Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:01:26 (1309444): wrapper (7.7.26015): starting
08:01:26 (1309444): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 08:01:26] Arguments: --nthreads 3
[2025-11-25 08:01:26] Threads: 3
[2025-11-25 08:01:26] Checking for CVMFS
[2025-11-25 08:01:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:01:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:01:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:01:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:01:26] 2.9.2.0 46827 9515 89476 153273 0 81 34114978 36864001 0 130560 0 3532277 99.924 501454 7171 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 08:01:26] CVMFS is ok
[2025-11-25 08:01:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:01:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:01:26] Further information can be found at the LHC@home message board.
[2025-11-25 08:01:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:01:26] Checking for apptainer binary...
[2025-11-25 08:01:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:01:26] Running /usr/bin/apptainer --version
[2025-11-25 08:01:26] apptainer version 1.4.1-1.1
[2025-11-25 08:01:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:01:26] magicA252
[2025-11-25 08:01:26] apptainer works
[2025-11-25 08:01:26] Set ATHENA_PROC_NUMBER=3
[2025-11-25 08:01:26] Set ATHENA_CORE_NUMBER=3
[2025-11-25 08:01:26] Starting ATLAS job with PandaID=6894281030
[2025-11-25 08:01:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 16:04:32]  *** The last 200 lines of the pilot log: ***
[2025-11-25 16:04:32] ANSI_COLOR="0;31"
[2025-11-25 16:04:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 16:04:32] HOME_URL="https://www.centos.org/"
[2025-11-25 16:04:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 16:04:32] 
[2025-11-25 16:04:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 16:04:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 16:04:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 16:04:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 16:04:32] 
[2025-11-25 16:04:32] 2025-11-25 15:04:01,896 | INFO     | ***************************************
[2025-11-25 16:04:32] 2025-11-25 15:04:02,397 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 16:04:32] 2025-11-25 15:04:02,409 | INFO     | sufficient remaining disk space (367313027072 B)
[2025-11-25 16:04:32] 2025-11-25 15:04:02,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 16:04:32] 2025-11-25 15:04:02,410 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 16:04:32] 2025-11-25 15:04:02,410 | INFO     | update_server=False
[2025-11-25 16:04:32] 2025-11-25 15:04:02,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 16:04:32] 2025-11-25 15:04:02,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:04:32] 2025-11-25 15:04:02,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:04:32] 2025-11-25 15:04:02,410 | INFO     | aborting loop
[2025-11-25 16:04:32] 2025-11-25 15:04:02,410 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 16:04:32] 2025-11-25 15:04:02,695 | INFO     | all payload control threads have been joined
[2025-11-25 16:04:32] 2025-11-25 15:04:02,796 | INFO     | all job control threads have been joined
[2025-11-25 16:04:32] 2025-11-25 15:04:03,352 | INFO     | all data control threads have been joined
[2025-11-25 16:04:32] 2025-11-25 15:04:03,411 | INFO     | [job] queue monitor thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:03,415 | INFO     | [job] retrieve thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:03,415 | INFO     | [job] job monitor thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:03,701 | INFO     | [payload] control thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:03,802 | INFO     | [job] control thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:03,838 | INFO     | [payload] validate_post thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:04,357 | INFO     | [data] control thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:04,386 | INFO     | [payload] failed_post thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:04,416 | INFO     | [data] copytool_out thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:04,577 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:04,577 | INFO     | [data] copytool_in thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:04,595 | INFO     | [job] validate thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:04,628 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:04,709 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:04,983 | INFO     | [monitor] cgroup control has ended
[2025-11-25 16:04:32] 2025-11-25 15:04:05,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 16:04:32] 2025-11-25 15:04:09,877 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:12,534 | INFO     | job.realtimelogging is not enabled
[2025-11-25 16:04:32] 2025-11-25 15:04:13,539 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 16:04:32] 2025-11-25 15:04:14,325 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364252006208)>', '<ExcThread(monitor, started 140363465475840)>']
[2025-11-25 16:04:32] 2025-11-25 15:04:19,344 | INFO     | all workflow threads have been joined
[2025-11-25 16:04:32] 2025-11-25 15:04:19,344 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 16:04:32] 2025-11-25 15:04:19,344 | INFO     | traces error code: 0
[2025-11-25 16:04:32] 2025-11-25 15:04:19,344 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 16:04:32] 2025-11-25 15:04:32,416 | INFO     | PID=1313176 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 16:04:32] 2025-11-25 15:04:32,416 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 16:04:32] 2025-11-25 15:04:32,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 16:04:32] 2025-11-25 15:04:32,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 16:04:32] 2025-11-25 15:04:32,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 16:04:32] 2025-11-25 15:04:32,416 | CRITICAL | thread 'MainThread' is not alive
[2025-11-25 16:04:32] 2025-11-25 15:04:32,416 | INFO     | [monitor] control thread has ended
[2025-11-25 16:04:32] 2025-11-25 15:04:32,462 [wrapper] ==== pilot stdout END ====
[2025-11-25 16:04:32] 2025-11-25 15:04:32,465 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 16:04:32] 2025-11-25 15:04:32,468 [wrapper] pilotpid: 1313176
[2025-11-25 16:04:32] 2025-11-25 15:04:32,470 [wrapper] Pilot exit status: 0
[2025-11-25 16:04:32] 2025-11-25 15:04:32,478 [wrapper] pandaids: 6894281030
[2025-11-25 16:04:32] 2025-11-25 15:04:32,495 [wrapper] cleanup supervisor_pilot 1370940 1313177
[2025-11-25 16:04:32] 2025-11-25 15:04:32,497 [wrapper] Test setup, not cleaning
[2025-11-25 16:04:32] 2025-11-25 15:04:32,500 [wrapper] apfmon messages muted
[2025-11-25 16:04:32] 2025-11-25 15:04:32,502 [wrapper] ==== wrapper stdout END ====
[2025-11-25 16:04:32] 2025-11-25 15:04:32,505 [wrapper] ==== wrapper stderr END ====
[2025-11-25 16:04:32]  *** Error codes and diagnostics ***
[2025-11-25 16:04:32]     "exeErrorCode": 0,
[2025-11-25 16:04:32]     "exeErrorDiag": "",
[2025-11-25 16:04:32]     "pilotErrorCode": 0,
[2025-11-25 16:04:32]     "pilotErrorDiag": "",
[2025-11-25 16:04:32]  *** Listing of results directory ***
[2025-11-25 16:04:32] total 1325868
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc    576529 Nov 21 09:27 pilot3.tar.gz
[2025-11-25 16:04:32] -rwx------ 1 boinc boinc     36292 Nov 21 09:59 runpilot2-wrapper.sh
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc      5112 Nov 21 09:59 queuedata.json
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc       100 Nov 25 08:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 16:04:32] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 08:01 run_atlas
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc       105 Nov 25 08:01 job.xml
[2025-11-25 16:04:32] -rw-r--r-- 2 boinc boinc 409749615 Nov 25 08:01 EVNT.47493127._002337.pool.root.1
[2025-11-25 16:04:32] -rw-r--r-- 2 boinc boinc    590102 Nov 25 08:01 input.tar.gz
[2025-11-25 16:04:32] -rw-r--r-- 2 boinc boinc     15847 Nov 25 08:01 start_atlas.sh
[2025-11-25 16:04:32] drwxrwx--x 2 boinc boinc      4096 Nov 25 08:01 shared
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc         0 Nov 25 08:01 boinc_setup_complete
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc      6449 Nov 25 08:01 init_data.xml
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc         0 Nov 25 08:01 boinc_lockfile
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc      2786 Nov 25 08:01 pandaJob.out
[2025-11-25 16:04:32] -rw------- 1 boinc boinc    991801 Nov 25 08:01 agis_schedconf.cvmfs.json
[2025-11-25 16:04:32] drwx------ 5 boinc boinc      4096 Nov 25 08:01 pilot3
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc       532 Nov 25 16:00 boinc_task_state.xml
[2025-11-25 16:04:32] -rw------- 1 boinc boinc 933550007 Nov 25 16:03 HITS.47533967._003085.pool.root.1
[2025-11-25 16:04:32] -rw------- 1 boinc boinc      1025 Nov 25 16:03 memory_monitor_summary.json
[2025-11-25 16:04:32] -rw------- 1 boinc boinc   1516240 Nov 25 16:03 agis_ddmendpoints.agis.ALL.json
[2025-11-25 16:04:32] -rw------- 1 boinc boinc   1173722 Nov 25 16:03 log.47533967._003085.job.log.tgz.1
[2025-11-25 16:04:32] -rw------- 1 boinc boinc        95 Nov 25 16:03 pilot_heartbeat.json
[2025-11-25 16:04:32] -rw------- 1 boinc boinc      8564 Nov 25 16:04 heartbeat.json
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc      8192 Nov 25 16:04 boinc_mmap_file
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc        28 Nov 25 16:04 wrapper_checkpoint.txt
[2025-11-25 16:04:32] -rw------- 1 boinc boinc       817 Nov 25 16:04 pilotlog.txt
[2025-11-25 16:04:32] -rw------- 1 boinc boinc   4073809 Nov 25 16:04 log.47533967._003085.job.log.1
[2025-11-25 16:04:32] -rw------- 1 boinc boinc       353 Nov 25 16:04 output.list
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc       620 Nov 25 16:04 runtime_log
[2025-11-25 16:04:32] -rw------- 1 boinc boinc   5263360 Nov 25 16:04 result.tar.gz
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc      8913 Nov 25 16:04 runtime_log.err
[2025-11-25 16:04:32] -rw------- 1 boinc boinc       668 Nov 25 16:04 O03KDm79bg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdEJKDmrRSJon.diag
[2025-11-25 16:04:32] -rw-r--r-- 1 boinc boinc      8638 Nov 25 16:04 stderr.txt
[2025-11-25 16:04:32] HITS file was successfully produced:
[2025-11-25 16:04:32] -rw------- 1 boinc boinc 933550007 Nov 25 16:03 shared/HITS.pool.root.1
[2025-11-25 16:04:32]  *** Contents of shared directory: ***
[2025-11-25 16:04:32] total 1317560
[2025-11-25 16:04:32] -rw-r--r-- 2 boinc boinc 409749615 Nov 25 08:01 ATLAS.root_0
[2025-11-25 16:04:32] -rw-r--r-- 2 boinc boinc    590102 Nov 25 08:01 input.tar.gz
[2025-11-25 16:04:32] -rw-r--r-- 2 boinc boinc     15847 Nov 25 08:01 start_atlas.sh
[2025-11-25 16:04:32] -rw------- 1 boinc boinc 933550007 Nov 25 16:03 HITS.pool.root.1
[2025-11-25 16:04:32] -rw------- 1 boinc boinc   5263360 Nov 25 16:04 result.tar.gz
16:04:33 (1309444): run_atlas exited; CPU time 85414.122005
16:04:33 (1309444): called boinc_finish(0)

</stderr_txt>
]]>

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