,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 23:07:55] 2025-11-24 01:35:33,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 23:07:55] 2025-11-24 01:35:35,781 | INFO     | [monitor] cgroup control has ended
[2025-11-23 23:07:55] 2025-11-24 01:35:37,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139788649281344)>', '<ExcThread(monitor, started 139788006967040)>']
[2025-11-23 23:07:55] 2025-11-24 01:35:37,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 23:07:55] 2025-11-24 01:35:37,678 | INFO     | [monitor] control thread has ended
[2025-11-23 23:07:55] 2025-11-24 01:35:42,297 | INFO     | all workflow threads have been joined
[2025-11-23 23:07:55] 2025-11-24 01:35:42,297 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 23:07:55] 2025-11-24 01:35:42,298 | INFO     | traces error code: 0
[2025-11-23 23:07:55] 2025-11-24 01:35:42,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 23:07:55] 2025-11-24 01:35:42,575 [wrapper] ==== pilot stdout END ====
[2025-11-23 23:07:55] 2025-11-24 01:35:42,579 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 23:07:55] 2025-11-24 01:35:42,583 [wrapper] pilotpid: 1535222
[2025-11-23 23:07:55] 2025-11-24 01:35:42,587 [wrapper] Pilot exit status: 0
[2025-11-23 23:07:55] 2025-11-24 01:35:42,606 [wrapper] pandaids: 6895327504
[2025-11-23 23:07:55] 2025-11-24 01:35:42,659 [wrapper] cleanup supervisor_pilot 3225678 1535223
[2025-11-23 23:07:55] 2025-11-24 01:35:42,663 [wrapper] Test setup, not cleaning
[2025-11-23 23:07:55] 2025-11-24 01:35:42,667 [wrapper] apfmon messages muted
[2025-11-23 23:07:55] 2025-11-24 01:35:42,671 [wrapper] ==== wrapper stdout END ====
[2025-11-23 23:07:55] 2025-11-24 01:35:42,675 [wrapper] ==== wrapper stderr END ====
[2025-11-23 23:07:55]  *** Error codes and diagnostics ***
[2025-11-23 23:07:55]     "exeErrorCode": 0,
[2025-11-23 23:07:55]     "exeErrorDiag": "",
[2025-11-23 23:07:55]     "pilotErrorCode": 0,
[2025-11-23 23:07:55]     "pilotErrorDiag": "",
[2025-11-23 23:07:55]  *** Listing of results directory ***
[2025-11-23 23:07:55] total 1334612
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 10:53 pilot3.tar.gz
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 11:01 queuedata.json
[2025-11-23 23:07:55] -rwx------. 1 boincer umatlas     36292 Nov 21 11:02 runpilot2-wrapper.sh
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas       100 Nov 23 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 23:07:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 00:04 run_atlas
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas       105 Nov 23 00:04 job.xml
[2025-11-23 23:07:55] -rw-r--r--. 2 boincer umatlas 411035025 Nov 23 00:04 EVNT.47483658._000054.pool.root.1
[2025-11-23 23:07:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:04 start_atlas.sh
[2025-11-23 23:07:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 00:04 shared
[2025-11-23 23:07:55] -rw-r--r--. 2 boincer umatlas    590105 Nov 23 00:04 input.tar.gz
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas         0 Nov 23 00:04 boinc_lockfile
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 00:04 pandaJob.out
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas        57 Nov 23 00:04 setup.sh.local
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas    989784 Nov 23 00:04 agis_schedconf.cvmfs.json
[2025-11-23 23:07:55] drwx------. 5 boincer umatlas      4096 Nov 23 00:04 pilot3
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas       533 Nov 23 20:09 boinc_task_state.xml
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas 927163440 Nov 23 20:33 HITS.47556137._000538.pool.root.1
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas      1055 Nov 23 20:34 memory_monitor_summary.json
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas   1526164 Nov 23 20:34 agis_ddmendpoints.agis.ALL.json
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas   2734795 Nov 23 20:34 log.47556137._000538.job.log.tgz.1
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas      8617 Nov 23 20:34 heartbeat.json
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas        95 Nov 23 20:35 pilot_heartbeat.json
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas      5009 Nov 23 20:35 pilotlog.txt
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas   9525917 Nov 23 20:35 log.47556137._000538.job.log.1
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas       353 Nov 23 20:35 output.list
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas       620 Nov 23 20:35 runtime_log
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas  12277760 Nov 23 20:35 result.tar.gz
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas      9345 Nov 23 20:35 runtime_log.err
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas       660 Nov 23 20:35 Gb7MDmelig8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmciHKDmUU3ugm.diag
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas      6659 Nov 23 23:01 init_data.xml
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 23:07 boinc_mmap_file
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas        29 Nov 23 23:07 wrapper_checkpoint.txt
[2025-11-23 23:07:55] -rw-r--r--. 1 boincer umatlas     21310 Nov 23 23:07 stderr.txt
[2025-11-23 23:07:55] HITS file was successfully produced:
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas 927163440 Nov 23 20:33 shared/HITS.pool.root.1
[2025-11-23 23:07:55]  *** Contents of shared directory: ***
[2025-11-23 23:07:55] total 1319432
[2025-11-23 23:07:55] -rw-r--r--. 2 boincer umatlas 411035025 Nov 23 00:04 ATLAS.root_0
[2025-11-23 23:07:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 00:04 start_atlas.sh
[2025-11-23 23:07:55] -rw-r--r--. 2 boincer umatlas    590105 Nov 23 00:04 input.tar.gz
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas 927163440 Nov 23 20:33 HITS.pool.root.1
[2025-11-23 23:07:55] -rw-------. 1 boincer umatlas  12277760 Nov 23 20:35 result.tar.gz
23:07:57 (1531560): run_atlas exited; CPU time 305574.549266
23:07:57 (1531560): called boinc_finish(0)

</stderr_txt>
]]>

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